ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast48b11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473006.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1014 Score = 73.8 bits (37), Expect = 4e-10 Identities = 69/79 (87%), Gaps = 3/79 (3%) Strand = Plus / Plus Query: 147 aagagaaagtatatccaaggcttgtt---gttgctgcttgccataagaggcttggtcctg 203 ||||| ||||||| ||||||||| || ||||||||||||||||| ||| ||||||||| Sbjct: 401 aagagcaagtatacccaaggcttcttcttgttgctgcttgccataacaggattggtcctg 460 Query: 204 tatatgcctcaagcgggaa 222 | ||||||||||| ||||| Sbjct: 461 tgtatgcctcaagtgggaa 479 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 229 caatgatcctttctctatggaatctttgaacaaagcaatggatggagcaaaaaagcaa 286 ||||||||| ||||| |||||||||||||||||||| || | |||| | ||||||||| Sbjct: 498 caatgatcccttctccatggaatctttgaacaaagctatagctggaactaaaaagcaa 555 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 397 tggcccagatgacgaatctttcacggattcattgtatgaagtggtccaagtt 448 |||| |||| ||||||||||| ||||| ||||| |||||| ||||||||||| Sbjct: 660 tggctcagaggacgaatctttgacggagtcattatatgaaatggtccaagtt 711
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 73.8 bits (37), Expect = 4e-10 Identities = 69/79 (87%), Gaps = 3/79 (3%) Strand = Plus / Minus Query: 147 aagagaaagtatatccaaggcttgtt---gttgctgcttgccataagaggcttggtcctg 203 ||||| ||||||| ||||||||| || ||||||||||||||||| ||| ||||||||| Sbjct: 24645154 aagagcaagtatacccaaggcttcttcttgttgctgcttgccataacaggattggtcctg 24645095 Query: 204 tatatgcctcaagcgggaa 222 | ||||||||||| ||||| Sbjct: 24645094 tgtatgcctcaagtgggaa 24645076 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 397 tggcccagatgacgaatctttcacggattcattgtatgaagtggtccaagtt 448 |||| |||| ||||||||||| ||||| ||||| |||||| ||||||||||| Sbjct: 24644165 tggctcagaggacgaatctttgacggagtcattatatgaaatggtccaagtt 24644114 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Minus Query: 239 ttctctatggaatctttgaacaaagcaatggatggagcaaaaaagcaa 286 ||||| |||||||||||||||||||| || | |||| | ||||||||| Sbjct: 24644317 ttctccatggaatctttgaacaaagctatagctggaactaaaaagcaa 24644270 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 cttgttgttgctgcttgccat 187 ||||||||||||||||||||| Sbjct: 32392625 cttgttgttgctgcttgccat 32392645
>dbj|AK064114.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-H12, full insert sequence Length = 1519 Score = 73.8 bits (37), Expect = 4e-10 Identities = 69/79 (87%), Gaps = 3/79 (3%) Strand = Plus / Plus Query: 147 aagagaaagtatatccaaggcttgtt---gttgctgcttgccataagaggcttggtcctg 203 ||||| ||||||| ||||||||| || ||||||||||||||||| ||| ||||||||| Sbjct: 369 aagagcaagtatacccaaggcttcttcttgttgctgcttgccataacaggattggtcctg 428 Query: 204 tatatgcctcaagcgggaa 222 | ||||||||||| ||||| Sbjct: 429 tgtatgcctcaagtgggaa 447 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 229 caatgatcctttctctatggaatctttgaacaaagcaatggatggagcaaaaaagcaa 286 ||||||||| ||||| |||||||||||||||||||| || | |||| | ||||||||| Sbjct: 466 caatgatcccttctccatggaatctttgaacaaagctatagctggaactaaaaagcaa 523 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 397 tggcccagatgacgaatctttcacggattcattgtatgaagtggtccaagtt 448 |||| |||| ||||||||||| ||||| ||||| |||||| ||||||||||| Sbjct: 628 tggctcagaggacgaatctttgacggagtcattatatgaaatggtccaagtt 679
>dbj|AK062853.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-A06, full insert sequence Length = 1185 Score = 73.8 bits (37), Expect = 4e-10 Identities = 69/79 (87%), Gaps = 3/79 (3%) Strand = Plus / Plus Query: 147 aagagaaagtatatccaaggcttgtt---gttgctgcttgccataagaggcttggtcctg 203 ||||| ||||||| ||||||||| || ||||||||||||||||| ||| ||||||||| Sbjct: 340 aagagcaagtatacccaaggcttcttcttgttgctgcttgccataacaggattggtcctg 399 Query: 204 tatatgcctcaagcgggaa 222 | ||||||||||| ||||| Sbjct: 400 tgtatgcctcaagtgggaa 418 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 229 caatgatcctttctctatggaatctttgaacaaagcaatggatggagcaaaaaagcaa 286 ||||||||| ||||| |||||||||||||||||||| || | |||| | ||||||||| Sbjct: 437 caatgatcccttctccatggaatctttgaacaaagctatagctggaactaaaaagcaa 494 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 397 tggcccagatgacgaatctttcacggattcattgtatgaagtggtccaagtt 448 |||| |||| ||||||||||| ||||| ||||| |||||| ||||||||||| Sbjct: 599 tggctcagaggacgaatctttgacggagtcattatatgaaatggtccaagtt 650
>emb|AL512542.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0522A01, complete sequence Length = 97077 Score = 73.8 bits (37), Expect = 4e-10 Identities = 69/79 (87%), Gaps = 3/79 (3%) Strand = Plus / Minus Query: 147 aagagaaagtatatccaaggcttgtt---gttgctgcttgccataagaggcttggtcctg 203 ||||| ||||||| ||||||||| || ||||||||||||||||| ||| ||||||||| Sbjct: 84140 aagagcaagtatacccaaggcttcttcttgttgctgcttgccataacaggattggtcctg 84081 Query: 204 tatatgcctcaagcgggaa 222 | ||||||||||| ||||| Sbjct: 84080 tgtatgcctcaagtgggaa 84062 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 397 tggcccagatgacgaatctttcacggattcattgtatgaagtggtccaagtt 448 |||| |||| ||||||||||| ||||| ||||| |||||| ||||||||||| Sbjct: 83150 tggctcagaggacgaatctttgacggagtcattatatgaaatggtccaagtt 83099 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Minus Query: 245 atggaatctttgaacaaagcaatggatggagcaaaaaagcaa 286 |||||||||||||||||||| || | |||| | ||||||||| Sbjct: 83296 atggaatctttgaacaaagctatagctggaactaaaaagcaa 83255
>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11, complete sequence Length = 133856 Score = 73.8 bits (37), Expect = 4e-10 Identities = 69/79 (87%), Gaps = 3/79 (3%) Strand = Plus / Minus Query: 147 aagagaaagtatatccaaggcttgtt---gttgctgcttgccataagaggcttggtcctg 203 ||||| ||||||| ||||||||| || ||||||||||||||||| ||| ||||||||| Sbjct: 34677 aagagcaagtatacccaaggcttcttcttgttgctgcttgccataacaggattggtcctg 34618 Query: 204 tatatgcctcaagcgggaa 222 | ||||||||||| ||||| Sbjct: 34617 tgtatgcctcaagtgggaa 34599 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 397 tggcccagatgacgaatctttcacggattcattgtatgaagtggtccaagtt 448 |||| |||| ||||||||||| ||||| ||||| |||||| ||||||||||| Sbjct: 33688 tggctcagaggacgaatctttgacggagtcattatatgaaatggtccaagtt 33637 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Minus Query: 239 ttctctatggaatctttgaacaaagcaatggatggagcaaaaaagcaa 286 ||||| |||||||||||||||||||| || | |||| | ||||||||| Sbjct: 33840 ttctccatggaatctttgaacaaagctatagctggaactaaaaagcaa 33793
>gb|AY105069.1| Zea mays PCO099796 mRNA sequence Length = 802 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 384 gtggtggttctgatggcccagatgacgaatctttcacggattcattgtatgaagtggtcc 443 |||||||||||| |||||||||||| ||||| |||| ||| ||||| ||||||| || | Sbjct: 151 gtggtggttctggtggcccagatgatgaatcgttcaaggaaacattggatgaagtagtgc 210 Query: 444 aagtt 448 ||||| Sbjct: 211 aagtt 215
>ref|XM_474035.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1341 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 cttgttgttgctgcttgccat 187 ||||||||||||||||||||| Sbjct: 21 cttgttgttgctgcttgccat 1
>emb|Z54271.1|CEF21D5 Caenorhabditis elegans Cosmid F21D5, complete sequence Length = 21173 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 agcaatggatggagcaaaaaa 282 ||||||||||||||||||||| Sbjct: 17738 agcaatggatggagcaaaaaa 17718
>emb|AL135778.9| Human DNA sequence from clone RP1-119C5 on chromosome 6 Contains the 5' end of the BMP6 gene for bone morphogenetic protein 6 and a CpG island, complete sequence Length = 152786 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 ttgcaagctggaagagaaagt 156 ||||||||||||||||||||| Sbjct: 48628 ttgcaagctggaagagaaagt 48608
>emb|AL596090.11| Mouse DNA sequence from clone RP23-135F6 on chromosome 11 Contains the 5' end of the gene for the likely ortholog of H. sapiens target of myb1-like 2 (chicken) (TOM1L2) (A730055F12Rik), a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, the gene for a novel Leucine Rich Repeat domain-containing protein (4930449E07Rik), the Atpaf2 gene for ATP synthase mitochondrial F1 complex assembly factor 2, the gene for a novel protein (4933439F18Rik), an acid phosphatase 1 soluble (Acp1) pseudogene, a ribosomal protein S4, X-linked (Rps4x) pseudogene, the Drg2 gene for developmentally regulated GTP binding protein 2, the 5' end of the Myo15 gene for myosin XV and four CpG islands, complete sequence Length = 207440 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 272 ggagcaaaaaagcaacagtct 292 ||||||||||||||||||||| Sbjct: 85209 ggagcaaaaaagcaacagtct 85229
>emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034I13, complete sequence Length = 123480 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 cttgttgttgctgcttgccat 187 ||||||||||||||||||||| Sbjct: 9426 cttgttgttgctgcttgccat 9446
>gb|AC066593.4| Homo sapiens chromosome 3 clone RP11-344O5 map 3p, complete sequence Length = 165873 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 tttctctatggaatctttgaa 258 ||||||||||||||||||||| Sbjct: 23374 tttctctatggaatctttgaa 23354
>gb|AC068561.2|AC068561 Mus musculus strain C57BL6/J chromosome 6 clone RP23-86H7, complete sequence Length = 230839 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 cttcctgatggagcaaatggc 321 ||||||||||||||||||||| Sbjct: 114193 cttcctgatggagcaaatggc 114213
>ref|NM_069102.2| Caenorhabditis elegans F21D5.5 (F21D5.5) mRNA, complete cds Length = 1350 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 agcaatggatggagcaaaaaa 282 ||||||||||||||||||||| Sbjct: 29 agcaatggatggagcaaaaaa 49
>gb|AF292046.1|AF292046 Caenorhabditis elegans polynucleotide kinase 3' phosphatase (4J500) mRNA, complete cds Length = 1350 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 agcaatggatggagcaaaaaa 282 ||||||||||||||||||||| Sbjct: 29 agcaatggatggagcaaaaaa 49
>gb|AC158647.2| Mus musculus 6 BAC RP23-275N13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208007 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 cttcctgatggagcaaatggc 321 ||||||||||||||||||||| Sbjct: 40731 cttcctgatggagcaaatggc 40751
>dbj|AK102214.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087K04, full insert sequence Length = 1696 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 cttgttgttgctgcttgccat 187 ||||||||||||||||||||| Sbjct: 40 cttgttgttgctgcttgccat 20
>emb|AL512546.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0410G08, complete sequence Length = 63554 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 cttgttgttgctgcttgccat 187 ||||||||||||||||||||| Sbjct: 54115 cttgttgttgctgcttgccat 54135
>gb|AC113586.14| Mus musculus chromosome 8, clone RP23-17D24, complete sequence Length = 206445 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 ggaaatggaggaaataataa 366 |||||||||||||||||||| Sbjct: 148279 ggaaatggaggaaataataa 148260
>gb|AC112997.10| Mus musculus chromosome 8, clone RP24-484I6, complete sequence Length = 191413 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 ggaaatggaggaaataataa 366 |||||||||||||||||||| Sbjct: 183311 ggaaatggaggaaataataa 183330
>gb|AC166989.4| Mus musculus BAC clone RP24-345J5 from chromosome 16, complete sequence Length = 232228 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 aggacaggggtctggtggaa 350 |||||||||||||||||||| Sbjct: 163788 aggacaggggtctggtggaa 163807
>ref|XM_322807.1| Neurospora crassa OR74A hypothetical protein (NCU03550.1) partial mRNA Length = 3567 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 caaggcttgttgttgctgct 181 |||||||||||||||||||| Sbjct: 1569 caaggcttgttgttgctgct 1550
>ref|XM_950681.1| Neurospora crassa OR74A hypothetical protein (NCU03550.1) partial mRNA Length = 3567 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 caaggcttgttgttgctgct 181 |||||||||||||||||||| Sbjct: 1569 caaggcttgttgttgctgct 1550
>ref|XM_534959.2| PREDICTED: Canis familiaris similar to Ribonuclease P protein subunit p30 (RNaseP protein p30) (RNase P subunit 2), transcript variant 1 (LOC477763), mRNA Length = 1300 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tcttgcaagctggaagagaa 153 |||||||||||||||||||| Sbjct: 809 tcttgcaagctggaagagaa 790
>ref|XM_852465.1| PREDICTED: Canis familiaris similar to Ribonuclease P protein subunit p30 (RNaseP protein p30) (RNase P subunit 2), transcript variant 2 (LOC477763), mRNA Length = 1264 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tcttgcaagctggaagagaa 153 |||||||||||||||||||| Sbjct: 773 tcttgcaagctggaagagaa 754
>gb|AC166327.1| Mus musculus BAC clone RP23-175K2 from chromosome 16, complete sequence Length = 188081 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 aggacaggggtctggtggaa 350 |||||||||||||||||||| Sbjct: 42818 aggacaggggtctggtggaa 42837
>emb|AL669986.1|NCB7N14 Neurospora crassa DNA linkage group II BAC clone B7N14 Length = 107947 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 caaggcttgttgttgctgct 181 |||||||||||||||||||| Sbjct: 67669 caaggcttgttgttgctgct 67688
>emb|AL591430.8| Mouse DNA sequence from clone RP23-41B20 on chromosome 2 Contains the 5' end of the Cdh22 gene for cadherin 22, the Ovcov1 gene for ovarian cancer overexpressed 1, the Elmo2 gene for engulfment and cell motility 2, ced-12 homolog (C. elegans), the 3' end of a putative novel zinc finger protein and three CpG islands, complete sequence Length = 144243 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 tgttgctgcttgccataagaggct 195 |||||||||||||| ||||||||| Sbjct: 22579 tgttgctgcttgccctaagaggct 22556
>gb|AC124904.3| Equus caballus clone CH241-137P22, complete sequence Length = 95553 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 tcttgggagaaattgcaaaa 95 |||||||||||||||||||| Sbjct: 63851 tcttgggagaaattgcaaaa 63870
>gb|AC124907.3| Equus caballus clone CH241-409I22, complete sequence Length = 202157 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 tcttgggagaaattgcaaaa 95 |||||||||||||||||||| Sbjct: 8623 tcttgggagaaattgcaaaa 8642
>gb|AC182390.3| Pan troglodytes BAC clone CH251-614D4 from chromosome 17, complete sequence Length = 197192 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 caaatggctaggattacagg 333 |||||||||||||||||||| Sbjct: 54339 caaatggctaggattacagg 54358
>gb|AC099805.2| Homo sapiens chromosome 8, clone RP11-1102P16, complete sequence Length = 178448 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 caaatggctaggattacagg 333 |||||||||||||||||||| Sbjct: 38303 caaatggctaggattacagg 38284
>gb|AC087664.5| Homo sapiens chromosome 8, clone RP11-379I19, complete sequence Length = 199456 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 caaatggctaggattacagg 333 |||||||||||||||||||| Sbjct: 147609 caaatggctaggattacagg 147590
>gb|AC007020.5| Arabidopsis thaliana chromosome 2 clone T3G21 map g4514, complete sequence Length = 82652 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ggagaaattgcaaaatactt 100 |||||||||||||||||||| Sbjct: 11874 ggagaaattgcaaaatactt 11855
>gb|AC106777.2| Homo sapiens chromosome 5 clone RP11-326M11, complete sequence Length = 161720 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 ggaaatggaggaaataataa 366 |||||||||||||||||||| Sbjct: 136277 ggaaatggaggaaataataa 136258
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 aatacttcctcaacattctg 113 |||||||||||||||||||| Sbjct: 2697047 aatacttcctcaacattctg 2697028
>gb|AC132812.9| Homo sapiens chromosome 17, clone RP13-104F24, complete sequence Length = 161139 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 caaatggctaggattacagg 333 |||||||||||||||||||| Sbjct: 78365 caaatggctaggattacagg 78346
>gb|AC004081.1|AC004081 Homo sapiens PAC clone RP1-320J15 from Xq23, complete sequence Length = 149409 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 160 tccaaggcttgttgttgctgcttg 183 |||| ||||||||||||||||||| Sbjct: 48333 tccatggcttgttgttgctgcttg 48310
>gb|AF085279.1|AF085279 Arabidopsis thaliana ABA-regulated gene cluster, complete sequence Length = 95713 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ggagaaattgcaaaatactt 100 |||||||||||||||||||| Sbjct: 66924 ggagaaattgcaaaatactt 66905
>dbj|AP000866.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-677M14, complete sequence Length = 187960 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 caaatggctaggattacagg 333 |||||||||||||||||||| Sbjct: 168103 caaatggctaggattacagg 168084
>gb|DP000020.1| Equus caballus target 1 genomic scaffold Length = 1907055 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 tcttgggagaaattgcaaaa 95 |||||||||||||||||||| Sbjct: 516817 tcttgggagaaattgcaaaa 516836
>dbj|AP002027.1| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:496L13, complete sequence Length = 182676 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tttttctagatcttgcaagc 143 |||||||||||||||||||| Sbjct: 126578 tttttctagatcttgcaagc 126559
>dbj|AP001960.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2064I15, complete sequence Length = 140730 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 tttttctagatcttgcaagc 143 |||||||||||||||||||| Sbjct: 125475 tttttctagatcttgcaagc 125494 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,651,503 Number of Sequences: 3902068 Number of extensions: 4651503 Number of successful extensions: 194729 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 45 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 194515 Number of HSP's gapped (non-prelim): 214 length of query: 450 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 428 effective length of database: 17,147,199,772 effective search space: 7339001502416 effective search space used: 7339001502416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
