ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast48d06 |
|---|---|
| Clone Library Name | barley_pub |
>RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA| binding protein SEB4) (CLL-associated antigen KW-5) Length = 216 Score = 52.8 bits (125), Expect = 4e-07 Identities = 24/49 (48%), Positives = 33/49 (67%) Frame = +2 Query: 299 ADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 + +D K+FV GL + T SLR F +GD+EEAVVI+D+ TG+SR Sbjct: 4 SQKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSR 52
>RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ssDNA binding| protein SEB4) Length = 237 Score = 52.4 bits (124), Expect = 5e-07 Identities = 24/47 (51%), Positives = 32/47 (68%) Frame = +2 Query: 305 RDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +D K+FV GL + T SLR F +GD+EEAVVI+D+ TG+SR Sbjct: 27 KDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSR 73
>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 407 Score = 50.1 bits (118), Expect = 3e-06 Identities = 21/41 (51%), Positives = 30/41 (73%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KLFV GL W T ++LR+ FS YG++ + V++ DKTT +SR Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSR 51
>MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 328 Score = 50.1 bits (118), Expect = 3e-06 Identities = 23/49 (46%), Positives = 33/49 (67%) Frame = +2 Query: 299 ADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 + DP K+F+ GL W+T+ DSLR FS +G++ E +V+ D TT RSR Sbjct: 16 SQHDPG--KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSR 62 Score = 36.6 bits (83), Expect = 0.031 Identities = 16/42 (38%), Positives = 27/42 (64%) Frame = +2 Query: 320 RKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +K+FV GL T + ++ F +G +E+A+++ DKTT R R Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHR 151
>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) (Proline-rich Vg1 mRNA-binding protein) Length = 360 Score = 50.1 bits (118), Expect = 3e-06 Identities = 21/41 (51%), Positives = 30/41 (73%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KLFV GL W T ++LR+ FS YG++ + V++ DKTT +SR Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSR 51
>MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 346 Score = 50.1 bits (118), Expect = 3e-06 Identities = 23/49 (46%), Positives = 33/49 (67%) Frame = +2 Query: 299 ADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 + DP K+F+ GL W+T+ DSLR FS +G++ E +V+ D TT RSR Sbjct: 16 SQHDPG--KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSR 62 Score = 36.6 bits (83), Expect = 0.031 Identities = 16/42 (38%), Positives = 27/42 (64%) Frame = +2 Query: 320 RKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +K+FV GL T + ++ F +G +E+A+++ DKTT R R Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHR 151
>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 406 Score = 50.1 bits (118), Expect = 3e-06 Identities = 21/41 (51%), Positives = 30/41 (73%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KLFV GL W T ++LR+ FS YG++ + V++ DKTT +SR Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSR 51
>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) Length = 172 Score = 48.9 bits (115), Expect = 6e-06 Identities = 22/41 (53%), Positives = 28/41 (68%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KLFV GL ++TN SL +FS YG + E VV+ D+ T RSR Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSR 47
>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 48.9 bits (115), Expect = 6e-06 Identities = 22/41 (53%), Positives = 28/41 (68%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KLFV GL ++TN SL +FS YG + E VV+ D+ T RSR Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSR 47
>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein| Length = 157 Score = 48.5 bits (114), Expect = 8e-06 Identities = 20/41 (48%), Positives = 29/41 (70%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 + FV GL W TN +SL FS +GD+ ++ +I+D+ TGRSR Sbjct: 7 RCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSR 47
>CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 47.8 bits (112), Expect = 1e-05 Identities = 21/41 (51%), Positives = 28/41 (68%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KLFV GL ++TN +L +FS YG + E VV+ D+ T RSR Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSR 47
>CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 47.8 bits (112), Expect = 1e-05 Identities = 21/41 (51%), Positives = 28/41 (68%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KLFV GL ++TN +L +FS YG + E VV+ D+ T RSR Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSR 47
>CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 47.8 bits (112), Expect = 1e-05 Identities = 21/41 (51%), Positives = 28/41 (68%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KLFV GL ++TN +L +FS YG + E VV+ D+ T RSR Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSR 47
>HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4 (Cleavage| factor IB) (CFIB) Length = 534 Score = 47.8 bits (112), Expect = 1e-05 Identities = 21/52 (40%), Positives = 30/52 (57%) Frame = +2 Query: 290 RAAADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 R+ AD K+F+ GL W+T D+LR F YG + + ++ D TGRSR Sbjct: 149 RSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSR 200 Score = 33.5 bits (75), Expect = 0.26 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = +2 Query: 302 DRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 D K+FV G+G + FS +G + +A ++ DK TG+SR Sbjct: 237 DEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSR 284
>SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nuclear| ribonucleoprotein 40) (HNRNP 40) Length = 344 Score = 47.4 bits (111), Expect = 2e-05 Identities = 26/51 (50%), Positives = 30/51 (58%) Frame = +2 Query: 293 AAADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 A+ RD RKLFV GL WET LR F YG++E V +D TGRSR Sbjct: 48 ASGQRDDD-RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSR 97
>GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochondrial| precursor (AtGRP2) Length = 158 Score = 47.0 bits (110), Expect = 2e-05 Identities = 22/41 (53%), Positives = 29/41 (70%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KLF+ GL W T+ SLR F+ +GD+ +A VI D+ TGRSR Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSR 76
>CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (xCIRP) Length = 163 Score = 46.6 bits (109), Expect = 3e-05 Identities = 21/41 (51%), Positives = 27/41 (65%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KLF+ GL +ETN D L F+ YG + E VV+ D+ T RSR Sbjct: 6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSR 46
>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein| Length = 157 Score = 46.2 bits (108), Expect = 4e-05 Identities = 23/51 (45%), Positives = 36/51 (70%) Frame = +2 Query: 293 AAADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 AAAD + + FV GL W T+++SL F++YG++ ++ VI+D+ TGRSR Sbjct: 2 AAADVE---YRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSR 49
>ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 45.8 bits (107), Expect = 5e-05 Identities = 23/43 (53%), Positives = 28/43 (65%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 LRKLF+ GL +ET DSLR F +G L + VV+ D T RSR Sbjct: 34 LRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSR 76 Score = 34.7 bits (78), Expect = 0.12 Identities = 15/43 (34%), Positives = 26/43 (60%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 ++K+FV G+ +T +LR F YG +E V+ D+ +G+ R Sbjct: 125 VKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKR 167
>ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 45.8 bits (107), Expect = 5e-05 Identities = 23/43 (53%), Positives = 28/43 (65%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 LRKLF+ GL +ET DSLR F +G L + VV+ D T RSR Sbjct: 34 LRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSR 76 Score = 34.7 bits (78), Expect = 0.12 Identities = 15/43 (34%), Positives = 26/43 (60%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 ++K+FV G+ +T +LR F YG +E V+ D+ +G+ R Sbjct: 125 VKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKR 167
>ROA3_HUMAN (P51991) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 378 Score = 45.8 bits (107), Expect = 5e-05 Identities = 23/43 (53%), Positives = 28/43 (65%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 LRKLF+ GL +ET DSLR F +G L + VV+ D T RSR Sbjct: 34 LRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSR 76 Score = 34.7 bits (78), Expect = 0.12 Identities = 15/43 (34%), Positives = 26/43 (60%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 ++K+FV G+ +T +LR F YG +E V+ D+ +G+ R Sbjct: 125 VKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKR 167
>RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 homolog 2| (hnRNP A3(B)) Length = 385 Score = 45.8 bits (107), Expect = 5e-05 Identities = 23/43 (53%), Positives = 28/43 (65%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 LRKLF+ GL +ET DSLR F +G L + VV+ D T RSR Sbjct: 26 LRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSR 68 Score = 34.3 bits (77), Expect = 0.15 Identities = 15/43 (34%), Positives = 25/43 (58%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 ++K+FV G+ +T LR F YG +E V+ D+ +G+ R Sbjct: 117 VKKIFVGGIKEDTEEYHLRDYFEGYGKIETIEVMEDRQSGKKR 159
>RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 homolog 1| (hnRNP A3(A)) Length = 373 Score = 45.8 bits (107), Expect = 5e-05 Identities = 23/43 (53%), Positives = 28/43 (65%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 LRKLF+ GL +ET DSLR F +G L + VV+ D T RSR Sbjct: 26 LRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSR 68 Score = 31.6 bits (70), Expect = 0.99 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 ++K+FV G+ +T LR +YG +E V+ D+ +G+ R Sbjct: 117 VKKIFVGGIKEDTEEYHLRDYSESYGKIETIEVMEDRQSGKKR 159
>ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) Length = 371 Score = 45.4 bits (106), Expect = 7e-05 Identities = 22/43 (51%), Positives = 29/43 (67%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 LRKLF+ GL +ET +SLR+ F +G L + VV+ D T RSR Sbjct: 12 LRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSR 54 Score = 33.9 bits (76), Expect = 0.20 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 ++K+FV G+ +T LR F YG +E +++D+ +G+ R Sbjct: 103 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKR 145
>ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (Unwinding protein 1) (UP1) (Fragment) Length = 195 Score = 45.4 bits (106), Expect = 7e-05 Identities = 22/43 (51%), Positives = 29/43 (67%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 LRKLF+ GL +ET +SLR+ F +G L + VV+ D T RSR Sbjct: 12 LRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSR 54 Score = 33.9 bits (76), Expect = 0.20 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 ++K+FV G+ +T LR F YG +E +++D+ +G+ R Sbjct: 103 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKR 145
>ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP) Length = 319 Score = 45.4 bits (106), Expect = 7e-05 Identities = 22/43 (51%), Positives = 29/43 (67%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 LRKLF+ GL +ET +SLR+ F +G L + VV+ D T RSR Sbjct: 12 LRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSR 54 Score = 33.9 bits (76), Expect = 0.20 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 ++K+FV G+ +T LR F YG +E +++D+ +G+ R Sbjct: 103 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKR 145
>ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) (HDP-1) (Topoisomerase-inhibitor suppressed) Length = 319 Score = 45.4 bits (106), Expect = 7e-05 Identities = 22/43 (51%), Positives = 29/43 (67%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 LRKLF+ GL +ET +SLR+ F +G L + VV+ D T RSR Sbjct: 12 LRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSR 54 Score = 33.9 bits (76), Expect = 0.20 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 ++K+FV G+ +T LR F YG +E +++D+ +G+ R Sbjct: 103 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKR 145
>ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 319 Score = 45.4 bits (106), Expect = 7e-05 Identities = 22/43 (51%), Positives = 29/43 (67%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 LRKLF+ GL +ET +SLR+ F +G L + VV+ D T RSR Sbjct: 12 LRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSR 54 Score = 33.9 bits (76), Expect = 0.20 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 ++K+FV G+ +T LR F YG +E +++D+ +G+ R Sbjct: 103 VKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKR 145
>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)| Length = 169 Score = 44.7 bits (104), Expect = 1e-04 Identities = 18/41 (43%), Positives = 29/41 (70%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 + FV GL W TN + L+ FS +GD+ ++ +I+D+ +GRSR Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSR 47
>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A| Length = 169 Score = 44.3 bits (103), Expect = 1e-04 Identities = 19/41 (46%), Positives = 28/41 (68%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 + FV GL W T+ SL FS +G+L ++ +I+D+ TGRSR Sbjct: 9 RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSR 49
>RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C (Hrb27-C)| (hnRNP 48) (HRP48.1) Length = 421 Score = 43.9 bits (102), Expect = 2e-04 Identities = 19/41 (46%), Positives = 27/41 (65%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KLFV GL WET ++L F +GD+ + VV+ + +GRSR Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSR 48 Score = 30.4 bits (67), Expect = 2.2 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 K+F+ GL LR F+ YG + E V++ D+ +SR Sbjct: 97 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSR 137
>GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2| Length = 168 Score = 43.5 bits (101), Expect = 3e-04 Identities = 22/51 (43%), Positives = 34/51 (66%) Frame = +2 Query: 293 AAADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 AAAD + + FV GL W TN+++L F+ +G + ++ VI+D+ TGRSR Sbjct: 2 AAADVE---YRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSR 49
>ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 homolog (hnRNP| A1) (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 365 Score = 43.5 bits (101), Expect = 3e-04 Identities = 22/50 (44%), Positives = 30/50 (60%) Frame = +2 Query: 296 AADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 A + LRKLF+ GL +ET +SLR F +G L + VV+ D + RSR Sbjct: 6 APNEPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSR 55 Score = 37.0 bits (84), Expect = 0.024 Identities = 15/43 (34%), Positives = 27/43 (62%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 ++K+FV G+ +T D LR F YG +E +++D+ +G+ R Sbjct: 104 VKKIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKR 146
>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7| Length = 176 Score = 43.5 bits (101), Expect = 3e-04 Identities = 18/41 (43%), Positives = 28/41 (68%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 + FV GL W T+ +L F+ YGD+ ++ +I+D+ TGRSR Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSR 49
>MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 43.1 bits (100), Expect = 3e-04 Identities = 17/41 (41%), Positives = 27/41 (65%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 K+F+ GL W+T + LR F +G+++E +V+ D T RSR Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSR 61 Score = 36.2 bits (82), Expect = 0.040 Identities = 15/42 (35%), Positives = 27/42 (64%) Frame = +2 Query: 320 RKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +K+FV GL T + ++ F +G +++A+++ DKTT R R Sbjct: 109 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHR 150
>MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 43.1 bits (100), Expect = 3e-04 Identities = 17/41 (41%), Positives = 27/41 (65%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 K+F+ GL W+T + LR F +G+++E +V+ D T RSR Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSR 61 Score = 36.2 bits (82), Expect = 0.040 Identities = 15/42 (35%), Positives = 27/42 (64%) Frame = +2 Query: 320 RKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +K+FV GL T + ++ F +G +++A+++ DKTT R R Sbjct: 109 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHR 150
>MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 43.1 bits (100), Expect = 3e-04 Identities = 17/41 (41%), Positives = 27/41 (65%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 K+F+ GL W+T + LR F +G+++E +V+ D T RSR Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSR 61 Score = 36.6 bits (83), Expect = 0.031 Identities = 15/42 (35%), Positives = 27/42 (64%) Frame = +2 Query: 320 RKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +K+FV GL T + ++ F +G +++A+++ DKTT R R Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHR 150
>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A| Length = 166 Score = 43.1 bits (100), Expect = 3e-04 Identities = 18/41 (43%), Positives = 28/41 (68%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 + FV GL W T+ +L FS YG++ ++ +I+D+ TGRSR Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSR 49
>RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F (HRP36.1| protein) (Protein P11) Length = 385 Score = 43.1 bits (100), Expect = 3e-04 Identities = 20/43 (46%), Positives = 28/43 (65%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 LRKLF+ GL + T D L+A F +G++ + VV+ D T RSR Sbjct: 23 LRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSR 65 Score = 35.8 bits (81), Expect = 0.053 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 ++KLFV GL + + + LR F +G + ++SDK TG+ R Sbjct: 114 VKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKR 156
>HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 42.7 bits (99), Expect = 4e-04 Identities = 18/41 (43%), Positives = 27/41 (65%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KLF+ GL ETN +L A+F YG + E +++ D+ T +SR Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSR 49
>HNRPG_HUMAN (P38159) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) (Glycoprotein p43) Length = 391 Score = 42.4 bits (98), Expect = 6e-04 Identities = 18/41 (43%), Positives = 27/41 (65%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KLF+ GL ETN +L A+F YG + E +++ D+ T +SR Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSR 49
>ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1| Length = 346 Score = 42.0 bits (97), Expect = 7e-04 Identities = 19/43 (44%), Positives = 28/43 (65%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 LRK+FV GL T D +R +S +G++ + +V+ D TT RSR Sbjct: 22 LRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSR 64
>HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 42.0 bits (97), Expect = 7e-04 Identities = 18/41 (43%), Positives = 27/41 (65%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KLF+ GL ETN +L A+F YG + E +++ D+ T +SR Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSR 49
>RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 homolog 2| (hnRNP A2(B)) Length = 358 Score = 41.6 bits (96), Expect = 0.001 Identities = 19/42 (45%), Positives = 27/42 (64%) Frame = +2 Query: 320 RKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 RKLF+ GL +ET +SLR + +G L + VV+ D + RSR Sbjct: 9 RKLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSR 50 Score = 38.9 bits (89), Expect = 0.006 Identities = 17/43 (39%), Positives = 26/43 (60%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 ++KLFV G+ +T LR F YG +E +I+DK +G+ R Sbjct: 99 VKKLFVGGIKEDTEEHHLREYFEEYGKIESTEIITDKQSGKKR 141
>RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) (RNPL) Length = 157 Score = 41.2 bits (95), Expect = 0.001 Identities = 19/41 (46%), Positives = 27/41 (65%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KLFV GL + T+ +L FS++G + E VV+ D+ T RSR Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSR 47
>ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (hnRNP core| protein A1-A) (PEN repeat clone P9) Length = 365 Score = 41.2 bits (95), Expect = 0.001 Identities = 18/43 (41%), Positives = 29/43 (67%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +RKLF+ GL + T ++L+A F +G++ + VV+ D T RSR Sbjct: 30 MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSR 72 Score = 32.0 bits (71), Expect = 0.76 Identities = 14/43 (32%), Positives = 26/43 (60%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 ++KLFV L + + S+R F +G++ + ++ DK TG+ R Sbjct: 121 VKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKR 163
>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) Length = 153 Score = 41.2 bits (95), Expect = 0.001 Identities = 19/41 (46%), Positives = 27/41 (65%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KLFV GL + T+ +L FS++G + E VV+ D+ T RSR Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSR 47
>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1| Length = 841 Score = 40.8 bits (94), Expect = 0.002 Identities = 16/41 (39%), Positives = 27/41 (65%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +LF+R + +E + + R++FS YG LEE + D TG+S+ Sbjct: 311 RLFIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSK 351
>RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 homolog 1| (hnRNP A2(A)) Length = 346 Score = 40.8 bits (94), Expect = 0.002 Identities = 19/42 (45%), Positives = 27/42 (64%) Frame = +2 Query: 320 RKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 RKLF+ GL +ET +SLR + +G L + VV+ D + RSR Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSR 50 Score = 37.4 bits (85), Expect = 0.018 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 ++KLFV G+ +T LR F YG ++ +I+DK +G+ R Sbjct: 99 VKKLFVGGIKEDTEEHHLREYFEEYGKIDSIEIITDKQSGKKR 141
>ROA2_HUMAN (P22626) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /| hnRNP B1) Length = 353 Score = 40.8 bits (94), Expect = 0.002 Identities = 19/42 (45%), Positives = 27/42 (64%) Frame = +2 Query: 320 RKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 RKLF+ GL +ET +SLR + +G L + VV+ D + RSR Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSR 62 Score = 35.4 bits (80), Expect = 0.069 Identities = 15/43 (34%), Positives = 26/43 (60%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 ++KLFV G+ +T LR F YG ++ +I+D+ +G+ R Sbjct: 111 VKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKR 153
>HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 353 Score = 40.8 bits (94), Expect = 0.002 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 K+F+ GL W+T L+ FS +GD+ + + D TGRSR Sbjct: 96 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSR 136
>ROA2_MOUSE (O88569) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /| hnRNP B1) Length = 341 Score = 40.8 bits (94), Expect = 0.002 Identities = 19/42 (45%), Positives = 27/42 (64%) Frame = +2 Query: 320 RKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 RKLF+ GL +ET +SLR + +G L + VV+ D + RSR Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSR 50 Score = 35.4 bits (80), Expect = 0.069 Identities = 15/43 (34%), Positives = 26/43 (60%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 ++KLFV G+ +T LR F YG ++ +I+D+ +G+ R Sbjct: 99 VKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKR 141
>ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (APOBEC-1-binding protein 1) (ABBP-1) Length = 331 Score = 40.4 bits (93), Expect = 0.002 Identities = 16/41 (39%), Positives = 26/41 (63%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 K+FV GL W+T+ L+ F+ +G++ + + D TGRSR Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSR 109
>ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (CArG-binding factor-A) (CBF-A) Length = 285 Score = 40.4 bits (93), Expect = 0.002 Identities = 16/41 (39%), Positives = 26/41 (63%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 K+FV GL W+T+ L+ F+ +G++ + + D TGRSR Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSR 116
>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog| Length = 342 Score = 40.4 bits (93), Expect = 0.002 Identities = 18/43 (41%), Positives = 28/43 (65%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +RKLF+ GL + T +SL+ F +G++ + VV+ D T RSR Sbjct: 16 VRKLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSR 58 Score = 34.7 bits (78), Expect = 0.12 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 ++KLFV G+ E + LR F YG + A ++ DK T + R Sbjct: 107 VKKLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKR 149
>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10| Length = 169 Score = 40.4 bits (93), Expect = 0.002 Identities = 17/41 (41%), Positives = 26/41 (63%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 + FV GL W T L FS +G++ ++ +I+D+ TGRSR Sbjct: 7 RCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSR 47
>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3) (AtRBP33) (RNA-binding protein cp31) Length = 329 Score = 40.0 bits (92), Expect = 0.003 Identities = 21/52 (40%), Positives = 32/52 (61%) Frame = +2 Query: 290 RAAADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 RA +PA R ++V L W+ ++ L +FS +G + EA V+ D+ TGRSR Sbjct: 235 RAPRVYEPAFR-VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSR 285
>HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 355 Score = 40.0 bits (92), Expect = 0.003 Identities = 20/51 (39%), Positives = 30/51 (58%) Frame = +2 Query: 293 AAADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 AAA R+ K+F+ GL W+T L+ FS +G++ + + D TGRSR Sbjct: 90 AAAQREEW--KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSR 138
>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)| Length = 233 Score = 39.7 bits (91), Expect = 0.004 Identities = 19/48 (39%), Positives = 31/48 (64%) Frame = +2 Query: 302 DRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 D +P+ R ++V L W+ ++ L +FS +G + A V+SD+ TGRSR Sbjct: 144 DFEPSCR-VYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSR 190 Score = 35.8 bits (81), Expect = 0.053 Identities = 20/45 (44%), Positives = 27/45 (60%) Frame = +2 Query: 311 PALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 P KLFV L ++ +S+ L IF A G +E A VI ++ T RSR Sbjct: 52 PEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSR 96
>HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 355 Score = 39.3 bits (90), Expect = 0.005 Identities = 16/41 (39%), Positives = 25/41 (60%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 K+F+ GL W+T L+ FS +G++ + + D TGRSR Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSR 138
>RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, family 1 member| A1 (RNA-binding motif protein 1) Length = 496 Score = 38.9 bits (89), Expect = 0.006 Identities = 16/37 (43%), Positives = 25/37 (67%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTT 433 KLF+ GL ETN L+A+F +G + E ++I D+T+ Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTS 45
>PPIL4_USTMA (P0C196) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 551 Score = 38.1 bits (87), Expect = 0.011 Identities = 26/84 (30%), Positives = 35/84 (41%) Frame = +2 Query: 191 DDVLRLLDPLSRDQLXXXXXXXXXXXXXXXXXXRAAADRDPALRKLFVRGLGWETNSDSL 370 +DV +DP S++++ A+ P LFV L T SD L Sbjct: 219 EDVHSDVDPASKEEMRRNADTNAAALTLEMVGDLPFAEIRPPENILFVCKLNPVTRSDDL 278 Query: 371 RAIFSAYGDLEEAVVISDKTTGRS 442 IFS +G + VI DK TG S Sbjct: 279 ELIFSRFGKILSCEVIKDKKTGDS 302
>MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing protein 1| Length = 838 Score = 38.1 bits (87), Expect = 0.011 Identities = 18/51 (35%), Positives = 30/51 (58%) Frame = +2 Query: 293 AAADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 AA + A +LF+R + ++ + + +FS YG+LEE V D TG+S+ Sbjct: 292 AALTKIRATGRLFLRNILYDATEEDFKQLFSPYGELEEVHVAVDTRTGQSK 342
>ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0)| Length = 305 Score = 37.7 bits (86), Expect = 0.014 Identities = 19/43 (44%), Positives = 26/43 (60%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 L KLF+ GL +T+ LR F A+G L + VV+ + T RSR Sbjct: 6 LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSR 48 Score = 35.4 bits (80), Expect = 0.069 Identities = 17/43 (39%), Positives = 27/43 (62%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 ++KLFV GL + L FS +G +E+A +I+DK +G+ R Sbjct: 97 VKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKR 139
>MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing protein 1| Length = 878 Score = 37.7 bits (86), Expect = 0.014 Identities = 16/41 (39%), Positives = 25/41 (60%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +LF+R + + D R +FS YG+LEE + D TG+S+ Sbjct: 331 RLFLRNILYTATEDDFRKLFSPYGELEEVHIAVDTRTGQSK 371
>RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial precursor| Length = 212 Score = 37.4 bits (85), Expect = 0.018 Identities = 18/41 (43%), Positives = 28/41 (68%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KL++ GL T+ SL+ FS++ + EA V+++K TGRSR Sbjct: 32 KLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSR 72
>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein cp29) Length = 342 Score = 37.4 bits (85), Expect = 0.018 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KLFV L + +S L +F + G++E VI DK TGRSR Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSR 140 Score = 32.7 bits (73), Expect = 0.45 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +L+V L W + +L +F+ G + EA VI D+ +GRS+ Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSK 298
>ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)| Length = 273 Score = 37.0 bits (84), Expect = 0.024 Identities = 15/41 (36%), Positives = 26/41 (63%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +++V L W + D+L +FS G + +A V+ D+ +GRSR Sbjct: 189 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSR 229 Score = 35.0 bits (79), Expect = 0.090 Identities = 18/41 (43%), Positives = 25/41 (60%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 K+FV L + +S +L +F G++E VI DK TGRSR Sbjct: 88 KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSR 128
>ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)| Length = 279 Score = 37.0 bits (84), Expect = 0.024 Identities = 15/41 (36%), Positives = 26/41 (63%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +++V L W + D+L +FS G + +A V+ D+ +GRSR Sbjct: 195 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSR 235 Score = 34.3 bits (77), Expect = 0.15 Identities = 18/41 (43%), Positives = 25/41 (60%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 K+FV L + +S +L +F G++E VI DK TGRSR Sbjct: 88 KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSR 128
>BOLL_MOUSE (Q924M5) Protein boule-like| Length = 281 Score = 36.6 bits (83), Expect = 0.031 Identities = 13/35 (37%), Positives = 25/35 (71%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDK 427 ++FV G+ ++TN + LR FS YG ++E +++D+ Sbjct: 34 RIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDR 68
>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast| precursor Length = 289 Score = 36.2 bits (82), Expect = 0.040 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KLFV L + +S L +F + G++E VI DK TGRSR Sbjct: 92 KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSR 132 Score = 33.9 bits (76), Expect = 0.20 Identities = 15/41 (36%), Positives = 26/41 (63%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +++V L W + +L ++FS G + EA VI D+ +GRS+ Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSK 245
>BOLL_MACFA (Q8WP23) Protein boule-like| Length = 283 Score = 36.2 bits (82), Expect = 0.040 Identities = 13/35 (37%), Positives = 24/35 (68%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDK 427 ++FV G+ ++TN LR FS YG ++E +++D+ Sbjct: 34 RIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDR 68
>BOLL_HUMAN (Q8N9W6) Protein boule-like| Length = 283 Score = 36.2 bits (82), Expect = 0.040 Identities = 13/35 (37%), Positives = 24/35 (68%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDK 427 ++FV G+ ++TN LR FS YG ++E +++D+ Sbjct: 34 RIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDR 68
>RB97D_DROME (Q02926) Ribonucleoprotein RB97D| Length = 471 Score = 36.2 bits (82), Expect = 0.040 Identities = 17/52 (32%), Positives = 32/52 (61%) Frame = +2 Query: 290 RAAADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 R + + + +++KLFV GL + + LR F +G++ +++DKTTG+ R Sbjct: 113 RESRETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRR 164 Score = 36.2 bits (82), Expect = 0.040 Identities = 17/43 (39%), Positives = 26/43 (60%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 LRKLF+ GL T ++L+ + +G + + VV+ D T RSR Sbjct: 31 LRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSR 73
>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)| Length = 291 Score = 36.2 bits (82), Expect = 0.040 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KLFV L + +S +L +F G++E VI DK TGRSR Sbjct: 88 KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSR 128 Score = 34.3 bits (77), Expect = 0.15 Identities = 14/41 (34%), Positives = 27/41 (65%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +++V L W + +L+ +FS G++ +A V+ D+ +GRSR Sbjct: 208 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSR 248
>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 668 Score = 36.2 bits (82), Expect = 0.040 Identities = 18/53 (33%), Positives = 30/53 (56%) Frame = +2 Query: 290 RAAADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSRA 448 R+ + P+ ++V+ L E D L+ F YGD+ AVV+ D+ +G SR+ Sbjct: 215 RSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQ-SGNSRS 266
>RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, chloroplast| precursor (PSRP-2) Length = 260 Score = 35.8 bits (81), Expect = 0.053 Identities = 18/42 (42%), Positives = 26/42 (61%) Frame = +2 Query: 320 RKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 R+L+V + N+D LR I +G +E A V+ DK +GRSR Sbjct: 84 RRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSR 125
>MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing protein 1| Length = 861 Score = 35.8 bits (81), Expect = 0.053 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +LF+R + + + D + +FS YG+L+E V D TG S+ Sbjct: 326 RLFLRNILYSSTEDDFKKLFSPYGELKEVHVAVDTRTGNSK 366
>MRD1_CRYNE (Q5KJL5) Multiple RNA-binding domain-containing protein 1| Length = 769 Score = 35.8 bits (81), Expect = 0.053 Identities = 18/43 (41%), Positives = 26/43 (60%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSRAT 451 +LFVR L + T S+SL + FS YG ++E + +TTG T Sbjct: 222 RLFVRNLAFITTSESLSSHFSTYGRIDECHLPVSQTTGEPLGT 264
>MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing protein 1| Length = 887 Score = 35.4 bits (80), Expect = 0.069 Identities = 15/41 (36%), Positives = 26/41 (63%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +LF+R + + + + R +FS +G+LEE V D TG+S+ Sbjct: 346 RLFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSK 386
>RU17_DROME (P17133) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) Length = 448 Score = 34.7 bits (78), Expect = 0.12 Identities = 16/49 (32%), Positives = 29/49 (59%) Frame = +2 Query: 299 ADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 A DP R LF+ + ++T+ LR F YG +++ V+I D+ +G+ + Sbjct: 96 ATEDP-FRTLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPK 143
>TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)| Length = 281 Score = 34.7 bits (78), Expect = 0.12 Identities = 19/40 (47%), Positives = 22/40 (55%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 L V GL T LR +FS YG L V+ D+ TGRSR Sbjct: 119 LGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSR 158
>TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)| Length = 282 Score = 34.7 bits (78), Expect = 0.12 Identities = 19/40 (47%), Positives = 22/40 (55%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 L V GL T LR +FS YG L V+ D+ TGRSR Sbjct: 121 LGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSR 160
>ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)| Length = 292 Score = 34.3 bits (77), Expect = 0.15 Identities = 14/41 (34%), Positives = 27/41 (65%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +++V L W + +L+ +FS G++ +A V+ D+ +GRSR Sbjct: 209 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSR 249 Score = 34.3 bits (77), Expect = 0.15 Identities = 18/41 (43%), Positives = 25/41 (60%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KLFV L + +S +L +F G++E VI DK +GRSR Sbjct: 89 KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSR 129
>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2| Length = 326 Score = 34.3 bits (77), Expect = 0.15 Identities = 14/40 (35%), Positives = 24/40 (60%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +FV GL +E + +FS YG++ ++ DK TG+S+ Sbjct: 38 IFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSK 77
>NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NOP77)| Length = 685 Score = 33.5 bits (75), Expect = 0.26 Identities = 14/42 (33%), Positives = 27/42 (64%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSRAT 451 +FVR + ++ +SL FS +G ++ A+ + DK+TG ++ T Sbjct: 292 VFVRNVPYDATEESLAPHFSKFGSVKYALPVIDKSTGLAKGT 333 Score = 29.3 bits (64), Expect = 4.9 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = +2 Query: 317 LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 ++ LFVR + + + L FS + ++ AVV+ D T RSR Sbjct: 25 MKTLFVRSIPQDVTDEQLADFFSNFAPIKHAVVVKD-TNKRSR 66
>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor| Length = 324 Score = 33.5 bits (75), Expect = 0.26 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KL+V L W S LR F+ A VI D+++GRSR Sbjct: 218 KLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSR 258
>MRD1_EMENI (Q5BGA9) Multiple RNA-binding domain-containing protein 1| Length = 819 Score = 33.5 bits (75), Expect = 0.26 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISD 424 +LFVR L +ET L +FS +G +EE V D Sbjct: 296 RLFVRNLSYETKESELEPVFSPFGKIEEIHVAFD 329
>CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 616 Score = 33.1 bits (74), Expect = 0.34 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 4/53 (7%) Frame = +2 Query: 299 ADRDPA----LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 A RDPA LR +FV + +E + L+ IFS G + ++ D+ TG+ + Sbjct: 5 AVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPK 57
>RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2| Length = 322 Score = 33.1 bits (74), Expect = 0.34 Identities = 13/40 (32%), Positives = 24/40 (60%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +F+ GL +E + +FS YG++ ++ DK TG+S+ Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSK 77
>CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 632 Score = 33.1 bits (74), Expect = 0.34 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 4/53 (7%) Frame = +2 Query: 299 ADRDPA----LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 A RDPA LR +FV + +E + L+ IFS G + ++ D+ TG+ + Sbjct: 5 AVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPK 57
>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)| Length = 276 Score = 33.1 bits (74), Expect = 0.34 Identities = 13/41 (31%), Positives = 25/41 (60%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +++V + W+ + L +FS +G + A V+ D+ +GRSR Sbjct: 192 RIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSR 232 Score = 31.6 bits (70), Expect = 0.99 Identities = 17/41 (41%), Positives = 25/41 (60%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KLFV L ++ +S+ L +F G +E A VI ++ T RSR Sbjct: 98 KLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSR 138
>ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor| Length = 315 Score = 32.7 bits (73), Expect = 0.45 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +++V + W + L +FS +G + A V+ D+ TGRSR Sbjct: 231 RIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSR 271
>CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 32.3 bits (72), Expect = 0.58 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%) Frame = +2 Query: 305 RDPA----LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 RDPA LR +FV + +E + L+ IFS G + ++ D+ TG+ + Sbjct: 7 RDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPK 57
>CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 32.3 bits (72), Expect = 0.58 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%) Frame = +2 Query: 305 RDPA----LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 RDPA LR +FV + +E + L+ IFS G + ++ D+ TG+ + Sbjct: 7 RDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPK 57
>CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 572 Score = 32.3 bits (72), Expect = 0.58 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%) Frame = +2 Query: 305 RDPA----LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 RDPA LR +FV + +E + L+ IFS G + ++ D+ TG+ + Sbjct: 7 RDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPK 57
>CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 580 Score = 32.3 bits (72), Expect = 0.58 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%) Frame = +2 Query: 305 RDPA----LRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 RDPA LR +FV + +E + L+ IFS G + ++ D+ TG+ + Sbjct: 7 RDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPK 57
>SXL_MUSDO (O17310) Sex-lethal homolog| Length = 324 Score = 32.0 bits (71), Expect = 0.76 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 L+V L D L IF YG++ + ++ DK TGR R Sbjct: 190 LYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPR 229
>RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 952 Score = 32.0 bits (71), Expect = 0.76 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +LFVR L + ++ + L +FSAYG L E D T + + Sbjct: 401 RLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPK 441
>MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing protein 1| Length = 828 Score = 31.6 bits (70), Expect = 0.99 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +LF+R L + + R +FS YG+LEE + + TG+ + Sbjct: 302 RLFLRNLLYTAKEEDFRQLFSQYGELEEVHLPINTKTGQCK 342
>ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC)| Length = 367 Score = 31.6 bits (70), Expect = 0.99 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = +2 Query: 308 DPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRS 442 D + L V L D +++F + GD+E ++ DK TG+S Sbjct: 35 DDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 79
>ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (Paraneoplastic| cerebellar degeneration-associated antigen) (Paraneoplastic limbic encephalitis antigen 21) Length = 367 Score = 31.6 bits (70), Expect = 0.99 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = +2 Query: 308 DPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRS 442 D + L V L D +++F + GD+E ++ DK TG+S Sbjct: 35 DDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQS 79
>SXL_DROSU (Q24668) Protein sex-lethal| Length = 354 Score = 31.2 bits (69), Expect = 1.3 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 L+V L D L IF YG + + ++ DK TGR R Sbjct: 215 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPR 254
>SXL_DROME (P19339) Protein sex-lethal| Length = 354 Score = 31.2 bits (69), Expect = 1.3 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 L+V L D L IF YG + + ++ DK TGR R Sbjct: 213 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPR 252
>DRBP1_RAT (Q8CFD1) Developmentally-regulated RNA-binding protein 1| Length = 476 Score = 31.2 bits (69), Expect = 1.3 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = +2 Query: 308 DPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 D L ++FV T D LR F YGD+E VI +K TG S+ Sbjct: 117 DEELTRIFVMIPKSYTEED-LREKFKVYGDIEYCSVIKNKVTGESK 161
>TRA2_DROME (P19018) Transformer-2 sex-determining protein| Length = 264 Score = 31.2 bits (69), Expect = 1.3 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = +2 Query: 314 ALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 A R + V GL T+ +R +F+ YG +E ++ D T RSR Sbjct: 95 ASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSR 138
>RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA| Length = 101 Score = 31.2 bits (69), Expect = 1.3 Identities = 12/40 (30%), Positives = 24/40 (60%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 ++V L ++ + L A+F+ YG ++ + +D+ TGR R Sbjct: 3 IYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMR 42
>PPIL4_MOUSE (Q9CXG3) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) (Cyclophilin-like protein PPIL4) Length = 492 Score = 31.2 bits (69), Expect = 1.3 Identities = 19/48 (39%), Positives = 22/48 (45%) Frame = +2 Query: 299 ADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRS 442 AD P LFV L T + L IFS +G + VI D TG S Sbjct: 233 ADIKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGES 280
>PPIL4_HUMAN (Q8WUA2) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) (Cyclophilin-like protein PPIL4) Length = 492 Score = 31.2 bits (69), Expect = 1.3 Identities = 19/48 (39%), Positives = 22/48 (45%) Frame = +2 Query: 299 ADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRS 442 AD P LFV L T + L IFS +G + VI D TG S Sbjct: 233 ADIKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGES 280
>PPIL4_ASPFU (Q4WAQ9) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 459 Score = 31.2 bits (69), Expect = 1.3 Identities = 19/48 (39%), Positives = 24/48 (50%) Frame = +2 Query: 299 ADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRS 442 A+ P LFV L T + L+ IFS +G + VI DK TG S Sbjct: 241 AEVKPPENVLFVCKLNPVTQDEDLQLIFSRFGPILSCEVIRDKRTGDS 288
>PPIL4_EMENI (Q5ARI5) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 461 Score = 30.8 bits (68), Expect = 1.7 Identities = 19/48 (39%), Positives = 23/48 (47%) Frame = +2 Query: 299 ADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRS 442 A+ P LFV L T + L IFS +G + VI DK TG S Sbjct: 241 AEVKPPENVLFVCKLNPVTQDEDLELIFSRFGKILSCEVIRDKRTGDS 288
>PPIL4_ASPOR (Q2U256) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 461 Score = 30.8 bits (68), Expect = 1.7 Identities = 19/48 (39%), Positives = 23/48 (47%) Frame = +2 Query: 299 ADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRS 442 A+ P LFV L T + L IFS +G + VI DK TG S Sbjct: 241 AEVKPPENVLFVCKLNPVTQDEDLHLIFSRFGTILSCEVIRDKRTGDS 288
>MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing protein 1| Length = 825 Score = 30.8 bits (68), Expect = 1.7 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +LFVR L ++ + L +FS +G +EE V D + S+ Sbjct: 302 RLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSK 342
>DRBP1_MOUSE (Q8BHN5) Developmentally-regulated RNA-binding protein 1 (RB-1)| Length = 476 Score = 30.8 bits (68), Expect = 1.7 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +2 Query: 308 DPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 D L ++FV T D LR F YGD+E +I +K TG S+ Sbjct: 117 DEELTRIFVMIPKSYTEED-LREKFKVYGDIEYCSIIKNKVTGESK 161
>DRBP1_HUMAN (Q8IUH3) Developmentally-regulated RNA-binding protein 1 (RB-1)| Length = 476 Score = 30.8 bits (68), Expect = 1.7 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +2 Query: 308 DPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 D L ++FV T D LR F YGD+E +I +K TG S+ Sbjct: 117 DEELTRIFVMIPKSYTEED-LREKFKVYGDIEYCSIIKNKVTGESK 161
>RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 471 Score = 30.8 bits (68), Expect = 1.7 Identities = 13/44 (29%), Positives = 24/44 (54%) Frame = +2 Query: 314 ALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 A + LFV + ++T LR F YG ++ ++ +K +G+ R Sbjct: 101 AFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPR 144
>SXL_CHRRU (O97018) Sex-lethal homolog| Length = 307 Score = 30.8 bits (68), Expect = 1.7 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 L+V L D L IF YG++ + ++ DK TG+ R Sbjct: 173 LYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPR 212
>EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (Embryonic| poly(A) binding protein-B) (ePABP-B) (ePAB-B) (XePABP-B) Length = 629 Score = 30.8 bits (68), Expect = 1.7 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 5/52 (9%) Frame = +2 Query: 299 ADRDPALRK-----LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGR 439 + RDP LRK +F++ L ++ +L FSA+GD+ V+ D+ R Sbjct: 87 SQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYGSR 138
>BOULE_DROME (Q24207) Protein boule| Length = 228 Score = 30.4 bits (67), Expect = 2.2 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDK 427 ++FV G+ +T L +FSAYG ++ +I D+ Sbjct: 34 RIFVGGISGDTTEADLTRVFSAYGTVKSTKIIVDR 68
>U2AF2_MOUSE (P26369) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor| 65 kDa subunit) (U2 snRNP auxiliary factor large subunit) Length = 475 Score = 30.4 bits (67), Expect = 2.2 Identities = 13/41 (31%), Positives = 24/41 (58%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KLF+ GL N D ++ + +++G L+ ++ D TG S+ Sbjct: 260 KLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSK 300
>U2AF2_HUMAN (P26368) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor| 65 kDa subunit) (U2 snRNP auxiliary factor large subunit) (hU2AF(65)) Length = 475 Score = 30.4 bits (67), Expect = 2.2 Identities = 13/41 (31%), Positives = 24/41 (58%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KLF+ GL N D ++ + +++G L+ ++ D TG S+ Sbjct: 260 KLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSK 300
>RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U1 SNRNP 70| kDa) (snRNP70) Length = 448 Score = 30.4 bits (67), Expect = 2.2 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = +2 Query: 314 ALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 A + LFV + ++T LR F YG ++ ++ K +G+ R Sbjct: 101 AFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPR 144
>RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 437 Score = 30.4 bits (67), Expect = 2.2 Identities = 13/44 (29%), Positives = 23/44 (52%) Frame = +2 Query: 314 ALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 A + LFV + ++T LR F YG ++ ++ K +G+ R Sbjct: 101 AFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPR 144
>TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (RA301) Length = 288 Score = 30.4 bits (67), Expect = 2.2 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 L V GL T LR +FS YG + + ++ D+ + RSR Sbjct: 120 LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSR 159
>TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (Silica-induced gene 41 protein) (SIG-41) Length = 288 Score = 30.4 bits (67), Expect = 2.2 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 L V GL T LR +FS YG + + ++ D+ + RSR Sbjct: 120 LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSR 159
>TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) Length = 288 Score = 30.4 bits (67), Expect = 2.2 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 L V GL T LR +FS YG + + ++ D+ + RSR Sbjct: 120 LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSR 159
>PPIL4_SCHPO (Q9UUE4) Peptidyl-prolyl cis-trans isomerase cyp6 (EC 5.2.1.8)| (PPIase cyp6) (Rotamase cyp8) Length = 432 Score = 30.0 bits (66), Expect = 2.9 Identities = 18/44 (40%), Positives = 21/44 (47%) Frame = +2 Query: 311 PALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRS 442 P LFV L T + L IFS +G + VI DK TG S Sbjct: 241 PPENVLFVCKLNPVTQDEDLELIFSRFGKIISCQVIRDKETGDS 284
>DAZL_CHICK (Q804A9) Deleted in azoospermia-like (DAZ-like protein)| Length = 289 Score = 30.0 bits (66), Expect = 2.9 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKT 430 +FV G+ N +R+ F YG ++E +I+D+T Sbjct: 38 VFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDRT 72
>FUSIP_MOUSE (Q9R0U0) FUS-interacting serine-arginine-rich protein 1| (TLS-associated protein with Ser-Arg repeats) (TLS-associated protein with SR repeats) (TASR) (TLS-associated serine-arginine protein) (TLS-associated SR protein) (Neural-specific SR pro Length = 262 Score = 30.0 bits (66), Expect = 2.9 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +2 Query: 311 PALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 P LFVR + +T S+ LR F YG + + V D T R R Sbjct: 7 PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPR 51
>FUSIP_HUMAN (O75494) FUS-interacting serine-arginine-rich protein 1| (TLS-associated protein with Ser-Arg repeats) (TLS-associated protein with SR repeats) (TASR) (TLS-associated serine-arginine protein) (TLS-associated SR protein) (40 kDa SR-repressor pr Length = 262 Score = 30.0 bits (66), Expect = 2.9 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +2 Query: 311 PALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 P LFVR + +T S+ LR F YG + + V D T R R Sbjct: 7 PPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPR 51
>RBM28_MOUSE (Q8CGC6) RNA-binding protein 28 (RNA-binding motif protein 28)| Length = 749 Score = 29.6 bits (65), Expect = 3.8 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +L +R L ++ + D L+A+F+ YG + E V I K G+ R Sbjct: 114 RLIIRNLSFKCSEDDLKAVFTHYGTVLE-VNIPKKPDGKMR 153
>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)| Length = 142 Score = 29.6 bits (65), Expect = 3.8 Identities = 13/28 (46%), Positives = 20/28 (71%) Frame = +2 Query: 362 DSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +SL + FS YG++ E+ +I D+ T RSR Sbjct: 1 NSLHSAFSTYGEVLESKIILDRETQRSR 28
>RBM4_BRARE (Q6IQ97) RNA-binding protein 4 (RNA-binding motif protein 4)| Length = 419 Score = 29.6 bits (65), Expect = 3.8 Identities = 11/34 (32%), Positives = 21/34 (61%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISD 424 K+FV L T ++ +R++FS YG + E ++ + Sbjct: 3 KIFVGNLSPNTTAEEIRSLFSQYGKISECDIVKN 36
>DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 295 Score = 29.6 bits (65), Expect = 3.8 Identities = 11/35 (31%), Positives = 22/35 (62%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKT 430 +FV G+ + +R+ F+ YG ++E +I+D+T Sbjct: 42 VFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRT 76
>DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) (DAZ homolog) (SPGY-like-autosomal) Length = 295 Score = 29.6 bits (65), Expect = 3.8 Identities = 11/35 (31%), Positives = 22/35 (62%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKT 430 +FV G+ + +R+ F+ YG ++E +I+D+T Sbjct: 42 VFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRT 76
>PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 653 Score = 29.6 bits (65), Expect = 3.8 Identities = 14/40 (35%), Positives = 27/40 (67%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 LF++ L E + + L+A FSA+G + A +++D+ G+S+ Sbjct: 366 LFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDE-QGKSK 404
>DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 298 Score = 29.6 bits (65), Expect = 3.8 Identities = 11/35 (31%), Positives = 22/35 (62%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKT 430 +FV G+ + +R+ F+ YG ++E +I+D+T Sbjct: 42 VFVGGIDVRMDETEIRSFFARYGSVKEVKIITDRT 76
>RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 427 Score = 29.3 bits (64), Expect = 4.9 Identities = 13/49 (26%), Positives = 28/49 (57%) Frame = +2 Query: 299 ADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 A DP + LFV L +E++ ++ F +YG ++ +++D+ T + + Sbjct: 132 ATGDP-YKTLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPK 179
>IF34_MOUSE (Q9Z1D1) Eukaryotic translation initiation factor 3 subunit 4| (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (Eif3p42) (eIF3g) Length = 320 Score = 29.3 bits (64), Expect = 4.9 Identities = 15/49 (30%), Positives = 25/49 (51%) Frame = +2 Query: 299 ADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 AD + +R V L +T L+ +F +G + + DKTTG+S+ Sbjct: 235 ADDNATIR---VTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSK 280
>IF34_HUMAN (O75821) Eukaryotic translation initiation factor 3 subunit 4| (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (eIF3g) Length = 320 Score = 29.3 bits (64), Expect = 4.9 Identities = 15/49 (30%), Positives = 25/49 (51%) Frame = +2 Query: 299 ADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 AD + +R V L +T L+ +F +G + + DKTTG+S+ Sbjct: 235 ADDNATIR---VTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSK 280
>FCA_ARATH (O04425) Flowering time control protein FCA| Length = 747 Score = 29.3 bits (64), Expect = 4.9 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 KLFV + + +R F +G++ E +I DK TG+ + Sbjct: 121 KLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQ 161
>DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 296 Score = 29.3 bits (64), Expect = 4.9 Identities = 11/35 (31%), Positives = 21/35 (60%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKT 430 +FV G+ + +R F+ YG ++E +I+D+T Sbjct: 42 VFVGGIDVRMDETEIRGFFARYGSVKEVKIITDRT 76
>EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Embryonic poly(A)| binding protein) (ePABP) Length = 629 Score = 29.3 bits (64), Expect = 4.9 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 ++++ G + + LR IFSA+G+ V+ D TGRSR Sbjct: 193 VYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMD-DTGRSR 231
>PPIL4_NEUCR (Q871A4) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) Length = 494 Score = 29.3 bits (64), Expect = 4.9 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = +2 Query: 299 ADRDPALRKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRS 442 A+ P LFV L T + L IFS +G + VI D+ TG S Sbjct: 246 AEVKPPENVLFVCKLNPVTTDEDLELIFSRFGKILSCEVIRDQKTGDS 293
>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 960 Score = 28.9 bits (63), Expect = 6.4 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +LFVR L + + + L +FS YG L E D T + + Sbjct: 403 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPK 443
>LARK_DROME (Q94901) RNA-binding protein lark| Length = 352 Score = 28.9 bits (63), Expect = 6.4 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISD 424 KLF+ L +T + LRA+F YG + E V+ + Sbjct: 8 KLFIGNLDEKTQATELRALFEKYGTVVECDVVKN 41
>NUCL_CHICK (P15771) Nucleolin (Protein C23)| Length = 694 Score = 28.9 bits (63), Expect = 6.4 Identities = 16/42 (38%), Positives = 26/42 (61%) Frame = +2 Query: 320 RKLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 + LFVRGL +T ++LR F G + A +++D+ TG S+ Sbjct: 553 KTLFVRGLSEDTTEETLRESFE--GSI-SARIVTDRDTGSSK 591
>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) (Testis-specific poly(A)-binding protein) Length = 631 Score = 28.9 bits (63), Expect = 6.4 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 5/48 (10%) Frame = +2 Query: 299 ADRDPALRK-----LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDK 427 + RDP+LRK +FV+ L N+ +L SA+G++ V+ D+ Sbjct: 87 SQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDE 134
>SXL_CERCA (O61374) Sex-lethal homolog (CCSXL)| Length = 348 Score = 28.9 bits (63), Expect = 6.4 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 L+V L D L IF YG + + ++ DK TG+ R Sbjct: 198 LYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPR 237
>HAM1_METCA (Q602P0) HAM1 protein homolog| Length = 201 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = -2 Query: 424 VADDHGLLEVAVGGEDGAERVGVGLPAEAPDEELAQGRVAVGG 296 +ADD GL A+GGE G PA + D+ + + A+ G Sbjct: 67 IADDSGLEVDALGGEPGVHSARYAGPAASDDDNIDRLLAALDG 109
>PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 28.5 bits (62), Expect = 8.4 Identities = 13/40 (32%), Positives = 24/40 (60%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +FV+ +G + + + L+ +F YG E VI D +G+S+ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSK 239
>PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 28.5 bits (62), Expect = 8.4 Identities = 13/40 (32%), Positives = 24/40 (60%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +FV+ +G + + + L+ +F YG E VI D +G+S+ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSK 239
>PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 28.5 bits (62), Expect = 8.4 Identities = 13/40 (32%), Positives = 24/40 (60%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +FV+ +G + + + L+ +F YG E VI D +G+S+ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSK 239
>PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 28.5 bits (62), Expect = 8.4 Identities = 13/40 (32%), Positives = 24/40 (60%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +FV+ +G + + + L+ +F YG E VI D +G+S+ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSK 239
>PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 28.5 bits (62), Expect = 8.4 Identities = 13/40 (32%), Positives = 24/40 (60%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +FV+ +G + + + L+ +F YG E VI D +G+S+ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSK 239
>PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 28.5 bits (62), Expect = 8.4 Identities = 13/40 (32%), Positives = 24/40 (60%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +FV+ +G + + + L+ +F YG E VI D +G+S+ Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSK 239
>HRP65_CHITE (Q9U1N0) Hrp65 protein (Ct-Hrp65)| Length = 535 Score = 28.5 bits (62), Expect = 8.4 Identities = 10/35 (28%), Positives = 22/35 (62%) Frame = +2 Query: 323 KLFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDK 427 +L++ L + + L+ +FS YG++ EA + ++K Sbjct: 114 RLYIGNLTSDVTEEELKELFSPYGEISEAFINAEK 148
>PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PABP 2) Length = 629 Score = 28.5 bits (62), Expect = 8.4 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISD 424 ++V+ L T D L+ F YG + AVV+ D Sbjct: 217 VYVKNLAESTTDDDLKNAFGEYGKITSAVVMKD 249
>GAR2_SCHPO (P41891) Protein gar2| Length = 500 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = +2 Query: 326 LFVRGLGWETNSDSLRAIFSAYGDLEEAVVISDKTTGRSR 445 +FV L W + L F YG + A VI D +GRS+ Sbjct: 265 VFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSK 304 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,125,134 Number of Sequences: 219361 Number of extensions: 536412 Number of successful extensions: 2436 Number of sequences better than 10.0: 159 Number of HSP's better than 10.0 without gapping: 2313 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2432 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
