Clone Name	bast48b10
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	WS17_SCHMA (Q26544) WD-repeat protein SL1-17	57	2e-08
2	HETE1_PODAN (Q00808) Vegetatible incompatibility protein HET-E-1	51	2e-06
3	YZLL_CAEEL (Q93847) Hypothetical WD-repeat protein K04G11.4	44	2e-04
4	YH92_CAEEL (Q23256) Hypothetical WD-repeat protein ZC302.2	44	2e-04
5	YKY4_CAEEL (Q17963) Hypothetical WD-repeat protein C14B1.4	44	2e-04
6	KTNB1_BRARE (Q7ZUV2) Katanin p80 WD40-containing subunit B1 homolog	44	2e-04
7	PF20_CHLRE (P93107) Flagellar WD-repeat protein PF20	43	4e-04
8	PKWA_THECU (P49695) Probable serine/threonine-protein kinase pkw...	42	7e-04
9	UTP13_SCHPO (Q9USN3) Probable U3 small nucleolar RNA-associated ...	41	0.001
10	YY46_ANASP (Q8YRI1) Hypothetical WD-repeat protein alr3466	40	0.004
11	TAF5_DROME (P49846) Transcription initiation factor TFIID subuni...	39	0.005
12	WDR5_MOUSE (P61965) WD-repeat protein 5 (BMP2-induced 3-kb gene ...	39	0.005
13	WDR5_HUMAN (P61964) WD-repeat protein 5 (BMP2-induced 3-kb gene ...	39	0.005
14	SEL10_CAEEL (Q93794) F-box/WD-repeat protein sel-10 (Suppressor/...	39	0.005
15	Y2800_ANASP (Q8YTC2) Hypothetical WD-repeat protein alr2800	39	0.006
16	WDS_DROME (Q9V3J8) Protein will die slowly	39	0.006
17	TUP11_SCHPO (Q09715) Transcriptional repressor tup11	39	0.008
18	SWD3_SCHPO (O43017) Set1 complex component swd3 (Set1C component...	39	0.008
19	PRP4_HUMAN (O43172) U4/U6 small nuclear ribonucleoprotein Prp4 (...	38	0.010
20	PRP4_PONPY (Q5NVD0) U4/U6 small nuclear ribonucleoprotein Prp4 (...	38	0.010
21	PRP4_MOUSE (Q9DAW6) U4/U6 small nuclear ribonucleoprotein Prp4 (...	38	0.010
22	RCO1_NEUCR (P78706) Transcriptional repressor rco-1	38	0.014
23	Y2124_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124	38	0.014
24	WDR39_HUMAN (O76071) WD-repeat protein 39 (Ciao 1 protein)	37	0.018
25	CO5A1_HUMAN (P20908) Collagen alpha-1(V) chain precursor	36	0.039
26	KTNB1_CHICK (Q5ZIU8) Katanin p80 WD40-containing subunit B1 (Kat...	36	0.039
27	PRP46_CANAL (Q5A7Q3) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-pr...	36	0.052
28	UTP13_YEAST (Q05946) U3 small nucleolar RNA-associated protein 1...	36	0.052
29	CO5A1_CRILO (Q60467) Collagen alpha-1(V) chain precursor	36	0.052
30	DOA1_YEAST (P36037) Protein DOA1	36	0.052
31	LIS1_DROME (Q7KNS3) Lissencephaly-1 homolog (Lissencephaly1) (Dl...	35	0.067
32	CO5A1_MOUSE (O88207) Collagen alpha-1(V) chain precursor	35	0.067
33	GBB2_CAEEL (Q20636) Guanine nucleotide-binding protein beta subu...	35	0.067
34	CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor	35	0.067
35	WDR17_HUMAN (Q8IZU2) WD-repeat protein 17	35	0.067
36	SCONB_EMENI (Q00659) Sulfur metabolite repression control protein	35	0.088
37	COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor	35	0.088
38	COBA1_BOVIN (Q28083) Collagen alpha-1(XI) chain precursor (Fragm...	35	0.088
39	PRP46_CANGA (Q6FJZ9) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-pr...	35	0.088
40	CO4A4_HUMAN (P53420) Collagen alpha-4(IV) chain precursor	35	0.088
41	CO5A1_RAT (Q9JI03) Collagen alpha-1(V) chain precursor	35	0.088
42	COPB2_CAEEL (Q20168) Probable coatomer subunit beta' (Beta'-coat...	35	0.11
43	HAT2_ASPFU (Q4WEI5) Histone acetyltransferase type B subunit 2 (...	35	0.11
44	CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor	35	0.11
45	ERCC8_MOUSE (Q8CFD5) DNA excision repair protein ERCC-8 (Cockayn...	35	0.11
46	PRP46_CRYNE (Q5KDR4) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-pr...	35	0.11
47	PRP46_ASPFU (Q4WT34) Pre-mRNA-splicing factor prp46 (Pre-mRNA-pr...	34	0.15
48	PFS2_YEAST (P42841) Protein PFS2	34	0.15
49	COGA1_HUMAN (Q07092) Collagen alpha-1(XVI) chain precursor	34	0.15
50	PRP46_SCHPO (O13615) Pre-mRNA-splicing factor prp46 (Pre-mRNA-pr...	34	0.15
51	WDR3_HUMAN (Q9UNX4) WD-repeat protein 3	34	0.20
52	HAT2_ASPOR (Q2UA71) Histone acetyltransferase type B subunit 2 (...	34	0.20
53	FBXW7_HUMAN (Q969H0) F-box/WD-repeat protein 7 (F-box and WD-40 ...	34	0.20
54	SFTPA_RABIT (P12842) Pulmonary surfactant-associated protein A p...	34	0.20
55	FBXW7_MOUSE (Q8VBV4) F-box/WD-repeat protein 7 (F-box and WD-40 ...	34	0.20
56	TUP12_SCHPO (Q9UUG8) Transcriptional repressor tup12	34	0.20
57	TBL1R_MOUSE (Q8BHJ5) F-box-like/WD-repeat protein TBL1XR1 (Trans...	34	0.20
58	CI112_MOUSE (Q9CYU6) WD repeat-containing protein C9orf112 homolog	34	0.20
59	CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long...	34	0.20
60	CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor	33	0.26
61	PRP4_ARATH (O22212) U4/U6 small nuclear ribonucleoprotein PRP4-l...	33	0.26
62	ERCC8_BOVIN (Q5BIM8) DNA excision repair protein ERCC-8	33	0.26
63	TB1RB_XENLA (Q6GPC6) F-box-like/WD-repeat-containing protein TBL...	33	0.26
64	TB1RA_XENLA (Q7SZM9) F-box-like/WD-repeat-containing protein TBL...	33	0.26
65	YCW2_YEAST (P25382) Hypothetical WD-repeat protein YCR072C	33	0.33
66	POP2_SCHPO (O14170) WD-repeat protein pop2 (Proteolysis factor s...	33	0.33
67	FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 ...	33	0.33
68	TBL1R_HUMAN (Q9BZK7) F-box-like/WD-repeat protein TBL1XR1 (Trans...	33	0.33
69	Y1491_SYNY3 (P74598) Hypothetical WD-repeat protein sll1491	33	0.33
70	YAGE_SCHPO (Q9UTN4) Hypothetical WD-repeat protein C12G12.14c in...	33	0.44
71	TBLX_MOUSE (Q9QXE7) F-box-like/WD-repeat protein TBL1X (Transduc...	33	0.44
72	KTNB1_MOUSE (Q8BG40) Katanin p80 WD40-containing subunit B1 (Kat...	33	0.44
73	TAF5L_MOUSE (Q91WQ5) TAF5-like RNA polymerase II p300/CBP-associ...	33	0.44
74	TAF5L_HUMAN (O75529) TAF5-like RNA polymerase II p300/CBP-associ...	33	0.44
75	CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor	33	0.44
76	PRP46_YARLI (Q6C709) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-pr...	33	0.44
77	COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor	33	0.44
78	POP1_SCHPO (P87060) WD-repeat protein pop1	33	0.44
79	KTNB1_HUMAN (Q9BVA0) Katanin p80 WD40-containing subunit B1 (Kat...	33	0.44
80	LIS1_RAT (P63004) Platelet-activating factor acetylhydrolase IB ...	32	0.57
81	LIS1_MOUSE (P63005) Platelet-activating factor acetylhydrolase I...	32	0.57
82	LIS1_MACFA (Q8HXX0) Platelet-activating factor acetylhydrolase I...	32	0.57
83	LIS1_HUMAN (P43034) Platelet-activating factor acetylhydrolase I...	32	0.57
84	LIS1_BOVIN (P43033) Platelet-activating factor acetylhydrolase I...	32	0.57
85	SFTPA_RAT (P08427) Pulmonary surfactant-associated protein A pre...	32	0.57
86	DPY10_CAEEL (P35800) Cuticle collagen dpy-10 precursor (Protein ...	32	0.57
87	CORO7_HUMAN (P57737) Coronin-7 (70 kDa WD repeat tumor rejection...	32	0.57
88	NPP17_CAEEL (Q93454) Nucleoporin-17 (Nuclear pore complex protei...	32	0.57
89	PRP46_ASHGO (Q75BY3) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-pr...	32	0.57
90	TBL1Y_HUMAN (Q9BQ87) F-box-like/WD-repeat protein TBL1Y (Transdu...	32	0.57
91	TBL1X_HUMAN (O60907) F-box-like/WD-repeat protein TBL1X (Transdu...	32	0.57
92	COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor	32	0.74
93	COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor	32	0.74
94	LIS1_PANTR (Q5IS43) Platelet-activating factor acetylhydrolase I...	32	0.74
95	ERCC8_HUMAN (Q13216) DNA excision repair protein ERCC-8 (Cockayn...	32	0.74
96	WD51A_BOVIN (Q2TBP4) WD-repeat protein 51A	32	0.74
97	C1QT5_RAT (Q5FVH0) Complement C1q tumor necrosis factor-related ...	32	0.74
98	C1QT5_MOUSE (Q8K479) Complement C1q tumor necrosis factor-relate...	32	0.74
99	PR285_HUMAN (Q9BYK8) Peroxisomal proliferator-activated receptor...	32	0.74
100	IF2_MYCLE (Q9Z5I9) Translation initiation factor IF-2	32	0.74
101	CO4A2_MOUSE (P08122) Collagen alpha-2(IV) chain precursor	32	0.74
102	EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi	32	0.74
103	WDR47_MOUSE (Q8CGF6) WD-repeat protein 47	32	0.97
104	CO9A1_CHICK (P12106) Collagen alpha-1(IX) chain precursor	32	0.97
105	SFTPA_SHEEP (Q9TT06) Pulmonary surfactant-associated protein A p...	32	0.97
106	COPA_YEAST (P53622) Coatomer subunit alpha (Alpha-coat protein) ...	32	0.97
107	PRP46_DEBHA (Q6BU94) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-pr...	32	0.97
108	C1QT5_HUMAN (Q9BXJ0) Complement C1q tumor necrosis factor-relate...	32	0.97
109	CO4A1_DROME (P08120) Collagen alpha-1(IV) chain precursor	32	0.97
110	WD51A_MOUSE (Q8JZX3) WD-repeat protein 51A	32	0.97
111	CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodp...	32	0.97
112	CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Conta...	32	0.97
113	C1QT7_HUMAN (Q9BXJ2) Complement C1q tumor necrosis factor-relate...	32	0.97
114	WDR47_HUMAN (O94967) WD-repeat protein 47	32	0.97
115	SFTPA_BOVIN (Q6RXL1) Pulmonary surfactant-associated protein A (...	32	0.97
116	CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor	30	1.0
117	CO4A6_HUMAN (Q14031) Collagen alpha-6(IV) chain precursor	31	1.3
118	CDC4_CANAL (P53699) Cell division control protein 4	31	1.3
119	GRWD1_HUMAN (Q9BQ67) Glutamate-rich WD repeat-containing protein 1	31	1.3
120	KTNB1_STRPU (O61585) Katanin p80 WD40-containing subunit B1 (Kat...	31	1.3
121	WD51A_HUMAN (Q8NBT0) WD-repeat protein 51A	31	1.3
122	CO1A2_CHICK (P02467) Collagen alpha-2(I) chain precursor (Fragme...	31	1.3
123	CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor	31	1.3
124	Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163	31	1.3
125	CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor	31	1.3
126	CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)	31	1.3
127	PWP2_SCHPO (Q9C1X1) Periodic tryptophan protein 2 homolog	31	1.3
128	TAF73_SCHPO (O74319) Transcription initiation factor TFIID subun...	31	1.7
129	PWP1_MOUSE (Q99LL5) Periodic tryptophan protein 1 homolog	31	1.7
130	SFTPA_PIG (P49874) Pulmonary surfactant-associated protein A pre...	31	1.7
131	WDR31_MOUSE (Q9JHB4) WD-repeat protein 31 (Spermatid WD-repeat p...	31	1.7
132	CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)	31	1.7
133	CO2A1_BOVIN (P02459) Collagen alpha-1(II) chain precursor (Fragm...	31	1.7
134	CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Frag...	31	1.7
135	TUP1_CANAL (P56093) Transcriptional repressor TUP1	31	1.7
136	CUC2C_HAECO (P16252) Cuticle collagen 2C (Fragment)	31	1.7
137	RS6E_METKA (Q8TVE6) 30S ribosomal protein S6e	31	1.7
138	COEA1_MOUSE (Q80X19) Collagen alpha-1(XIV) chain precursor	31	1.7
139	WDR57_MOUSE (Q6PE01) WD-repeat protein 57	31	1.7
140	CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor	31	1.7
141	C1QT7_MOUSE (Q8BVD7) Complement C1q tumor necrosis factor-relate...	31	1.7
142	RAE1L_ARATH (Q38942) Rae1-like protein At1g80670	30	2.2
143	CO4A2_HUMAN (P08572) Collagen alpha-2(IV) chain precursor	30	2.2
144	CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor	30	2.2
145	WDR57_PONPY (Q5RF51) WD-repeat protein 57	30	2.2
146	WDR57_HUMAN (Q96DI7) WD-repeat protein 57 (Prp8-binding protein)...	30	2.2
147	SFTPA_MOUSE (P35242) Pulmonary surfactant-associated protein A p...	30	2.2
148	PRP19_HUMAN (Q9UMS4) Pre-mRNA-splicing factor 19 (PRP19/PSO4 hom...	30	2.2
149	PRP19_CAEEL (Q10051) PRP19/PSO4 homolog	30	2.2
150	TAF5_SCHPO (O13282) Transcription initiation factor TFIID subuni...	30	2.2
151	SWD3_YEAST (P38123) COMPASS component SWD3 (Complex proteins ass...	30	2.2
152	CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor	30	2.2
153	CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor	30	2.2
154	KI21A_HUMAN (Q7Z4S6) Kinesin family member 21A (Kinesin-like pro...	30	2.2
155	YYAE_BACSU (P37519) Hypothetical protein yyaE	30	2.8
156	TAF5_YEAST (P38129) Transcription initiation factor TFIID subuni...	30	2.8
157	COL8_CAEEL (P18833) Cuticle collagen 8 precursor	30	2.8
158	PHK_RHOPA (Q6N976) Probable phosphoketolase (EC 4.1.2.-)	30	2.8
159	WDR1_MOUSE (O88342) WD-repeat protein 1 (Actin-interacting prote...	30	2.8
160	MET30_YEAST (P39014) F-box protein MET30 (Methionine requiring p...	30	2.8
161	CO6A3_HUMAN (P12111) Collagen alpha-3(VI) chain precursor	30	3.7
162	IFA1_CAEEL (P90901) Intermediate filament protein ifa-1 (Interme...	30	3.7
163	CO6A2_CHICK (P15988) Collagen alpha-2(VI) chain precursor	30	3.7
164	CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor	30	3.7
165	WD51B_PONPY (Q5RD06) WD-repeat protein 51B	30	3.7
166	MARCO_HUMAN (Q9UEW3) Macrophage receptor MARCO (Macrophage recep...	30	3.7
167	CO9A1_HUMAN (P20849) Collagen alpha-1(IX) chain precursor	30	3.7
168	TUP1_YEAST (P16649) Glucose repression regulatory protein TUP1 (...	30	3.7
169	PRP19_CHICK (Q5ZMA2) Pre-mRNA-splicing factor 19 (PRP19/PSO4 hom...	30	3.7
170	COEA1_HUMAN (Q05707) Collagen alpha-1(XIV) chain precursor (Undu...	30	3.7
171	CI112_HUMAN (Q9BTV6) WD repeat-containing protein C9orf112	30	3.7
172	CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain	30	3.7
173	COBA1_RAT (P20909) Collagen alpha-1(XI) chain precursor (Fragment)	30	3.7
174	WD51B_HUMAN (Q8TC44) WD-repeat protein 51B	30	3.7
175	FIE_ARATH (Q9LT47) Polycomb group protein FERTILIZATION-INDEPEND...	30	3.7
176	WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC...	29	4.8
177	COHA1_MESAU (Q9JMH4) Collagen alpha-1(XVII) chain (Bullous pemph...	29	4.8
178	CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor	29	4.8
179	CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Conta...	29	4.8
180	CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contain...	29	4.8
181	PK1IP_MOUSE (Q9DCE5) p21-activated protein kinase-interacting pr...	29	4.8
182	COLE_LEPMA (P98085) Inner ear-specific collagen precursor (Saccu...	29	4.8
183	CO6A1_CHICK (P20785) Collagen alpha-1(VI) chain precursor	29	4.8
184	PRP19_RAT (Q9JMJ4) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homol...	29	4.8
185	PRP19_MOUSE (Q99KP6) Pre-mRNA-splicing factor 19 (PRP19/PSO4 hom...	29	4.8
186	PWP2_NEUCR (Q9C270) Periodic tryptophan protein 2 homolog	29	4.8
187	PLRG1_RAT (Q9WUC8) Pleiotropic regulator 1	29	4.8
188	PLRG1_HUMAN (O43660) Pleiotropic regulator 1	29	4.8
189	CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor	29	4.8
190	LIN23_CAEEL (Q09990) F-box/WD-repeat protein lin-23 (Abnormal ce...	29	4.8
191	CO9A1_MOUSE (Q05722) Collagen alpha-1(IX) chain precursor	29	4.8
192	COPA_HUMAN (P53621) Coatomer subunit alpha (Alpha-coat protein) ...	29	4.8
193	COPA_BOVIN (Q27954) Coatomer subunit alpha (Alpha-coat protein) ...	29	4.8
194	COLQ_HUMAN (Q9Y215) Acetylcholinesterase collagenic tail peptide...	29	4.8
195	GBLP_BRANA (Q39336) Guanine nucleotide-binding protein beta subu...	29	4.8
196	LEUNG_ARATH (Q9FUY2) Transcriptional corepressor LEUNIG	29	4.8
197	CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor	29	4.8
198	PEX7_PICPA (O59894) Peroxisomal targeting signal 2 receptor (PTS...	29	6.3
199	CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor	29	6.3
200	CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor	29	6.3
201	STTP1_RAT (Q496Z0) Stat3-interacting protein (StIP1)	29	6.3
202	CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor	29	6.3
203	WDR34_MOUSE (Q5U4F6) WD-repeat protein 34	29	6.3
204	CO4A3_BOVIN (Q28084) Collagen alpha-3(IV) chain (Fragment)	29	6.3
205	COPB2_YEAST (P41811) Coatomer subunit beta' (Beta'-coat protein)...	29	6.3
206	TUP1_KLULA (P56094) Transcriptional repressor TUP1	29	6.3
207	PLAP_HUMAN (Q9Y263) Phospholipase A-2-activating protein (PLAP) ...	29	6.3
208	MIAA_CAUCR (Q9A6J5) tRNA delta(2)-isopentenylpyrophosphate trans...	29	6.3
209	REC14_SCHPO (Q09150) Meiotic recombination protein rec14	29	6.3
210	GBB_LOLFO (P23232) Guanine nucleotide-binding protein beta subunit	29	6.3
211	YQ35_CAEEL (Q09456) Putative cuticle collagen C09G5.5	29	6.3
212	COEA1_CHICK (P32018) Collagen alpha-1(XIV) chain precursor (Undu...	29	6.3
213	WSB1_HUMAN (Q9Y6I7) WD repeat and SOCS box-containing protein 1 ...	29	6.3
214	WDR24_BRARE (Q7ZVL2) WD-repeat protein 24	29	6.3
215	FIE2_MAIZE (Q8VZY6) Polycomb group protein FIE2 (FERTILIZATION-I...	29	6.3
216	COJA1_HUMAN (Q14993) Collagen alpha-1(XIX) chain precursor (Coll...	29	6.3
217	CO4A4_RABIT (P55787) Collagen alpha-4(IV) chain (Fragment)	29	6.3
218	RUMA_XYLFT (Q87BR3) 23S rRNA (uracil-5-)-methyltransferase rumA ...	29	6.3
219	CO8A2_MOUSE (P25318) Collagen alpha-2(VIII) chain precursor (End...	29	6.3
220	PLAP_MOUSE (P27612) Phospholipase A-2-activating protein (PLAP)	28	8.2
221	CO9A2_MOUSE (Q07643) Collagen alpha-2(IX) chain precursor	28	8.2
222	TAF5_MOUSE (Q8C092) Transcription initiation factor TFIID subuni...	28	8.2
223	YNA6_YEAST (P41318) Hypothetical 34.0 kDa Trp-Asp repeats-contai...	28	8.2
224	PSAD_HORVU (P36213) Photosystem I reaction center subunit II, ch...	28	8.2
225	CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor	28	8.2
226	RAD60_SCHPO (Q9USX3) DNA repair protein rad60	28	8.2
227	DAN1_YEAST (P47178) Cell wall protein DAN1 precursor (Covalently...	28	8.2
228	Y1409_SYNY3 (P73594) Hypothetical WD-repeat protein slr1409	28	8.2
229	PLRG1_MOUSE (Q922V4) Pleiotropic regulator 1	28	8.2
230	LE14B_LITER (Q40153) LEC14B protein	28	8.2
231	APAF_BRARE (Q9I9H8) Apoptotic protease-activating factor 1 (Apaf-1)	28	8.2
232	WDR1_HUMAN (O75083) WD-repeat protein 1 (Actin-interacting prote...	28	8.2
233	PLAP_RAT (P54319) Phospholipase A-2-activating protein (PLAP)	28	8.2
234	LIS1_CAEEL (Q9NDC9) Lissencephaly-1 homolog (Pronuclear migratio...	28	8.2
235	FCER2_HUMAN (P06734) Low affinity immunoglobulin epsilon Fc rece...	28	8.2
236	CO4A1_MOUSE (P02463) Collagen alpha-1(IV) chain precursor	28	8.2
237	CO4A1_HUMAN (P02462) Collagen alpha-1(IV) chain precursor	28	8.2

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>WS17_SCHMA (Q26544) WD-repeat protein SL1-17|
          Length = 301

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
 Frame = +1

Query: 19  AHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVVSLXX 195
           AH++ IW   W    + R    ++TGS+D  + AW+  +          GH LGV+S+  
Sbjct: 11  AHKEGIWCCTWGENRN-RNKQYIITGSLDNGLIAWEWTNSQLKCLYQFEGHRLGVISVDI 69

Query: 196 XXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHP 327
                     S+DS I ++D+++G    T D  P++ W + F P
Sbjct: 70  NSTGTLAASSSLDSQILLWDLETGRLTKTYDGDPADTWTIAFSP 113



 Score = 36.6 bits (83), Expect = 0.030
 Identities = 20/84 (23%), Positives = 36/84 (42%)
 Frame = +1

Query: 82  LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 261
           LL + S D+ ++ +   D  +  P   GH   VVS+            S D  +R++D+ 
Sbjct: 200 LLASASDDKQIKVFDVRDGRLVIPSLNGHKGWVVSVDFASDNRHLVTASTDCSVRIWDLA 259

Query: 262 SGASVTTLDAAPSEVWGVQFHPKG 333
           S       +    +VW  ++ P+G
Sbjct: 260 SKEEKHCFNTHEDQVWCARYSPQG 283

---

>HETE1_PODAN (Q00808) Vegetatible incompatibility protein HET-E-1|
          Length = 1356

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 34/122 (27%), Positives = 49/122 (40%)
 Frame = +1

Query: 22   HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 201
            H DS+W+ A+ P         + +GSID T++ W        +    GH   V S+    
Sbjct: 1092 HGDSVWSVAFSPDGQR-----VASGSIDGTIKIWDAAS-GTCTQTLEGHGGWVHSVAFSP 1145

Query: 202  XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 381
                    SID  I+++D  SG    TL+     V  V F P G            +K+W
Sbjct: 1146 DGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDG-QRVASGSSDKTIKIW 1204

Query: 382  DT 387
            DT
Sbjct: 1205 DT 1206



 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 31/121 (25%), Positives = 47/121 (38%)
 Frame = +1

Query: 22   HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 201
            H  S+W+ A+ P         + +GS D+T++ W        +    GH   V S+    
Sbjct: 1008 HGGSVWSVAFSPDGQR-----VASGSDDKTIKIWDTAS-GTCTQTLEGHGGWVQSVVFSP 1061

Query: 202  XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 381
                    S D  I+++D  SG    TL+     VW V F P G            +K+W
Sbjct: 1062 DGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDG-QRVASGSIDGTIKIW 1120

Query: 382  D 384
            D
Sbjct: 1121 D 1121



 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 27/99 (27%), Positives = 39/99 (39%)
 Frame = +1

Query: 91   TGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGA 270
            +GS D T++ W        +    GH   V+S+            S D  I+++D  SG 
Sbjct: 942  SGSDDHTIKIWDAAS-GTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGT 1000

Query: 271  SVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDT 387
               TL+     VW V F P G            +K+WDT
Sbjct: 1001 CTQTLEGHGGSVWSVAFSPDG-QRVASGSDDKTIKIWDT 1038



 Score = 38.9 bits (89), Expect = 0.006
 Identities = 29/113 (25%), Positives = 42/113 (37%), Gaps = 1/113 (0%)
 Frame = +1

Query: 49   WVPAADHRPTAL-LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXV 225
            WV +    P    + +GS D T++ W        +    GH   V S+            
Sbjct: 1053 WVQSVVFSPDGQRVASGSDDHTIKIWDAVS-GTCTQTLEGHGDSVWSVAFSPDGQRVASG 1111

Query: 226  SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 384
            SID  I+++D  SG    TL+     V  V F P G            +K+WD
Sbjct: 1112 SIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDG-QRVASGSIDGTIKIWD 1163



 Score = 36.6 bits (83), Expect = 0.030
 Identities = 20/74 (27%), Positives = 28/74 (37%)
 Frame = +1

Query: 163  GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXX 342
            GH   V+S+            S D  I+++D  SG    TL+     VW V F P     
Sbjct: 839  GHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDR-ER 897

Query: 343  XXXXXXXXXVKLWD 384
                     +K+WD
Sbjct: 898  VASGSDDKTIKIWD 911

---

>YZLL_CAEEL (Q93847) Hypothetical WD-repeat protein K04G11.4|
          Length = 395

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 34/136 (25%), Positives = 54/136 (39%)
 Frame = +1

Query: 10  VDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSL 189
           +  AH+ SI    + P   +     + +GS D +++ W+ D   V      GH LG+   
Sbjct: 102 IPNAHKKSISGIKFSPDGRY-----MGSGSADCSIKIWRMD--FVYEKTLMGHRLGINEF 154

Query: 190 XXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXX 369
                       S D  ++VFDV SG  V TL    + V+   F+P G            
Sbjct: 155 SWSSDSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSG-TLIASGSFDET 213

Query: 370 VKLWDTEKWXPIASLP 417
           +++W       I S+P
Sbjct: 214 IRIWCARNGNTIFSIP 229

---

>YH92_CAEEL (Q23256) Hypothetical WD-repeat protein ZC302.2|
          Length = 501

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 2/112 (1%)
 Frame = +1

Query: 76  TALLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVF 252
           ++L+ +   DETVR W     L V   PA  H+  + S+            S D  IRV+
Sbjct: 309 SSLIASAGFDETVRVWDFKTGLCVKCIPA--HSDPITSISYNHDGNTMATSSYDGCIRVW 366

Query: 253 DVDSGASVTTL-DAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWXPI 405
           D  SG+ + TL D   + V  V F P G            +KLWD +K  P+
Sbjct: 367 DAASGSCLKTLVDTDHAPVTFVCFSPNG-KYLLSAQLDSSLKLWDPKKAKPL 417



 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 26/109 (23%), Positives = 46/109 (42%)
 Frame = +1

Query: 91  TGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGA 270
           TGS D+ ++ W   D+      A  H LG+               S D+ +++FDV SGA
Sbjct: 230 TGSADKQIKVWNTVDMTYLQTLAS-HQLGINDFSWSSNSQFIASASDDTTVKIFDVISGA 288

Query: 271 SVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWXPIASLP 417
            + T+    + V+   F+P+             V++WD +    +  +P
Sbjct: 289 CLRTMRGHTNYVFCCSFNPQS-SLIASAGFDETVRVWDFKTGLCVKCIP 336

---

>YKY4_CAEEL (Q17963) Hypothetical WD-repeat protein C14B1.4|
          Length = 376

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 32/132 (24%), Positives = 54/132 (40%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 201
           H  SI +A + P   +     L T S D+TV+ W  D + +      GH LGV  +    
Sbjct: 86  HTKSISSAKFSPCGKY-----LGTSSADKTVKIWNMDHM-ICERTLTGHKLGVNDIAWSS 139

Query: 202 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 381
                   S D  +++F++ +     TL    + V+   F+P+             V++W
Sbjct: 140 DSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQS-SLVVSGSFDESVRIW 198

Query: 382 DTEKWXPIASLP 417
           D +    I +LP
Sbjct: 199 DVKTGMCIKTLP 210

---

>KTNB1_BRARE (Q7ZUV2) Katanin p80 WD40-containing subunit B1 homolog|
          Length = 694

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 35/130 (26%), Positives = 53/130 (40%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 201
           H+ SI +  + P  ++     L +GS+D  ++ W            G H   V  L    
Sbjct: 104 HKASISSLDFHPMGEY-----LASGSVDSNIKLWDVRRKGCVFRYKG-HTQAVRCLAFSP 157

Query: 202 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 381
                   S DS ++++D+ +G  +T   +  S V  VQFHP              VKLW
Sbjct: 158 DGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNE-YLLASGSADRTVKLW 216

Query: 382 DTEKWXPIAS 411
           D EK+  I S
Sbjct: 217 DLEKFNMIGS 226



 Score = 34.7 bits (78), Expect = 0.11
 Identities = 26/108 (24%), Positives = 41/108 (37%), Gaps = 4/108 (3%)
 Frame = +1

Query: 82  LLLTGSIDETVRAWQPDDLAVASPPA----GGHALGVVSLXXXXXXXXXXXVSIDSHIRV 249
           LL TG  D  V  W     AV+ P       GH   V  +            S+   +R+
Sbjct: 35  LLATGGEDCRVNIW-----AVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRL 89

Query: 250 FDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 393
           +D+++   + TL    + +  + FHP G            +KLWD  +
Sbjct: 90  WDLEAAKILRTLMGHKASISSLDFHPMG-EYLASGSVDSNIKLWDVRR 136



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 24/100 (24%), Positives = 38/100 (38%)
 Frame = +1

Query: 85  LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 264
           ++ GS+  ++R W  +   +     G H   + SL            S+DS+I+++DV  
Sbjct: 78  VVAGSLSGSLRLWDLEAAKILRTLMG-HKASISSLDFHPMGEYLASGSVDSNIKLWDVRR 136

Query: 265 GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 384
              V         V  + F P G            VKLWD
Sbjct: 137 KGCVFRYKGHTQAVRCLAFSPDG-KWLASASDDSTVKLWD 175

---

>PF20_CHLRE (P93107) Flagellar WD-repeat protein PF20|
          Length = 606

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 37/138 (26%), Positives = 53/138 (38%), Gaps = 7/138 (5%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAG-------GHALGV 180
           H+ +IW+  +     H    ++ +GS+D TVR W   DL     PAG       GH   V
Sbjct: 409 HKQAIWSVRF-----HHLGEVVASGSLDHTVRLW---DL-----PAGKCRMALRGHVDSV 455

Query: 181 VSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXX 360
             L            S D  + V+D  +G    T     +   GV F+  G         
Sbjct: 456 NDLAWQPFSSSLATASSDKTVSVWDARAGLCTQTYYGHQNSCNGVSFNILG-TQLASTDA 514

Query: 361 XXXVKLWDTEKWXPIASL 414
              VKLWDT     +A++
Sbjct: 515 DGVVKLWDTRMTAEVATI 532



 Score = 36.2 bits (82), Expect = 0.039
 Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 2/108 (1%)
 Frame = +1

Query: 67  HRPTALLLTGSIDETVRAWQPD--DLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSH 240
           H    +L+T S D+T + W     DL +      GH   V  +              DS 
Sbjct: 335 HPTKPILVTASDDKTWKMWHMPGGDLIMCGE---GHKDWVAGVDFHPAGTCLASGGGDSA 391

Query: 241 IRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 384
           ++++D +    VTT       +W V+FH  G            V+LWD
Sbjct: 392 VKIWDFEKQRCVTTFTDHKQAIWSVRFHHLG-EVVASGSLDHTVRLWD 438



 Score = 31.6 bits (70), Expect = 0.97
 Identities = 21/77 (27%), Positives = 29/77 (37%)
 Frame = +1

Query: 163 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXX 342
           GH L V +L            S D   +++ +  G  +   +     V GV FHP G   
Sbjct: 324 GHLLSVANLALHPTKPILVTASDDKTWKMWHMPGGDLIMCGEGHKDWVAGVDFHPAG-TC 382

Query: 343 XXXXXXXXXVKLWDTEK 393
                    VK+WD EK
Sbjct: 383 LASGGGDSAVKIWDFEK 399

---

>PKWA_THECU (P49695) Probable serine/threonine-protein kinase pkwA (EC|
           2.7.11.1)
          Length = 742

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 35/115 (30%), Positives = 46/115 (40%), Gaps = 3/115 (2%)
 Frame = +1

Query: 49  WVPAADHRPT-ALLLTGSIDETVRAWQPDDLAVASPPA--GGHALGVVSLXXXXXXXXXX 219
           WV A    P  ALL +GS D TVR W   D+A A   A   GH   V+ +          
Sbjct: 503 WVRAVAFSPDGALLASGSDDATVRLW---DVAAAEERAVFEGHTHYVLDIAFSPDGSMVA 559

Query: 220 XVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 384
             S D   R+++V +G     L      V+ V F P G            ++LWD
Sbjct: 560 SGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDG-SMVASGSRDGTIRLWD 613



 Score = 34.3 bits (77), Expect = 0.15
 Identities = 29/107 (27%), Positives = 40/107 (37%), Gaps = 4/107 (3%)
 Frame = +1

Query: 73  PTALLLTGSIDETVRAWQPDDLAVASPPA----GGHALGVVSLXXXXXXXXXXXVSIDSH 240
           P   +L    D TV  W      VAS  A     GH   V ++            S D  
Sbjct: 637 PDGSMLVHGSDSTVHLWD-----VASGEALHTFEGHTDWVRAVAFSPDGALLASGSDDRT 691

Query: 241 IRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 381
           IR++DV +    TTL+     V  V FHP+G            +++W
Sbjct: 692 IRLWDVAAQEEHTTLEGHTEPVHSVAFHPEG-TTLASASEDGTIRIW 737

---

>UTP13_SCHPO (Q9USN3) Probable U3 small nucleolar RNA-associated protein 13 (U3|
           snoRNA-associated protein 13)
          Length = 777

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 25/98 (25%), Positives = 39/98 (39%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 201
           H   +WA ++ P +       L +GS D T+R W  D          GH   ++ L    
Sbjct: 506 HRRGVWACSFNPFSRQ-----LASGSGDRTIRIWNVDTQQCVQT-LEGHTGAILKLIYIS 559

Query: 202 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGV 315
                   + D  ++V+ + SG  V TLD     VW +
Sbjct: 560 QGTQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWAL 597



 Score = 29.3 bits (64), Expect = 4.8
 Identities = 24/111 (21%), Positives = 43/111 (38%)
 Frame = +1

Query: 82  LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 261
           ++ + S D+T++ W      V      GH  GV +             S D  IR+++VD
Sbjct: 479 IIASASQDKTIKLWDSSTGEVVGV-LRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVD 537

Query: 262 SGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWXPIASL 414
           +   V TL+     +  + +  +G            VK+W       +A+L
Sbjct: 538 TQQCVQTLEGHTGAILKLIYISQG-TQVVSAAADGLVKVWSLSSGECVATL 587

---

>YY46_ANASP (Q8YRI1) Hypothetical WD-repeat protein alr3466|
          Length = 1526

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 32/106 (30%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
 Frame = +1

Query: 79   ALLLTGSIDETVRAWQPDDLAVASPPA----GGHALGVVSLXXXXXXXXXXXVSIDSHIR 246
            ++L TGS D+TVR W      ++S        GH   V S+            S D  +R
Sbjct: 1003 SMLATGSGDQTVRLWD-----ISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVR 1057

Query: 247  VFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 384
            ++D+ SG  + TL    S V  V F P G            V+LWD
Sbjct: 1058 LWDISSGNCLYTLQGHTSCVRSVVFSPDG-AMLASGGDDQIVRLWD 1102



 Score = 38.5 bits (88), Expect = 0.008
 Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 1/113 (0%)
 Frame = +1

Query: 49   WVPAADHRPT-ALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXV 225
            WV A    P  A L +GS D+TVR W     +       GH   V S+            
Sbjct: 1160 WVNAVAFSPDGATLASGSGDQTVRLWDISS-SKCLYILQGHTSWVNSVVFNPDGSTLASG 1218

Query: 226  SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 384
            S D  +R+++++S   + T     S V  V F+P G            V+LWD
Sbjct: 1219 SSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDG-SMLASGSSDKTVRLWD 1270



 Score = 37.7 bits (86), Expect = 0.014
 Identities = 33/123 (26%), Positives = 49/123 (39%), Gaps = 1/123 (0%)
 Frame = +1

Query: 49   WVPAADHRPT-ALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXV 225
            WV +    P  A+L +GS D+TVR W             GH   V S+            
Sbjct: 1370 WVGSVIFSPDGAILASGSGDQTVRLWSISS-GKCLYTLQGHNNWVGSIVFSPDGTLLASG 1428

Query: 226  SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWXPI 405
            S D  +R++++ SG  + TL    + V  V F   G+           +KLWD +    I
Sbjct: 1429 SDDQTVRLWNISSGECLYTLHGHINSVRSVAFSSDGL-ILASGSDDETIKLWDVKTGECI 1487

Query: 406  ASL 414
             +L
Sbjct: 1488 KTL 1490



 Score = 37.7 bits (86), Expect = 0.014
 Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
 Frame = +1

Query: 79   ALLLTGSIDETVRAWQPDDLAVAS--PPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVF 252
            A+L +GS D+TVR W   D++  +      GH   V S+              D  +R++
Sbjct: 1045 AMLASGSDDQTVRLW---DISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLW 1101

Query: 253  DVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 384
            D+ SG  + TL    S V  + F P G+           V+LWD
Sbjct: 1102 DISSGNCLYTLQGYTSWVRFLVFSPNGV-TLANGSSDQIVRLWD 1144



 Score = 36.6 bits (83), Expect = 0.030
 Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 1/114 (0%)
 Frame = +1

Query: 46   AWVPAADHRPT-ALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXX 222
            +WV +    P  + L +GS D+TVR W+ +  +       GH   V S+           
Sbjct: 1201 SWVNSVVFNPDGSTLASGSSDQTVRLWEINS-SKCLCTFQGHTSWVNSVVFNPDGSMLAS 1259

Query: 223  VSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 384
             S D  +R++D+ S   + T     + V  V F+P G            V+LW+
Sbjct: 1260 GSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDG-SMLASGSGDQTVRLWE 1312



 Score = 34.7 bits (78), Expect = 0.11
 Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 1/112 (0%)
 Frame = +1

Query: 49   WVPAADHRPT-ALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXV 225
            WV +    P  ++L +GS D+TVR W+    +       GH   V S+            
Sbjct: 1286 WVNSVAFNPDGSMLASGSGDQTVRLWEISS-SKCLHTFQGHTSWVSSVTFSPDGTMLASG 1344

Query: 226  SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 381
            S D  +R++ + SG  + T     + V  V F P G            V+LW
Sbjct: 1345 SDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDG-AILASGSGDQTVRLW 1395



 Score = 34.3 bits (77), Expect = 0.15
 Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 1/113 (0%)
 Frame = +1

Query: 46   AWVPAADHRPT-ALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXX 222
            +WV +    P  ++L +GS D+TVR W     +       GH   V S+           
Sbjct: 1243 SWVNSVVFNPDGSMLASGSSDKTVRLWDISS-SKCLHTFQGHTNWVNSVAFNPDGSMLAS 1301

Query: 223  VSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 381
             S D  +R++++ S   + T     S V  V F P G            V+LW
Sbjct: 1302 GSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDG-TMLASGSDDQTVRLW 1353



 Score = 34.3 bits (77), Expect = 0.15
 Identities = 26/101 (25%), Positives = 38/101 (37%)
 Frame = +1

Query: 82   LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 261
            +L +GS D+TVR W             GH   V S+            S D  +R++D+ 
Sbjct: 920  MLASGSDDQTVRLWDISS-GQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDIS 978

Query: 262  SGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 384
            SG  +         V+ V F+  G            V+LWD
Sbjct: 979  SGECLYIFQGHTGWVYSVAFNLDG-SMLATGSGDQTVRLWD 1018



 Score = 29.3 bits (64), Expect = 4.8
 Identities = 29/109 (26%), Positives = 41/109 (37%), Gaps = 5/109 (4%)
 Frame = +1

Query: 73   PTALLL-TGSIDETVRAWQPDDLAVASPPA----GGHALGVVSLXXXXXXXXXXXVSIDS 237
            P +L+L +GS D+TVR W      ++S        GH   V S+            S D 
Sbjct: 958  PNSLMLASGSSDQTVRLWD-----ISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQ 1012

Query: 238  HIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 384
             +R++D+ S           S V  V F   G            V+LWD
Sbjct: 1013 TVRLWDISSSQCFYIFQGHTSCVRSVVFSSDG-AMLASGSDDQTVRLWD 1060

---

>TAF5_DROME (P49846) Transcription initiation factor TFIID subunit 5|
           (Transcription initiation factor TFIID 85 kDa subunit)
           (p85) (TAFII-80)
          Length = 704

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
 Frame = +1

Query: 67  HRPTALLLTGSIDETVRAWQPDDLAVASPPA-GGHALGVVSLXXXXXXXXXXXVSIDSHI 243
           H  +  + TGS D TVR W  D++   S     GH   V SL            S+D +I
Sbjct: 543 HPNSNYVATGSSDRTVRLW--DNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNI 600

Query: 244 RVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 393
            ++D+ +G+ VTTL    S V  + F   G            + LWD  K
Sbjct: 601 IIWDLSNGSLVTTLLRHTSTVTTITFSRDG-TVLAAAGLDNNLTLWDFHK 649



 Score = 32.3 bits (72), Expect = 0.57
 Identities = 30/121 (24%), Positives = 44/121 (36%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 201
           H   ++  A+ P  +     LLL+ S D T+R W     +      G H   V  +    
Sbjct: 449 HTGPVYRCAFAPEMN-----LLLSCSEDSTIRLWSLLTWSCVVTYRG-HVYPVWDVRFAP 502

Query: 202 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 381
                   S D   R++  DS  ++       S+V  VQFHP              V+LW
Sbjct: 503 HGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNS-NYVATGSSDRTVRLW 561

Query: 382 D 384
           D
Sbjct: 562 D 562

---

>WDR5_MOUSE (P61965) WD-repeat protein 5 (BMP2-induced 3-kb gene protein)|
           (WD-repeat protein BIG-3)
          Length = 334

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 25/111 (22%), Positives = 45/111 (40%)
 Frame = +1

Query: 85  LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 264
           L + S D+ ++ W   D         GH LG+  +            S D  ++++DV S
Sbjct: 60  LASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 118

Query: 265 GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWXPIASLP 417
           G  + TL    + V+   F+P+             V++WD +    + +LP
Sbjct: 119 GKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLP 168



 Score = 34.3 bits (77), Expect = 0.15
 Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
 Frame = +1

Query: 82  LLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDV 258
           L+++GS DE+VR W       + + PA  H+  V ++            S D   R++D 
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPA--HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200

Query: 259 DSGASVTTL-DAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 393
            SG  + TL D     V  V+F P G            +KLWD  K
Sbjct: 201 ASGQCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSK 245

---

>WDR5_HUMAN (P61964) WD-repeat protein 5 (BMP2-induced 3-kb gene protein)|
          Length = 334

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 25/111 (22%), Positives = 45/111 (40%)
 Frame = +1

Query: 85  LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 264
           L + S D+ ++ W   D         GH LG+  +            S D  ++++DV S
Sbjct: 60  LASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 118

Query: 265 GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWXPIASLP 417
           G  + TL    + V+   F+P+             V++WD +    + +LP
Sbjct: 119 GKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLP 168



 Score = 34.3 bits (77), Expect = 0.15
 Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
 Frame = +1

Query: 82  LLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDV 258
           L+++GS DE+VR W       + + PA  H+  V ++            S D   R++D 
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPA--HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200

Query: 259 DSGASVTTL-DAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 393
            SG  + TL D     V  V+F P G            +KLWD  K
Sbjct: 201 ASGQCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSK 245

---

>SEL10_CAEEL (Q93794) F-box/WD-repeat protein sel-10 (Suppressor/enhancer of|
           lin-12) (Sel-10 protein)
          Length = 587

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 6/118 (5%)
 Frame = +1

Query: 79  ALLLTGSIDETVRAWQPDDLAVASPPAGGHAL----GVVSLXXXXXXXXXXXVSI--DSH 240
           +++ +GS+D ++R W        + P G   +    G  SL           VS   DSH
Sbjct: 431 SIVCSGSLDTSIRVWD------FTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSH 484

Query: 241 IRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWXPIASL 414
           +RV+D+  G  V  L    S +  +Q+   G            VKLWD E+   I  L
Sbjct: 485 VRVWDIHEGTCVHMLSGHRSAITSLQWF--GRNMVATSSDDGTVKLWDIERGALIRDL 540



 Score = 32.7 bits (73), Expect = 0.44
 Identities = 29/110 (26%), Positives = 46/110 (41%)
 Frame = +1

Query: 85  LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 264
           +++GS D TV+ W   D ++      GH   V  +            S D+ +RV+DV+S
Sbjct: 311 IVSGSTDRTVKVWSTVDGSLLHT-LQGHTSTVRCMAMAGSILVTG--SRDTTLRVWDVES 367

Query: 265 GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWXPIASL 414
           G  + TL    + V  VQF    +           VK+W+      I +L
Sbjct: 368 GRHLATLHGHHAAVRCVQFDGTTV---VSGGYDFTVKIWNAHTGRCIRTL 414

---

>Y2800_ANASP (Q8YTC2) Hypothetical WD-repeat protein alr2800|
          Length = 1258

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 30/116 (25%), Positives = 46/116 (39%)
 Frame = +1

Query: 37   WAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXX 216
            WA   +P A      +L +GS D+TV+ W        S    GH   +  +         
Sbjct: 938  WA---LPVAFSPDRQILASGSNDKTVKLWDWQTGKYISS-LEGHTDFIYGIAFSPDSQTL 993

Query: 217  XXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 384
               S DS +R++++ +G     L      V+ V FHP+G            VKLW+
Sbjct: 994  ASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFHPQG-KIIATGSADCTVKLWN 1048



 Score = 36.2 bits (82), Expect = 0.039
 Identities = 30/120 (25%), Positives = 46/120 (38%)
 Frame = +1

Query: 31  SIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXX 210
           +I +AA+ P        LL T   D  VR W+     +      GH+  V  +       
Sbjct: 644 NILSAAFSPEGQ-----LLATCDTDCHVRVWEVKSGKLLLI-CRGHSNWVRFVVFSPDGE 697

Query: 211 XXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTE 390
                  D +++++ V  G  + TL     EV+ V FHP G            +KLWD +
Sbjct: 698 ILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDG-ETLASASGDKTIKLWDIQ 756

---

>WDS_DROME (Q9V3J8) Protein will die slowly|
          Length = 361

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 33/129 (25%), Positives = 53/129 (41%)
 Frame = +1

Query: 1   FKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGV 180
           F+     H+  I   AW  ++D R   LL++GS D+T++ W+      +     GH+  V
Sbjct: 106 FEKTISGHKLGISDVAW--SSDSR---LLVSGSDDKTLKVWEL-STGKSLKTLKGHSNYV 159

Query: 181 VSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXX 360
                          S D  +R++DV +G  + TL A    V  V F+  G         
Sbjct: 160 FCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG-SLIVSSSY 218

Query: 361 XXXVKLWDT 387
               ++WDT
Sbjct: 219 DGLCRIWDT 227



 Score = 36.2 bits (82), Expect = 0.039
 Identities = 24/111 (21%), Positives = 45/111 (40%)
 Frame = +1

Query: 85  LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 264
           L + S D+ ++ W   D         GH LG+  +            S D  ++V+++ +
Sbjct: 87  LASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELST 145

Query: 265 GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWXPIASLP 417
           G S+ TL    + V+   F+P+             V++WD      + +LP
Sbjct: 146 GKSLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKCLKTLP 195



 Score = 33.9 bits (76), Expect = 0.20
 Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
 Frame = +1

Query: 82  LLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDV 258
           L+++GS DE+VR W       + + PA  H+  V ++            S D   R++D 
Sbjct: 170 LIVSGSFDESVRIWDVRTGKCLKTLPA--HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 227

Query: 259 DSGASVTTL-DAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 393
            SG  + TL D     V  V+F P G            +KLWD  K
Sbjct: 228 ASGQCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSK 272

---

>TUP11_SCHPO (Q09715) Transcriptional repressor tup11|
          Length = 614

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 13/117 (11%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ-------------PDDLAVASPPAG 162
           H++S+++ A+ P      +++LL+GS+D+T++ W+             P+ +  A+    
Sbjct: 483 HKESVYSIAFSP-----DSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKAT--YT 535

Query: 163 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKG 333
           GH   V+S+            S D  ++ +D+ +G S  T     + V  V F P G
Sbjct: 536 GHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDG 592

---

>SWD3_SCHPO (O43017) Set1 complex component swd3 (Set1C component swd3)|
           (COMPASS component swd3) (Complex proteins associated
           with set1 protein swd3)
          Length = 380

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
 Frame = +1

Query: 49  WVPAADHRPTA-LLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVVSLXXXXXXXXXXX 222
           +V + D  P   LL++GS DETVR W   D   +   PA  H+  ++S+           
Sbjct: 140 YVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPA--HSEPIISVSISADGTLCAT 197

Query: 223 VSIDSHIRVFDVDSGASVTTL 285
            S D   R++DV SG  + TL
Sbjct: 198 ASYDGMARIWDVLSGQCLKTL 218



 Score = 33.1 bits (74), Expect = 0.33
 Identities = 24/111 (21%), Positives = 41/111 (36%)
 Frame = +1

Query: 85  LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 264
           + T S D T++ W      +      GH  G+  +            S D  IR++D + 
Sbjct: 69  IATSSSDGTIKIWSALTFRLECT-LFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEK 127

Query: 265 GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWXPIASLP 417
             SV  L    + V  + F+P G            V++W+ +    +  LP
Sbjct: 128 RCSVRCLKGHTNYVSSIDFNPLG-TLLVSGSWDETVRIWNLQDGTCLRMLP 177

---

>PRP4_HUMAN (O43172) U4/U6 small nuclear ribonucleoprotein Prp4 (U4/U6 snRNP 60|
           kDa protein) (WD splicing factor Prp4) (hPrp4)
          Length = 522

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 19/85 (22%), Positives = 37/85 (43%)
 Frame = +1

Query: 163 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXX 342
           GH++GV  +             +D+  RV+D+ +G  +  L+    E++G+ F P G   
Sbjct: 363 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNG-YH 421

Query: 343 XXXXXXXXXVKLWDTEKWXPIASLP 417
                     K+WD  +   + ++P
Sbjct: 422 IATGSGDNTCKVWDLRQRRCVYTIP 446

---

>PRP4_PONPY (Q5NVD0) U4/U6 small nuclear ribonucleoprotein Prp4 (U4/U6 snRNP 60|
           kDa protein) (WD splicing factor Prp4)
          Length = 521

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 19/85 (22%), Positives = 37/85 (43%)
 Frame = +1

Query: 163 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXX 342
           GH++GV  +             +D+  RV+D+ +G  +  L+    E++G+ F P G   
Sbjct: 362 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNG-YH 420

Query: 343 XXXXXXXXXVKLWDTEKWXPIASLP 417
                     K+WD  +   + ++P
Sbjct: 421 IATGSGDNTCKVWDLRQRRCVYTIP 445

---

>PRP4_MOUSE (Q9DAW6) U4/U6 small nuclear ribonucleoprotein Prp4 (U4/U6 snRNP 60|
           kDa protein) (WD splicing factor Prp4)
          Length = 521

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 19/85 (22%), Positives = 37/85 (43%)
 Frame = +1

Query: 163 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXX 342
           GH++GV  +             +D+  RV+D+ +G  +  L+    E++G+ F P G   
Sbjct: 362 GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNG-YH 420

Query: 343 XXXXXXXXXVKLWDTEKWXPIASLP 417
                     K+WD  +   + ++P
Sbjct: 421 IATGSGDNTCKVWDLRQRRCVYTIP 445

---

>RCO1_NEUCR (P78706) Transcriptional repressor rco-1|
          Length = 604

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 19/139 (13%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ---PDDLAVASPPAG--------GH 168
           H+DS+++ A+ P   +     L++GS+D+T++ W+   P  +  ++PP G        GH
Sbjct: 470 HKDSVYSVAFSPDGRN-----LVSGSLDKTIKMWELSAPRGIPSSAPPKGGRCIKTFEGH 524

Query: 169 ALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASV--------TTLDAAPSEVWGVQFH 324
              V+S+            S D  ++ +D  +G +         + +  APS V G    
Sbjct: 525 RDFVLSVALTPDSQWVLSGSKDRGVQFWDPRTGHTQLMLQGHKNSVISVAPSPVTG---- 580

Query: 325 PKGIXXXXXXXXXXXVKLW 381
           P G+            ++W
Sbjct: 581 PNGVGYFATGSGDMRARIW 599

---

>Y2124_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124|
          Length = 1683

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 24/101 (23%), Positives = 38/101 (37%)
 Frame = +1

Query: 85   LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 264
            + +GS+D+T++ W  D     +    GH   V S+              D  I+++    
Sbjct: 1087 IASGSLDKTIKLWSRDGRLFRT--LNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSD 1144

Query: 265  GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDT 387
            G  + T+      V  V F P G            +KLWDT
Sbjct: 1145 GTLLKTITGHEQTVNNVYFSPDG-KNLASASSDHSIKLWDT 1184



 Score = 37.0 bits (84), Expect = 0.023
 Identities = 25/120 (20%), Positives = 52/120 (43%)
 Frame = +1

Query: 22   HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 201
            H   ++A  ++P ++     ++ + S+D T+R WQ   ++     AG    GV ++    
Sbjct: 1321 HSGGVYAVNFLPDSN-----IIASASLDNTIRLWQRPLISPLEVLAGNS--GVYAVSFLH 1373

Query: 202  XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 381
                      D +I+++    G+ + TL    + ++G+ F P+G            VK+W
Sbjct: 1374 DGSIIATAGADGNIQLWHSQDGSLLKTLPGNKA-IYGISFTPQG-DLIASANADKTVKIW 1431



 Score = 32.0 bits (71), Expect = 0.74
 Identities = 26/105 (24%), Positives = 45/105 (42%)
 Frame = +1

Query: 19   AHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXX 198
            AH D +++  + P       ++L + S D+TV+ W+  D  +      GH+  V S    
Sbjct: 1528 AHNDLVYSVNFNPDG-----SMLASTSADKTVKLWRSHDGHLLH-TFSGHSNVVYSSSFS 1581

Query: 199  XXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKG 333
                     S D  ++++ +D G  +TTL    + V    F P G
Sbjct: 1582 PDGRYIASASEDKTVKIWQID-GHLLTTLPQHQAGVMSAIFSPDG 1625



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 32/168 (19%), Positives = 59/168 (35%), Gaps = 41/168 (24%)
 Frame = +1

Query: 1    FKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDD--------------- 135
            F++++G HED++++ ++ P         + +G  D+T++ WQ  D               
Sbjct: 1106 FRTLNG-HEDAVYSVSFSPDGQ-----TIASGGSDKTIKLWQTSDGTLLKTITGHEQTVN 1159

Query: 136  ----------LAVASPPAG----------------GHALGVVSLXXXXXXXXXXXVSIDS 237
                      LA AS                    GH+ GV+++            S D 
Sbjct: 1160 NVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDK 1219

Query: 238  HIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 381
             ++++    G  + TL+     V  + F P G            +KLW
Sbjct: 1220 TVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDG-KTLASASADKTIKLW 1266

---

>WDR39_HUMAN (O76071) WD-repeat protein 39 (Ciao 1 protein)|
          Length = 339

 Score = 37.4 bits (85), Expect = 0.018
 Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 4/108 (3%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPD--DLAVASPPAGGHALGVVSLXX 195
           HE+ + + AW P+ +     LL T S D++V  W+ D  D          H   V  +  
Sbjct: 104 HENEVKSVAWAPSGN-----LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVW 158

Query: 196 XXXXXXXXXVSIDSHIRVF--DVDSGASVTTLDAAPSEVWGVQFHPKG 333
                     S D  ++++  + D      TL+   S VW + F P G
Sbjct: 159 HPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSG 206

---

>CO5A1_HUMAN (P20908) Collagen alpha-1(V) chain precursor|
          Length = 1838

 Score = 36.2 bits (82), Expect = 0.039
 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 34
            PG    +G   E+ P    GRDG    VGLPG  G V   GE+  +G +   G  G + D
Sbjct: 1113 PGPAGEKGAPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGD 1172

Query: 33   R 31
            +
Sbjct: 1173 K 1173



 Score = 32.3 bits (72), Expect = 0.57
 Identities = 20/57 (35%), Positives = 25/57 (43%)
 Frame = -1

Query: 210  DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
            +PG   S+GD  E+ PP   G  G I G PG  G     G   ++G     G  G R
Sbjct: 1163 EPGQKGSKGDKGEQGPPGPTGPQGPI-GQPGPSGADGEPGPRGQQGLFGQKGDEGPR 1218



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 21/54 (38%), Positives = 22/54 (40%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
            PG     GD  +  PP   G  G   G PGADG     G     GAV   G PG
Sbjct: 1236 PGEKGETGDVGQMGPPGPPGPRGPS-GAPGADGPQGPPGGIGNPGAVGEKGEPG 1288



 Score = 28.9 bits (63), Expect = 6.3
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           +PG     G      PP   G  G+  + G+PGADG     G+E   G     G PG
Sbjct: 725 NPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPG 781



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 27/77 (35%), Positives = 32/77 (41%), Gaps = 9/77 (11%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRP- 37
            PG +  +G   E  P    G  G   G PG  GL   AG+E  +G    +G PG  G P 
Sbjct: 996  PGVVGPQGPTGETGPMGERGHPGP-PGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPG 1054

Query: 36   ------DRVLVSPVHRL 4
                  DR L  PV  L
Sbjct: 1055 LRGFPGDRGLPGPVGAL 1071

---

>KTNB1_CHICK (Q5ZIU8) Katanin p80 WD40-containing subunit B1 (Katanin p80|
           subunit B1) (p80 katanin)
          Length = 657

 Score = 36.2 bits (82), Expect = 0.039
 Identities = 27/104 (25%), Positives = 38/104 (36%)
 Frame = +1

Query: 82  LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 261
           LL TG  D  V  W     A       GH   + SL            S    IRV+D++
Sbjct: 35  LLATGGDDCQVNVWSVK--AQLRHELTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLE 92

Query: 262 SGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 393
           +   + TL    + +  + FHP G            +KLWD  +
Sbjct: 93  AAKILRTLLGHKANICSLDFHPYG-SFVASGSLDTDIKLWDVRR 135



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 23/101 (22%), Positives = 39/101 (38%)
 Frame = +1

Query: 82  LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 261
           L++ GS   ++R W  +   +     G H   + SL            S+D+ I+++DV 
Sbjct: 76  LIVAGSQSGSIRVWDLEAAKILRTLLG-HKANICSLDFHPYGSFVASGSLDTDIKLWDVR 134

Query: 262 SGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 384
               +    +    V  ++F P G            VKLWD
Sbjct: 135 RKGCIFKYKSHTQAVRCLRFSPDG-KWLASAADDHTVKLWD 174

---

>PRP46_CANAL (Q5A7Q3) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing|
           protein 46)
          Length = 389

 Score = 35.8 bits (81), Expect = 0.052
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 5/132 (3%)
 Frame = +1

Query: 4   KSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVV 183
           +++ GAH+  I A A     D       +TGS D T++ W  ++ ++ +    GH LG+ 
Sbjct: 78  RTLAGAHQGWIRAIA----LDEITNKWYVTGSADSTIKIWDFENNSLKA-VLTGHVLGIR 132

Query: 184 SLXXXXXXXXXXXVSIDSHIRVFDV-----DSGASVTTLDAAPSEVWGVQFHPKGIXXXX 348
           SL              D  +R +D+     D+G  + +       V+ +  HP+ +    
Sbjct: 133 SLCISKRHPYLFSGGEDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIGLHPE-LDVLF 191

Query: 349 XXXXXXXVKLWD 384
                  V++WD
Sbjct: 192 SGGKDCVVRVWD 203

---

>UTP13_YEAST (Q05946) U3 small nucleolar RNA-associated protein 13 (U3|
           snoRNA-associated protein 13)
          Length = 817

 Score = 35.8 bits (81), Expect = 0.052
 Identities = 22/78 (28%), Positives = 32/78 (41%)
 Frame = +1

Query: 82  LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 261
           LL T S D+TV+ W  D  +V      GH   V                 D  I+++D  
Sbjct: 547 LLATSSGDKTVKIWSLDTFSVMKT-LEGHTNAVQRCSFINKQKQLISCGADGLIKIWDCS 605

Query: 262 SGASVTTLDAAPSEVWGV 315
           SG  + TLD   + +W +
Sbjct: 606 SGECLKTLDGHNNRLWAL 623

---

>CO5A1_CRILO (Q60467) Collagen alpha-1(V) chain precursor|
          Length = 1840

 Score = 35.8 bits (81), Expect = 0.052
 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 34
            PG    +G   E+ P    GRDG    VGLPG  G V   GE+  +G +   G  G + D
Sbjct: 1115 PGPAGEKGVPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGD 1174

Query: 33   R 31
            +
Sbjct: 1175 K 1175



 Score = 33.1 bits (74), Expect = 0.33
 Identities = 20/57 (35%), Positives = 25/57 (43%)
 Frame = -1

Query: 210  DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
            +PG   S+GD  E+ PP   G  G I G PG  G     G   ++G     G  G R
Sbjct: 1165 EPGQKGSKGDKGEQGPPGPTGPQGPI-GQPGPSGADGEPGPRGQQGLFGQKGDEGSR 1220



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 21/54 (38%), Positives = 22/54 (40%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
            PG     GD  +  PP   G  G   G PGADG     G     GAV   G PG
Sbjct: 1238 PGEKGETGDVGQMGPPGPPGPRGPS-GAPGADGPQGPPGGIGNPGAVGEKGEPG 1290



 Score = 28.9 bits (63), Expect = 6.3
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           +PG     G      PP   G  G+  + G+PGADG     G+E   G     G PG
Sbjct: 727 NPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPG 783



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 17/72 (23%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGE--------IVGLPGA---------DGLVDRAGEEQ 82
           +PG M  +G    + PP   G+ G           G+PG          DGL    GE+ 
Sbjct: 586 EPGDMGPQGPRGVQGPPGPTGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKG 645

Query: 81  RRGAVVSSGHPG 46
            RG    SG PG
Sbjct: 646 HRGDPGPSGPPG 657

---

>DOA1_YEAST (P36037) Protein DOA1|
          Length = 715

 Score = 35.8 bits (81), Expect = 0.052
 Identities = 32/124 (25%), Positives = 52/124 (41%)
 Frame = +1

Query: 19  AHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXX 198
           AH  S+W A  V  ++++     LT S D+T++ WQ D   V    +G H   VV     
Sbjct: 135 AHNASVWDAKVVSFSENK----FLTASADKTIKLWQND--KVIKTFSGIHN-DVVRHLAV 187

Query: 199 XXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKL 378
                    S D  I++ D+ +G  + T +   S V+ ++  P G            V++
Sbjct: 188 VDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG--DIVSCGEDRTVRI 245

Query: 379 WDTE 390
           W  E
Sbjct: 246 WSKE 249

---

>LIS1_DROME (Q7KNS3) Lissencephaly-1 homolog (Lissencephaly1) (Dlis1) (DLis-1)|
          Length = 411

 Score = 35.4 bits (80), Expect = 0.067
 Identities = 33/136 (24%), Positives = 47/136 (34%), Gaps = 15/136 (11%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAA---------------DHRPTALLLTGSIDETVRAWQPDDLAVASPP 156
           HE ++   AW P A                H     L +GS D+T+R W    + +    
Sbjct: 276 HEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDV-SVGLCLLT 334

Query: 157 AGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGI 336
             GH   V  L            S D  IRV+D+ +   + TL A       + FH K  
Sbjct: 335 LSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFH-KAH 393

Query: 337 XXXXXXXXXXXVKLWD 384
                      VK+W+
Sbjct: 394 PYVISGSVDQTVKVWE 409

---

>CO5A1_MOUSE (O88207) Collagen alpha-1(V) chain precursor|
          Length = 1838

 Score = 35.4 bits (80), Expect = 0.067
 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 34
            PG    +G   E+ P    GRDG    VGLPG  G V   GE+  +G +   G  G + D
Sbjct: 1113 PGPAGEKGLPGEKGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGD 1172

Query: 33   R 31
            +
Sbjct: 1173 K 1173



 Score = 33.1 bits (74), Expect = 0.33
 Identities = 20/57 (35%), Positives = 25/57 (43%)
 Frame = -1

Query: 210  DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
            +PG   S+GD  E+ PP   G  G I G PG  G     G   ++G     G  G R
Sbjct: 1163 EPGQKGSKGDKGEQGPPGPTGPQGPI-GQPGPSGADGEPGPRGQQGLFGQKGDEGSR 1218



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 22/58 (37%), Positives = 23/58 (39%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 34
            PG     GD  +  PP   G  G   G PGADG     G     GAV   G PG   D
Sbjct: 1236 PGEKGETGDVGQMGPPGPPGPRGPS-GAPGADGPQGPPGGIGNPGAVGEKGEPGEAGD 1292



 Score = 28.9 bits (63), Expect = 6.3
 Identities = 27/77 (35%), Positives = 32/77 (41%), Gaps = 9/77 (11%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRP- 37
            PG +  +G   E  P    G  G   G PG  GL   AG+E  +G    +G PG  G P 
Sbjct: 996  PGVVGPQGPTGETGPMGERGHPGP-PGPPGEQGLPGAAGKEGTKGDPGPAGLPGKDGPPG 1054

Query: 36   ------DRVLVSPVHRL 4
                  DR L  PV  L
Sbjct: 1055 LRGFPGDRGLPGPVGAL 1071



 Score = 28.9 bits (63), Expect = 6.3
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           +PG     G      PP   G  G+  + G+PGADG     G+E   G     G PG
Sbjct: 725 NPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPG 781



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 17/72 (23%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGE--------IVGLPGA---------DGLVDRAGEEQ 82
           +PG M  +G    + PP   G+ G           G+PG          DGL    GE+ 
Sbjct: 584 EPGDMGPQGPRGVQGPPGPTGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKG 643

Query: 81  RRGAVVSSGHPG 46
            RG    SG PG
Sbjct: 644 HRGDPGPSGPPG 655

---

>GBB2_CAEEL (Q20636) Guanine nucleotide-binding protein beta subunit 2|
          Length = 356

 Score = 35.4 bits (80), Expect = 0.067
 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
 Frame = +1

Query: 70  RPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSI--DSHI 243
           R   L+LTGS D T   W  +   +      GH   V ++           +S   D H 
Sbjct: 166 RSDNLILTGSGDSTCAIWDVESGQLIQN-FHGHTGDVFAIDVPKCDTGNTFISAGADKHS 224

Query: 244 RVFDVDSGASVTTLDAAPSEVWGVQFHPKG 333
            V+D+ SG  V + +   +++  V+FHP G
Sbjct: 225 LVWDIRSGQCVQSFEGHEADINTVRFHPNG 254

---

>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor|
          Length = 1496

 Score = 35.4 bits (80), Expect = 0.067
 Identities = 24/59 (40%), Positives = 28/59 (47%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 34
           DPG +   G   ER  P  G R     G PG+DGL    G +  RG V SSG  G + D
Sbjct: 505 DPGTLGPPGPVGERGAP--GNR-----GFPGSDGLPGPKGAQGERGPVGSSGPKGSQGD 556



 Score = 33.1 bits (74), Expect = 0.33
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           PG +   G   ER  P   G  G I GLPG  G+    G +  +G+   SG PG
Sbjct: 698 PGAVGPLGPRGERGNPGERGEPG-ITGLPGEKGMAGGHGPDGPKGSPGPSGTPG 750



 Score = 32.3 bits (72), Expect = 0.57
 Identities = 19/54 (35%), Positives = 23/54 (42%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           PG    +G      PP  GG+ G+  G+PG  G V   G    RG     G PG
Sbjct: 668 PGPTGFQGHPGPPGPPGEGGKPGD-QGVPGGPGAVGPLGPRGERGNPGERGEPG 720



 Score = 32.3 bits (72), Expect = 0.57
 Identities = 22/55 (40%), Positives = 24/55 (43%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           DPG M   G      PP + G DGE  G  G  G V  AG    RG   + G PG
Sbjct: 244 DPGPMGPIGSRGPEGPPGKPGEDGE-PGRNGNPGEVGFAGSPGARGFPGAPGLPG 297



 Score = 32.0 bits (71), Expect = 0.74
 Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRG--GRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           DPG     G+    VP  RG  G+DG++   G PG  GL    GE+   G     GHPG
Sbjct: 622 DPGKPGEAGNPG--VPGQRGAPGKDGKVGPYGPPGPPGLRGERGEQGPPGPTGFQGHPG 678



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 20/54 (37%), Positives = 22/54 (40%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
            PG     GD   R P    GR G+  GLPG  G     G+   RG     GH G
Sbjct: 1091 PGDAGQRGDPGSRGPIGHLGRAGKR-GLPGPQGPRGDKGDHGDRGDRGQKGHRG 1143

---

>WDR17_HUMAN (Q8IZU2) WD-repeat protein 17|
          Length = 1322

 Score = 35.4 bits (80), Expect = 0.067
 Identities = 32/125 (25%), Positives = 46/125 (36%), Gaps = 1/125 (0%)
 Frame = +1

Query: 10  VDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSL 189
           V   H   ++   W P  +     +L +GS D TVR W     A  +    GH   V  L
Sbjct: 561 VFSGHTAKVFHVKWSPLRE----GILCSGSDDGTVRIWDYTQDACINI-LNGHTAPVRGL 615

Query: 190 XXXXXX-XXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXX 366
                        S D  I+V+D   G  V T+    ++V+G+  HP             
Sbjct: 616 MWNTEIPYLLISGSWDYTIKVWDTREGTCVDTVYDHGADVYGLTCHPSRPFTMASCSRDS 675

Query: 367 XVKLW 381
            V+LW
Sbjct: 676 TVRLW 680

---

>SCONB_EMENI (Q00659) Sulfur metabolite repression control protein|
          Length = 678

 Score = 35.0 bits (79), Expect = 0.088
 Identities = 20/80 (25%), Positives = 37/80 (46%)
 Frame = +1

Query: 67  HRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIR 246
           H   ++L +GS+D+TV+ W  +D +  S    GH   V ++            S D  +R
Sbjct: 436 HFDASILASGSVDKTVKIWNFEDKSTFS--LRGHTDWVNAVRVDTSSRTVFSASDDCTVR 493

Query: 247 VFDVDSGASVTTLDAAPSEV 306
           ++D+D+   + T      +V
Sbjct: 494 LWDLDTKTCIRTFHGHVGQV 513

---

>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor|
          Length = 1804

 Score = 35.0 bits (79), Expect = 0.088
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 34
            PG    +G   E+ P    GRDG    VGLPG  G     GE+  +G +   G  G + D
Sbjct: 1081 PGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGD 1140

Query: 33   R 31
            +
Sbjct: 1141 K 1141



 Score = 33.1 bits (74), Expect = 0.33
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           +PG     G      PP   G  G+  + GLPGADG     G+E + G   + G PG
Sbjct: 693 NPGSQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPG 749



 Score = 32.3 bits (72), Expect = 0.57
 Identities = 20/55 (36%), Positives = 24/55 (43%)
 Frame = -1

Query: 210  DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
            DPG     G   E  PP   G+ G     PGA G   R GE+  +G   + G PG
Sbjct: 1338 DPGQPGPPGPSGEAGPPGPPGKRGP----PGASGSEGRQGEKGAKGEAGAEGPPG 1388



 Score = 32.0 bits (71), Expect = 0.74
 Identities = 22/66 (33%), Positives = 27/66 (40%)
 Frame = -1

Query: 210  DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 31
            +PG   S+GD  E  PP   G  G  VG PG  G     G   ++G     G  G R   
Sbjct: 1131 EPGQKGSKGDKGENGPPGPPGLQGP-VGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFP 1189

Query: 30   VLVSPV 13
             L  P+
Sbjct: 1190 GLPGPI 1195



 Score = 29.3 bits (64), Expect = 4.8
 Identities = 22/73 (30%), Positives = 26/73 (35%), Gaps = 8/73 (10%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDGEIV--------GLPGADGLVDRAGEEQRRGAVVSSGH 52
            PG    EG   +  P    G+DG           GLPGA G     G E  +G     G 
Sbjct: 997  PGAAGKEGAKGDPGPQGISGKDGPAGIRGFPGERGLPGAQGAPGLKGGEGPQGPQGPVGS 1056

Query: 51   PGGRPDRVLVSPV 13
            PG R       P+
Sbjct: 1057 PGERGSAGAAGPI 1069

---

>COBA1_BOVIN (Q28083) Collagen alpha-1(XI) chain precursor (Fragment)|
          Length = 911

 Score = 35.0 bits (79), Expect = 0.088
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 34
            PG    +G   E+ P    GRDG    VGLPG  G     GE+  +G +   G  G + D
Sbjct: 850  PGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGD 909

Query: 33   R 31
            +
Sbjct: 910  K 910



 Score = 33.5 bits (75), Expect = 0.26
 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           +PG     G      PP   G  G+  + GLPGADG     G+E + G   S G PG
Sbjct: 462 NPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGSLGPPG 518



 Score = 29.3 bits (64), Expect = 4.8
 Identities = 22/73 (30%), Positives = 26/73 (35%), Gaps = 8/73 (10%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIV--------GLPGADGLVDRAGEEQRRGAVVSSGH 52
           PG    EG   +  P    G+DG           GLPGA G     G E  +G     G 
Sbjct: 766 PGAAGKEGAKGDPGPQGVSGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGS 825

Query: 51  PGGRPDRVLVSPV 13
           PG R       P+
Sbjct: 826 PGERGSAGTAGPI 838

---

>PRP46_CANGA (Q6FJZ9) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing|
           protein 46)
          Length = 427

 Score = 35.0 bits (79), Expect = 0.088
 Identities = 25/109 (22%), Positives = 40/109 (36%)
 Frame = +1

Query: 91  TGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGA 270
           TGS D+T++ W              H + V  L           VS D  ++ +D++   
Sbjct: 133 TGSNDKTIKIWNLAS-GKLKVTLKAHDMTVRDLAISNRHPYMFSVSEDKTVKCWDLEKNT 191

Query: 271 SVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWXPIASLP 417
           ++       S V  V  HP  +           VK+WD     P+ +LP
Sbjct: 192 AIRNYHGHLSGVHTVDIHPT-VDVVVTAGRDSVVKVWDIRTRLPVMTLP 239

---

>CO4A4_HUMAN (P53420) Collagen alpha-4(IV) chain precursor|
          Length = 1690

 Score = 35.0 bits (79), Expect = 0.088
 Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
 Frame = -1

Query: 207 PGGMRSE-GDHSERVPPCRGGRDGE-----IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           P G+  E G   +R PP   G  G+     + G PG DG+    G    RG    SGH G
Sbjct: 84  PIGLSGEKGMRGDRGPPGAAGDKGDKGPTGVPGFPGLDGIPGHPGPPGPRGKPGMSGHNG 143

Query: 45  GRPD 34
            R D
Sbjct: 144 SRGD 147



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 34
           PG     GD      P   G  GE+  VG PG  GL+   G+   R      GHPG  P 
Sbjct: 304 PGFPGPRGDPGSYGSPGFPGLKGELGLVGDPGLFGLIGPKGDPGNR------GHPG--PP 355

Query: 33  RVLVSP 16
            VLV+P
Sbjct: 356 GVLVTP 361



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 20/56 (35%), Positives = 23/56 (41%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
           PG    +GD      P   G DG I G PG  G   + G     G+    G PGGR
Sbjct: 100 PGAAGDKGDKGPTGVPGFPGLDG-IPGHPGPPGPRGKPGMSGHNGSRGDPGFPGGR 154



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = -1

Query: 204  GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGG 43
            G M   G      P C+G  +  + G  G DG+    G   R+G     G+PGG
Sbjct: 1392 GAMGLPGMRGPPGPGCKG--EPGLDGRRGVDGVPGSPGPPGRKGDTGEDGYPGG 1443

---

>CO5A1_RAT (Q9JI03) Collagen alpha-1(V) chain precursor|
          Length = 1840

 Score = 35.0 bits (79), Expect = 0.088
 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 34
            PG    +G   E  P    GRDG    VGLPG  G V   GE+  +G +   G  G + D
Sbjct: 1115 PGPAGEKGVPGEEGPQGPAGRDGLQGPVGLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGD 1174

Query: 33   R 31
            +
Sbjct: 1175 K 1175



 Score = 31.6 bits (70), Expect = 0.97
 Identities = 19/57 (33%), Positives = 24/57 (42%)
 Frame = -1

Query: 210  DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
            +PG   S+GD  E+ PP   G  G   G PG  G     G   ++G     G  G R
Sbjct: 1165 EPGQKGSKGDKGEQGPPGPTGPQGP-TGQPGPSGADGEPGPRGQQGLFGQKGDEGSR 1220



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 21/54 (38%), Positives = 22/54 (40%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
            PG     GD  +  PP   G  G   G PGADG     G     GAV   G PG
Sbjct: 1238 PGEKGETGDVGQMGPPGPPGPRGPS-GAPGADGPQGPPGGIGNPGAVGEKGEPG 1290



 Score = 28.9 bits (63), Expect = 6.3
 Identities = 27/77 (35%), Positives = 32/77 (41%), Gaps = 9/77 (11%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRP- 37
            PG +  +G   E  P    G  G   G PG  GL   AG+E  +G    +G PG  G P 
Sbjct: 998  PGVVGPQGPTGETGPMGERGHPGP-PGPPGEQGLPGAAGKEGTKGDPGPAGLPGKDGPPG 1056

Query: 36   ------DRVLVSPVHRL 4
                  DR L  PV  L
Sbjct: 1057 LRGFPGDRGLPGPVGAL 1073



 Score = 28.9 bits (63), Expect = 6.3
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           +PG     G      PP   G  G+  + G+PGADG     G+E   G     G PG
Sbjct: 727 NPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPG 783



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 17/72 (23%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGE--------IVGLPGA---------DGLVDRAGEEQ 82
           +PG M  +G    + PP   G+ G           G+PG          DGL    GE+ 
Sbjct: 586 EPGDMGPQGPRGVQGPPGPTGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKG 645

Query: 81  RRGAVVSSGHPG 46
            RG    SG PG
Sbjct: 646 HRGDPGPSGPPG 657

---

>COPB2_CAEEL (Q20168) Probable coatomer subunit beta' (Beta'-coat protein)|
           (Beta'-COP)
          Length = 1000

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
 Frame = +1

Query: 91  TGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVS-IDSH-IRVFDVDS 264
           T S+D+TV+ WQ     V +    GH  GV  +           +S  D H ++++D  +
Sbjct: 160 TASLDKTVKVWQFGS-NVPNFTLEGHEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQN 218

Query: 265 GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 381
              V TLD     V  V FHP+ +           V+LW
Sbjct: 219 KTCVQTLDGHAQNVSSVCFHPE-LPLIITGSEDSTVRLW 256

---

>HAT2_ASPFU (Q4WEI5) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 436

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 21/61 (34%), Positives = 30/61 (49%)
 Frame = +1

Query: 7   SVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVS 186
           S +G H D+I A A+ PAA+     +L TGS D+T+  W   +L         H   V S
Sbjct: 280 STEGQHRDAINAIAFNPAAE----TVLATGSADKTIGLWDLRNLKTKLHSLESHTDSVTS 335

Query: 187 L 189
           +
Sbjct: 336 I 336

---

>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor|
          Length = 1745

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = -1

Query: 204  GGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 31
            G    +G   ER PP   G+DG    +G  G  G    +GEE  +G V + GH G + D+
Sbjct: 1034 GPAGKKGSRGERGPPGPTGKDGIPGPLGPLGPPGAAGPSGEEGDKGDVGAPGHKGSKGDK 1093



 Score = 31.6 bits (70), Expect = 0.97
 Identities = 24/66 (36%), Positives = 28/66 (42%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRV 28
           PG   + G   E  PP + G  G   GLPG  GL+   GE+   G     G PG   D  
Sbjct: 625 PGAKGNVGPPGEPGPPGQQGNHGS-QGLPGPQGLIGTPGEKGPPGNPGIPGLPGS--DGP 681

Query: 27  LVSPVH 10
           L  P H
Sbjct: 682 LGHPGH 687



 Score = 31.6 bits (70), Expect = 0.97
 Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRP 37
           PG     GD      P   G DGE  G  G  G   +AGE   RG +   G PG  GRP
Sbjct: 559 PGEKGQRGDFGHVGQPGPPGEDGER-GAEGPPGPTGQAGEPGPRGLLGPRGSPGPTGRP 616



 Score = 31.2 bits (69), Expect = 1.3
 Identities = 20/54 (37%), Positives = 24/54 (44%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           PG     G   E+ PP   G    I GLPG+DG +   G E   G   + G PG
Sbjct: 652 PGPQGLIGTPGEKGPPGNPG----IPGLPGSDGPLGHPGHEGPTGEKGAQGPPG 701



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 8/65 (12%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDGE--------IVGLPGADGLVDRAGEEQRRGAVVSSGH 52
            PG   ++G    R PP   G+ G+        ++G PG  GL    GE+   G V S G 
Sbjct: 1111 PGPPGADGAQGRRGPPGLFGQKGDDGVRGFVGVIGPPGLQGLPGPPGEKGEVGDVGSMG- 1169

Query: 51   PGGRP 37
            P G P
Sbjct: 1170 PHGAP 1174



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = -1

Query: 165  PPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
            PP   G  G+  GLPG  G     G+    G + S GHPG
Sbjct: 1413 PPGEAGEKGD-QGLPGVQGPPGPKGDPGPPGPIGSLGHPG 1451



 Score = 29.3 bits (64), Expect = 4.8
 Identities = 20/55 (36%), Positives = 22/55 (40%)
 Frame = -1

Query: 210  DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
            D G M   G    R P    G +G   GLPG  G     GE+  RG     G PG
Sbjct: 1164 DVGSMGPHGAPGPRGPQGPTGSEGT-PGLPGGVGQPGAVGEKGERGDAGDPGPPG 1217



 Score = 28.9 bits (63), Expect = 6.3
 Identities = 22/61 (36%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRPD 34
            PG     GD     PP   G  G   G PG  G     G E R G   + G PG  G P 
Sbjct: 1282 PGEKGDPGDVGGPGPPGASGEPGA-PGPPGKRGPSGHMGREGREGEKGAKGEPGPDGPPG 1340

Query: 33   R 31
            R
Sbjct: 1341 R 1341

---

>ERCC8_MOUSE (Q8CFD5) DNA excision repair protein ERCC-8 (Cockayne syndrome WD|
           repeat protein CSA homolog)
          Length = 397

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 30/144 (20%), Positives = 48/144 (33%), Gaps = 14/144 (9%)
 Frame = +1

Query: 4   KSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVA------------ 147
           +S    H+ S+    W P      T +  + S D+T++ W  + L  A            
Sbjct: 92  RSHPDVHKYSVETVQWYP----HDTGMFTSSSFDKTLKVWDTNTLQAADVFNFEETVYSH 147

Query: 148 --SPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQF 321
             SP A  H L  V                   +++ D+ SG+    L     E+  V +
Sbjct: 148 HMSPAATKHCLVAVGTRG-------------PKVQLCDLKSGSCSHILQGHRQEILAVSW 194

Query: 322 HPKGIXXXXXXXXXXXVKLWDTEK 393
            P+             VKLWD  +
Sbjct: 195 SPRHDYILATASADSRVKLWDVRR 218

---

>PRP46_CRYNE (Q5KDR4) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing|
           protein 46)
          Length = 473

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 25/105 (23%), Positives = 38/105 (36%)
 Frame = +1

Query: 67  HRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIR 246
           H    +L+TG  D +VR W     A      G H   V  +            S+DS +R
Sbjct: 275 HPTLDVLVTGGRDASVRVWDMRTRANIFTLTG-HTSTVGDVKTQDSDPQIISGSMDSTVR 333

Query: 247 VFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 381
           ++D+ +G  + TL      V  +  HP              +K W
Sbjct: 334 LWDLAAGKCMNTLTHHKKSVRALAIHPTEYSFASASSGGNNIKKW 378

---

>PRP46_ASPFU (Q4WT34) Pre-mRNA-splicing factor prp46 (Pre-mRNA-processing|
           protein 46)
          Length = 453

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
 Frame = +1

Query: 1   FKSVDG-AHEDSIWAAAWVPAADHRPTAL-LLTGSIDETVRAWQPDDLA 141
           F+S+D  A   S+ A A + +A    T L L+TG  D+T++ W+PDD A
Sbjct: 387 FQSIDTMAQPGSLDAEAGIMSATFDRTGLRLITGEADKTIKVWKPDDEA 435



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 2/105 (1%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASP--PAGGHALGVVSLXX 195
           H   ++  A  P  D     LL+TG  D   R W   D+   S      GH   V  L  
Sbjct: 227 HLSGVYTLALHPRLD-----LLVTGGRDGVARVW---DMRTRSNIHVLSGHKGTVADLKC 278

Query: 196 XXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPK 330
                     S+D+ +R++D+ +G ++  L      V  +  HP+
Sbjct: 279 QEADPQIITGSLDATVRLWDLAAGKTMGVLTHHKKGVRNLAIHPR 323

---

>PFS2_YEAST (P42841) Protein PFS2|
          Length = 465

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 26/138 (18%), Positives = 55/138 (39%)
 Frame = +1

Query: 1   FKSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGV 180
           F+++  AH+ ++    +   +D      +++G  D  ++ WQP+   V    A  H   +
Sbjct: 127 FETLMQAHDSAVTTMKYSHDSDW-----MISGDADGMIKIWQPNFSMVKEIDA-AHTESI 180

Query: 181 VSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXX 360
             +            S D+ +++++  +G     L     +V    +HP+ +        
Sbjct: 181 RDMAFSSNDSKFVTCSDDNILKIWNFSNGKQERVLSGHHWDVKSCDWHPE-MGLIASASK 239

Query: 361 XXXVKLWDTEKWXPIASL 414
              VKLWD      I+S+
Sbjct: 240 DNLVKLWDPRSGNCISSI 257

---

>COGA1_HUMAN (Q07092) Collagen alpha-1(XVI) chain precursor|
          Length = 1603

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 22/54 (40%), Positives = 25/54 (46%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
            P    + GD+SE  P C G       GLPG  GL  + GEE   G   S G PG
Sbjct: 999  PRAEEARGDNSEGDPGCVGSP-----GLPGPPGLPGQRGEEGPPGMRGSPGPPG 1047



 Score = 28.9 bits (63), Expect = 6.3
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -1

Query: 165  PPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 31
            PP + G  G   G PG+ GL  + G E R+G     G PG + ++
Sbjct: 1476 PPGKDGAPGR-PGAPGSPGLPGQIGREGRQGLPGVRGLPGTKGEK 1519

---

>PRP46_SCHPO (O13615) Pre-mRNA-splicing factor prp46 (Pre-mRNA-processing|
           protein 5) (Complexed with cdc5 protein 1)
          Length = 473

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQP---DDLAVASPPAGGHALGVVSLX 192
           H   ++A    P  D     +L+T   D   R W      ++ V S    GH   V SL 
Sbjct: 246 HLSGVYALKLHPTLD-----VLVTAGRDAVARVWDMRTRQNVHVLS----GHKSTVASLA 296

Query: 193 XXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHP 327
                      S+DS IR++D+ +G ++TTL      V  +  HP
Sbjct: 297 VQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLHP 341

---

>WDR3_HUMAN (Q9UNX4) WD-repeat protein 3|
          Length = 943

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 28/111 (25%), Positives = 45/111 (40%)
 Frame = +1

Query: 82  LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 261
           LL    +D TV+ +  D L        GH L V+ +            S D +++++ +D
Sbjct: 563 LLAVSLLDCTVKIFYVDTLKFFLS-LYGHKLPVICMDISHDGALIATGSADRNVKIWGLD 621

Query: 262 SGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWXPIASL 414
            G    +L A    V  +QF PK             +K WD +K+  I +L
Sbjct: 622 FGDCHKSLFAHDDSVMYLQFVPKS-HLFFTAGKDHKIKQWDADKFEHIQTL 671



 Score = 32.7 bits (73), Expect = 0.44
 Identities = 24/102 (23%), Positives = 36/102 (35%)
 Frame = +1

Query: 79  ALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDV 258
           AL+ TGS D  V+ W  D           H   V+ L              D  I+ +D 
Sbjct: 604 ALIATGSADRNVKIWGLD-FGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIKQWDA 662

Query: 259 DSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 384
           D    + TL+    E+W +   P G            ++LW+
Sbjct: 663 DKFEHIQTLEGHHQEIWCLAVSPSG-DYVVSSSHDKSLRLWE 703

---

>HAT2_ASPOR (Q2UA71) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 436

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 28/97 (28%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
 Frame = +1

Query: 7   SVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVS 186
           S +G H D+I A A+ PAA+     +L TGS D+++  W   +L         H   V S
Sbjct: 280 SAEGQHRDAINAIAFNPAAE----TVLATGSADKSIGLWDLRNLKTKLHTLECHTDSVTS 335

Query: 187 LX-XXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAA 294
           L             S D  I  +D+       T D A
Sbjct: 336 LSWHPFEESVLASASYDRKIMFWDLSRSGEEQTPDDA 372

---

>FBXW7_HUMAN (Q969H0) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein|
           7) (F-box protein FBX30) (hCdc4) (Archipelago homolog)
           (hAgo) (SEL-10)
          Length = 707

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 28/113 (24%), Positives = 46/113 (40%)
 Frame = +1

Query: 85  LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 264
           +++G+ D  V+ W P+          GH   V SL            S+D+ IRV+DV++
Sbjct: 514 VVSGAYDFMVKVWDPET-ETCLHTLQGHTNRVYSLQFDGIHVVSG--SLDTSIRVWDVET 570

Query: 265 GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWXPIASLPVP 423
           G  + TL    S   G++                 VK+WD +    + +L  P
Sbjct: 571 GNCIHTLTGHQSLTSGMELKDN---ILVSGNADSTVKIWDIKTGQCLQTLQGP 620

---

>SFTPA_RABIT (P12842) Pulmonary surfactant-associated protein A precursor (SP-A)|
           (PSP-A) (PSAP)
          Length = 247

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 21/56 (37%), Positives = 25/56 (44%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
           PG    +G   +  PP   G  G + GLPG DGL+   G    RG     G PG R
Sbjct: 41  PGRDGRDGVKGDPGPPGPMGPPGGMPGLPGRDGLIGAPGVPGERG---DKGEPGER 93

---

>FBXW7_MOUSE (Q8VBV4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein|
           7) (F-box protein FBW7) (F-box protein Fbxw6)
           (F-box-WD40 repeat protein 6) (SEL-10)
          Length = 629

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 28/113 (24%), Positives = 46/113 (40%)
 Frame = +1

Query: 85  LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 264
           +++G+ D  V+ W P+          GH   V SL            S+D+ IRV+DV++
Sbjct: 436 VVSGAYDFMVKVWDPET-ETCLHTLQGHTNRVYSLQFDGIHVVSG--SLDTSIRVWDVET 492

Query: 265 GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWXPIASLPVP 423
           G  + TL    S   G++                 VK+WD +    + +L  P
Sbjct: 493 GNCIHTLTGHQSLTSGMELKDN---ILVSGNADSTVKIWDIKTGQCLQTLQGP 542

---

>TUP12_SCHPO (Q9UUG8) Transcriptional repressor tup12|
          Length = 586

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 11/115 (9%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPA-----------GGH 168
           HE+S+++ A+ P   +     L++GS+D T++ W+   ++  +P              GH
Sbjct: 457 HEESVYSVAFSPDGKY-----LVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGH 511

Query: 169 ALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKG 333
              ++S+            S D  I+ +  DS  S  TL    + V  V   P G
Sbjct: 512 KDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNG 566

---

>TBL1R_MOUSE (Q8BHJ5) F-box-like/WD-repeat protein TBL1XR1 (Transducin beta-like|
           1X-related protein 1) (Nuclear receptor
           corepressor/HDAC3 complex subunit TBLR1) (TBL1-related
           protein 1)
          Length = 514

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 13/117 (11%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPP---------AGGHAL 174
           HE  ++  AW P +D     LL +GS D T R W   + + + P           GG  +
Sbjct: 168 HESEVFICAWNPVSD-----LLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDV 222

Query: 175 ----GVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKG 333
                V SL            S D   R++  D G   +TL      ++ ++++ KG
Sbjct: 223 PSNKDVTSLDWNSEGTLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFALKWNKKG 278



 Score = 33.1 bits (74), Expect = 0.33
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +1

Query: 226 SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTE 390
           S DS +R++DVD G  + TL      V+ V F P G            V +W+T+
Sbjct: 419 SFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDG-RYLASGSFDKCVHIWNTQ 472

---

>CI112_MOUSE (Q9CYU6) WD repeat-containing protein C9orf112 homolog|
          Length = 477

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
 Frame = +1

Query: 46  AWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXV 225
           AW+ A ++  T L+ +G  D  +R W    L      +  H +GV S+            
Sbjct: 197 AWIAAFNYWQTELVYSGGDDCLLRGWDTRMLGTPVFTSKRHCMGVCSIQSSPHQEHILAT 256

Query: 226 -SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHP 327
            S D H+ ++D  +             VW +++HP
Sbjct: 257 GSYDEHVLLWDTRNIRQPLADVPVQGGVWRLKWHP 291

---

>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)|
            (LC collagen)
          Length = 2944

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 34
            PG +   G+  ER PP   G  G   + G PGA G     G   R+G     G PG   D
Sbjct: 1485 PGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQG---EKGEPGRPGD 1541

Query: 33   RVLVSP 16
              +V P
Sbjct: 1542 PAVVGP 1547



 Score = 31.6 bits (70), Expect = 0.97
 Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
 Frame = -1

Query: 210  DPGGMRSEGDHSERVPPCR---GGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSG 55
            D G    +GD     PP      GRDGE+      G PG  GL  +AGE   RGA    G
Sbjct: 1608 DSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRG 1667

Query: 54   HPGGRPDR 31
              G + D+
Sbjct: 1668 PVGEKGDQ 1675



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 25/61 (40%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = -1

Query: 210  DPGGMRSEG-DHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 34
            DPG     G    ER PP   G  GE  G PG  GL  RA      G V  +G PG R +
Sbjct: 2010 DPGPQGPPGLALGERGPPGPSGLAGE-PGKPGIPGLPGRA------GGVGEAGRPGERGE 2062

Query: 33   R 31
            R
Sbjct: 2063 R 2063



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRG--GRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
            P G++  G+  E  PP RG  G  G +   G PG  GLV   G     G V  +G PG
Sbjct: 2202 PSGLK--GEPGETGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPG 2257



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 153  GGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
            GG  G++VG PGA G     G    +G    +G PG
Sbjct: 2316 GGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPG 2351

---

>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 33.5 bits (75), Expect = 0.26
 Identities = 21/60 (35%), Positives = 27/60 (45%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 31
           +PGG    G      PP + G DGE  G PG  G     G +  RG   ++G PG +  R
Sbjct: 199 EPGGSGPMGPRGPPGPPGKNGDDGE-AGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHR 257

---

>PRP4_ARATH (O22212) U4/U6 small nuclear ribonucleoprotein PRP4-like protein|
          Length = 554

 Score = 33.5 bits (75), Expect = 0.26
 Identities = 27/104 (25%), Positives = 41/104 (39%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 201
           H D +   A+ P+  +     L T S D+T R W  +  A      G H+  V  +    
Sbjct: 338 HLDRLARVAFHPSGKY-----LGTTSYDKTWRLWDINTGAELLLQEG-HSRSVYGIAFQQ 391

Query: 202 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKG 333
                    +DS  RV+D+ +G S+         V+ V F P G
Sbjct: 392 DGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNG 435

---

>ERCC8_BOVIN (Q5BIM8) DNA excision repair protein ERCC-8|
          Length = 397

 Score = 33.5 bits (75), Expect = 0.26
 Identities = 29/144 (20%), Positives = 49/144 (34%), Gaps = 14/144 (9%)
 Frame = +1

Query: 4   KSVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVA------------ 147
           +S    H+ S+    W P      T +  + S D+T++ W  + L +A            
Sbjct: 92  RSHPDVHKYSVETVQWYP----HDTGMFTSSSFDKTLKVWDTNTLQIADVFNFEETVYSH 147

Query: 148 --SPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQF 321
             SP A  H L  V              +    +++ D+ SG+    L     E+  V +
Sbjct: 148 HMSPVATKHCLVAVG-------------TRGPKVQLCDLKSGSCSHILQGHRQEILAVSW 194

Query: 322 HPKGIXXXXXXXXXXXVKLWDTEK 393
            P+              KLWD  +
Sbjct: 195 SPRYEYILATASADSRAKLWDVRR 218

---

>TB1RB_XENLA (Q6GPC6) F-box-like/WD-repeat-containing protein TBL1XR1-B|
           (Transducin beta-like 1X-related homolog 1-B) (Nuclear
           receptor corepressor/HDAC3 complex subunit TBLR1-B)
           (TBL1-related protein 1-B)
          Length = 522

 Score = 33.5 bits (75), Expect = 0.26
 Identities = 31/131 (23%), Positives = 47/131 (35%), Gaps = 8/131 (6%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVVSLXXX 198
           H + + A  W P  +     LL + S D T++ W    D  V    A    +  +     
Sbjct: 356 HTNEVNAIKWDPTGN-----LLASCSDDMTLKIWSMKHDTCVHDLQAHNKEIYTIKWSPT 410

Query: 199 X-------XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXX 357
                           S DS +R++DVD G  + TL      V+ V F P G        
Sbjct: 411 GPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDG-RYLASGS 469

Query: 358 XXXXVKLWDTE 390
               V +W+T+
Sbjct: 470 FDKCVHIWNTQ 480



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 13/117 (11%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPP---------AGGHAL 174
           HE  ++  AW P +D     LL +GS D T R W   + + +             GG  +
Sbjct: 176 HESEVFICAWNPVSD-----LLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDV 230

Query: 175 ----GVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKG 333
                V SL            S D   R++  D G   +TL      ++ ++++ KG
Sbjct: 231 PSNKDVTSLDWNSEGTLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFALKWNKKG 286

---

>TB1RA_XENLA (Q7SZM9) F-box-like/WD-repeat-containing protein TBL1XR1-A|
           (Transducin beta-like 1X-related protein 1-A) (Nuclear
           receptor corepressor/HDAC3 complex subunit TBLR1-A)
           (TBL1-related protein 1-A) (xTBLR1)
          Length = 519

 Score = 33.5 bits (75), Expect = 0.26
 Identities = 31/131 (23%), Positives = 47/131 (35%), Gaps = 8/131 (6%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVVSLXXX 198
           H + + A  W P  +     LL + S D T++ W    D  V    A    +  +     
Sbjct: 353 HTNEVNAIKWDPTGN-----LLASCSDDMTLKIWSMKHDTCVHDLQAHNKEIYTIKWSPT 407

Query: 199 X-------XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXX 357
                           S DS +R++DVD G  + TL      V+ V F P G        
Sbjct: 408 GPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDG-RYLASGS 466

Query: 358 XXXXVKLWDTE 390
               V +W+T+
Sbjct: 467 FDKCVHIWNTQ 477



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 13/117 (11%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPP---------AGGHAL 174
           HE  ++  AW P +D     LL +GS D T R W   + + +             GG  +
Sbjct: 173 HESEVFICAWNPVSD-----LLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDV 227

Query: 175 ----GVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKG 333
                V SL            S D   R++  D G   +TL      ++ ++++ KG
Sbjct: 228 PSNKDVTSLDWNSEGTLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFALKWNKKG 283

---

>YCW2_YEAST (P25382) Hypothetical WD-repeat protein YCR072C|
          Length = 515

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 7/128 (5%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLX--- 192
           H + +   +W P  +     ++ TGS+D T+R W P           GH+  + SL    
Sbjct: 185 HYNWVLCVSWSPDGE-----VIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEP 239

Query: 193 ----XXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXX 360
                          S D  I+++D  S     T+    + V  V++  +G+        
Sbjct: 240 IHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQGL--LYSGSH 297

Query: 361 XXXVKLWD 384
              V++WD
Sbjct: 298 DRTVRVWD 305

---

>POP2_SCHPO (O14170) WD-repeat protein pop2 (Proteolysis factor sud1)|
          Length = 703

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 24/112 (21%), Positives = 45/112 (40%)
 Frame = +1

Query: 82  LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 261
           +L++GS D ++R W+            GH+L + S+            S+D  IRV+D+ 
Sbjct: 519 ILVSGSYDSSIRIWRVST-GECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLS 577

Query: 262 SGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWXPIASLP 417
           +G     L+   + V  +      +           +++WD     P+  LP
Sbjct: 578 TGTCKYVLEGHDAFVTLLNVFQNRL---ISGSADSTIRIWDLNTGKPLMVLP 626

---

>FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein 7)|
            (Protein archipelago)
          Length = 1326

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 27/103 (26%), Positives = 43/103 (41%)
 Frame = +1

Query: 85   LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 264
            +++GS D T++ W   +         GH  GV S             S D  ++V+D+DS
Sbjct: 1008 IVSGSDDNTLKVWSAVN-GKCLRTLVGHTGGVWSSQMSGNIIISG--STDRTLKVWDMDS 1064

Query: 265  GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 393
            GA V TL    S V  +  H   +           +++WD E+
Sbjct: 1065 GACVHTLQGHTSTVRCMHLHGSKV---VSGSRDATLRVWDIEQ 1104



 Score = 31.6 bits (70), Expect = 0.97
 Identities = 27/101 (26%), Positives = 41/101 (40%)
 Frame = +1

Query: 82   LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 261
            L+++G+ D  V+ W P+          GH   V SL            S+D+ IRV+DV+
Sbjct: 1127 LIVSGAYDYMVKIWHPERQECLHT-LQGHTNRVYSLQFDGLHVVSG--SLDTSIRVWDVE 1183

Query: 262  SGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 384
            +G    TL    S   G++                 VK+WD
Sbjct: 1184 TGNCKHTLMGHQSLTSGMELRQN---ILVSGNADSTVKVWD 1221

---

>TBL1R_HUMAN (Q9BZK7) F-box-like/WD-repeat protein TBL1XR1 (Transducin beta-like|
           1X-related protein 1) (Nuclear receptor
           corepressor/HDAC3 complex subunit TBLR1) (TBL1-related
           protein 1)
          Length = 514

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = +1

Query: 226 SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTE 390
           S DS +R++DVD G  + TL      V+ V F P G            V +W+T+
Sbjct: 419 SFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDG-RYLASGSFDKCVHIWNTQ 472



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 13/117 (11%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPP---------AGGHAL 174
           HE  ++  AW P +D     LL +GS D T R W   + + +             GG  +
Sbjct: 168 HESEVFICAWNPVSD-----LLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDV 222

Query: 175 ----GVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKG 333
                V SL            S D   R++  D G   +TL      ++ ++++ KG
Sbjct: 223 PSNKDVTSLDWNSEGTLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFALKWNKKG 278

---

>Y1491_SYNY3 (P74598) Hypothetical WD-repeat protein sll1491|
          Length = 348

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 26/104 (25%), Positives = 40/104 (38%)
 Frame = +1

Query: 73  PTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVF 252
           P    L G++   V+AW   D A       G +L + ++            + +  I +F
Sbjct: 241 PDGRKLVGAVRNFVKAWNLAD-AKELFSVRGPSLEINTIAVSPNNRWVATANKEGTIMIF 299

Query: 253 DVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 384
           D+ +G  VTTL      V  + F P G            VK+WD
Sbjct: 300 DLANGKQVTTLRGHQGWVLSLAFSPDG-NTLYSGAEDKTVKIWD 342

---

>YAGE_SCHPO (Q9UTN4) Hypothetical WD-repeat protein C12G12.14c in chromosome I|
          Length = 509

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
 Frame = +1

Query: 67  HRPTALLLTGSIDETVRAWQP-DDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHI 243
           H    LL +GS D  V+ W P     +A+     + +   S            VS DS  
Sbjct: 215 HPSKGLLASGSKDNLVKFWDPRTGTCIATLHGHKNTIMQASFQKNFGSNYLATVSRDSTC 274

Query: 244 RVFDVDSGASVTTLDAAPSEVWGVQFHP 327
           RVFD+ +   V  L     +V  V +HP
Sbjct: 275 RVFDLRAMKDVRVLRGHEKDVNCVTWHP 302



 Score = 28.9 bits (63), Expect = 6.3
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = +1

Query: 19  AHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW---QPDD 135
           AH+  IW+  + P        LL TGS D+T R W   +PDD
Sbjct: 358 AHDLGIWSMQYHPLGH-----LLCTGSNDKTTRFWSRSRPDD 394

---

>TBLX_MOUSE (Q9QXE7) F-box-like/WD-repeat protein TBL1X (Transducin beta-like|
           1X protein)
          Length = 527

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 30/131 (22%), Positives = 47/131 (35%), Gaps = 8/131 (6%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVVSLXXX 198
           H + + A  W P+       LL + S D T++ W    D  V    A    +  +     
Sbjct: 361 HTNEVNAIKWDPSG-----MLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPT 415

Query: 199 XXXXXX-------XXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXX 357
                           S DS +R++DV+ G  + TL      V+ V F P G        
Sbjct: 416 GPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDG-KYLASGS 474

Query: 358 XXXXVKLWDTE 390
               V +W+T+
Sbjct: 475 FDKCVHIWNTQ 485



 Score = 32.7 bits (73), Expect = 0.44
 Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 13/117 (11%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPP---------AGGHAL 174
           HE  ++  AW P +D     LL +GS D T R W  ++ +               GGH +
Sbjct: 181 HESEVFICAWNPVSD-----LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDV 235

Query: 175 ----GVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKG 333
                V SL            S D   R++  D G   +TL      ++ ++++ KG
Sbjct: 236 PSNKDVTSLDWNSDGTLLATGSYDGFARIWTED-GNLASTLGQHKGPIFALKWNKKG 291

---

>KTNB1_MOUSE (Q8BG40) Katanin p80 WD40-containing subunit B1 (Katanin p80|
           subunit B1) (p80 katanin)
          Length = 658

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 3/107 (2%)
 Frame = +1

Query: 82  LLLTGSIDETVRAW---QPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVF 252
           LL TG  D  V  W   +P+ +   +    GH   V S+            S    IRV+
Sbjct: 35  LLATGGDDCRVNLWSINKPNCIMSLT----GHTSPVESVRLNTPEELIVAGSQSGSIRVW 90

Query: 253 DVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 393
           D+++   + TL    + +  + FHP G            +KLWD  +
Sbjct: 91  DLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRR 136



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 28/122 (22%), Positives = 44/122 (36%), Gaps = 10/122 (8%)
 Frame = +1

Query: 85  LLTGSIDETVRAWQPDDLAVASPPAG--GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDV 258
           L + + D TV+ W   DL      +   GH   V  +            S D  IR +D+
Sbjct: 162 LASAADDHTVKLW---DLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218

Query: 259 DSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK--------WXPIASL 414
           +    V+ ++  P  V  V F+P G            V  W+ E+        W  +A L
Sbjct: 219 EKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADL 278

Query: 415 PV 420
            +
Sbjct: 279 AI 280

---

>TAF5L_MOUSE (Q91WQ5) TAF5-like RNA polymerase II p300/CBP-associated|
           factor-associated factor 65 kDa subunit 5L
           (PCAF-associated factor 65 beta) (PAF65-beta)
          Length = 589

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 3/109 (2%)
 Frame = +1

Query: 67  HRPTALLLTGSIDETVRAW---QPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDS 237
           H  +  L TGS D+TVR W   Q + + + +    GH   V+SL              D 
Sbjct: 435 HPNSNYLATGSTDKTVRLWSAQQGNSVRLFT----GHRGPVLSLSFSPNGKYLASAGEDQ 490

Query: 238 HIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 384
            ++++D+ SG     L      +  + F P              V++WD
Sbjct: 491 RLKLWDLASGTLFKELRGHTDSITSLAFSPDS-GLIASASMDNSVRVWD 538



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
 Frame = +1

Query: 85  LLTGSIDETVRAWQPDDLAVAS--PPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDV 258
           L +   D+ ++ W   DLA  +      GH   + SL            S+D+ +RV+D+
Sbjct: 483 LASAGEDQRLKLW---DLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDI 539

Query: 259 DSGASVTTLDAAPSEVWGV 315
            S    T  D +  E+ GV
Sbjct: 540 RSTCCNTPADGSSGELVGV 558

---

>TAF5L_HUMAN (O75529) TAF5-like RNA polymerase II p300/CBP-associated|
           factor-associated factor 65 kDa subunit 5L
           (PCAF-associated factor 65 beta) (PAF65-beta)
          Length = 589

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 3/109 (2%)
 Frame = +1

Query: 67  HRPTALLLTGSIDETVRAW---QPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDS 237
           H  +  L TGS D+TVR W   Q + + + +    GH   V+SL              D 
Sbjct: 435 HPNSNYLATGSTDKTVRLWSAQQGNSVRLFT----GHRGPVLSLAFSPNGKYLASAGEDQ 490

Query: 238 HIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 384
            ++++D+ SG     L      +  + F P              V++WD
Sbjct: 491 RLKLWDLASGTLYKELRGHTDNITSLTFSPDS-GLIASASMDNSVRVWD 538

---

>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 21/60 (35%), Positives = 27/60 (45%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 31
           +PGG    G      PP + G DGE  G PG  G     G +  RG   ++G PG +  R
Sbjct: 199 EPGGSGPMGPPGPPGPPGKNGDDGE-AGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHR 257

---

>PRP46_YARLI (Q6C709) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing|
           protein 46)
          Length = 472

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 2/110 (1%)
 Frame = +1

Query: 91  TGSIDETVRAWQPDDLAVAS--PPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 264
           TGS D+T++ W   DLA         GH +GV +L              D  ++ +D+++
Sbjct: 180 TGSADKTIKIW---DLATGKLRLTLTGHIMGVRALGVSPRHPYMFSGGEDKMVKCWDLET 236

Query: 265 GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWXPIASL 414
              V       S V+ +  HP  +            ++WD     P+  L
Sbjct: 237 NKVVRHYHGHLSAVYSLDIHPT-LDVLVSAGRDAVARVWDIRTRDPVVVL 285



 Score = 31.6 bits (70), Expect = 0.97
 Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 3/96 (3%)
 Frame = +1

Query: 52  VPAADHRPTA-LLLTGSIDETVRAWQPDDLAVASPPA--GGHALGVVSLXXXXXXXXXXX 222
           V + D  PT  +L++   D   R W   D+    P     GH   +  +           
Sbjct: 250 VYSLDIHPTLDVLVSAGRDAVARVW---DIRTRDPVVVLSGHKSTINRVKFQASEPQVIT 306

Query: 223 VSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPK 330
            S D  +R++++ +G ++TTL      V G+  HP+
Sbjct: 307 ASADETVRLWNLQAGKTMTTLTHHKKSVRGLTLHPE 342

---

>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor|
          Length = 1806

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
            PG    +G   E+ P    GRDG    VGLPG  G     GE+  +G +   G  G +
Sbjct: 1083 PGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSK 1140



 Score = 32.3 bits (72), Expect = 0.57
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           +PG     G      PP   G  G+  + GLPGADG     G+E + G   + G PG
Sbjct: 695 NPGPQGLPGPQGPIGPPGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPG 751



 Score = 32.0 bits (71), Expect = 0.74
 Identities = 20/55 (36%), Positives = 24/55 (43%)
 Frame = -1

Query: 210  DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
            DPG     G   E  PP   G+ G     PGA G   R GE+  +G   + G PG
Sbjct: 1340 DPGQPGPPGPSGEAGPPGPPGKRGP----PGAAGAEGRQGEKGAKGEAGAEGPPG 1390



 Score = 29.3 bits (64), Expect = 4.8
 Identities = 22/73 (30%), Positives = 26/73 (35%), Gaps = 8/73 (10%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDGEIV--------GLPGADGLVDRAGEEQRRGAVVSSGH 52
            PG    EG   +  P    G+DG           GLPGA G     G E  +G     G 
Sbjct: 999  PGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGS 1058

Query: 51   PGGRPDRVLVSPV 13
            PG R       P+
Sbjct: 1059 PGERGSAGTAGPI 1071



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 20/55 (36%), Positives = 23/55 (41%)
 Frame = -1

Query: 210  DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
            D G M   G    R P    G DG   G PG+ G V   GE+   G   + G PG
Sbjct: 1214 DVGPMGPPGPPGPRGPQGPNGADGP-QGPPGSVGSVGGVGEKGEPGEAGNPGPPG 1267

---

>POP1_SCHPO (P87060) WD-repeat protein pop1|
          Length = 775

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 24/101 (23%), Positives = 43/101 (42%)
 Frame = +1

Query: 82  LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 261
           L+++ S D T+R W+     V      GH   V S+              D+ IR+++++
Sbjct: 589 LIVSASYDGTLRVWKAST-GVCLHVLRGHVGRVYSVTINPSRQQCISAGTDAKIRIWNLE 647

Query: 262 SGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 384
           SG  + TL    + V  V F+ + I           +++WD
Sbjct: 648 SGELLQTLHGHSNLVSQVTFN-QNILVSASAPPDTSLRVWD 687

---

>KTNB1_HUMAN (Q9BVA0) Katanin p80 WD40-containing subunit B1 (Katanin p80|
           subunit B1) (p80 katanin)
          Length = 655

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 3/107 (2%)
 Frame = +1

Query: 82  LLLTGSIDETVRAW---QPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVF 252
           LL TG  D  V  W   +P+ +   +    GH   V S+            S    IRV+
Sbjct: 35  LLATGGDDCRVNLWSINKPNCIMSLT----GHTSPVESVRLNTPEELIVAGSQSGSIRVW 90

Query: 253 DVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 393
           D+++   + TL    + +  + FHP G            +KLWD  +
Sbjct: 91  DLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIRR 136



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 28/122 (22%), Positives = 44/122 (36%), Gaps = 10/122 (8%)
 Frame = +1

Query: 85  LLTGSIDETVRAWQPDDLAVASPPAG--GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDV 258
           L + + D TV+ W   DL      +   GH   V  +            S D  IR +D+
Sbjct: 162 LASAADDHTVKLW---DLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218

Query: 259 DSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK--------WXPIASL 414
           +    V+ ++  P  V  V F+P G            V  W+ E+        W  +A L
Sbjct: 219 EKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADL 278

Query: 415 PV 420
            +
Sbjct: 279 AI 280

---

>LIS1_RAT (P63004) Platelet-activating factor acetylhydrolase IB alpha|
           subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45
           kDa subunit) (PAF-AH alpha) (PAFAH alpha)
           (Lissencephaly-1 protein) (LIS-1)
          Length = 409

 Score = 32.3 bits (72), Expect = 0.57
 Identities = 29/136 (21%), Positives = 49/136 (36%), Gaps = 15/136 (11%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADH---------------RPTALLLTGSIDETVRAWQPDDLAVASPP 156
           HE  +   +W P + +               +P   LL+GS D+T++ W      +    
Sbjct: 274 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV-STGMCLMT 332

Query: 157 AGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGI 336
             GH   V  +            + D  +RV+D  +   + TL+A    V  + FH K  
Sbjct: 333 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH-KTA 391

Query: 337 XXXXXXXXXXXVKLWD 384
                      VK+W+
Sbjct: 392 PYVVTGSVDQTVKVWE 407

---

>LIS1_MOUSE (P63005) Platelet-activating factor acetylhydrolase IB alpha|
           subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45
           kDa subunit) (PAF-AH alpha) (PAFAH alpha)
           (Lissencephaly-1 protein) (LIS-1)
          Length = 409

 Score = 32.3 bits (72), Expect = 0.57
 Identities = 29/136 (21%), Positives = 49/136 (36%), Gaps = 15/136 (11%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADH---------------RPTALLLTGSIDETVRAWQPDDLAVASPP 156
           HE  +   +W P + +               +P   LL+GS D+T++ W      +    
Sbjct: 274 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV-STGMCLMT 332

Query: 157 AGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGI 336
             GH   V  +            + D  +RV+D  +   + TL+A    V  + FH K  
Sbjct: 333 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH-KTA 391

Query: 337 XXXXXXXXXXXVKLWD 384
                      VK+W+
Sbjct: 392 PYVVTGSVDQTVKVWE 407

---

>LIS1_MACFA (Q8HXX0) Platelet-activating factor acetylhydrolase IB alpha|
           subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45
           kDa subunit) (PAF-AH alpha) (PAFAH alpha)
           (Lissencephaly-1 protein) (LIS-1)
          Length = 409

 Score = 32.3 bits (72), Expect = 0.57
 Identities = 29/136 (21%), Positives = 49/136 (36%), Gaps = 15/136 (11%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADH---------------RPTALLLTGSIDETVRAWQPDDLAVASPP 156
           HE  +   +W P + +               +P   LL+GS D+T++ W      +    
Sbjct: 274 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV-STGMCLMT 332

Query: 157 AGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGI 336
             GH   V  +            + D  +RV+D  +   + TL+A    V  + FH K  
Sbjct: 333 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH-KTA 391

Query: 337 XXXXXXXXXXXVKLWD 384
                      VK+W+
Sbjct: 392 PYVVTGSVDQTVKVWE 407

---

>LIS1_HUMAN (P43034) Platelet-activating factor acetylhydrolase IB alpha|
           subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45
           kDa subunit) (PAF-AH alpha) (PAFAH alpha)
           (Lissencephaly-1 protein) (LIS-1)
          Length = 409

 Score = 32.3 bits (72), Expect = 0.57
 Identities = 29/136 (21%), Positives = 49/136 (36%), Gaps = 15/136 (11%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADH---------------RPTALLLTGSIDETVRAWQPDDLAVASPP 156
           HE  +   +W P + +               +P   LL+GS D+T++ W      +    
Sbjct: 274 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV-STGMCLMT 332

Query: 157 AGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGI 336
             GH   V  +            + D  +RV+D  +   + TL+A    V  + FH K  
Sbjct: 333 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH-KTA 391

Query: 337 XXXXXXXXXXXVKLWD 384
                      VK+W+
Sbjct: 392 PYVVTGSVDQTVKVWE 407

---

>LIS1_BOVIN (P43033) Platelet-activating factor acetylhydrolase IB alpha|
           subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45
           kDa subunit) (PAF-AH alpha) (PAFAH alpha)
           (Lissencephaly-1 protein) (LIS-1)
          Length = 409

 Score = 32.3 bits (72), Expect = 0.57
 Identities = 29/136 (21%), Positives = 49/136 (36%), Gaps = 15/136 (11%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADH---------------RPTALLLTGSIDETVRAWQPDDLAVASPP 156
           HE  +   +W P + +               +P   LL+GS D+T++ W      +    
Sbjct: 274 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV-STGMCLMT 332

Query: 157 AGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGI 336
             GH   V  +            + D  +RV+D  +   + TL+A    V  + FH K  
Sbjct: 333 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH-KTA 391

Query: 337 XXXXXXXXXXXVKLWD 384
                      VK+W+
Sbjct: 392 PYVVTGSVDQTVKVWE 407

---

>SFTPA_RAT (P08427) Pulmonary surfactant-associated protein A precursor (SP-A)|
           (PSP-A) (PSAP)
          Length = 248

 Score = 32.3 bits (72), Expect = 0.57
 Identities = 21/56 (37%), Positives = 24/56 (42%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
           PG    +G   +  PP   G  G + GLPG DGL    G    RG     G PG R
Sbjct: 42  PGRDGRDGVKGDPGPPGPMGPPGGMPGLPGRDGLPGAPGAPGERG---DKGEPGER 94

---

>DPY10_CAEEL (P35800) Cuticle collagen dpy-10 precursor (Protein dumpy-10)|
          Length = 356

 Score = 32.3 bits (72), Expect = 0.57
 Identities = 21/54 (38%), Positives = 24/54 (44%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           P G   EG   +  PP   G  G + GLPG +GL    GE    G    SG PG
Sbjct: 236 PEGDLKEGPPGDEGPPGPIGAPG-MPGLPGRNGLTGGQGERGWPGVSGESGEPG 288

---

>CORO7_HUMAN (P57737) Coronin-7 (70 kDa WD repeat tumor rejection antigen|
           homolog)
          Length = 925

 Score = 32.3 bits (72), Expect = 0.57
 Identities = 35/133 (26%), Positives = 42/133 (31%)
 Frame = +1

Query: 16  GAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXX 195
           G H D +    + P  D     LL TGS D TV+ W+      A P A G  LG   L  
Sbjct: 74  GCHSDLVTDLDFSPFDDF----LLATGSADRTVKLWRLPGPGQALPSAPGVVLGPEDL-- 127

Query: 196 XXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVK 375
                                            P EV  +QFHP              VK
Sbjct: 128 ---------------------------------PVEV--LQFHPTS-DGILVSAAGTTVK 151

Query: 376 LWDTEKWXPIASL 414
           +WD  K  P+  L
Sbjct: 152 VWDAAKQQPLTEL 164

---

>NPP17_CAEEL (Q93454) Nucleoporin-17 (Nuclear pore complex protein 17) (CeRAE1)|
          Length = 373

 Score = 32.3 bits (72), Expect = 0.57
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +1

Query: 10  VDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDD 135
           VDGA ED+I    + P    +P  +L  GS D T+R W  +D
Sbjct: 37  VDGAPEDTIQVIKFSPTPQDKP--MLACGSWDGTIRVWMFND 76



 Score = 28.9 bits (63), Expect = 6.3
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +1

Query: 7   SVDGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDL 138
           +V G H+  +    W+   +++    L+TGS D+T+R W   +L
Sbjct: 124 AVVGTHDGPVKTCHWINGNNYQ---CLMTGSFDKTLRFWDMKNL 164

---

>PRP46_ASHGO (Q75BY3) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing|
           protein 46)
          Length = 425

 Score = 32.3 bits (72), Expect = 0.57
 Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 2/104 (1%)
 Frame = +1

Query: 79  ALLLTGSIDETVRAWQPDDLAVA--SPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVF 252
           A   TGS D T+R W   DLA         GH + V  +            S D  ++ +
Sbjct: 127 AWFATGSNDSTIRVW---DLATGKLKVTLQGHIMTVRDICISARHPYMFSASQDKLVKCW 183

Query: 253 DVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 384
           D++    V       S V  V  HP  +           V++WD
Sbjct: 184 DLERNTVVRDFHGTLSGVHSVDLHP-SLDLIVSAGRDSVVRVWD 226

---

>TBL1Y_HUMAN (Q9BQ87) F-box-like/WD-repeat protein TBL1Y (Transducin beta-like|
           1Y protein) (Transducin-beta-like 1, Y-linked)
          Length = 522

 Score = 32.3 bits (72), Expect = 0.57
 Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 13/117 (11%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPP---------AGGHAL 174
           HE  ++  AW P +D     LL +GS D T R W  ++ +               GGH +
Sbjct: 178 HESEVFICAWNPVSD-----LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDV 232

Query: 175 ----GVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKG 333
                V SL            S D   R++  ++G   +TL      ++ ++++ KG
Sbjct: 233 PSNKDVTSLDWNSDGTLLAMGSYDGFARIW-TENGNLASTLGQHKGPIFALKWNKKG 288



 Score = 32.0 bits (71), Expect = 0.74
 Identities = 30/131 (22%), Positives = 47/131 (35%), Gaps = 8/131 (6%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ-PDDLAVASPPAGGHALGVV----- 183
           H + + A  W P+       LL + S D T++ W    D  V    A    +  +     
Sbjct: 358 HTNEVNAIKWDPSG-----MLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPT 412

Query: 184 --SLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXX 357
             +             S DS +R++DV+ G    TL      V+ V F P G        
Sbjct: 413 GPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDG-KYLASGS 471

Query: 358 XXXXVKLWDTE 390
               V +W+T+
Sbjct: 472 FDKYVHIWNTQ 482

---

>TBL1X_HUMAN (O60907) F-box-like/WD-repeat protein TBL1X (Transducin beta-like|
           1X protein) (Transducin-beta-like 1, X-linked) (SMAP55)
          Length = 526

 Score = 32.3 bits (72), Expect = 0.57
 Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 13/117 (11%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPP---------AGGHAL 174
           HE  ++  AW P +D     LL +GS D T R W  ++ +               GGH +
Sbjct: 180 HESEVFICAWNPVSD-----LLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDV 234

Query: 175 ----GVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKG 333
                V SL            S D   R++  D G   +TL      ++ ++++ KG
Sbjct: 235 PSNKDVTSLDWNTNGTLLATGSYDGFARIWTED-GNLASTLGQHKGPIFALKWNRKG 290

---

>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor|
          Length = 1736

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 34
            PG    +G   E+ P    GRDG    VGLPG  G    AGE+  +G V   G  G + +
Sbjct: 1041 PGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGN 1100

Query: 33   R 31
            +
Sbjct: 1101 K 1101



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
            PGG+ + G   E+  P   G  G + G PG  G     GE+   G    +G PG
Sbjct: 1200 PGGVGNLGPPGEKGEPGESGSPG-VQGEPGVKGPRGERGEKGESGQAGEAGPPG 1252



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 20/53 (37%), Positives = 23/53 (43%)
 Frame = -1

Query: 204 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           G   S G   E  PP + G  G   GLPG  G +   GE+  RG     G PG
Sbjct: 634 GPKGSLGPQGEPGPPGQQGTPGA-QGLPGPQGAIGPHGEKGARGKPGLPGMPG 685



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 8/64 (12%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDGEIV--------GLPGADGLVDRAGEEQRRGAVVSSGH 52
            PG    EG   +  PP   G+DG           GLPG  G     G E   G    +G 
Sbjct: 957  PGTSGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPAGPPGPAGS 1016

Query: 51   PGGR 40
            PG R
Sbjct: 1017 PGER 1020

---

>COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor|
          Length = 1736

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 34
            PG    +G   E+ P    GRDG    VGLPG  G    AGE+  +G V   G  G + +
Sbjct: 1041 PGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQKGTKGN 1100

Query: 33   R 31
            +
Sbjct: 1101 K 1101



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 19/56 (33%), Positives = 24/56 (42%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
            PGG+ + G   E+  P   G  G I G PG  G     GE+   G     G PG +
Sbjct: 1200 PGGVGNLGPPGEKGEPGESGSPG-IQGEPGVKGPRGERGEKGESGQPGEPGPPGAK 1254



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 8/64 (12%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDGEIV--------GLPGADGLVDRAGEEQRRGAVVSSGH 52
            PG    EG   +  PP   G+DG           GLPG  G     G E   G    +G 
Sbjct: 957  PGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGS 1016

Query: 51   PGGR 40
            PG R
Sbjct: 1017 PGER 1020



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           PG   + G H E+ P  + G    + G+PG+DG     G+E   G   + G  G
Sbjct: 660 PGPQGAIGPHGEKGPQGKPG----LPGMPGSDGPPGHPGKEGPPGTKGNQGPSG 709

---

>LIS1_PANTR (Q5IS43) Platelet-activating factor acetylhydrolase IB alpha|
           subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45
           kDa subunit) (PAF-AH alpha) (PAFAH alpha)
           (Lissencephaly-1 protein) (LIS-1)
          Length = 409

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 29/136 (21%), Positives = 49/136 (36%), Gaps = 15/136 (11%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADH---------------RPTALLLTGSIDETVRAWQPDDLAVASPP 156
           HE  +   +W P + +               +P   LL+GS D+T++ W      +    
Sbjct: 274 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV-STGMCLMT 332

Query: 157 AGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGI 336
             GH   V  +            + D  +RV+D  +   + TL+A    V  + FH K  
Sbjct: 333 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH-KTA 391

Query: 337 XXXXXXXXXXXVKLWD 384
                      VK+W+
Sbjct: 392 PYVVTGFVDQTVKVWE 407

---

>ERCC8_HUMAN (Q13216) DNA excision repair protein ERCC-8 (Cockayne syndrome WD|
           repeat protein CSA)
          Length = 396

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 26/127 (20%), Positives = 45/127 (35%), Gaps = 3/127 (2%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 201
           H  S+    W P      T +  + S D+T++ W  + L  A          V S     
Sbjct: 98  HRYSVETVQWYP----HDTGMFTSSSFDKTLKVWDTNTLQTAD--VFNFEETVYSHHMSP 151

Query: 202 XXXXXXXVSIDSH---IRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXV 372
                  V++ +    +++ D+ SG+    L     E+  V + P+             V
Sbjct: 152 VSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRV 211

Query: 373 KLWDTEK 393
           KLWD  +
Sbjct: 212 KLWDVRR 218

---

>WD51A_BOVIN (Q2TBP4) WD-repeat protein 51A|
          Length = 407

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 30/121 (24%), Positives = 47/121 (38%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 201
           H+D++    + P+       LL +GS D+TVR W P ++   S     H   V S+    
Sbjct: 60  HKDAVTCVNFSPSGH-----LLASGSRDKTVRIWVP-NVKGESTVFRAHTATVRSVHFCS 113

Query: 202 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 381
                   S D  ++V+       + +L    + V   +F P G            VKLW
Sbjct: 114 DGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDG-RLIVSASDDKTVKLW 172

Query: 382 D 384
           D
Sbjct: 173 D 173

---

>C1QT5_RAT (Q5FVH0) Complement C1q tumor necrosis factor-related protein 5|
           precursor
          Length = 243

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 23/56 (41%), Positives = 25/56 (44%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
           PG   + G H  +  P R GRDG   G PGA G     GE  R G     G PG R
Sbjct: 32  PGLPGTPGHHGSQGLPGRDGRDGR-DGAPGAPG---EKGEGGRPGLPGPRGEPGPR 83

---

>C1QT5_MOUSE (Q8K479) Complement C1q tumor necrosis factor-related protein 5|
           precursor
          Length = 243

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 23/56 (41%), Positives = 25/56 (44%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
           PG   + G H  +  P R GRDG   G PGA G     GE  R G     G PG R
Sbjct: 32  PGLPGTPGHHGSQGLPGRDGRDGR-DGAPGAPG---EKGEGGRPGLPGPRGEPGPR 83

---

>PR285_HUMAN (Q9BYK8) Peroxisomal proliferator-activated receptor A-interacting|
            complex 285 kDa protein (EC 3.6.1.-) (ATP-dependent
            helicase PRIC285) (PPAR-alpha-interacting complex protein
            285) (PPAR-gamma DBD-interacting protein 1) (PDIP1)
          Length = 2649

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 25/104 (24%), Positives = 39/104 (37%)
 Frame = -2

Query: 317  WTPQTSEGAASSVVTEAPESTSKTRMWLSMETXXXXXXXXXXARETTPSACPPAGGDATA 138
            W P+ ++  A+     APE          +              E    A  PA  D TA
Sbjct: 961  WPPRGTQAGAAGNWEAAPEPVG------DLAEEQAAVVTAMVKAEPGDEALSPASRDITA 1014

Query: 137  RSSGCQARTVSSIEPVRSSAVGRWSAAGTQAAAQIESS*APSTD 6
             ++  +A    + + V+   V    AAG  AAA +ES+ A   +
Sbjct: 1015 TTAQTEAAAAPAGDAVKEDVVPGACAAGAAAAAGVESTEAEDAE 1058

---

>IF2_MYCLE (Q9Z5I9) Translation initiation factor IF-2|
          Length = 924

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 22/60 (36%), Positives = 24/60 (40%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 31
           D GG    G     +P   GG  G   G PG  G        QR GA  + G PGG P R
Sbjct: 244 DAGGGNYRGGGVGALP---GGGSGGFRGRPGGGGHGGGGRPGQRGGAAGAFGRPGGAPRR 300

---

>CO4A2_MOUSE (P08122) Collagen alpha-2(IV) chain precursor|
          Length = 1707

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSGHPGG 43
           PG    +GD  ER  P   G  G++      G PGADG+    G+   RG     G  G 
Sbjct: 81  PGLQGRKGDKGERGVPGPTGPKGDVGARGVSGFPGADGIPGHPGQGGPRGRPGYDGCNGT 140

Query: 42  RPD 34
           R D
Sbjct: 141 RGD 143

---

>EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi|
          Length = 700

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +1

Query: 226 SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTE 390
           S DS +R++DV+ G+ + TL      V+ V F P G            V +W T+
Sbjct: 604 SFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDG-KHLASGSFDKCVHIWSTQ 657



 Score = 31.2 bits (69), Expect = 1.3
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDD 135
           HE  ++  AW P+ D     LL +GS D T R W   D
Sbjct: 354 HESEVFICAWNPSRD-----LLASGSGDSTARIWDMSD 386

---

>WDR47_MOUSE (Q8CGF6) WD-repeat protein 47|
          Length = 920

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
 Frame = +1

Query: 82   LLLTGSIDETVRAWQ---PDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVF 252
            ++ +GS D+TVR W    P  + V      G    V S+              DS   ++
Sbjct: 769  MIASGSQDKTVRFWDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLY 828

Query: 253  DVDSGASVTTLDAAPSEVWGVQFHP 327
            D+  G  V +     S+V  V+F P
Sbjct: 829  DIRGGRMVQSYHPHSSDVRSVRFSP 853

---

>CO9A1_CHICK (P12106) Collagen alpha-1(IX) chain precursor|
          Length = 920

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 13/77 (16%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGE--------IVGLPGADGLVDRAGEEQRRGAVVSSGH 52
           PG    +G+     PP   G DG+        + G PGADGL    G     G     G 
Sbjct: 284 PGIDGIDGERGPNGPPGPPGPDGDAGKAGSPGLPGEPGADGLTGPDGSPGATGPKGQKGE 343

Query: 51  PG-----GRPDRVLVSP 16
           PG     G P + L+ P
Sbjct: 344 PGPPGARGLPGKGLLGP 360

---

>SFTPA_SHEEP (Q9TT06) Pulmonary surfactant-associated protein A precursor (SP-A)|
           (PSP-A) (PSAP)
          Length = 248

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 20/56 (35%), Positives = 24/56 (42%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
           PG    +G   +  PP   G  G + GLPG DG+    G    RG     G PG R
Sbjct: 42  PGRDGRDGIKGDPGPPGPMGPPGGMPGLPGRDGMTGAPGLPGERG---EKGEPGER 94

---

>COPA_YEAST (P53622) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)|
          Length = 1201

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 1/91 (1%)
 Frame = +1

Query: 58  AADHRPTALLLTGSIDETVRAWQPDDL-AVASPPAGGHALGVVSLXXXXXXXXXXXVSID 234
           A+ H    L+++GS D  V+ W+     A       GH   V S+           V  D
Sbjct: 215 ASFHPTLPLIVSGSDDRQVKLWRMSATKAWEVDTCRGHTNNVDSVIFHPHQNLIISVGED 274

Query: 235 SHIRVFDVDSGASVTTLDAAPSEVWGVQFHP 327
             +RV+D+D    V          W +  HP
Sbjct: 275 KTLRVWDLDKRTPVKQFKRENDRFWLIAAHP 305

---

>PRP46_DEBHA (Q6BU94) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing|
           protein 46)
          Length = 417

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 27/110 (24%), Positives = 42/110 (38%), Gaps = 7/110 (6%)
 Frame = +1

Query: 85  LLTGSIDETVRAWQPDDLAVASPPAG-------GHALGVVSLXXXXXXXXXXXVSIDSHI 243
           L +GS D+TV+ W   DL   +   G       GH  G+ ++              DS I
Sbjct: 179 LFSGSEDKTVKCW---DLERTNSLLGCQIRNYHGHVGGIYAMALHPELDLLFTGGRDSVI 235

Query: 244 RVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 393
           RV+D+ S   +  L    S++  +     G            ++LWD  K
Sbjct: 236 RVWDLRSRTEIMVLSGHRSDITSIA-SQIGDPQIITSSMDATIRLWDIRK 284

---

>C1QT5_HUMAN (Q9BXJ0) Complement C1q tumor necrosis factor-related protein 5|
           precursor
          Length = 243

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 23/56 (41%), Positives = 25/56 (44%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
           PG   + G H  +  P R GRDG   G PGA G     GE  R G     G PG R
Sbjct: 32  PGLPGTPGHHGSQGLPGRDGRDGR-DGAPGAPG---EKGEGGRPGLPGPRGDPGPR 83

---

>CO4A1_DROME (P08120) Collagen alpha-1(IV) chain precursor|
          Length = 1775

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           PGG    G      PP   G+ G+  G PG +GL    G++   G   ++G PG
Sbjct: 333 PGGPGDRGRQGNFGPPGSTGQKGDR-GEPGLNGLPGNPGQKGEPGRAGATGEPG 385



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
 Frame = -1

Query: 204 GGMRSEGDHSERVPPCRGGRDGE-----IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           G M  +GD   +   CR G  G+     + G+PG DG     GE   RG     GH G
Sbjct: 558 GDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGARGPPGE---RGYPGERGHDG 612



 Score = 29.3 bits (64), Expect = 4.8
 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 8/59 (13%)
 Frame = -1

Query: 165  PPCRGGRDGEI--------VGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRVLVSPV 13
            PP   G  GE         +G PGADG V   G+    G    SG PG   ++  V P+
Sbjct: 858  PPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPI 916

---

>WD51A_MOUSE (Q8JZX3) WD-repeat protein 51A|
          Length = 405

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 30/121 (24%), Positives = 47/121 (38%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 201
           H+D++    + P+       LL +GS D+TVR W P ++   S     H   V S+    
Sbjct: 60  HKDAVTCVNFSPSGH-----LLASGSRDKTVRIWVP-NVKGESTVFRAHTATVRSVHFCS 113

Query: 202 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 381
                   S D  ++V+       + +L    + V   +F P G            VKLW
Sbjct: 114 DGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDG-RLIVSASDDKTVKLW 172

Query: 382 D 384
           D
Sbjct: 173 D 173

---

>CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodpasture antigen)|
          Length = 1670

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 26/69 (37%), Positives = 28/69 (40%), Gaps = 5/69 (7%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG-----G 43
           PGG  + G   ER      G  GEI GLPG  GL    G E   G     G PG     G
Sbjct: 749 PGGPGTPGFPGERG---NSGEHGEI-GLPGLPGLPGTPGNEGLDGPRGDPGQPGPPGEQG 804

Query: 42  RPDRVLVSP 16
            P R +  P
Sbjct: 805 PPGRCIEGP 813



 Score = 29.3 bits (64), Expect = 4.8
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
 Frame = -1

Query: 186 GDHSERVPPCRGGRDGEIV-------GLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           GD  +  PP   G  G  +       GLPG +GL    G++ RRG     G PG
Sbjct: 792 GDPGQPGPPGEQGPPGRCIEGPRGAQGLPGLNGL---KGQQGRRGKTGPKGDPG 842



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
 Frame = -1

Query: 186 GDHSERVPPCRGGRDG-----EIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           GD   R  P R G DG      + GLPG  G +  +GE+  +G     G PG
Sbjct: 554 GDPGLRGQPGRKGLDGIPGTLGVKGLPGPKGELALSGEKGDQGPPGDPGSPG 605

---

>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:|
           Chondrocalcin]
          Length = 1418

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 19/53 (35%), Positives = 23/53 (43%)
 Frame = -1

Query: 204 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           G   + G+  E  PP   G    I G PGADG     GE+   G    +G PG
Sbjct: 747 GARGAPGERGETGPPGTSG----IAGPPGADGQPGAKGEQGEAGQKGDAGAPG 795



 Score = 28.9 bits (63), Expect = 6.3
 Identities = 21/59 (35%), Positives = 24/59 (40%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 34
           +PGG+   G   ER  P  G R     G PG DGL    G    RG    +G  G   D
Sbjct: 427 EPGGVGPIGPPGERGAP--GNR-----GFPGQDGLAGPKGAPGERGPSGLAGPKGANGD 478



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 18/56 (32%), Positives = 23/56 (41%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
           PG    +G      PP  GG+ G+  G+PG  G     G    RG     G PG +
Sbjct: 590 PGPSGFQGLPGPPGPPGEGGKPGD-QGVPGEAGAPGLVGPRGERGFPGERGSPGAQ 644

---

>C1QT7_HUMAN (Q9BXJ2) Complement C1q tumor necrosis factor-related protein 7|
           precursor
          Length = 289

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGE--------IVGLPGADGLVDRAGEEQRRGAVVSSGH 52
           PG   S G H     P R GRDG           GL G  G +  AGE+  +G     G 
Sbjct: 46  PGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLRGKTGPLGLAGEKGDQGETGKKGP 105

Query: 51  PGGRPDRVLVSPV 13
            G   ++  V P+
Sbjct: 106 IGPEGEKGEVGPI 118

---

>WDR47_HUMAN (O94967) WD-repeat protein 47|
          Length = 919

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
 Frame = +1

Query: 82   LLLTGSIDETVRAWQ---PDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVF 252
            ++ +GS D+TVR W    P  + V      G    V S+              DS   ++
Sbjct: 768  MIASGSQDKTVRFWDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLY 827

Query: 253  DVDSGASVTTLDAAPSEVWGVQFHP 327
            D+  G  V +     S+V  V+F P
Sbjct: 828  DIRGGRMVQSYHPHSSDVRSVRFSP 852

---

>SFTPA_BOVIN (Q6RXL1) Pulmonary surfactant-associated protein A (SP-A) (PSP-A)|
           (PSAP) (Fragment)
          Length = 92

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 20/56 (35%), Positives = 24/56 (42%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
           PG    +G   +  PP   G  G + GLPG DG+    G    RG     G PG R
Sbjct: 18  PGRDGRDGIKGDPGPPGPMGPPGGMPGLPGRDGMTGAPGLPGERG---EKGEPGER 70

---

>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor|
          Length = 1463

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 20/60 (33%), Positives = 25/60 (41%)
 Frame = -1

Query: 210  DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 31
            + G   + G + ER PP   G  G+    PG  G   R G     G     G PGG+ DR
Sbjct: 978  ESGKPGASGHNGERGPPGPQGLPGQ----PGTAGEPGRDGNPGSDGQPGRDGSPGGKGDR 1033



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 19/54 (35%), Positives = 24/54 (44%)
 Frame = -1

Query: 204 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGG 43
           GG    G+H    P    G  G+  G PGA G     GE+   G   ++G PGG
Sbjct: 794 GGPGERGEHGPPGPAGFPGAPGQN-GEPGAKGERGAPGEKGEGGPPGAAGPPGG 846



 Score = 27.7 bits (60), Expect(2) = 1.0
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGL 106
           P G R +G   +  PP   GR+G+  GLPG  GL
Sbjct: 100 PDGNRPQGPKGDPGPPGIPGRNGD-PGLPGQPGL 132



 Score = 22.3 bits (46), Expect(2) = 1.0
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -1

Query: 129 GLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           G+ G  G    AG     G   SSGHPG
Sbjct: 164 GVGGMGGYPGPAGPPGPPGPPGSSGHPG 191

---

>CO4A6_HUMAN (Q14031) Collagen alpha-6(IV) chain precursor|
          Length = 1691

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
 Frame = -1

Query: 162  PCRGGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
            P   G DG++     VGLPGA G    AG     G   SSGH G
Sbjct: 1108 PGNKGEDGKVGVSGDVGLPGAPGFPGVAGMRGEPGLPGSSGHQG 1151



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 21/54 (38%), Positives = 25/54 (46%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           PG   S+GD     P    G  G+  GLPG DG+    G     GAV  +G PG
Sbjct: 151 PGQKGSKGD-PVLAPGSFKGMKGD-PGLPGLDGITGPQGAPGFPGAVGPAGPPG 202

---

>CDC4_CANAL (P53699) Cell division control protein 4|
          Length = 684

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = +1

Query: 82  LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 261
           ++++GS D TVR W   D    +    GH   V S             S+DS+I V++ +
Sbjct: 492 IIISGSYDSTVRVWDLLDDGHCTHVLQGHLDRVYSTAIDFHSKTCFSGSMDSNINVWNFE 551

Query: 262 SG 267
           +G
Sbjct: 552 TG 553

---

>GRWD1_HUMAN (Q9BQ67) Glutamate-rich WD repeat-containing protein 1|
          Length = 446

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 29/103 (28%), Positives = 39/103 (37%), Gaps = 8/103 (7%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDD---LAVASPPAGGHALGVVSLX 192
           H    +A  W P    R T  LLTG   + +  W P D     V   P  GH   V  L 
Sbjct: 213 HMGEGFALDWSP----RVTGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFVGHTRSVEDLQ 268

Query: 193 -XXXXXXXXXXVSIDSHIRVFDVDSGAS----VTTLDAAPSEV 306
                       S D+ IR++D+ +  S    +TT  A   +V
Sbjct: 269 WSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDV 311

---

>KTNB1_STRPU (O61585) Katanin p80 WD40-containing subunit B1 (Katanin p80|
           subunit B1) (p80 katanin)
          Length = 690

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 29/129 (22%), Positives = 47/129 (36%), Gaps = 4/129 (3%)
 Frame = +1

Query: 19  AHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPA----GGHALGVVS 186
           AH  ++   A  P +      +++TG  D+ V  W     AV          GH   V S
Sbjct: 14  AHSSNVNCLALGPMSGR----VMVTGGEDKKVNLW-----AVGKQNCIISLSGHTSPVDS 64

Query: 187 LXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXX 366
           +            S    ++++D++    V TL    + +  + FHP G           
Sbjct: 65  VKFNSSEELVVAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDFHPFG-EFVASGSTDT 123

Query: 367 XVKLWDTEK 393
            VKLWD  +
Sbjct: 124 NVKLWDVRR 132



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
 Frame = +1

Query: 85  LLTGSIDETVRAWQPDDLAVAS--PPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDV 258
           L+T S D T++ W   DL +         H  GV  +            S D  ++ +D+
Sbjct: 158 LVTASEDTTIKLW---DLTMGKLFQEFKNHTGGVTGIEFHPNEFLLASGSSDRTVQFWDL 214

Query: 259 DSGASVTTLDAAPSEVWGVQFHPKG 333
           ++   V++     S V  + FHP G
Sbjct: 215 ETFQLVSSTSPGASAVRSISFHPDG 239

---

>WD51A_HUMAN (Q8NBT0) WD-repeat protein 51A|
          Length = 407

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 30/121 (24%), Positives = 47/121 (38%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 201
           H+D++    + P+       LL +GS D+TVR W P ++   S     H   V S+    
Sbjct: 60  HKDAVTCVNFSPSGH-----LLASGSRDKTVRIWVP-NVKGESTVFRAHTATVRSVHFCS 113

Query: 202 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 381
                   S D  ++V+       + +L    + V   +F P G            VKLW
Sbjct: 114 DGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDG-RLIVSASDDKTVKLW 172

Query: 382 D 384
           D
Sbjct: 173 D 173



 Score = 28.9 bits (63), Expect = 6.3
 Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 1/96 (1%)
 Frame = +1

Query: 49  WVPAADHRPTA-LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXV 225
           WV  A   P   L+++ S D+TV+ W              H   V  +            
Sbjct: 147 WVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCE-HGGFVTYVDFHPSGTCIAAA 205

Query: 226 SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKG 333
            +D+ ++V+DV +   +       + V G+ FHP G
Sbjct: 206 GMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSG 241

---

>CO1A2_CHICK (P02467) Collagen alpha-2(I) chain precursor (Fragments)|
          Length = 1362

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 24/67 (35%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 34
            PG    +G+     PP R G  G     G PG  G     G     G V  SG PG R D
Sbjct: 919  PGEAGRDGNPGNDGPPGRDGAPGFKGERGAPGNPGPSGALGAPGPHGQVGPSGKPGNRGD 978

Query: 33   RVLVSPV 13
               V PV
Sbjct: 979  PGPVGPV 985



 Score = 30.4 bits (67), Expect = 2.2
 Identities = 19/55 (34%), Positives = 24/55 (43%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           +PG    +G      PP + G DG   G PG  G    AG +  RG   + G PG
Sbjct: 121 EPGQTGPQGPRGPPGPPGKAGEDGH-PGKPGRPGERGVAGPQGARGFPGTPGPPG 174



 Score = 29.3 bits (64), Expect = 4.8
 Identities = 24/65 (36%), Positives = 26/65 (40%), Gaps = 7/65 (10%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG--- 46
           + G   S G+     PP   G  GE    GLPGADG     G    RGA    G  G   
Sbjct: 375 EEGKRGSNGEPGSAGPPGPAGLRGEPGSRGLPGADGRAGVMGPAGNRGASGPVGAKGPNG 434

Query: 45  --GRP 37
             GRP
Sbjct: 435 DAGRP 439

---

>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor|
          Length = 1460

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 20/60 (33%), Positives = 26/60 (43%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 31
           +PG     G      PP + G DGE  G PG  G     G +  RG   ++G PG +  R
Sbjct: 206 EPGASGPMGPRGPPGPPGKNGDDGE-AGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHR 264

---

>Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163|
          Length = 1693

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 34/121 (28%), Positives = 45/121 (37%)
 Frame = +1

Query: 22   HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 201
            HE  ++ A +  +AD R    +LT S+D T R W  D L        GH   V       
Sbjct: 1505 HEGPVYFAQF--SADSR---YILTASVDNTARIW--DFLGRPLLTLAGHQSIVYQARFSP 1557

Query: 202  XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 381
                   VS D   R++D  SG +V  L      V  V + P G             +LW
Sbjct: 1558 EGNLIATVSADHTARLWD-RSGKTVAVLYGHQGLVGTVDWSPDG-QMLVTASNDGTARLW 1615

Query: 382  D 384
            D
Sbjct: 1616 D 1616

---

>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor|
          Length = 1464

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 20/60 (33%), Positives = 26/60 (43%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 31
           +PG     G      PP + G DGE  G PG  G     G +  RG   ++G PG +  R
Sbjct: 210 EPGASGPMGPRGPPGPPGKNGDDGE-AGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHR 268

---

>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)|
          Length = 779

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 20/60 (33%), Positives = 26/60 (43%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 31
           +PG     G      PP + G DGE  G PG  G     G +  RG   ++G PG +  R
Sbjct: 48  EPGASGPMGPRGPPGPPGKNGDDGE-AGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHR 106

---

>PWP2_SCHPO (Q9C1X1) Periodic tryptophan protein 2 homolog|
          Length = 854

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = +1

Query: 163 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKG 333
           GH   V SL            S D  +R++D+ S + +      PS+V  + FHP G
Sbjct: 465 GHEGPVSSLSFNSSGSLLASGSWDKTVRIWDIFSRSGIVEPLPIPSDVLSLAFHPDG 521

---

>TAF73_SCHPO (O74319) Transcription initiation factor TFIID subunit taf73|
           (Transcription initiation factor TFIID 73 kDa subunit)
           (TAFII-73)
          Length = 642

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 18/81 (22%), Positives = 29/81 (35%)
 Frame = +1

Query: 163 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXX 342
           GH   V  +            S D   R++  D+ +++       + +W VQF P G   
Sbjct: 401 GHTRPVFGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFG-YY 459

Query: 343 XXXXXXXXXVKLWDTEKWXPI 405
                     +LWD E   P+
Sbjct: 460 FATASHDQTARLWDVEHAAPL 480

---

>PWP1_MOUSE (Q99LL5) Periodic tryptophan protein 1 homolog|
          Length = 501

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 1/80 (1%)
 Frame = +1

Query: 148 SPPAGGHALGVVSLX-XXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFH 324
           S  A GH   V+ L             S DS + ++D+  G SV  L A   +V  +QFH
Sbjct: 248 SSSAEGHTDAVLDLSWNKTVRNVLASASADSTVVLWDLSVGKSVARLTAHTDKVQTLQFH 307

Query: 325 PKGIXXXXXXXXXXXVKLWD 384
           P              V L+D
Sbjct: 308 PFEAQTLISGSYDKSVALYD 327

---

>SFTPA_PIG (P49874) Pulmonary surfactant-associated protein A precursor (SP-A)|
           (PSP-A) (PSAP)
          Length = 249

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 19/56 (33%), Positives = 24/56 (42%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
           PG    +G   +  PP   G  G + G PG DG++   G    RG     G PG R
Sbjct: 42  PGRDGRDGIKGDPGPPGPMGPPGGMAGPPGQDGMIGAPGLPGERG---EKGEPGER 94

---

>WDR31_MOUSE (Q9JHB4) WD-repeat protein 31 (Spermatid WD-repeat protein) (spWD)|
          Length = 367

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 32/132 (24%), Positives = 47/132 (35%), Gaps = 10/132 (7%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 201
           HE  I   A +P A+        + S D+TV  W     +       GHA+ V  L    
Sbjct: 102 HEREITKIACIPKANQ-----FFSASRDKTVLMWDLQGSSHPRQQLSGHAMVVTGLAVSP 156

Query: 202 XXXXXXXVSIDSHIRVFDVDSGAS----------VTTLDAAPSEVWGVQFHPKGIXXXXX 351
                   S D+ + ++DV +G            VT L   PSE + VQ           
Sbjct: 157 DSSQLCTGSRDNSLLLWDVGTGQCVERASVSRNLVTHLCWVPSEPYIVQ----------- 205

Query: 352 XXXXXXVKLWDT 387
                 ++LWD+
Sbjct: 206 TSEDKTIRLWDS 217

---

>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)|
          Length = 1027

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 5/63 (7%)
 Frame = -1

Query: 204 GGMRSEGDHSERVPPCRGGRDGEIV-----GLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
           G   S GD   R      G+DGE       GLPG  GL    GE    G+    G PG  
Sbjct: 571 GSKGSRGDIGPRGKAGERGKDGERGERGENGLPGPSGLAASKGERGDMGSPGERGSPGPA 630

Query: 39  PDR 31
            +R
Sbjct: 631 GER 633



 Score = 29.3 bits (64), Expect = 4.8
 Identities = 20/54 (37%), Positives = 24/54 (44%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           PG     G    R      GRDG+  GLPG  G+   AG     G + S+G PG
Sbjct: 123 PGPAGPSGPIGPRGQTGERGRDGKS-GLPGLRGVDGLAGPPGPPGPIGSTGSPG 175

---

>CO2A1_BOVIN (P02459) Collagen alpha-1(II) chain precursor (Fragments)|
          Length = 747

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 25/63 (39%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRR---GAVVSSGHPG-- 46
           +PGG    G   ER  P  G R     G PG DG+    G    R   GAV   G PG  
Sbjct: 311 EPGGAGPAGPPGERGAP--GSR-----GFPGQDGIAGPKGPPGERGSPGAVGPKGSPGEA 363

Query: 45  GRP 37
           GRP
Sbjct: 364 GRP 366



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 18/56 (32%), Positives = 23/56 (41%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
           PG    +G      PP  GG+ G+  G+PG  G     G    RG     G PG +
Sbjct: 474 PGPSGFQGLPGPPGPPGEGGKPGD-QGVPGEAGAPGLVGPRGERGFPGERGSPGAQ 528

---

>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)|
          Length = 1262

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 21/55 (38%), Positives = 26/55 (47%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGG 43
           PG   + G+  ER  P   G  G+  G PG  G   RAG    +G +  SG PGG
Sbjct: 355 PGPAGASGNPGERGEP---GPQGQ-AGPPGPQGPPGRAGSPGGKGEMGPSGIPGG 405



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 18/55 (32%), Positives = 21/55 (38%)
 Frame = -1

Query: 204 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
           GG    G    + PP   G  G   GLPG  G+    G     G     G PGG+
Sbjct: 695 GGPGPAGSEGAKGPPGPPGAPGG-TGLPGLQGMPGERGASGSPGPKGDKGEPGGK 748

---

>TUP1_CANAL (P56093) Transcriptional repressor TUP1|
          Length = 514

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 34/131 (25%), Positives = 49/131 (37%), Gaps = 8/131 (6%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAG-GHALGVVSLXXX 198
           HE  I++  + P  D      L++GS D +VR W   DL  +          GV ++   
Sbjct: 298 HEQDIYSLDFFPDGDR-----LVSGSGDRSVRIW---DLRTSQCSLTLSIEDGVTTVAVS 349

Query: 199 XXXXXXXXVSIDSHIRVFDVDSGASVTTLDAA-------PSEVWGVQFHPKGIXXXXXXX 357
                    S+D  +RV+D  +G  V  LD+           V+ V F   G        
Sbjct: 350 PDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNG-EQIASGS 408

Query: 358 XXXXVKLWDTE 390
               VKLW  E
Sbjct: 409 LDRTVKLWHLE 419

---

>CUC2C_HAECO (P16252) Cuticle collagen 2C (Fragment)|
          Length = 210

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRP 37
           PG     G      PP   G  G   G PGA G     G++   GA  ++GHPG  G+P
Sbjct: 126 PGPPGPPGPTGPEGPPGPNGAPGH-PGAPGAPGEKGPRGQDGHPGAPGNAGHPGQPGQP 183

---

>RS6E_METKA (Q8TVE6) 30S ribosomal protein S6e|
          Length = 130

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 18/78 (23%)
 Frame = -1

Query: 210 DPGGMRS-----EGDHSERVPPCRGGR--DGEIVGLPG----ADGLVDRAGEEQR----- 79
           DP   RS     +G+ +E++   R G   DGEIVGLPG      G  D+ G   R     
Sbjct: 10  DPEKARSYQVEVKGEDAEKLIGKRIGDVIDGEIVGLPGYKLKITGGTDKDGFPMRPDIHG 69

Query: 78  --RGAVVSSGHPGGRPDR 31
             R  ++ SG PG RP+R
Sbjct: 70  PVRVRLLLSGPPGFRPER 87

---

>COEA1_MOUSE (Q80X19) Collagen alpha-1(XIV) chain precursor|
          Length = 1797

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 10/69 (14%)
 Frame = -1

Query: 207  PGGMRSEGDHSERVPPCRG--GRDGEI--------VGLPGADGLVDRAGEEQRRGAVVSS 58
            PGG+ S G      P  RG  G+DG          +G+PGA G+    G    +GA+   
Sbjct: 1539 PGGVGSPGRDGS--PGQRGFPGKDGSSGPPGPPGPIGIPGAPGVPGITGSMGPQGALGPP 1596

Query: 57   GHPGGRPDR 31
            G PG + +R
Sbjct: 1597 GVPGAKGER 1605

---

>WDR57_MOUSE (Q6PE01) WD-repeat protein 57|
          Length = 358

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 25/111 (22%), Positives = 42/111 (37%)
 Frame = +1

Query: 70  RPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRV 249
           R   L+ TGS D TV+ W  D    A+     +   V+++             ID+ I+V
Sbjct: 163 RGPQLVCTGSDDGTVKLW--DIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 220

Query: 250 FDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWXP 402
           +D+       T+      V G+    +G            V++WD   + P
Sbjct: 221 WDLRQNKLTYTMRGHADSVTGLSLSSEG-SYLLSNAMDNTVRVWDVRPFAP 270

---

>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor|
          Length = 1372

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIV-----GLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           PG   S G    R P    GR GE       GLPG+ G V  AG+E   G     G PG
Sbjct: 426 PGNRGSTGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPG 484

---

>C1QT7_MOUSE (Q8BVD7) Complement C1q tumor necrosis factor-related protein 7|
           precursor
          Length = 289

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 8/72 (11%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGE--------IVGLPGADGLVDRAGEEQRRGAVVSSGH 52
           PG   S G H     P R GRDG           GL G  G +  AGE+  +G     G 
Sbjct: 46  PGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAGLKGKTGPLGLAGEKGDQGETGKKGP 105

Query: 51  PGGRPDRVLVSP 16
            G   ++  V P
Sbjct: 106 IGPEGEKGEVGP 117

---

>RAE1L_ARATH (Q38942) Rae1-like protein At1g80670|
          Length = 349

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW 123
           HE  I A AW+P  +     LL TGS D+T++ W
Sbjct: 113 HEGPIAAMAWIPGMN-----LLATGSWDKTLKYW 141

---

>CO4A2_HUMAN (P08572) Collagen alpha-2(IV) chain precursor|
          Length = 1712

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSGHPGG 43
           PG    +GD  ER  P   G  G++      G PGADG+    G+   RG     G  G 
Sbjct: 81  PGLQGRKGDKGERGAPGVTGPKGDVGARGVSGFPGADGIPGHPGQGGPRGRPGYDGCNGT 140

Query: 42  RPD 34
           + D
Sbjct: 141 QGD 143

---

>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor|
          Length = 1366

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 21/64 (32%), Positives = 26/64 (40%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRV 28
           PG   + GD  E  P    G  G   G PG  G V  AG     G   ++G PG + +R 
Sbjct: 684 PGPAGATGDRGEAGPAGPAGPAGPR-GTPGERGEVGPAGPNGFAGPAGAAGQPGAKGERG 742

Query: 27  LVSP 16
              P
Sbjct: 743 TKGP 746



 Score = 29.3 bits (64), Expect = 4.8
 Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 5/59 (8%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIV-----GLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           PG   + G    R P    GR GE       G PGA G V  AG+E   G     G PG
Sbjct: 420 PGPRGATGPAGVRGPNGDSGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPG 478

---

>WDR57_PONPY (Q5RF51) WD-repeat protein 57|
          Length = 357

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 25/111 (22%), Positives = 42/111 (37%)
 Frame = +1

Query: 70  RPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRV 249
           R   L+ TGS D TV+ W  D    A+     +   V+++             ID+ I+V
Sbjct: 162 RGPQLVCTGSDDGTVKLW--DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 219

Query: 250 FDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWXP 402
           +D+       T+      V G+    +G            V++WD   + P
Sbjct: 220 WDLRQNKLTYTMRGHADSVTGLSLSSEG-SYLLSNAMDNTVRVWDVRPFAP 269

---

>WDR57_HUMAN (Q96DI7) WD-repeat protein 57 (Prp8-binding protein) (hPRP8BP) (U5|
           snRNP-specific 40 kDa protein) (38 kDa splicing factor)
          Length = 357

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 25/111 (22%), Positives = 42/111 (37%)
 Frame = +1

Query: 70  RPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRV 249
           R   L+ TGS D TV+ W  D    A+     +   V+++             ID+ I+V
Sbjct: 162 RGPQLVCTGSDDGTVKLW--DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKV 219

Query: 250 FDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWXP 402
           +D+       T+      V G+    +G            V++WD   + P
Sbjct: 220 WDLRQNKLTYTMRGHADSVTGLSLSSEG-SYLLSNAMDNTVRVWDVRPFAP 269

---

>SFTPA_MOUSE (P35242) Pulmonary surfactant-associated protein A precursor (SP-A)|
           (PSP-A) (PSAP)
          Length = 248

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 20/56 (35%), Positives = 23/56 (41%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
           PG    +G   +  PP   G  G + GLPG DGL    G     G     G PG R
Sbjct: 42  PGRDGRDGIKGDPGPPGPMGPPGGMPGLPGRDGLPGAPGAPGEHG---DKGEPGER 94

---

>PRP19_HUMAN (Q9UMS4) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homolog) (Nuclear|
           matrix protein 200) (hPso4)
          Length = 504

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 22/86 (25%), Positives = 35/86 (40%)
 Frame = +1

Query: 76  TALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFD 255
           T  +LTG  D+ V  +      + +    GH   V S+            S D+ IR++ 
Sbjct: 234 TNKILTGGADKNVVVFDKSSEQILAT-LKGHTKKVTSVVFHPSQDLVFSASPDATIRIWS 292

Query: 256 VDSGASVTTLDAAPSEVWGVQFHPKG 333
           V + + V  + A  S V G+  H  G
Sbjct: 293 VPNASCVQVVRAHESAVTGLSLHATG 318

---

>PRP19_CAEEL (Q10051) PRP19/PSO4 homolog|
          Length = 492

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 22/84 (26%), Positives = 34/84 (40%)
 Frame = +1

Query: 82  LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 261
           L LTG ID+TV  +  +   V      GH   + ++            S DSHIRV+   
Sbjct: 223 LSLTGGIDKTVVLYDYEKEQVMQT-FKGHNKKINAVVLHPDNITAISASADSHIRVWSAT 281

Query: 262 SGASVTTLDAAPSEVWGVQFHPKG 333
             +S   +D   + V  +  +  G
Sbjct: 282 DSSSKAIIDVHQAPVTDISLNASG 305

---

>TAF5_SCHPO (O13282) Transcription initiation factor TFIID subunit 5|
           (Transcription initiation factor TFIID 72 kDa subunit)
           (TAFII-72)
          Length = 643

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 22/109 (20%), Positives = 40/109 (36%)
 Frame = +1

Query: 67  HRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIR 246
           H  +A +LTGS D+T R W       +     GH   V ++              +  I 
Sbjct: 472 HPNSAYVLTGSSDKTCRLWDV-HRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIH 530

Query: 247 VFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 393
           ++D+ +G  + T+      ++ + F  +             V+ WD  K
Sbjct: 531 LWDIGTGRRIKTMRGHRGNIYSLSFSRES-TVLVSGGSDCTVRAWDVFK 578

---

>SWD3_YEAST (P38123) COMPASS component SWD3 (Complex proteins associated with|
           SET1 protein SWD3) (Set1C component SWD3)
          Length = 315

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +1

Query: 67  HRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXX-XXXXXXXXXVSIDSHI 243
           +R   LL T S+DE+++ W   + ++       H+  VVS+             S D  I
Sbjct: 105 NRKGNLLFTSSMDESIKIWDTLNGSLMK-TISAHSEAVVSVDVPMNDSSILSSGSYDGLI 163

Query: 244 RVFDVDSGASVTTL 285
           R+FD ++G  + TL
Sbjct: 164 RIFDAETGHCLKTL 177

---

>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor|
          Length = 1364

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 21/64 (32%), Positives = 26/64 (40%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRV 28
           PG   + GD  E  P    G  G   G PG  G V  AG     G   ++G PG + +R 
Sbjct: 682 PGPAGANGDRGEAGPAGPAGPAGPR-GSPGERGEVGPAGPNGFAGPAGAAGQPGAKGERG 740

Query: 27  LVSP 16
              P
Sbjct: 741 TKGP 744

---

>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor|
          Length = 1464

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSGHPGG 43
           PG    +G      PP   G+ GE      VG PGA G    +G    RG   ++G PG 
Sbjct: 634 PGPQGLQGIPGTGGPPGENGKPGEPGPKGEVGAPGAPGGKGDSGAPGERGPPGTAGIPGA 693

Query: 42  R 40
           R
Sbjct: 694 R 694



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 20/60 (33%), Positives = 25/60 (41%)
 Frame = -1

Query: 210  DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 31
            + G   + G + ER PP   G  G+    PG  G   R G     G     G PGG+ DR
Sbjct: 978  ESGKPGASGHNGERGPPGPQGLPGQ----PGTAGEPGRDGNPGSDGQPGRDGSPGGKGDR 1033



 Score = 29.3 bits (64), Expect = 4.8
 Identities = 19/54 (35%), Positives = 21/54 (38%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           PGG    G   ER PP          G+PGA G     G E  +G     G PG
Sbjct: 670 PGGKGDSGAPGERGPP-------GTAGIPGARGGAGPPGPEGGKGPAGPPGPPG 716

---

>KI21A_HUMAN (Q7Z4S6) Kinesin family member 21A (Kinesin-like protein KIF2)|
            (NY-REN-62 antigen)
          Length = 1674

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
 Frame = +1

Query: 82   LLLTGSIDETVRAWQPDDLAVASP--PAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFD 255
            LL TGS D T + W   +L         GGH   VVS+           VS  S+I+V+D
Sbjct: 1359 LLFTGSKDRTCKVW---NLVTGQEIMSLGGHPNNVVSVKYCNYTSLVFTVS-TSYIKVWD 1414

Query: 256  V-DSGASVTTLDAA 294
            + DS   + TL ++
Sbjct: 1415 IRDSAKCIRTLTSS 1428

---

>YYAE_BACSU (P37519) Hypothetical protein yyaE|
          Length = 667

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 318 VPPQGYCSGCSWWWQWISKTVGHGEVXTY 404
           V PQG     SW W  ++K +G GE+  Y
Sbjct: 442 VEPQGEAKSDSWIWSELAKRLGFGELFEY 470

---

>TAF5_YEAST (P38129) Transcription initiation factor TFIID subunit 5|
           (TBP-associated factor 5) (TBP-associated factor 90 kDa)
           (TAFII-90)
          Length = 798

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 28/121 (23%), Positives = 45/121 (37%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 201
           H  ++++ ++ P   +     LL+GS D+TVR W   D   A     GH   V  +    
Sbjct: 524 HSGTVYSTSFSPDNKY-----LLSGSEDKTVRLWSM-DTHTALVSYKGHNHPVWDVSFSP 577

Query: 202 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 381
                   S D   R++  D    +       ++V  V FHP G             ++W
Sbjct: 578 LGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGC-YVFTGSSDKTCRMW 636

Query: 382 D 384
           D
Sbjct: 637 D 637

---

>COL8_CAEEL (P18833) Cuticle collagen 8 precursor|
          Length = 282

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIV--GLPGADGLVDRAGEEQRRGAVVSSGHPG--GR 40
           PG     G+      P + GR G     G PG +G    AGE+  +G V   GHPG  GR
Sbjct: 191 PGPPGPRGEPGTEYRPGQAGRAGPPGPRGPPGPEGNPGGAGEDGNQGPV---GHPGVPGR 247

Query: 39  P 37
           P
Sbjct: 248 P 248

---

>PHK_RHOPA (Q6N976) Probable phosphoketolase (EC 4.1.2.-)|
          Length = 783

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +1

Query: 4   KSVDGAHEDSIWAAAWVPAADHR-PTALLLTGSIDETVRAWQPDDL 138
           K VDG   +  W A  VP AD + P  L L   +++ +R+++PD+L
Sbjct: 291 KQVDGKPVEGTWRAHQVPIADFKNPEHLTL---LEDWMRSYRPDEL 333

---

>WDR1_MOUSE (O88342) WD-repeat protein 1 (Actin-interacting protein 1) (AIP1)|
          Length = 605

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +1

Query: 19  AHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASP-PAGGHAL 174
           AH+  I+A +W P + H     LL+ S D+T + W  +  +V S  P G + L
Sbjct: 231 AHDGGIYAISWSPDSTH-----LLSASGDKTSKIWDVNVNSVVSTFPMGSNVL 278

---

>MET30_YEAST (P39014) F-box protein MET30 (Methionine requiring protein 30) (E3|
           ubiquitin ligase complex SCF(Met30) subunit MET30)
          Length = 640

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 27/100 (27%), Positives = 43/100 (43%)
 Frame = +1

Query: 85  LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 264
           L+TGS+D+T+R W        S    GH+  V+S+            S D  ++V+ V+S
Sbjct: 355 LITGSLDKTIRVWNYITGECIS-TYRGHSDSVLSVDSYQKVIVSG--SADKTVKVWHVES 411

Query: 265 GASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 384
             +  TL      V  V+ HPK             +++WD
Sbjct: 412 -RTCYTLRGHTEWVNCVKLHPKSF-SCFSCSDDTTIRMWD 449

---

>CO6A3_HUMAN (P12111) Collagen alpha-3(VI) chain precursor|
          Length = 3176

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 20/60 (33%), Positives = 27/60 (45%)
 Frame = -1

Query: 210  DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDR 31
            DPG      D  ER P    G  G + G+PG DG+    GE  + G     G PG + ++
Sbjct: 2156 DPGNPGQ--DSQERGPKGETGDLGPM-GVPGRDGVPGGPGETGKNGGFGRRGPPGAKGNK 2212

---

>IFA1_CAEEL (P90901) Intermediate filament protein ifa-1 (Intermediate filament|
           protein A1) (IF-A1) (Cel IF A1)
          Length = 575

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 20/53 (37%), Positives = 25/53 (47%)
 Frame = -2

Query: 182 TTPSACPPAGGDATARSSGCQARTVSSIEPVRSSAVGRWSAAGTQAAAQIESS 24
           TTPSA  P GG  T   +  Q R +  +  +RS A    S  G  AA+ I  S
Sbjct: 14  TTPSARAPLGGRTTGNVTS-QDRMLKIVTEMRSGAGSGLSPFGQNAASTIRDS 65

---

>CO6A2_CHICK (P15988) Collagen alpha-2(VI) chain precursor|
          Length = 1022

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 22/70 (31%), Positives = 24/70 (34%), Gaps = 11/70 (15%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGE-----------IVGLPGADGLVDRAGEEQRRGAVV 64
           D G     GD   +  P R GR G            I G PGA G     G +   G   
Sbjct: 359 DAGDQGERGDEGMKGDPGRPGRSGPPGPPGEKGSPGIPGNPGAQGPGGTKGRKGETGPPG 418

Query: 63  SSGHPGGRPD 34
             G PG R D
Sbjct: 419 PKGEPGRRGD 428

---

>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor|
          Length = 1366

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIV-----GLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           PG   + G    R P    GR GE       GLPG+ G +  AG+E   G     G PG
Sbjct: 420 PGSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNIGPAGKEGPVGLPGIDGRPG 478

---

>WD51B_PONPY (Q5RD06) WD-repeat protein 51B|
          Length = 451

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 30/122 (24%), Positives = 45/122 (36%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 201
           H+D + +  + P  +     LL + S D TVR W PD     S     H   V S+    
Sbjct: 59  HKDVVTSVQFSPHGN-----LLASASRDRTVRLWIPDKRGKFS-EFKAHTAPVRSVDFSA 112

Query: 202 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 381
                   S D  I+V+ +     + +L      V   +F P G            +K+W
Sbjct: 113 DGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDG-RLIVSCSEDKTIKIW 171

Query: 382 DT 387
           DT
Sbjct: 172 DT 173

---

>MARCO_HUMAN (Q9UEW3) Macrophage receptor MARCO (Macrophage receptor with|
           collagenous structure) (Scavenger receptor class A
           member 2)
          Length = 520

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 18/56 (32%), Positives = 24/56 (42%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
           PG   S+GD     PP        + G PGA G   + G +   G   + GHPG +
Sbjct: 273 PGAQGSKGDFGRPGPP-------GLAGFPGAKGDQGQPGLQGVPGPPGAVGHPGAK 321

---

>CO9A1_HUMAN (P20849) Collagen alpha-1(IX) chain precursor|
          Length = 921

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 20/55 (36%), Positives = 23/55 (41%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           +PG    +G   E       G  G+I GLPG  G     GE   RG   S G PG
Sbjct: 671 EPGPKGEQGASGEEGEAGERGELGDI-GLPGPKGSAGNPGEPGLRGPEGSRGLPG 724



 Score = 29.6 bits (65), Expect = 3.7
 Identities = 25/77 (32%), Positives = 29/77 (37%), Gaps = 13/77 (16%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEI--------VGLPGADGLVDRAGEEQRRGAVVSSGH 52
           PG    +GD   + PP   G  GE          G PGADGL    G     G+    G 
Sbjct: 286 PGIDGIDGDRGPKGPPGPPGPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSIGSKGQKGE 345

Query: 51  PG-----GRPDRVLVSP 16
           PG     G P R +  P
Sbjct: 346 PGVPGSRGFPGRGIPGP 362



 Score = 29.3 bits (64), Expect = 4.8
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           PG M + G   ++ PP   G  G   GLPG+ G +   G     G + S G PG
Sbjct: 597 PGQMGNSGKPGQQGPPGEVGPRGP-QGLPGSRGELGPVGSPGLPGKLGSLGSPG 649



 Score = 29.3 bits (64), Expect = 4.8
 Identities = 25/66 (37%), Positives = 28/66 (42%), Gaps = 10/66 (15%)
 Frame = -1

Query: 207 PGGMRSEGDHSER-VPPCRG-------GRDGE--IVGLPGADGLVDRAGEEQRRGAVVSS 58
           PG + S+G   E  VP  RG       G  G     GLPG  G V   G+  RRG     
Sbjct: 334 PGSIGSKGQKGEPGVPGSRGFPGRGIPGPPGPPGTAGLPGELGRVGPVGDPGRRGPPGPP 393

Query: 57  GHPGGR 40
           G PG R
Sbjct: 394 GPPGPR 399



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRP 37
           PG   ++G+  +  PP   G  G + G+PG  G    AGE+   GA    G  G  G+P
Sbjct: 549 PGMPGTKGEPGKPGPPGDAGLQG-LPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGKP 606

---

>TUP1_YEAST (P16649) Glucose repression regulatory protein TUP1 (Flocculation|
           suppressor protein) (Repressor AER2)
          Length = 713

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 35/143 (24%), Positives = 51/143 (35%), Gaps = 20/143 (13%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW-------------QPDDLAVASPPAG 162
           HE  I++  + P+ D      L++GS D TVR W             +     VA  P  
Sbjct: 484 HEQDIYSLDYFPSGDK-----LVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGD 538

Query: 163 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAA-------PSEVWGVQF 321
           G  +   SL              D  +RV+D ++G  V  LD+           V+ V F
Sbjct: 539 GKYIAAGSL--------------DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVF 584

Query: 322 HPKGIXXXXXXXXXXXVKLWDTE 390
              G            VKLW+ +
Sbjct: 585 TRDG-QSVVSGSLDRSVKLWNLQ 606

---

>PRP19_CHICK (Q5ZMA2) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homolog)|
          Length = 505

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 21/86 (24%), Positives = 35/86 (40%)
 Frame = +1

Query: 76  TALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFD 255
           T  +LTG  D+ V  +      + +    GH+  V S+            S D+ IR++ 
Sbjct: 235 TNKILTGGADKNVIVFDKSSEQILAT-LKGHSKKVTSVVFHPSQDLVFSASPDATIRIWS 293

Query: 256 VDSGASVTTLDAAPSEVWGVQFHPKG 333
           V + + V  + A    V G+  H  G
Sbjct: 294 VPNASCVQVVRAHEGSVTGLSLHATG 319

---

>COEA1_HUMAN (Q05707) Collagen alpha-1(XIV) chain precursor (Undulin)|
          Length = 1796

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
 Frame = -1

Query: 207  PGGMRS---EGDHSERVPPCRGGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSGH 52
            PGG+ S   +G   +R  P + G  G       +G+PG  G+    G    +GA+   G 
Sbjct: 1538 PGGVGSPGRDGSPGQRGLPGKDGSSGPPGPPGPIGIPGTPGVPGITGSMGPQGALGPPGV 1597

Query: 51   PGGRPDR 31
            PG + +R
Sbjct: 1598 PGAKGER 1604

---

>CI112_HUMAN (Q9BTV6) WD repeat-containing protein C9orf112|
          Length = 452

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 1/95 (1%)
 Frame = +1

Query: 46  AWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXV 225
           AW+ A ++    ++ +G  D  +R W           +  H +GV S+            
Sbjct: 198 AWIAAFNYWHPEIVYSGGDDGLLRGWDTRVPGKFLFTSKRHTMGVCSIQSSPHREHILAT 257

Query: 226 -SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHP 327
            S D HI ++D  +             VW +++HP
Sbjct: 258 GSYDEHILLWDTRNMKQPLADTPVQGGVWRIKWHP 292

---

>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain|
          Length = 1049

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 20/54 (37%), Positives = 21/54 (38%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           PGG    G   ER PP  GG        PG  G     G E  +GA    G PG
Sbjct: 515 PGGKGDSGAPGERGPPGAGGP-------PGPRGGAGPPGPEGGKGAAGPPGPPG 561



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 20/56 (35%), Positives = 22/56 (39%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
           PG     G   +  PP   G  G   G PGA G +  AG    RG     G PG R
Sbjct: 758 PGSPGISGPKGDSGPPGERGAPGP-QGPPGAPGPLGIAGLTGARGLAGPPGMPGAR 812

---

>COBA1_RAT (P20909) Collagen alpha-1(XI) chain precursor (Fragment)|
          Length = 482

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 19/55 (34%), Positives = 23/55 (41%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           DPG     G   E  PP   G+ G     PGA G     GE+  +G   + G PG
Sbjct: 16  DPGQPGPPGPSGEAGPPGPPGKRGP----PGASGSEGGQGEKGAKGEAGAEGPPG 66

---

>WD51B_HUMAN (Q8TC44) WD-repeat protein 51B|
          Length = 478

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 30/122 (24%), Positives = 45/122 (36%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 201
           H+D + +  + P  +     LL + S D TVR W PD     S     H   V S+    
Sbjct: 59  HKDVVTSVQFSPHGN-----LLASASRDRTVRLWIPDKRGKFS-EFKAHTAPVRSVDFSA 112

Query: 202 XXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLW 381
                   S D  I+V+ +     + +L      V   +F P G            +K+W
Sbjct: 113 DGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDG-RLIVSCSEDKTIKIW 171

Query: 382 DT 387
           DT
Sbjct: 172 DT 173

---

>FIE_ARATH (Q9LT47) Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM|
           (Protein FERTILIZATION-INDEPENDENT SEED 3)
          Length = 369

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = +1

Query: 226 SIDSHIRVFDVDSGASVTTLDAAPS---EVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKW 396
           S D  +R+++V++G  +     A     EV  V FHP  I           +K+W  +++
Sbjct: 148 SKDESVRLWNVETGICILIFAGAGGHRYEVLSVDFHPSDIYRFASCGMDTTIKIWSMKEF 207

---

>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)|
          Length = 1336

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 19  AHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW 123
           AHE  IW+ AW P        +L +GS D T + W
Sbjct: 373 AHEGMIWSLAWHPLGH-----ILCSGSNDHTSKFW 402

---

>COHA1_MESAU (Q9JMH4) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen|
           2) (180 kDa bullous pemphigoid antigen 2)
          Length = 1431

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 12/71 (16%)
 Frame = -1

Query: 207 PGGMRSE-------GDHSERVPPCRGGRDGE-----IVGLPGADGLVDRAGEEQRRGAVV 64
           P G+R E       GD     PP   G  GE     + G PG  GL    GE   +GA+ 
Sbjct: 687 PQGLRGEVGLPGVKGDKGLAGPPGPKGDQGEKGPRGLTGEPGVRGLPGAVGEPGAKGAMG 746

Query: 63  SSGHPGGRPDR 31
            +G  G +  R
Sbjct: 747 PAGPDGQQGPR 757

---

>CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor|
          Length = 684

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -1

Query: 162 PCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           P + G+ GE  + GLPG DGL  R G    +GA    G  G
Sbjct: 67  PGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLG 107

---

>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:|
           Chondrocalcin]
          Length = 1459

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 18/56 (32%), Positives = 23/56 (41%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
           PG    +G      PP  GG+ G+  G+PG  G     G    RG     G PG +
Sbjct: 631 PGPSGFQGLPGPPGPPGEGGKQGD-QGIPGEAGAPGLVGPRGERGFPGERGSPGAQ 685

---

>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:|
           Chondrocalcin]
          Length = 1419

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 18/56 (32%), Positives = 23/56 (41%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
           PG    +G      PP  GG+ G+  G+PG  G     G    RG     G PG +
Sbjct: 591 PGPSGFQGLPGPPGPPGEGGKQGD-QGIPGEAGAPGLVGPRGERGFPGERGSPGAQ 645

---

>PK1IP_MOUSE (Q9DCE5) p21-activated protein kinase-interacting protein 1|
           (PAK1-interacting protein 1) (Putative PAK inhibitor
           Skb15)
          Length = 382

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 29/108 (26%), Positives = 39/108 (36%), Gaps = 13/108 (12%)
 Frame = +1

Query: 49  WVPAAD---HRPTALL----------LTGSIDETVRAWQPDDLAVASPPAGGHALGVVSL 189
           W P AD   H  TA L          ++GS DET+  +  D        A  H  G V+ 
Sbjct: 30  WTPVADFTHHSHTASLSVLASNSRYVVSGSKDETIHIY--DMKRKVEHGALVHHAGTVTC 87

Query: 190 XXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKG 333
                       + D HI ++DV     + T  A    V  +  HP G
Sbjct: 88  LKFHGNQHLISGAEDGHICIWDVKRWKCLKTFKAHRGHVTFLSIHPSG 135

---

>COLE_LEPMA (P98085) Inner ear-specific collagen precursor (Saccular collagen)|
          Length = 419

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
 Frame = -1

Query: 186 GDHSERVPPCRGGRDGEI--------VGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRP 37
           G   ER P    G  GE          GLPGA+GL    GE+  +G V   G PG  G+P
Sbjct: 70  GPPGERGPLGLPGEKGETGLRGPPGPAGLPGANGLNGDIGEKGDQGPVGLPGVPGIPGKP 129

---

>CO6A1_CHICK (P20785) Collagen alpha-1(VI) chain precursor|
          Length = 1019

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 5/59 (8%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           PG     GD  E  PP   GR+G +      G PG  G     G++  RG     G PG
Sbjct: 434 PGDRGPRGDLGEPGPPGDQGREGPLGPPGDQGEPGPPGPKGYRGDDGPRGNEGPKGSPG 492



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 19/55 (34%), Positives = 21/55 (38%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           DPG    +G   E     + GR G I G PG  G     GE    G     G PG
Sbjct: 361 DPGAYGPKGGKGEPGEDGKPGRQG-IPGSPGEKGAPGNRGEPGPLGETGDEGSPG 414

---

>PRP19_RAT (Q9JMJ4) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homolog) (Neuronal|
           differentiation-related gene protein)
          Length = 504

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 22/86 (25%), Positives = 35/86 (40%)
 Frame = +1

Query: 76  TALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFD 255
           T  +LTG  D+ V  +      + +    GH   V S+            S D+ IR++ 
Sbjct: 234 TNKILTGGADKNVVVFDKSTEQILAT-LKGHTKKVTSVVFHPSQELVFSASPDATIRIWS 292

Query: 256 VDSGASVTTLDAAPSEVWGVQFHPKG 333
           V + + V  + A  S V G+  H  G
Sbjct: 293 VPNTSCVQVVRAHESAVTGLSLHATG 318

---

>PRP19_MOUSE (Q99KP6) Pre-mRNA-splicing factor 19 (PRP19/PSO4 homolog) (Nuclear|
           matrix protein 200) (Nuclear matrix protein SNEV)
          Length = 504

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 22/86 (25%), Positives = 35/86 (40%)
 Frame = +1

Query: 76  TALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFD 255
           T  +LTG  D+ V  +      + +    GH   V S+            S D+ IR++ 
Sbjct: 234 TNKILTGGADKNVVVFDKSTEQILAT-LKGHTKKVTSVVFHPSQELVFSASPDATIRIWS 292

Query: 256 VDSGASVTTLDAAPSEVWGVQFHPKG 333
           V + + V  + A  S V G+  H  G
Sbjct: 293 VPNTSCVQVVRAHESAVTGLSLHATG 318

---

>PWP2_NEUCR (Q9C270) Periodic tryptophan protein 2 homolog|
          Length = 899

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 19/87 (21%), Positives = 32/87 (36%)
 Frame = +1

Query: 163 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXX 342
           GH   + SL           V+ D  I+V+D +SG  + T     S +   +F  KG   
Sbjct: 337 GHFDSMNSLVYSPDGQRIVTVADDGKIKVWDTESGFCIVTFTEHTSGITACEFSKKG-NV 395

Query: 343 XXXXXXXXXVKLWDTEKWXPIASLPVP 423
                    ++ WD  ++    +   P
Sbjct: 396 LFTSSLDGSIRAWDLIRYRNFRTFTAP 422

---

>PLRG1_RAT (Q9WUC8) Pleiotropic regulator 1|
          Length = 514

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 2/111 (1%)
 Frame = +1

Query: 88  LTGSIDETVRAWQPDDLAVASPPAG--GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 261
           +TGS D T++ W   DLA         GH   V  +              D  ++ +D++
Sbjct: 220 VTGSADRTIKIW---DLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLE 276

Query: 262 SGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWXPIASL 414
               +       S V+G+  HP  I            ++WD      + +L
Sbjct: 277 YNKVIRHYHGHLSAVYGLDLHPT-IDVLVTCSRDSTARIWDVRTKASVHTL 326

---

>PLRG1_HUMAN (O43660) Pleiotropic regulator 1|
          Length = 514

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 2/111 (1%)
 Frame = +1

Query: 88  LTGSIDETVRAWQPDDLAVASPPAG--GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 261
           +TGS D T++ W   DLA         GH   V  +              D  ++ +D++
Sbjct: 220 VTGSADRTIKIW---DLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLE 276

Query: 262 SGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWXPIASL 414
               +       S V+G+  HP  I            ++WD      + +L
Sbjct: 277 YNKVIRHYHGHLSAVYGLDLHPT-IDVLVTCSRDSTARIWDVRTKASVHTL 326

---

>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 25/70 (35%), Positives = 26/70 (37%), Gaps = 13/70 (18%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIV--------GLPGADGLVDRAGEEQRR---GAVVS 61
           PG    EG    R  P   G  G           G PGADG+    G    R   GAV  
Sbjct: 449 PGPAGEEGKRGARGEPGPAGLPGPAGERGAPGSRGFPGADGIAGPKGPPGERGSPGAVGP 508

Query: 60  SGHPG--GRP 37
            G PG  GRP
Sbjct: 509 KGSPGEAGRP 518



 Score = 28.9 bits (63), Expect = 6.3
 Identities = 19/55 (34%), Positives = 21/55 (38%)
 Frame = -1

Query: 204 GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
           G    +G   E  PP   G  G   G PGADG     G     G   + G PG R
Sbjct: 351 GSEGPQGSRGEPGPPGPAGAAGP-AGNPGADGQPGAKGATGAPGIAGAPGFPGAR 404



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
 Frame = -1

Query: 204 GGMRSEGDHSERVPPCRGGRDGEI--VGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
           G   S G   +  PP   G+DG     G PGA G     G    +GA    G PG R
Sbjct: 531 GSPGSPGPDGKTGPPGPAGQDGRPGPAGPPGARGQAGVMGFPGPKGAAGEPGKPGER 587

---

>LIN23_CAEEL (Q09990) F-box/WD-repeat protein lin-23 (Abnormal cell lineage|
           protein 23)
          Length = 665

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 19/67 (28%), Positives = 32/67 (47%)
 Frame = +1

Query: 85  LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 264
           +++G  D T++ W   D +  S    GH   V+ L            S D+ +RV+DV++
Sbjct: 235 IVSGLRDNTIKIWDRKDYS-CSRILSGHTGSVLCLQYDNRVIISG--SSDATVRVWDVET 291

Query: 265 GASVTTL 285
           G  + TL
Sbjct: 292 GECIKTL 298

---

>CO9A1_MOUSE (Q05722) Collagen alpha-1(IX) chain precursor|
          Length = 921

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           PG + S G   ++ PP   G  G   GLPG+ G V   G     G + S G PG
Sbjct: 597 PGQLGSSGKPGQQGPPGEVGPRGPR-GLPGSRGPVGPEGSPGIPGKLGSVGSPG 649



 Score = 28.5 bits (62), Expect = 8.2
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGA------VVSSGHPG 46
           PG   ++G+  +  PP   G  G + G+PG  G    AGE+   GA      + SSG PG
Sbjct: 549 PGMPGTKGEAGKPGPPGDVGLQG-LPGVPGIPGAKGVAGEKGNTGAPGKPGQLGSSGKPG 607

Query: 45  --GRPDRV 28
             G P  V
Sbjct: 608 QQGPPGEV 615

---

>COPA_HUMAN (P53621) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)|
           (HEPCOP) (HEP-COP) [Contains: Xenin (Xenopsin-related
           peptide); Proxenin]
          Length = 1224

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 1/91 (1%)
 Frame = +1

Query: 58  AADHRPTALLLTGSIDETVRAWQPDDL-AVASPPAGGHALGVVSLXXXXXXXXXXXVSID 234
           AA H    L+++G+ D  V+ W+ ++  A       GH   V               S D
Sbjct: 211 AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSED 270

Query: 235 SHIRVFDVDSGASVTTLDAAPSEVWGVQFHP 327
             IRV+D+     V T        W +  HP
Sbjct: 271 KSIRVWDMSKRTGVQTFRRDHDRFWVLAAHP 301

---

>COPA_BOVIN (Q27954) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)|
           (HEPCOP) (HEP-COP) [Contains: Xenin (Xenopsin-related
           peptide); Proxenin]
          Length = 1224

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 1/91 (1%)
 Frame = +1

Query: 58  AADHRPTALLLTGSIDETVRAWQPDDL-AVASPPAGGHALGVVSLXXXXXXXXXXXVSID 234
           AA H    L+++G+ D  V+ W+ ++  A       GH   V               S D
Sbjct: 211 AAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHYNNVSCAVFHPRQELILSNSED 270

Query: 235 SHIRVFDVDSGASVTTLDAAPSEVWGVQFHP 327
             IRV+D+     V T        W +  HP
Sbjct: 271 KSIRVWDMSKRTGVQTFRRDHDRFWVLAAHP 301

---

>COLQ_HUMAN (Q9Y215) Acetylcholinesterase collagenic tail peptide precursor|
           (AChE Q subunit) (Acetylcholinesterase-associated
           collagen)
          Length = 456

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGE--IVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
           PG    +G+  E   P R GR G   + G+PG  G     G    +G +   G PG R
Sbjct: 113 PGKTGPKGEKGELGRPGRKGRPGPPGVPGMPGPIGWPGPEGPRGEKGDLGMMGLPGSR 170

---

>GBLP_BRANA (Q39336) Guanine nucleotide-binding protein beta subunit-like|
           protein
          Length = 327

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 28/127 (22%), Positives = 49/127 (38%), Gaps = 3/127 (2%)
 Frame = +1

Query: 49  WVPAADHRPTAL---LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXX 219
           WV      P  L   +++ S D+TV+ W   +  + S  A GH   V ++          
Sbjct: 152 WVSCVRFSPNTLQPTIVSASCDKTVKVWNLSNCKLRSTLA-GHTGYVSTVAVSPDGSLCA 210

Query: 220 XVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWX 399
               D  + ++D+  G  + +L+ A S +  + F P              +K+WD E   
Sbjct: 211 SGGKDGVVLLWDLAEGKKLYSLE-ANSVIHALCFTPN--RYWLCAATEQGIKIWDLESKT 267

Query: 400 PIASLPV 420
            +  L V
Sbjct: 268 VVEDLKV 274

---

>LEUNG_ARATH (Q9FUY2) Transcriptional corepressor LEUNIG|
          Length = 931

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
 Frame = +1

Query: 85  LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXX-XXXXXXXXVSIDSHIRVFDVD 261
           L T S D+TVR W  D+   +     GH+  V SL               D+ IR + ++
Sbjct: 708 LATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSIN 767

Query: 262 SGASVTTLDAAPSEVWGVQFHPK 330
           +G+         ++   ++F P+
Sbjct: 768 NGSCTRVYKGGSTQ---IRFQPR 787

---

>CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor|
          Length = 1372

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIV-----GLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           PG   S G    R P    GR GE       GLPG+ G V  +G+E   G     G PG
Sbjct: 426 PGNRGSTGPAGIRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPSGKEGPVGLPGIDGRPG 484

---

>PEX7_PICPA (O59894) Peroxisomal targeting signal 2 receptor (PTS2 receptor)|
           (Peroxin-7)
          Length = 376

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 18/34 (52%), Positives = 19/34 (55%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAW 123
           HE +I   AW P   H PT LL T S D TVR W
Sbjct: 280 HEFAIRKLAWSP---HGPTQLL-TCSYDMTVRVW 309

---

>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor|
          Length = 1466

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 19/54 (35%), Positives = 21/54 (38%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           PGG    G   ER PP        + G PG  G     G E  +GA    G PG
Sbjct: 671 PGGKGDAGAPGERGPP-------GLAGAPGLRGGAGPPGPEGGKGAAGPPGPPG 717

---

>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor|
          Length = 1356

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = -1

Query: 189  EGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
            EG+     PP R G  G     G PG+ G +  +G+    G   S+G PG R
Sbjct: 921  EGNSGNDGPPGRPGAAGFKGDRGEPGSPGALGSSGQPGPNGPAGSAGRPGNR 972

---

>STTP1_RAT (Q496Z0) Stat3-interacting protein (StIP1)|
          Length = 821

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
 Frame = +1

Query: 4   KSVDGAHEDSIWAAAWVPA-----ADHRPTALLLTGSIDETVRAWQPDDLA------VAS 150
           ++V   HE+ + A  W P+       H+P  LL + S+D+T+  W PD+ +      V  
Sbjct: 275 ETVLAGHENWVNAIHWQPSFYKDGVLHQPVRLL-SASMDKTMILWAPDEESGVWLEQVRV 333

Query: 151 PPAGGHALG 177
              GG+ LG
Sbjct: 334 GEVGGNTLG 342

---

>CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor|
          Length = 1759

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 21/55 (38%), Positives = 24/55 (43%)
 Frame = -1

Query: 210 DPGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           D G M S+G   +R  P   G  G    L G DGL    GEE   G   + G PG
Sbjct: 83  DFGDMGSKGARGDRGLPGSPGHPG----LQGLDGLPGLKGEEGIPGCNGTDGFPG 133

---

>WDR34_MOUSE (Q5U4F6) WD-repeat protein 34|
          Length = 535

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 27/126 (21%), Positives = 40/126 (31%), Gaps = 28/126 (22%)
 Frame = +1

Query: 13  DGAHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ--------------------PD 132
           D  H D ++   W+P   H     +L+ + D  V  W+                    P 
Sbjct: 261 DDTHTDPVYQVLWLPEPRHSHRFQVLSAATDGKVLLWRGSGAGQLRLTKGFALAVQQLPR 320

Query: 133 DLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSG--------ASVTTLD 288
              +  PP G   +GV S+            S DS + V   + G        + V  L 
Sbjct: 321 STKLKKPPRGETEVGVTSVAFS---------SFDSSLFVLGTEGGFPLKCSLASEVAALT 371

Query: 289 AAPSEV 306
             PS V
Sbjct: 372 RMPSSV 377

---

>CO4A3_BOVIN (Q28084) Collagen alpha-3(IV) chain (Fragment)|
          Length = 471

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDG--EIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           PG     G    + PP   G  G  +I+ LPG+ G    AGE   +G     G PG
Sbjct: 127 PGPPGPPGQSGPKGPPGVRGEPGTVKIISLPGSPGPPGSAGEPGMQGEPGPPGPPG 182

---

>COPB2_YEAST (P41811) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)|
          Length = 889

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +1

Query: 226 SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTE 390
           S D  IRVF+ ++G  V   +A P  +  +  HP              VKLW+ E
Sbjct: 74  SDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWE 127

---

>TUP1_KLULA (P56094) Transcriptional repressor TUP1|
          Length = 682

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 23/90 (25%), Positives = 40/90 (44%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXX 201
           HE  I++  + P+ +      L++GS D TVR W       +   +    +  V++    
Sbjct: 447 HEQDIYSLDYFPSGNK-----LVSGSGDRTVRIWDLTTGTCSLTLSIEDGVTTVAVSPGE 501

Query: 202 XXXXXXXVSIDSHIRVFDVDSGASVTTLDA 291
                   S+D  +RV+D D+G  V  LD+
Sbjct: 502 GKFIAAG-SLDRTVRVWDSDTGFLVERLDS 530

---

>PLAP_HUMAN (Q9Y263) Phospholipase A-2-activating protein (PLAP) (PLA2P)|
          Length = 738

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ 126
           H  ++WA   +P        L+LTGS D+TV+ W+
Sbjct: 93  HTAAVWAVKILPEQ-----GLMLTGSADKTVKLWK 122

---

>MIAA_CAUCR (Q9A6J5) tRNA delta(2)-isopentenylpyrophosphate transferase (EC|
           2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPTase) (IPPT)
          Length = 295

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -2

Query: 101 IEPVRSSAVGRWSAAGTQAAAQIESS*APS 12
           ++P    +VGRW  A TQA A+I++   P+
Sbjct: 71  VDPALGWSVGRWLEAATQALAEIQARGKPA 100

---

>REC14_SCHPO (Q09150) Meiotic recombination protein rec14|
          Length = 302

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 10/57 (17%), Positives = 25/57 (43%)
 Frame = +1

Query: 163 GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKG 333
           GHA  + ++             ++  I+++D+D+   ++T       +W V ++  G
Sbjct: 227 GHAAWIFAVAFNPVGDLLLSADVEGKIKIWDIDTMECISTQSETDGAIWAVAWYKNG 283

---

>GBB_LOLFO (P23232) Guanine nucleotide-binding protein beta subunit|
          Length = 341

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 19/83 (22%), Positives = 32/83 (38%)
 Frame = +1

Query: 85  LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 264
           ++T S D T   W  +         GGH   V+SL            + D+  ++FD+  
Sbjct: 158 IVTSSGDMTCALWNIET-GNQITSFGGHTGDVMSLSLAPDMRTFVSGACDASAKLFDIRD 216

Query: 265 GASVTTLDAAPSEVWGVQFHPKG 333
           G    T     S++  + + P G
Sbjct: 217 GICKQTFTGHESDINAITYFPNG 239

---

>YQ35_CAEEL (Q09456) Putative cuticle collagen C09G5.5|
          Length = 317

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRPD 34
           PG    +G +     P  GG  G     PG  G    AG   + GA  + G PG  G+  
Sbjct: 145 PGNPGPQGPNGNPGAPAHGGGQGP----PGPPGPAGDAGSPGQAGAPGNPGRPGQSGQRS 200

Query: 33  RVLVSPVHR 7
           R L  P  R
Sbjct: 201 RGLPGPSGR 209

---

>COEA1_CHICK (P32018) Collagen alpha-1(XIV) chain precursor (Undulin)|
          Length = 1888

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
 Frame = -1

Query: 204  GGMRSEGDHSERVPPCRGGRDGEI-----VGLPGADGLVDRAGEEQRRGAVVSSGHPGGR 40
            G    +G   +R  P + G  G       VG+PGA G+    G +  +G V + G PG +
Sbjct: 1552 GSPGRDGAQGQRGLPGKDGPTGPQGPPGPVGIPGAPGVPGITGSQGPQGDVGAPGAPGPK 1611

Query: 39   PDR 31
             +R
Sbjct: 1612 GER 1614

---

>WSB1_HUMAN (Q9Y6I7) WD repeat and SOCS box-containing protein 1 (WSB-1) (SOCS|
           box-containing WD protein SWiP-1)
          Length = 421

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 21/101 (20%), Positives = 35/101 (34%)
 Frame = +1

Query: 82  LLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 261
           +L++ S D+T+R W   D         GH   V S            V     + ++++D
Sbjct: 185 ILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMD 244

Query: 262 SGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWD 384
               +  L+    +V    F P G            V +WD
Sbjct: 245 KYTMIRKLEGHHHDVVACDFSPDG-ALLATASYDTRVYIWD 284

---

>WDR24_BRARE (Q7ZVL2) WD-repeat protein 24|
          Length = 779

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 16/56 (28%), Positives = 22/56 (39%)
 Frame = +1

Query: 226 SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 393
           S D  ++ FD+    SV+T       V  VQF  K             V+LWD  +
Sbjct: 134 SQDGFMKCFDLRKKESVSTFSGQSESVRDVQFSMKDYFTFAASFENGNVQLWDIRR 189

---

>FIE2_MAIZE (Q8VZY6) Polycomb group protein FIE2 (FERTILIZATION-INDEPENDENT|
           ENDOSPERM 2)
          Length = 379

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = +1

Query: 226 SIDSHIRVFDVDSGASVTTLDAAP---SEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKW 396
           S D  +R+++V +G  +     A    +EV  V FHP  I           VK+W  +++
Sbjct: 153 SKDESVRLWNVHTGICILIFAGAGGHRNEVLSVDFHPSDIERFASCGMDNTVKIWSMKEF 212

---

>COJA1_HUMAN (Q14993) Collagen alpha-1(XIX) chain precursor (Collagen alpha-1(Y)|
           chain)
          Length = 1142

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG--GRPD 34
           PG    +GD     PP   G     +G+ G  G   + G+  RRG     G PG  G P 
Sbjct: 372 PGPKGEKGDTGPPGPPALPGS----LGIQGPQGPPGKEGQRGRRGKTGPPGKPGPPGPPG 427

Query: 33  RVLVSPVHR 7
              +  +H+
Sbjct: 428 PPGIQGIHQ 436

---

>CO4A4_RABIT (P55787) Collagen alpha-4(IV) chain (Fragment)|
          Length = 623

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 19/54 (35%), Positives = 24/54 (44%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           PG   S G  S   P C GG+     G+PG +G     G+   RG +   G PG
Sbjct: 49  PGRPGSPG--SSGPPGCPGGQ-----GIPGLEGHPGEVGDPGPRGLLGDPGRPG 95

---

>RUMA_XYLFT (Q87BR3) 23S rRNA (uracil-5-)-methyltransferase rumA (EC 2.1.1.-)|
           (23S rRNA(M-5-U1939)-methyltransferase)
          Length = 443

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -1

Query: 141 GEIVGLPGADGLVDRAGEEQRRGAV 67
           GE+VG+ G  GLV+RA E  RR  +
Sbjct: 319 GEVVGVEGDIGLVERARENARRNGL 343

---

>CO8A2_MOUSE (P25318) Collagen alpha-2(VIII) chain precursor (Endothelial|
           collagen)
          Length = 699

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 24/65 (36%), Positives = 29/65 (44%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRV 28
           PG     G    + PP   G DG  VG+PGA      AG    +G V + G PG R    
Sbjct: 256 PGSRGEPGAVGPKGPP---GVDG--VGIPGA------AGVPGPQGPVGAKGEPGLRGPPG 304

Query: 27  LVSPV 13
           L+ PV
Sbjct: 305 LIGPV 309



 Score = 28.9 bits (63), Expect = 6.3
 Identities = 23/64 (35%), Positives = 26/64 (40%), Gaps = 5/64 (7%)
 Frame = -1

Query: 201 GMRSE----GDHSERVPPCRGGRDGEI-VGLPGADGLVDRAGEEQRRGAVVSSGHPGGRP 37
           G+R E    GD   R PP   G  G   + +PG  G     G    RG     G PG R 
Sbjct: 137 GLRGEPGIRGDQGLRGPPGPPGLPGPSGITVPGKPGAQGAPGPPGFRGEPGPQGEPGPRG 196

Query: 36  DRVL 25
           DR L
Sbjct: 197 DRGL 200

---

>PLAP_MOUSE (P27612) Phospholipase A-2-activating protein (PLAP)|
          Length = 646

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ 126
           H  ++WA   +P        L+LTGS D+T++ W+
Sbjct: 93  HTAAVWAVKILPEQ-----GLMLTGSADKTIKLWK 122

---

>CO9A2_MOUSE (Q07643) Collagen alpha-2(IX) chain precursor|
          Length = 688

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 19/54 (35%), Positives = 22/54 (40%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG 46
           PG +   G   E   P   G DG+    PG DGL+   GE    G     G PG
Sbjct: 55  PGKVGPPGSKGEPGKPGPDGPDGK----PGIDGLMGAKGEPGPVGTPGVKGQPG 104

---

>TAF5_MOUSE (Q8C092) Transcription initiation factor TFIID subunit 5|
           (Transcription initiation factor TFIID 100 kDa subunit)
           (TAF(II)100) (TAFII-100) (TAFII100)
          Length = 801

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 26/109 (23%), Positives = 38/109 (34%)
 Frame = +1

Query: 67  HRPTALLLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIR 246
           H  +  + TGS D TVR W   +         GH   + SL            + D  + 
Sbjct: 637 HPNSNYVATGSADRTVRLWDVLN-GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 695

Query: 247 VFDVDSGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEK 393
           ++D+  G  V  L      V  ++F   G            V+LWD  K
Sbjct: 696 LWDIGHGLMVGELKGHTDTVCSLRFSRDG-EILASGSMDNTVRLWDAVK 743

---

>YNA6_YEAST (P41318) Hypothetical 34.0 kDa Trp-Asp repeats-containing protein|
           in SIS1-MRPL2 intergenic region
          Length = 303

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 16/60 (26%), Positives = 22/60 (36%)
 Frame = +1

Query: 85  LLTGSIDETVRAWQPDDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDS 264
           L T S D T R W  DD         GH   V               S D ++R++D+ +
Sbjct: 222 LATCSADHTARVWSIDDDFKLETTLDGHQRWVWDCAFSADSAYLVTASSDHYVRLWDLST 281

---

>PSAD_HORVU (P36213) Photosystem I reaction center subunit II, chloroplast|
           precursor (Photosystem I 20 kDa subunit) (PSI-D)
          Length = 205

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = +1

Query: 43  AAWVPAADHRPTALLLTGSI--DETVRAWQPDDLAVASPPAGGHALGVV 183
           AAW P+A  RP  L +  S      + A  PD  A A+PPA     G V
Sbjct: 17  AAWSPSAKPRPATLAMPSSARGPAPLFAAAPDTPAPAAPPAEPAPAGFV 65

---

>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor|
          Length = 1355

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 21/64 (32%), Positives = 24/64 (37%)
 Frame = -1

Query: 207 PGGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPDRV 28
           PG     GD  E  P    G  G   G PG  G    AG     G   ++GH G + DR 
Sbjct: 675 PGPAGGPGDRGESGPAGPSGVAGPR-GAPGERGEAGPAGPTGFAGPPGAAGHTGAKGDRG 733

Query: 27  LVSP 16
              P
Sbjct: 734 AKGP 737

---

>RAD60_SCHPO (Q9USX3) DNA repair protein rad60|
          Length = 406

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = -2

Query: 185 ETTPSACPPAGGDATARSSGCQARTVSSIEPVRSSAVGRWSAAGTQAAAQIESS 24
           +TTP+AC   G  +   +  C  + VS +   R++A  R ++  ++AA    SS
Sbjct: 85  DTTPNACLNEGRHSPKSAISCVTQPVSPVYNTRAAANLRNNSINSEAALSTTSS 138

---

>DAN1_YEAST (P47178) Cell wall protein DAN1 precursor (Covalently-linked cell|
           wall protein 13)
          Length = 298

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 21/56 (37%), Positives = 28/56 (50%)
 Frame = -2

Query: 176 PSACPPAGGDATARSSGCQARTVSSIEPVRSSAVGRWSAAGTQAAAQIESS*APST 9
           P++   A   +T+ +S     + SS E   SSA    +AA TQA    ESS A ST
Sbjct: 122 PASTTEASSTSTSEASSAATESSSSSE---SSAETSSNAASTQATVSSESSSAAST 174

---

>Y1409_SYNY3 (P73594) Hypothetical WD-repeat protein slr1409|
          Length = 326

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTA-LLLTGSIDETVRAWQPDDLAVASPP 156
           HE  +    WV +A   P    L T S D T+R WQ D   +   P
Sbjct: 247 HEYKVVPTGWVNSAQFYPKGEWLATASDDGTIRFWQKDGQLIYELP 292

---

>PLRG1_MOUSE (Q922V4) Pleiotropic regulator 1|
          Length = 513

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 2/111 (1%)
 Frame = +1

Query: 88  LTGSIDETVRAWQPDDLAVASPPAG--GHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVD 261
           +TGS D T++ W   DLA         GH   V  +              D  ++ +D++
Sbjct: 219 VTGSADRTIKIW---DLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLE 275

Query: 262 SGASVTTLDAAPSEVWGVQFHPKGIXXXXXXXXXXXVKLWDTEKWXPIASL 414
               +       S V+G+  HP  +            ++WD      + +L
Sbjct: 276 YNKVIRHYHGHLSAVYGLDLHPT-LDVLVTCSRDSTARIWDVRTKASVHTL 325

---

>LE14B_LITER (Q40153) LEC14B protein|
          Length = 473

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 20/85 (23%), Positives = 33/85 (38%)
 Frame = +1

Query: 130 DDLAVASPPAGGHALGVVSLXXXXXXXXXXXVSIDSHIRVFDVDSGASVTTLDAAPSEVW 309
           D L  +S   GG++ GV S+            + D  I V+D+++      + A  S+V 
Sbjct: 201 DGLDFSSNDDGGYSFGVFSIKFSTDGREIVAGTSDESICVYDLEADRLSLRISAHESDVN 260

Query: 310 GVQFHPKGIXXXXXXXXXXXVKLWD 384
            V F  +              K+WD
Sbjct: 261 SVCFADESGHLIYSGSDDNLCKVWD 285

---

>APAF_BRARE (Q9I9H8) Apoptotic protease-activating factor 1 (Apaf-1)|
          Length = 1261

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +1

Query: 46   AWVPAADHRPT-ALLLTGSIDETVRAWQPDDLAVASPPA 159
            +WV      P  +LLL+ S D+T+R W+ D +  +S  A
Sbjct: 885  SWVHCVQFSPDGSLLLSSSDDQTIRLWETDRVHTSSAVA 923

---

>WDR1_HUMAN (O75083) WD-repeat protein 1 (Actin-interacting protein 1) (AIP1)|
           (NORI-1)
          Length = 605

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +1

Query: 19  AHEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQPDDLAVASP-PAGGHAL 174
           AH+  I+A +W P + H     LL+ S D+T + W     +V S  P G   L
Sbjct: 231 AHDGGIYAISWSPDSTH-----LLSASGDKTSKIWDVSVNSVVSTFPMGSTVL 278

---

>PLAP_RAT (P54319) Phospholipase A-2-activating protein (PLAP)|
          Length = 647

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 22  HEDSIWAAAWVPAADHRPTALLLTGSIDETVRAWQ 126
           H  ++WA   +P        L+LTGS D+T++ W+
Sbjct: 93  HTAAVWAVKILPEQ-----GLMLTGSADKTIKLWK 122

---

>LIS1_CAEEL (Q9NDC9) Lissencephaly-1 homolog (Pronuclear migration abnormal|
           protein 1)
          Length = 404

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +1

Query: 226 SIDSHIRVFDVDSGASVTTLDAAPSEVWGVQFHPKG 333
           S D  I+ +++++G  + TL A  + V G+ FHPKG
Sbjct: 309 SRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKG 344

---

>FCER2_HUMAN (P06734) Low affinity immunoglobulin epsilon Fc receptor|
           (Lymphocyte IgE receptor) (Fc-epsilon-RII) (BLAST-2)
           (Immunoglobulin E-binding factor) (CD23 antigen)
           [Contains: Low affinity immunoglobulin epsilon Fc
           receptor membrane-bound form; Low
          Length = 321

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
 Frame = +1

Query: 10  VDGAHED-SIWAAAWVPAADHRPTALLLTGS-------IDETVRAWQPDDLAVASPPA 159
           VDG+H D S WA     +       +++ GS        D  + AW  D LA  +PPA
Sbjct: 235 VDGSHVDYSNWAPGEPTSRSQGEDCVMMRGSGRWNDAFCDRKLGAWVCDRLATCTPPA 292

---

>CO4A1_MOUSE (P02463) Collagen alpha-1(IV) chain precursor|
          Length = 1669

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
 Frame = -1

Query: 204  GGMRSEGDHSERVPPCRGGRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPG----GRP 37
            GGM   G   E+  P          G+PG+ G+    GE+  +G    SG PG    GRP
Sbjct: 1014 GGMGLPGSPGEKGVP----------GIPGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRP 1063

---

>CO4A1_HUMAN (P02462) Collagen alpha-1(IV) chain precursor|
          Length = 1669

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 17/39 (43%), Positives = 18/39 (46%)
 Frame = -1

Query: 150 GRDGEIVGLPGADGLVDRAGEEQRRGAVVSSGHPGGRPD 34
           GRDG   GLPG  G     G +  RG     G PG R D
Sbjct: 562 GRDGH-PGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGD 599


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.133    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,632,689
Number of Sequences: 219361
Number of extensions: 896247
Number of successful extensions: 5353
Number of sequences better than 10.0: 237
Number of HSP's better than 10.0 without gapping: 3938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5204
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)

---