ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast48c10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 57 2e-08
2APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 53 3e-07
3FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 40 0.003
4EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 35 0.072
5STK36_MOUSE (Q69ZM6) Serine/threonine-protein kinase 36 (EC 2.7.... 33 0.36
6HIS8_METAC (Q8TUE9) Histidinol-phosphate aminotransferase (EC 2.... 31 1.4
7HIS8_METMA (Q8PX17) Histidinol-phosphate aminotransferase (EC 2.... 30 3.0
8LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglyc... 29 3.9
9KLF17_HUMAN (Q5JT82) Krueppel-like factor 17 (Zinc finger protei... 29 5.1
10IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2 29 5.1
11AROE_NEIMU (P95389) Shikimate dehydrogenase (EC 1.1.1.25) 28 6.7

>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
 Frame = +1

Query: 166 RLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLP-GRPTGRFTNGYNLADVISQRL 342
           + + AV+ FGDS+ D GNN+ L        RPYGMD P G  TGRF+NG   +D IS+ L
Sbjct: 121 KTIPAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYL 180

Query: 343 G 345
           G
Sbjct: 181 G 181



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 52.8 bits (125), Expect = 3e-07
 Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
 Frame = +1

Query: 166 RLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLPGR-PTGRFTNGYNLADVISQRL 342
           + + AV+ FGDS+ D GNN+ L        RPYGMD   R  TGRF+NG   +D +++ +
Sbjct: 200 KTIPAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYM 259

Query: 343 GFEMSPKPYL 372
           G +     YL
Sbjct: 260 GVKEIVPAYL 269



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 25/66 (37%), Positives = 34/66 (51%)
 Frame = +1

Query: 178 AVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNGYNLADVISQRLGFEMS 357
           A++ FGDS  D G    L A   +A  P+G    G P GR+ +G  + D I++ LG    
Sbjct: 30  AIFNFGDSNSDTGG---LSAAFGQAGPPHGSSFFGSPAGRYCDGRLVIDFIAESLGL--- 83

Query: 358 PKPYLS 375
             PYLS
Sbjct: 84  --PYLS 87



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>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 35.0 bits (79), Expect = 0.072
 Identities = 24/68 (35%), Positives = 32/68 (47%)
 Frame = +1

Query: 178 AVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNGYNLADVISQRLGFEMS 357
           A++ FGDS  D G       P    N PYG     R TGR+++G  + D I++       
Sbjct: 34  AIFNFGDSNSDTGGKAAAFYPL---NPPYGETFFHRSTGRYSDGRLIIDFIAESFNLPYL 90

Query: 358 PKPYLSML 381
             PYLS L
Sbjct: 91  -SPYLSSL 97



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>STK36_MOUSE (Q69ZM6) Serine/threonine-protein kinase 36 (EC 2.7.11.1) (Fused|
           homolog)
          Length = 1268

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +2

Query: 23  PLPLASYHSHSESLQQRPWRGALL 94
           PL L  Y   S S+QQ+PW GALL
Sbjct: 470 PLSLLRYSQESSSIQQQPWYGALL 493



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>HIS8_METAC (Q8TUE9) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 367

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 22/73 (30%), Positives = 36/73 (49%)
 Frame = +1

Query: 199 SLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSM 378
           S++ +G+N+    P+P+A R      PG       +   L +V+S+  GF +S     S 
Sbjct: 39  SIIKLGSNENPLGPSPKAVRALVETAPGANIYPSADARELREVLSKYTGFPVS-NIVASG 97

Query: 379 LPHDKILLGLCKI 417
              D +L GLC+I
Sbjct: 98  PGMDGLLDGLCRI 110



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>HIS8_METMA (Q8PX17) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 368

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 20/74 (27%), Positives = 37/74 (50%)
 Frame = +1

Query: 196 DSLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNGYNLADVISQRLGFEMSPKPYLS 375
           +S++ +G+N+    P+P+A +      PG       + + L + +S+  GF +S     S
Sbjct: 39  ESIIKLGSNENPLGPSPKAVKALIEAAPGANIYPSADAHELREALSKYTGFPVS-NIVAS 97

Query: 376 MLPHDKILLGLCKI 417
               D +L GLC+I
Sbjct: 98  GPGMDGLLDGLCRI 111



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>LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase)|
          Length = 645

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
 Frame = +1

Query: 175 NAVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNG-----YNLADVISQR 339
           N +YVFGDSL D GNN                   GR T    NG     YN  D I+Q+
Sbjct: 26  NNLYVFGDSLSDGGNN-------------------GRYTVDGINGTESKLYN--DFIAQQ 64

Query: 340 LGFEM 354
           LG E+
Sbjct: 65  LGIEL 69



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>KLF17_HUMAN (Q5JT82) Krueppel-like factor 17 (Zinc finger protein 393)|
          Length = 389

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 23/71 (32%), Positives = 32/71 (45%)
 Frame = +1

Query: 193 GDSLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNGYNLADVISQRLGFEMSPKPYL 372
           G  L+ VG  +      PR  RP+G +L   P G   +      ++S   G    P P L
Sbjct: 129 GPQLMPVGEPNI-----PRVARPFGGNLRMPPNGLPVSASTGIPIMSHT-GNPPVPYPGL 182

Query: 373 SMLPHDKILLG 405
           S +P D+ LLG
Sbjct: 183 STVPSDETLLG 193



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>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2|
          Length = 969

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = +1

Query: 211 VGNNDYLPAPAPRANRPYGMDLPGRP 288
           VGNN Y   PAP   RP     PG P
Sbjct: 178 VGNNPYSSQPAPERERPAARPGPGGP 203



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>AROE_NEIMU (P95389) Shikimate dehydrogenase (EC 1.1.1.25)|
          Length = 269

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +1

Query: 280 GRPTGRFTNGYNLADVISQRLGFEMSPKPYL 372
           G+  G  T+G  L D IS+RLG E+S K  L
Sbjct: 97  GKIRGDNTDGIGLTDDISKRLGVELSGKTVL 127


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,385,765
Number of Sequences: 219361
Number of extensions: 620923
Number of successful extensions: 1872
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1869
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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