>RL332_ENTFA (P59627) 50S ribosomal protein L33 2|
          Length = 50

 Score = 32.3 bits (72), Expect = 0.45
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 296 AAVGADLGGSSKYSNENFEGRRGERFHVNGTCTWVSR 406
           AA+   + GS  YS    EG+RGER  +N  C + ++
Sbjct: 6   AALACSVCGSRNYSKSVSEGKRGERLEINKFCKYCNQ 42

>PLMN_BOVIN (P06868) Plasminogen precursor (EC 3.4.21.7) [Contains: Plasmin|
           heavy chain A; Activation peptide; Plasmin heavy chain
           A, short form; Plasmin light chain B]
          Length = 812

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 18/55 (32%), Positives = 22/55 (40%)
 Frame = +2

Query: 32  PEAGLRCPTAR*PRTHKGCWSIKTAGRWSWKSKSAKECVTTHLPNQLAPKMDGAE 196
           P AGL     R P   K  W   T  R  W+  + K+C  T      AP+  G E
Sbjct: 424 PNAGLTMNYCRNPDADKSPWCYTTDPRVRWEFCNLKKCSETPEQVPAAPQAPGVE 478

>NUP88_RAT (O08658) Nuclear pore complex protein Nup88 (Nucleoporin Nup88) (88|
           kDa nuclear pore complex protein) (Nucleoporin Nup84)
          Length = 742

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 115 VMEVEIR*GVCNNSPAESTSPENGWR*SARPTPGHLGERH 234
           V+ + +R G+ N SPAE+  P      S  P P HL  R+
Sbjct: 22  VVFLRLREGLKNQSPAEADKPATSTSPSCPPLPPHLPTRN 61

>ATS20_MOUSE (P59511) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 20) (ADAM-TS
            20) (ADAM-TS20)
          Length = 1906

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +2

Query: 50   CPTAR*PRTHKGCWSIKTAGRWSWKSKSAKECVTT 154
            C     PRTHK C S +     SWK+   KEC  T
Sbjct: 1452 CSHLHKPRTHKACRSGRCP---SWKANKWKECSVT 1483

>RS13_THEVO (Q97B96) 30S ribosomal protein S13P|
          Length = 171

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 24  GMNRKPGYGAQLRANLEPTKGVGRLRQQD 110
           G+  + GY    R NL+PTK +G L++ +
Sbjct: 54  GIGLRLGYAIAERLNLQPTKKIGELKEDE 82

>SAYP_DROME (Q9VWF2) Supporter of activation of yellow protein (Protein enhancer|
            of yellow 3)
          Length = 2006

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = +2

Query: 23   RDEPEAGLRCPTAR*PRTHKGCWSI--KTAGR---WSWKSKSAKECV 148
            RD PEA +RC T R  R H  C  +  +  GR   ++W+    K C+
Sbjct: 1707 RDMPEAFIRCYTCR-KRVHPSCVDMPPRMVGRVRNYNWQCAGCKCCI 1752

>SYQ_CHRVO (Q7NX86) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA|
           ligase) (GlnRS)
          Length = 560

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 7/30 (23%)
 Frame = -3

Query: 150 VTHSLADFDFHDHRPA-------VLIDQHP 82
           +THSL   +F DHRP        + I+ HP
Sbjct: 227 ITHSLCSLEFEDHRPLYDWVLDNISIEHHP 256

>OPA1_MOUSE (P58281) Dynamin-like 120 kDa protein, mitochondrial precursor|
           (Large GTP-binding protein) (LargeG)
          Length = 960

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +2

Query: 110 RWS-WKSKSAKECVTTHLPNQLAPKMDGAEARDPHPAIWAS 229
           RW  WK+++ ++CV     N+L   +   +  D HPA  AS
Sbjct: 774 RWMYWKNRTQEQCVHNETKNELEKML---KVNDEHPAYLAS 811

>CYSH_NEIMA (Q9JUD5) Phosphoadenosine phosphosulfate reductase (EC 1.8.4.8)|
           (PAPS reductase, thioredoxin dependent) (PAdoPS
           reductase) (3'-phosphoadenylylsulfate reductase) (PAPS
           sulfotransferase)
          Length = 244

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +2

Query: 104 AGRWSWKSKSAKEC 145
           AGRW W+ K++KEC
Sbjct: 227 AGRWWWEDKNSKEC 240


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,625,423
Number of Sequences: 219361
Number of extensions: 1078622
Number of successful extensions: 2823
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2822
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)