>DBP5_YARLI (Q6C3X7) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)|
          Length = 488

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 29/103 (28%), Positives = 42/103 (40%)
 Frame = +2

Query: 23  QATTYKPLGGLTLDRPLGLGRNCKILPQHSVWQHFSRSCKLEEKVYPRLVVAACHKRLGP 202
           QA    PL        LGL  N   L +      F++  K++EK  P L+    H  +G 
Sbjct: 88  QADPNSPLYSAKRFEDLGLDEN---LLKGLYAMKFNKPSKIQEKALPLLLSDPPHNMIG- 143

Query: 203 VYASSGKGANDPFSMESLNKAMDGAKKQQSIQGFLMEQMARIT 331
             + SG G    FS+  L++     K  Q I      ++AR T
Sbjct: 144 -QSQSGTGKTGAFSLTMLSRVDPNLKAVQCICLAPSRELARQT 185

>DBP5_KLULA (Q6CJU1) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)|
          Length = 469

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 27/108 (25%), Positives = 42/108 (38%)
 Frame = +2

Query: 8   NMSYCQATTYKPLGGLTLDRPLGLGRNCKILPQHSVWQHFSRSCKLEEKVYPRLVVAACH 187
           N++  QA    PL  +     LGL      L +      F +  K++EK  P L+    H
Sbjct: 63  NLADLQADANSPLYSVKSFEELGLSEE---LLKGLYAMKFQKPSKIQEKALPLLIRDPPH 119

Query: 188 KRLGPVYASSGKGANDPFSMESLNKAMDGAKKQQSIQGFLMEQMARIT 331
             +    + SG G    FS+  L +        Q+I      ++AR T
Sbjct: 120 NMI--AQSQSGTGKTAAFSLTMLTRVDPNVNSTQAICLSPARELARQT 165


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,536,517
Number of Sequences: 219361
Number of extensions: 1297232
Number of successful extensions: 3629
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3626
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)