ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast48d02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF118226.1|AF118226 Hordeum vulgare high pI alpha-glucosidase (AGL97) gene, complete cds Length = 7113 Score = 735 bits (371), Expect = 0.0 Identities = 371/371 (100%) Strand = Plus / Plus Query: 8 cagggatccgcatcgacgcgacgtacgggacgttcgtccgcgggatgcagcaggacatct 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5582 cagggatccgcatcgacgcgacgtacgggacgttcgtccgcgggatgcagcaggacatct 5641 Query: 68 tcctgaagcggaacggcacaaacttcgtcggcaacgtgtggccgggcgacgtctacttcc 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5642 tcctgaagcggaacggcacaaacttcgtcggcaacgtgtggccgggcgacgtctacttcc 5701 Query: 128 cggacttcatgcacccgcgcgccgccgagttctgggcgcgggagatctccctcttccgcc 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5702 cggacttcatgcacccgcgcgccgccgagttctgggcgcgggagatctccctcttccgcc 5761 Query: 188 ggaccatccccgtcgacgggctgtggatcgacatgaacgagatctccaacttctacaacc 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5762 ggaccatccccgtcgacgggctgtggatcgacatgaacgagatctccaacttctacaacc 5821 Query: 248 cggagccgatgaacgcgctcgacgacccgccgtaccggatcaacaacgacggcacgggcc 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5822 cggagccgatgaacgcgctcgacgacccgccgtaccggatcaacaacgacggcacgggcc 5881 Query: 308 gccccatcaacaacaagacggtgccggcctccgccgtgcactacggcggcgtcaccgagt 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5882 gccccatcaacaacaagacggtgccggcctccgccgtgcactacggcggcgtcaccgagt 5941 Query: 368 acgacgcgcac 378 ||||||||||| Sbjct: 5942 acgacgcgcac 5952
>gb|U22450.1|HVU22450 Hordeum vulgare alpha-glucosidase mRNA, complete cds Length = 2738 Score = 593 bits (299), Expect = e-166 Identities = 343/355 (96%), Gaps = 2/355 (0%) Strand = Plus / Plus Query: 18 catcgacgcgacgtacgggacgttcgtccgcgggatgcagcaggacatcttcctgaagcg 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1151 catcgacgcgacgtacgggacgttcgtccgcgggatgcagcaggacatcttcctgaagcg 1210 Query: 78 gaacggcacaaacttcgtcggcaacgtgtggccgggcgacgtctacttcccggacttcat 137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1211 gaacggcacaaacttcgtcggcaacgtgtggccgggcgacgtctacttcccggacttcat 1270 Query: 138 gcacccgcgcgccgccgagttctgggcgcgggagatctccctcttccgccggaccatccc 197 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1271 gcacccagccgccgccgagttctgggcgcgggagatctccctcttccgccggaccatccc 1330 Query: 198 cgtcgacgggctgtggatcgacatgaacgagatctccaacttctacaacccggagccgat 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1331 ggtcgacgggctgtggatcgacatgaacgagatctccaacttctacaacccggagcccat 1390 Query: 258 gaacgcgctcgacgacccgccgtaccggatcaacaacgacggcacgggccgccccatcaa 317 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1391 gaacgcgctcgacgacccgccgtaccggatcaacaacgacgggacgggccgccccatcaa 1450 Query: 318 caacaagacggtgccggcctc-cgccgtgcactacggcggcgtcaccgagtacga 371 |||||||||||||| | || | ||||||||||||||| || |||||||||||||| Sbjct: 1451 caacaagacggtgc-gcccgctcgccgtgcactacgggggggtcaccgagtacga 1504
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 367 bits (185), Expect = 2e-98 Identities = 311/353 (88%) Strand = Plus / Minus Query: 26 cgacgtacgggacgttcgtccgcgggatgcagcaggacatcttcctgaagcggaacggca 85 |||||||||||||||||||||| || ||| |||||||||||||| ||||| ||||||| | Sbjct: 27663514 cgacgtacgggacgttcgtccggggaatgaagcaggacatcttcttgaagtggaacggga 27663455 Query: 86 caaacttcgtcggcaacgtgtggccgggcgacgtctacttcccggacttcatgcacccgc 145 |||| | ||||| ||||||||||| |||||||||||||||||||| | |||||| Sbjct: 27663454 gcaactacctcggcgtggtgtggccggggaacgtctacttcccggacttcctcaacccgc 27663395 Query: 146 gcgccgccgagttctgggcgcgggagatctccctcttccgccggaccatccccgtcgacg 205 |||||||||||||||||||||| |||||| || ||||| |||||| |||||||||||| Sbjct: 27663394 gcgccgccgagttctgggcgcgcgagatcgccgcgttccggcggaccctccccgtcgacg 27663335 Query: 206 ggctgtggatcgacatgaacgagatctccaacttctacaacccggagccgatgaacgcgc 265 |||||||| |||||||||||||||||||||||||| | ||||| |||| | |||||| Sbjct: 27663334 ggctgtgggtcgacatgaacgagatctccaacttcgtcgacccgccgccgctcaacgcga 27663275 Query: 266 tcgacgacccgccgtaccggatcaacaacgacggcacgggccgccccatcaacaacaaga 325 ||||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||| Sbjct: 27663274 tcgacgacccgccgtaccgcatcaacaactccggcgtgcgccgccccatcaacaacaaga 27663215 Query: 326 cggtgccggcctccgccgtgcactacggcggcgtcaccgagtacgacgcgcac 378 |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 27663214 cggtgccggcctccgccgtgcactacggcggcgtggccgagtacgacgcgcac 27663162 Score = 341 bits (172), Expect = 1e-90 Identities = 310/356 (87%) Strand = Plus / Plus Query: 23 acgcgacgtacgggacgttcgtccgcgggatgcagcaggacatcttcctgaagcggaacg 82 |||||||||||||||||||| |||| | ||| || ||||||||||| ||||| |||||| Sbjct: 27720520 acgcgacgtacgggacgttcatccgagcgatcaaggaggacatcttcttgaagtggaacg 27720579 Query: 83 gcacaaacttcgtcggcaacgtgtggccgggcgacgtctacttcccggacttcatgcacc 142 | | |||| | |||| ||||||||||| |||||| ||||||||||||| | ||| Sbjct: 27720580 ggagtaactacctcggtgtggtgtggccggggaacgtctccttcccggacttcctcaacc 27720639 Query: 143 cgcgcgccgccgagttctgggcgcgggagatctccctcttccgccggaccatccccgtcg 202 ||||||||||||||||||||||||| |||||| || ||||| |||||| ||||||||| Sbjct: 27720640 cgcgcgccgccgagttctgggcgcgcgagatcgccgcgttccggcggaccctccccgtcg 27720699 Query: 203 acgggctgtggatcgacatgaacgagatctccaacttctacaacccggagccgatgaacg 262 |||||||||||||||||||||||||||||||||||||| | ||||| |||| | |||| Sbjct: 27720700 acgggctgtggatcgacatgaacgagatctccaacttcgtcgacccgccgccgctcaacg 27720759 Query: 263 cgctcgacgacccgccgtaccggatcaacaacgacggcacgggccgccccatcaacaaca 322 |||||||||||||||||||||| ||| ||||| |||| | |||||||||||||||||| Sbjct: 27720760 cgctcgacgacccgccgtaccgcatcgacaactccggcgtgcgccgccccatcaacaaca 27720819 Query: 323 agacggtgccggcctccgccgtgcactacggcggcgtcaccgagtacgacgcgcac 378 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 27720820 agacggtgccggcctccgccgtgcactacggcggcgtggccgagtacgacgcgcac 27720875
>dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1153E06 Length = 174588 Score = 367 bits (185), Expect = 2e-98 Identities = 311/353 (88%) Strand = Plus / Minus Query: 26 cgacgtacgggacgttcgtccgcgggatgcagcaggacatcttcctgaagcggaacggca 85 |||||||||||||||||||||| || ||| |||||||||||||| ||||| ||||||| | Sbjct: 12769 cgacgtacgggacgttcgtccggggaatgaagcaggacatcttcttgaagtggaacggga 12710 Query: 86 caaacttcgtcggcaacgtgtggccgggcgacgtctacttcccggacttcatgcacccgc 145 |||| | ||||| ||||||||||| |||||||||||||||||||| | |||||| Sbjct: 12709 gcaactacctcggcgtggtgtggccggggaacgtctacttcccggacttcctcaacccgc 12650 Query: 146 gcgccgccgagttctgggcgcgggagatctccctcttccgccggaccatccccgtcgacg 205 |||||||||||||||||||||| |||||| || ||||| |||||| |||||||||||| Sbjct: 12649 gcgccgccgagttctgggcgcgcgagatcgccgcgttccggcggaccctccccgtcgacg 12590 Query: 206 ggctgtggatcgacatgaacgagatctccaacttctacaacccggagccgatgaacgcgc 265 |||||||| |||||||||||||||||||||||||| | ||||| |||| | |||||| Sbjct: 12589 ggctgtgggtcgacatgaacgagatctccaacttcgtcgacccgccgccgctcaacgcga 12530 Query: 266 tcgacgacccgccgtaccggatcaacaacgacggcacgggccgccccatcaacaacaaga 325 ||||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||| Sbjct: 12529 tcgacgacccgccgtaccgcatcaacaactccggcgtgcgccgccccatcaacaacaaga 12470 Query: 326 cggtgccggcctccgccgtgcactacggcggcgtcaccgagtacgacgcgcac 378 |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 12469 cggtgccggcctccgccgtgcactacggcggcgtggccgagtacgacgcgcac 12417 Score = 341 bits (172), Expect = 1e-90 Identities = 310/356 (87%) Strand = Plus / Plus Query: 23 acgcgacgtacgggacgttcgtccgcgggatgcagcaggacatcttcctgaagcggaacg 82 |||||||||||||||||||| |||| | ||| || ||||||||||| ||||| |||||| Sbjct: 69775 acgcgacgtacgggacgttcatccgagcgatcaaggaggacatcttcttgaagtggaacg 69834 Query: 83 gcacaaacttcgtcggcaacgtgtggccgggcgacgtctacttcccggacttcatgcacc 142 | | |||| | |||| ||||||||||| |||||| ||||||||||||| | ||| Sbjct: 69835 ggagtaactacctcggtgtggtgtggccggggaacgtctccttcccggacttcctcaacc 69894 Query: 143 cgcgcgccgccgagttctgggcgcgggagatctccctcttccgccggaccatccccgtcg 202 ||||||||||||||||||||||||| |||||| || ||||| |||||| ||||||||| Sbjct: 69895 cgcgcgccgccgagttctgggcgcgcgagatcgccgcgttccggcggaccctccccgtcg 69954 Query: 203 acgggctgtggatcgacatgaacgagatctccaacttctacaacccggagccgatgaacg 262 |||||||||||||||||||||||||||||||||||||| | ||||| |||| | |||| Sbjct: 69955 acgggctgtggatcgacatgaacgagatctccaacttcgtcgacccgccgccgctcaacg 70014 Query: 263 cgctcgacgacccgccgtaccggatcaacaacgacggcacgggccgccccatcaacaaca 322 |||||||||||||||||||||| ||| ||||| |||| | |||||||||||||||||| Sbjct: 70015 cgctcgacgacccgccgtaccgcatcgacaactccggcgtgcgccgccccatcaacaaca 70074 Query: 323 agacggtgccggcctccgccgtgcactacggcggcgtcaccgagtacgacgcgcac 378 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 70075 agacggtgccggcctccgccgtgcactacggcggcgtggccgagtacgacgcgcac 70130
>dbj|AK119824.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-D07, full insert sequence Length = 2829 Score = 359 bits (181), Expect = 4e-96 Identities = 310/353 (87%) Strand = Plus / Plus Query: 26 cgacgtacgggacgttcgtccgcgggatgcagcaggacatcttcctgaagcggaacggca 85 |||||||||||||||||||||| || ||| |||||||||||||| ||||| ||||||| | Sbjct: 1217 cgacgtacgggacgttcgtccggggaatgaagcaggacatcttcttgaagtggaacggga 1276 Query: 86 caaacttcgtcggcaacgtgtggccgggcgacgtctacttcccggacttcatgcacccgc 145 |||| | ||||| ||||||||||| |||||||||||||||||||| | |||||| Sbjct: 1277 gcaactacctcggcgtggtgtggccggggaacgtctacttcccggacttcctcaacccgc 1336 Query: 146 gcgccgccgagttctgggcgcgggagatctccctcttccgccggaccatccccgtcgacg 205 |||||||||||||||||||||| |||||| || ||||| |||||| |||||||||||| Sbjct: 1337 gcgccgccgagttctgggcgcgcgagatcgccgcgttccggcggaccctccccgtcgacg 1396 Query: 206 ggctgtggatcgacatgaacgagatctccaacttctacaacccggagccgatgaacgcgc 265 |||||||| ||||||||| |||||||||||||||| | ||||| |||| | |||||| Sbjct: 1397 ggctgtgggtcgacatgagcgagatctccaacttcgtcgacccgccgccgctcaacgcga 1456 Query: 266 tcgacgacccgccgtaccggatcaacaacgacggcacgggccgccccatcaacaacaaga 325 ||||||||||||||||||| ||||||||| |||| | ||||||||||||||||||||| Sbjct: 1457 tcgacgacccgccgtaccgcatcaacaactccggcgtgcgccgccccatcaacaacaaga 1516 Query: 326 cggtgccggcctccgccgtgcactacggcggcgtcaccgagtacgacgcgcac 378 |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1517 cggtgccggcctccgccgtgcactacggcggcgtggccgagtacgacgcgcac 1569
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710B08 Length = 186991 Score = 341 bits (172), Expect = 1e-90 Identities = 310/356 (87%) Strand = Plus / Plus Query: 23 acgcgacgtacgggacgttcgtccgcgggatgcagcaggacatcttcctgaagcggaacg 82 |||||||||||||||||||| |||| | ||| || ||||||||||| ||||| |||||| Sbjct: 23029 acgcgacgtacgggacgttcatccgagcgatcaaggaggacatcttcttgaagtggaacg 23088 Query: 83 gcacaaacttcgtcggcaacgtgtggccgggcgacgtctacttcccggacttcatgcacc 142 | | |||| | |||| ||||||||||| |||||| ||||||||||||| | ||| Sbjct: 23089 ggagtaactacctcggtgtggtgtggccggggaacgtctccttcccggacttcctcaacc 23148 Query: 143 cgcgcgccgccgagttctgggcgcgggagatctccctcttccgccggaccatccccgtcg 202 ||||||||||||||||||||||||| |||||| || ||||| |||||| ||||||||| Sbjct: 23149 cgcgcgccgccgagttctgggcgcgcgagatcgccgcgttccggcggaccctccccgtcg 23208 Query: 203 acgggctgtggatcgacatgaacgagatctccaacttctacaacccggagccgatgaacg 262 |||||||||||||||||||||||||||||||||||||| | ||||| |||| | |||| Sbjct: 23209 acgggctgtggatcgacatgaacgagatctccaacttcgtcgacccgccgccgctcaacg 23268 Query: 263 cgctcgacgacccgccgtaccggatcaacaacgacggcacgggccgccccatcaacaaca 322 |||||||||||||||||||||| ||| ||||| |||| | |||||||||||||||||| Sbjct: 23269 cgctcgacgacccgccgtaccgcatcgacaactccggcgtgcgccgccccatcaacaaca 23328 Query: 323 agacggtgccggcctccgccgtgcactacggcggcgtcaccgagtacgacgcgcac 378 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 23329 agacggtgccggcctccgccgtgcactacggcggcgtggccgagtacgacgcgcac 23384
>dbj|AK121588.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037N10, full insert sequence Length = 2804 Score = 341 bits (172), Expect = 1e-90 Identities = 310/356 (87%) Strand = Plus / Plus Query: 23 acgcgacgtacgggacgttcgtccgcgggatgcagcaggacatcttcctgaagcggaacg 82 |||||||||||||||||||| |||| | ||| || ||||||||||| ||||| |||||| Sbjct: 1192 acgcgacgtacgggacgttcatccgagcgatcaaggaggacatcttcttgaagtggaacg 1251 Query: 83 gcacaaacttcgtcggcaacgtgtggccgggcgacgtctacttcccggacttcatgcacc 142 | | |||| | |||| ||||||||||| |||||| ||||||||||||| | ||| Sbjct: 1252 ggagtaactacctcggtgtggtgtggccggggaacgtctccttcccggacttcctcaacc 1311 Query: 143 cgcgcgccgccgagttctgggcgcgggagatctccctcttccgccggaccatccccgtcg 202 ||||||||||||||||||||||||| |||||| || ||||| |||||| ||||||||| Sbjct: 1312 cgcgcgccgccgagttctgggcgcgcgagatcgccgcgttccggcggaccctccccgtcg 1371 Query: 203 acgggctgtggatcgacatgaacgagatctccaacttctacaacccggagccgatgaacg 262 |||||||||||||||||||||||||||||||||||||| | ||||| |||| | |||| Sbjct: 1372 acgggctgtggatcgacatgaacgagatctccaacttcgtcgacccgccgccgctcaacg 1431 Query: 263 cgctcgacgacccgccgtaccggatcaacaacgacggcacgggccgccccatcaacaaca 322 |||||||||||||||||||||| ||| ||||| |||| | |||||||||||||||||| Sbjct: 1432 cgctcgacgacccgccgtaccgcatcgacaactccggcgtgcgccgccccatcaacaaca 1491 Query: 323 agacggtgccggcctccgccgtgcactacggcggcgtcaccgagtacgacgcgcac 378 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1492 agacggtgccggcctccgccgtgcactacggcggcgtggccgagtacgacgcgcac 1547
>dbj|AK105449.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-B12, full insert sequence Length = 2873 Score = 341 bits (172), Expect = 1e-90 Identities = 310/356 (87%) Strand = Plus / Plus Query: 23 acgcgacgtacgggacgttcgtccgcgggatgcagcaggacatcttcctgaagcggaacg 82 |||||||||||||||||||| |||| | ||| || ||||||||||| ||||| |||||| Sbjct: 1260 acgcgacgtacgggacgttcatccgagcgatcaaggaggacatcttcttgaagtggaacg 1319 Query: 83 gcacaaacttcgtcggcaacgtgtggccgggcgacgtctacttcccggacttcatgcacc 142 | | |||| | |||| ||||||||||| |||||| ||||||||||||| | ||| Sbjct: 1320 ggagtaactacctcggtgtggtgtggccggggaacgtctccttcccggacttcctcaacc 1379 Query: 143 cgcgcgccgccgagttctgggcgcgggagatctccctcttccgccggaccatccccgtcg 202 ||||||||||||||||||||||||| |||||| || ||||| |||||| ||||||||| Sbjct: 1380 cgcgcgccgccgagttctgggcgcgcgagatcgccgcgttccggcggaccctccccgtcg 1439 Query: 203 acgggctgtggatcgacatgaacgagatctccaacttctacaacccggagccgatgaacg 262 |||||||||||||||||||||||||||||||||||||| | ||||| |||| | |||| Sbjct: 1440 acgggctgtggatcgacatgaacgagatctccaacttcgtcgacccgccgccgctcaacg 1499 Query: 263 cgctcgacgacccgccgtaccggatcaacaacgacggcacgggccgccccatcaacaaca 322 |||||||||||||||||||||| ||| ||||| |||| | |||||||||||||||||| Sbjct: 1500 cgctcgacgacccgccgtaccgcatcgacaactccggcgtgcgccgccccatcaacaaca 1559 Query: 323 agacggtgccggcctccgccgtgcactacggcggcgtcaccgagtacgacgcgcac 378 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1560 agacggtgccggcctccgccgtgcactacggcggcgtggccgagtacgacgcgcac 1615
>gb|BT019289.1| Zea mays clone Contig962.F mRNA sequence Length = 1946 Score = 327 bits (165), Expect = 1e-86 Identities = 324/377 (85%) Strand = Plus / Minus Query: 2 tagacccagggatccgcatcgacgcgacgtacgggacgttcgtccgcgggatgcagcagg 61 |||||||||||||| || | ||| ||| |||||||||| ||| || ||||||||||||| Sbjct: 1649 tagacccagggatcagcgtgaacgagacatacgggacgtacgtgcgagggatgcagcagg 1590 Query: 62 acatcttcctgaagcggaacggcacaaacttcgtcggcaacgtgtggccgggcgacgtct 121 || | |||||||||||||||||||| |||| | ||||||| |||||||| || |||||| Sbjct: 1589 acgtgttcctgaagcggaacggcaccaactacctcggcaaggtgtggcccgggtacgtct 1530 Query: 122 acttcccggacttcatgcacccgcgcgccgccgagttctgggcgcgggagatctccctct 181 |||||||||||||| | |||||||||||||||||||||||||||| |||||| |||| | Sbjct: 1529 acttcccggacttcctcaacccgcgcgccgccgagttctgggcgcgcgagatcgccctgt 1470 Query: 182 tccgccggaccatccccgtcgacgggctgtggatcgacatgaacgagatctccaacttct 241 |||| ||||| ||||||||||||| || |||||||||||||||||| ||||||||||| Sbjct: 1469 tccggcggacgctccccgtcgacggcctctggatcgacatgaacgaggtctccaacttcg 1410 Query: 242 acaacccggagccgatgaacgcgctcgacgacccgccgtaccggatcaacaacgacggca 301 | |||||| ||| | |||||||| ||||||||||||||||| ||||||||| |||| Sbjct: 1409 tcgacccggcgcccctcaacgcgctggacgacccgccgtaccgcatcaacaactccggcg 1350 Query: 302 cgggccgccccatcaacaacaagacggtgccggcctccgccgtgcactacggcggcgtca 361 | |||||||||||||||||||||| |||||| ||||| ||||||||||||||||| Sbjct: 1349 tgcgccgccccatcaacaacaagaccacgccggcgtccgcggtgcactacggcggcgtgc 1290 Query: 362 ccgagtacgacgcgcac 378 ||| |||||||||||| Sbjct: 1289 gcgactacgacgcgcac 1273
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 65.9 bits (33), Expect = 9e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 188 ggaccatccccgtcgacgggctgtggatcgacatgaacgagatctccaacttc 240 ||||| ||| |||||||||||||||| ||| |||||||||||||||| ||||| Sbjct: 134874 ggaccctcctcgtcgacgggctgtgggtcggcatgaacgagatctccgacttc 134822
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 65.9 bits (33), Expect = 9e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 188 ggaccatccccgtcgacgggctgtggatcgacatgaacgagatctccaacttc 240 ||||| ||| |||||||||||||||| ||| |||||||||||||||| ||||| Sbjct: 134874 ggaccctcctcgtcgacgggctgtgggtcggcatgaacgagatctccgacttc 134822
>emb|BX072548.4|CNS09S4R Oryza sativa chromosome 11, . BAC OSJNBa0029D01 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147503 Score = 65.9 bits (33), Expect = 9e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 188 ggaccatccccgtcgacgggctgtggatcgacatgaacgagatctccaacttc 240 ||||| ||| |||||||||||||||| ||| |||||||||||||||| ||||| Sbjct: 134874 ggaccctcctcgtcgacgggctgtgggtcggcatgaacgagatctccgacttc 134822
>gb|AF448201.1| Pinus pinaster putative alpha-xylosidase (XYL1) mRNA, complete cds Length = 2881 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 194 tccccgtcgacgggctgtggatcgacatgaacgagatctccaacttct 241 ||||||| ||||| || |||||||||||||||||||||||||| |||| Sbjct: 1292 tccccgtggacggtctctggatcgacatgaacgagatctccaatttct 1339
>gb|DQ490470.1| Emericella nidulans alpha-glucosidase (AN0941-2) mRNA, complete cds Length = 2625 Score = 46.1 bits (23), Expect = 0.082 Identities = 26/27 (96%) Strand = Plus / Plus Query: 202 gacgggctgtggatcgacatgaacgag 228 ||||| ||||||||||||||||||||| Sbjct: 1246 gacggcctgtggatcgacatgaacgag 1272
>ref|XM_653453.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0941.2), mRNA Length = 2520 Score = 46.1 bits (23), Expect = 0.082 Identities = 26/27 (96%) Strand = Plus / Plus Query: 202 gacgggctgtggatcgacatgaacgag 228 ||||| ||||||||||||||||||||| Sbjct: 1174 gacggcctgtggatcgacatgaacgag 1200
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 46.1 bits (23), Expect = 0.082 Identities = 26/27 (96%) Strand = Plus / Plus Query: 202 gacgggctgtggatcgacatgaacgag 228 ||||| ||||||||||||||||||||| Sbjct: 2879452 gacggcctgtggatcgacatgaacgag 2879478
>ref|XM_747898.1| Aspergillus fumigatus Af293 alpha-glucosidase B (Afu1g16250) partial mRNA Length = 2646 Score = 44.1 bits (22), Expect = 0.32 Identities = 37/42 (88%) Strand = Plus / Plus Query: 200 tcgacgggctgtggatcgacatgaacgagatctccaacttct 241 ||||||| ||||||||||| ||||||||| | ||||||||| Sbjct: 1247 tcgacggtctgtggatcgatatgaacgaggccgccaacttct 1288
>gb|AY373973.1| Helicoverpa armigera cathepsin L-like protease mRNA, complete cds Length = 1540 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 327 ggtgccggcctccgccgtgcac 348 |||||||||||||||||||||| Sbjct: 1185 ggtgccggcctccgccgtgcac 1206
>dbj|AB243675.1| Magnetospirillum sp. TS-6 bcl gene for benzoate-CoA ligase, complete cds Length = 1587 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 329 tgccggcctccgccgtgcactacggc 354 |||||||| ||||||||||||||||| Sbjct: 602 tgccggccaccgccgtgcactacggc 627
>ref|XM_550012.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1990 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 103 gtgtggccgggcgacgtctacttcccggacttc 135 |||||||| ||| ||||||||||||||||||| Sbjct: 1436 gtgtggcccggccccgtctacttcccggacttc 1404
>ref|NM_184232.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3193 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 103 gtgtggccgggcgacgtctacttcccggacttc 135 |||||||| ||| ||||||||||||||||||| Sbjct: 1472 gtgtggcccggccccgtctacttcccggacttc 1504
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 287 tcaacaacgacggcacgggcc 307 ||||||||||||||||||||| Sbjct: 2182555 tcaacaacgacggcacgggcc 2182575
>gb|DQ490507.1| Emericella nidulans alpha/beta-glucosidase (AN7345-2) mRNA, complete cds Length = 2685 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 ctgtggatcgacatgaacgag 228 ||||||||||||||||||||| Sbjct: 1276 ctgtggatcgacatgaacgag 1296
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 287 tcaacaacgacggcacgggcc 307 ||||||||||||||||||||| Sbjct: 3357351 tcaacaacgacggcacgggcc 3357371
>ref|XM_675522.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7345.2), mRNA Length = 2628 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 ctgtggatcgacatgaacgag 228 ||||||||||||||||||||| Sbjct: 1276 ctgtggatcgacatgaacgag 1296
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 322 aagacggtgccggcctccgccgtgc 346 |||||| |||||||||||||||||| Sbjct: 4977259 aagacgctgccggcctccgccgtgc 4977235
>emb|AL162851.10| Human DNA sequence from clone RP11-186M12 on chromosome 22, complete sequence Length = 172545 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 tgcagcaggacatcttcctga 73 ||||||||||||||||||||| Sbjct: 68524 tgcagcaggacatcttcctga 68544
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 287 tcaacaacgacggcacgggcc 307 ||||||||||||||||||||| Sbjct: 3088637 tcaacaacgacggcacgggcc 3088657
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 Length = 1725576 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Minus Query: 211 tggatcgacatgaacgagatctccaacttctacaacc 247 |||||||||||||||||| | | ||||||||||||| Sbjct: 1258942 tggatcgacatgaacgagcccgcaaacttctacaacc 1258906
>ref|XM_930982.1| PREDICTED: Homo sapiens hypothetical protein LOC642653 (LOC642653), mRNA Length = 609 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 tgcagcaggacatcttcctga 73 ||||||||||||||||||||| Sbjct: 131 tgcagcaggacatcttcctga 111
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 103 gtgtggccgggcgacgtctacttcccggacttc 135 |||||||| ||| ||||||||||||||||||| Sbjct: 1700077 gtgtggcccggccccgtctacttcccggacttc 1700109
>dbj|AP002526.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504H10 Length = 143515 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 103 gtgtggccgggcgacgtctacttcccggacttc 135 |||||||| ||| ||||||||||||||||||| Sbjct: 42420 gtgtggcccggccccgtctacttcccggacttc 42452
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 aacccggagccgatgaacgcg 264 ||||||||||||||||||||| Sbjct: 1409412 aacccggagccgatgaacgcg 1409392
>dbj|AP002538.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408F06 Length = 137462 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 103 gtgtggccgggcgacgtctacttcccggacttc 135 |||||||| ||| ||||||||||||||||||| Sbjct: 137308 gtgtggcccggccccgtctacttcccggacttc 137340
>emb|BX072566.10| Human DNA sequence from clone RP11-25L22 on chromosome 22, complete sequence Length = 164239 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 tgcagcaggacatcttcctga 73 ||||||||||||||||||||| Sbjct: 25358 tgcagcaggacatcttcctga 25338
>dbj|AK110956.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-A07, full insert sequence Length = 1990 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 103 gtgtggccgggcgacgtctacttcccggacttc 135 |||||||| ||| ||||||||||||||||||| Sbjct: 1436 gtgtggcccggccccgtctacttcccggacttc 1404
>dbj|AK102309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090B18, full insert sequence Length = 3486 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 103 gtgtggccgggcgacgtctacttcccggacttc 135 |||||||| ||| ||||||||||||||||||| Sbjct: 1473 gtgtggcccggccccgtctacttcccggacttc 1505
>emb|AL163204.2|HS21C004 Homo sapiens chromosome 21 segment HS21C004 Length = 340000 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 tgcagcaggacatcttcctga 73 ||||||||||||||||||||| Sbjct: 82749 tgcagcaggacatcttcctga 82769
>emb|AL050303.4|HS214G14 Homo sapiens chromosome 21 PAC RPCIP704G14214Q2, complete sequence Length = 166239 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 tgcagcaggacatcttcctga 73 ||||||||||||||||||||| Sbjct: 78163 tgcagcaggacatcttcctga 78183
>dbj|AK063966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-A04, full insert sequence Length = 3193 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 103 gtgtggccgggcgacgtctacttcccggacttc 135 |||||||| ||| ||||||||||||||||||| Sbjct: 1472 gtgtggcccggccccgtctacttcccggacttc 1504
>dbj|AP005670.1| Homo sapiens genomic DNA, chromosome 18 clone:RP11-72P4, complete sequence Length = 184770 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 tgcagcaggacatcttcctga 73 ||||||||||||||||||||| Sbjct: 23965 tgcagcaggacatcttcctga 23945
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 cgagatctccaacttctaca 244 |||||||||||||||||||| Sbjct: 3789762 cgagatctccaacttctaca 3789743
>dbj|AK068184.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013133H08, full insert sequence Length = 887 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 350 acggcggcgtcaccgagtacgacg 373 ||||||||||||||| |||||||| Sbjct: 178 acggcggcgtcaccgcgtacgacg 201
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 cgagatctccaacttctaca 244 |||||||||||||||||||| Sbjct: 1784207 cgagatctccaacttctaca 1784226
>gb|AY779909.1| Drosophila melanogaster strain NVIII-9 enhancer of split complex, complete sequence Length = 47165 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 206 ggctgtggatcgacatgaacgaga 229 ||||||||||||||||||| |||| Sbjct: 8090 ggctgtggatcgacatgaaagaga 8113 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,872,624 Number of Sequences: 3902068 Number of extensions: 1872624 Number of successful extensions: 36061 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 45 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 35247 Number of HSP's gapped (non-prelim): 811 length of query: 378 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 356 effective length of database: 17,147,199,772 effective search space: 6104403118832 effective search space used: 6104403118832 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
