Clone Information

BLAST Search Result

Clone Name	bast48b07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	SEC13_YEAST (Q04491) Protein transport protein SEC13	78	1e-14
2	SEC13_PICPA (P53024) Protein transport protein SEC13	76	3e-14
3	SEC13_MOUSE (Q9D1M0) SEC13-related protein (SEC13-like protein 1)	71	1e-12
4	SEC13_HUMAN (P55735) SEC13-related protein (SEC13-like protein 1)	71	1e-12
5	SEH1L_HUMAN (Q96EE3) Nucleoporin SEH1-like (SEC13-like protein)	60	2e-09
6	SEH1_YEAST (P53011) Nucleoporin SEH1 (Nuclear pore protein SEH1)...	45	1e-04
7	SEH1_SCHPO (Q10099) Nuclear pore protein SEH1 homolog	44	2e-04
8	Y2124_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124	42	0.001
9	Y2800_ANASP (Q8YTC2) Hypothetical WD-repeat protein alr2800	37	0.030
10	MSI3_ARATH (O22469) WD-40 repeat protein MSI3	37	0.030
11	MSI2_ARATH (O22468) WD-40 repeat protein MSI2	36	0.039
12	WD51B_MOUSE (Q8BHD1) WD-repeat protein 51B	36	0.050
13	SPG16_HUMAN (Q8N0X2) Sperm-associated antigen 16 protein (PF20 p...	35	0.066
14	WD51B_HUMAN (Q8TC44) WD-repeat protein 51B	35	0.086
15	SPG16_MOUSE (Q8K450) Sperm-associated antigen 16 protein (PF20 p...	35	0.086
16	LIS1_RAT (P63004) Platelet-activating factor acetylhydrolase IB ...	35	0.11
17	LIS1_PANTR (Q5IS43) Platelet-activating factor acetylhydrolase I...	35	0.11
18	LIS1_MOUSE (P63005) Platelet-activating factor acetylhydrolase I...	35	0.11
19	LIS1_HUMAN (P43034) Platelet-activating factor acetylhydrolase I...	35	0.11
20	LIS1_BOVIN (P43033) Platelet-activating factor acetylhydrolase I...	35	0.11
21	WD51A_HUMAN (Q8NBT0) WD-repeat protein 51A	34	0.19
22	WD51A_BOVIN (Q2TBP4) WD-repeat protein 51A	34	0.19
23	LIS1_CAEEL (Q9NDC9) Lissencephaly-1 homolog (Pronuclear migratio...	34	0.19
24	HETE1_PODAN (Q00808) Vegetatible incompatibility protein HET-E-1	34	0.19
25	WD51B_PONPY (Q5RD06) WD-repeat protein 51B	34	0.19
26	WD51A_MOUSE (Q8JZX3) WD-repeat protein 51A	33	0.25
27	FBXW7_HUMAN (Q969H0) F-box/WD-repeat protein 7 (F-box and WD-40 ...	33	0.33
28	LIS1_MACFA (Q8HXX0) Platelet-activating factor acetylhydrolase I...	33	0.33
29	FBXW7_MOUSE (Q8VBV4) F-box/WD-repeat protein 7 (F-box and WD-40 ...	33	0.33
30	Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163	33	0.43
31	YPR4_CAEEL (Q20059) Hypothetical WD-repeat protein F35G12.4	32	0.56
32	UTP13_YEAST (Q05946) U3 small nucleolar RNA-associated protein 1...	32	0.56
33	SCON2_NEUCR (Q01277) Sulfur controller 2 (SCON2)	32	0.56
34	WDR48_PONPY (Q5RAW8) WD-repeat protein 48	32	0.95
35	WDR48_HUMAN (Q8TAF3) WD-repeat protein 48 (WD repeat endosomal p...	32	0.95
36	WDR48_MACFA (Q4R2Z6) WD-repeat protein 48	32	0.95
37	WDR48_CHICK (Q5F3K4) WD-repeat protein 48	32	0.95
38	WDR48_MOUSE (Q8BH57) WD-repeat protein 48	32	0.95
39	WDR48_BRARE (Q6PFM9) WD-repeat protein 48	31	1.2
40	YA4E_SCHPO (Q09731) Hypothetical WD-repeat protein C31A2.14 in c...	31	1.2
41	Y143_SYNY3 (P74442) Hypothetical WD-repeat protein slr0143	31	1.2
42	YCW2_YEAST (P25382) Hypothetical WD-repeat protein YCR072C	31	1.2
43	YRG5_CAEEL (Q09406) Hypothetical WD-repeat protein K06A1.5	31	1.2
44	SWD3_SCHPO (O43017) Set1 complex component swd3 (Set1C component...	31	1.2
45	TUP1_CANAL (P56093) Transcriptional repressor TUP1	30	2.1
46	DMA1_SCHPO (Q10322) Protein dma1	30	2.1
47	WDR26_MOUSE (Q8C6G8) WD-repeat protein 26	30	2.8
48	WDR26_HUMAN (Q9H7D7) WD-repeat protein 26	30	2.8
49	CDC4_CANAL (P53699) Cell division control protein 4	30	2.8
50	CORO_YEAST (Q06440) Coronin-like protein	30	2.8
51	SODC_PODAN (Q711T9) Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)	30	2.8
52	PRP46_DEBHA (Q6BU94) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-pr...	30	3.6
53	SODC_ASHGO (Q751L8) Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)	30	3.6
54	FHAB_BORPE (P12255) Filamentous hemagglutinin	29	4.7
55	WDR17_HUMAN (Q8IZU2) WD-repeat protein 17	29	4.7
56	PRP4_ARATH (O22212) U4/U6 small nuclear ribonucleoprotein PRP4-l...	29	4.7
57	NBEAL_HUMAN (Q6ZS30) Neurobeachin-like 1 (Amyotrophic lateral sc...	29	4.7
58	FBW1A_HUMAN (Q9Y297) F-box/WD-repeat protein 1A (F-box and WD-re...	29	4.7
59	TRCB_XENLA (Q91854) Beta-TrCP (Beta-transducin repeat-containing...	29	4.7
60	SODC_KLULA (Q6CPE2) Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)	29	6.2
61	PF20_CHLRE (P93107) Flagellar WD-repeat protein PF20	29	6.2
62	FYV1_MOUSE (Q9Z1T6) FYVE finger-containing phosphoinositide kina...	29	6.2
63	FYV1_HUMAN (Q9Y2I7) FYVE finger-containing phosphoinositide kina...	29	6.2
64	GRWD1_HUMAN (Q9BQ67) Glutamate-rich WD repeat-containing protein 1	29	6.2
65	CDAN1_HUMAN (Q8IWY9) Codanin-1	29	6.2
66	PTN18_HUMAN (Q99952) Tyrosine-protein phosphatase non-receptor t...	29	6.2
67	TAF5_SCHPO (O13282) Transcription initiation factor TFIID subuni...	28	8.1
68	WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC...	28	8.1
69	HIRA_HUMAN (P54198) HIRA protein (TUP1-like enhancer of split pr...	28	8.1
70	HIRA_CHICK (P79987) HIRA protein (TUP1-like enhancer of split pr...	28	8.1
71	GRWD1_MOUSE (Q810D6) Glutamate-rich WD repeat-containing protein...	28	8.1
72	SODC_NEUCR (P07509) Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)	28	8.1
73	SODC_COLGL (O94178) Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)	28	8.1
74	SODC_BOTCI (Q70Q35) Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)	28	8.1

>SEC13_YEAST (Q04491) Protein transport protein SEC13|
          Length = 297

 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 34/59 (57%), Positives = 44/59 (74%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGWAIP 449
           H +++HD+ +DYYGKRLAT SSD T+KI  + G +   +L+ TLTGH GPVWRV WA P
Sbjct: 8   HNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET--HKLIDTLTGHEGPVWRVDWAHP 64

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>SEC13_PICPA (P53024) Protein transport protein SEC13|
          Length = 289

 Score = 76.3 bits (186), Expect = 3e-14
 Identities = 34/59 (57%), Positives = 43/59 (72%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGWAIP 449
           H D++HD+ +DYYG+RLAT SSD T+KI  I G +   +LV TL GH GPVW+V WA P
Sbjct: 8   HDDLIHDAVLDYYGRRLATCSSDKTIKIFEIDGEN--QRLVETLIGHEGPVWQVAWAHP 64

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>SEC13_MOUSE (Q9D1M0) SEC13-related protein (SEC13-like protein 1)|
          Length = 321

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 32/63 (50%), Positives = 44/63 (69%)
 Frame = +3

Query: 261 IELDHKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGW 440
           ++  H+DM+HD+ +DYYG RLAT SSD +VKI ++   +    L+A L GH GPVW+V W
Sbjct: 7   VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV--RNGGQILIADLRGHEGPVWQVAW 64

Query: 441 AIP 449
           A P
Sbjct: 65  AHP 67

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>SEC13_HUMAN (P55735) SEC13-related protein (SEC13-like protein 1)|
          Length = 321

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 32/63 (50%), Positives = 44/63 (69%)
 Frame = +3

Query: 261 IELDHKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGW 440
           ++  H+DM+HD+ +DYYG RLAT SSD +VKI ++   +    L+A L GH GPVW+V W
Sbjct: 7   VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDV--RNGGQILIADLRGHEGPVWQVAW 64

Query: 441 AIP 449
           A P
Sbjct: 65  AHP 67

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>SEH1L_HUMAN (Q96EE3) Nucleoporin SEH1-like (SEC13-like protein)|
          Length = 421

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 28/66 (42%), Positives = 41/66 (62%)
 Frame = +3

Query: 252 SKKIELDHKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWR 431
           ++ I  DHKD++HD + D++G+R+AT SSD +VK+ +    S      A+   H G VWR
Sbjct: 4   ARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWD-KSESGDWHCTASWKTHSGSVWR 62

Query: 432 VGWAIP 449
           V WA P
Sbjct: 63  VTWAHP 68

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>SEH1_YEAST (P53011) Nucleoporin SEH1 (Nuclear pore protein SEH1) (SEC13|
           homolog 1)
          Length = 349

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 19/59 (32%), Positives = 32/59 (54%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGWAIP 449
           H D+VHD   D+YG+ +AT SSD  +K+  +   ++  +L  +   H   +  + WA P
Sbjct: 8   HDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASP 66

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>SEH1_SCHPO (Q10099) Nuclear pore protein SEH1 homolog|
          Length = 339

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 19/69 (27%), Positives = 38/69 (55%)
 Frame = +3

Query: 243 NMSSKKIELDHKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGP 422
           ++S+  I+ +H+D+V+D   D+YG+R+ + S+D  VK+ +    +    + +        
Sbjct: 3   DISATTIQTNHQDLVNDVTYDFYGRRMVSCSADQRVKVYDFNDDTETWAITSEWRAGDAS 62

Query: 423 VWRVGWAIP 449
           + RV WA P
Sbjct: 63  LMRVAWAHP 71

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>Y2124_ANASP (Q8YV57) Hypothetical WD-repeat protein all2124|
          Length = 1683

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 23/57 (40%), Positives = 33/57 (57%)
 Frame = +3

Query: 273  HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGWA 443
            H+D V+  +    GK LA+AS+D T+K+  I    A  +LV TL GH   VW V ++
Sbjct: 1238 HQDWVNSLSFSPDGKTLASASADKTIKLWRI----ADGKLVKTLKGHNDSVWDVNFS 1290



 Score = 36.2 bits (82), Expect = 0.039
 Identities = 21/56 (37%), Positives = 29/56 (51%)
 Frame = +3

Query: 273  HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGW 440
            H D V D      GK +A+AS D+T+K+ N  G       + T TGH G V+ V +
Sbjct: 1280 HNDSVWDVNFSSDGKAIASASRDNTIKLWNRHGIE-----LETFTGHSGGVYAVNF 1330



 Score = 31.2 bits (69), Expect = 1.2
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = +3

Query: 273  HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGWA 443
            HKD V   +I   G+ +A+ S D T+K+ +  G     +L  TL GH   V+ V ++
Sbjct: 1071 HKDGVISISISRDGQTIASGSLDKTIKLWSRDG-----RLFRTLNGHEDAVYSVSFS 1122



 Score = 29.3 bits (64), Expect = 4.7
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +3

Query: 273  HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGH 413
            H+D V+  +    G+ +A+  SD T+K+      ++   L+ T+TGH
Sbjct: 1112 HEDAVYSVSFSPDGQTIASGGSDKTIKLWQ----TSDGTLLKTITGH 1154



 Score = 28.9 bits (63), Expect = 6.2
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +3

Query: 273  HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVW 428
            H D+V+    +  G  LA+ S+D TVK+      S    L+ T +GH   V+
Sbjct: 1529 HNDLVYSVNFNPDGSMLASTSADKTVKLWR----SHDGHLLHTFSGHSNVVY 1576

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>Y2800_ANASP (Q8YTC2) Hypothetical WD-repeat protein alr2800|
          Length = 1258

 Score = 36.6 bits (83), Expect = 0.030
 Identities = 21/62 (33%), Positives = 33/62 (53%)
 Frame = +3

Query: 258  KIELDHKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVG 437
            +I L+H D V+       GK +AT S+D TVK+ NI    +  Q + TL+ H   +  + 
Sbjct: 1014 QILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNI----STGQCLKTLSEHSDKILGMA 1069

Query: 438  WA 443
            W+
Sbjct: 1070 WS 1071

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>MSI3_ARATH (O22469) WD-40 repeat protein MSI3|
          Length = 424

 Score = 36.6 bits (83), Expect = 0.030
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
 Frame = +3

Query: 264 ELDHKDMVHDSAIDYYGKR------LATASSDSTVKITNIGGASAPSQLVATLTGHYGPV 425
           ++ H+  VH+  I+Y          LATASSDSTV + ++   +AP   +  L+ H G V
Sbjct: 252 QMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAP---LHVLSKHEGEV 308

Query: 426 WRVGW 440
           ++V W
Sbjct: 309 FQVEW 313

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>MSI2_ARATH (O22468) WD-40 repeat protein MSI2|
          Length = 415

 Score = 36.2 bits (82), Expect = 0.039
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
 Frame = +3

Query: 264 ELDHKDMVHDSAIDYYGKR------LATASSDSTVKITNIGGASAPSQLVATLTGHYGPV 425
           ++ H+  VH+  ++Y          LATASSDSTV + ++   +AP   +  ++ H G V
Sbjct: 251 QMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAP---LHVMSSHEGEV 307

Query: 426 WRVGW 440
           ++V W
Sbjct: 308 FQVEW 312

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>WD51B_MOUSE (Q8BHD1) WD-repeat protein 51B|
          Length = 476

 Score = 35.8 bits (81), Expect = 0.050
 Identities = 19/44 (43%), Positives = 27/44 (61%)
 Frame = +3

Query: 312 GKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGWA 443
           G  L TASSD TVK+ ++       +L+ TL GH GPV+ V ++
Sbjct: 240 GNSLVTASSDGTVKMLDL----IEGRLIYTLQGHTGPVFTVSFS 279

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>SPG16_HUMAN (Q8N0X2) Sperm-associated antigen 16 protein (PF20 protein homolog)|
          Length = 631

 Score = 35.4 bits (80), Expect = 0.066
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGW 440
           H D + D      G +LAT+S D+TVK+ ++         + T  GH   VW   W
Sbjct: 393 HTDWLSDCCFHPSGDKLATSSGDTTVKLWDL----CTGDCILTFEGHSRAVWSCTW 444

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>WD51B_HUMAN (Q8TC44) WD-repeat protein 51B|
          Length = 478

 Score = 35.0 bits (79), Expect = 0.086
 Identities = 19/44 (43%), Positives = 27/44 (61%)
 Frame = +3

Query: 312 GKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGWA 443
           G  L TASSD T+KI ++       +L+ TL GH GPV+ V ++
Sbjct: 240 GNYLITASSDGTLKILDL----LEGRLIYTLQGHTGPVFTVSFS 279

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>SPG16_MOUSE (Q8K450) Sperm-associated antigen 16 protein (PF20 protein homolog)|
          Length = 639

 Score = 35.0 bits (79), Expect = 0.086
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGW 440
           H D +        G +LAT+S DST+K+ ++       +   TL GH   VW   W
Sbjct: 401 HTDWLSGCCFHPSGSKLATSSGDSTIKLWDLN----KGECTLTLEGHNHAVWSCTW 452

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>LIS1_RAT (P63004) Platelet-activating factor acetylhydrolase IB alpha|
           subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45
           kDa subunit) (PAF-AH alpha) (PAFAH alpha)
           (Lissencephaly-1 protein) (LIS-1)
          Length = 409

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGH 413
           H D V D + D+ GK LA+ S+D T+K+ +  G     + + T+ GH
Sbjct: 148 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQG----FECIRTMHGH 190

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>LIS1_PANTR (Q5IS43) Platelet-activating factor acetylhydrolase IB alpha|
           subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45
           kDa subunit) (PAF-AH alpha) (PAFAH alpha)
           (Lissencephaly-1 protein) (LIS-1)
          Length = 409

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGH 413
           H D V D + D+ GK LA+ S+D T+K+ +  G     + + T+ GH
Sbjct: 148 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQG----FECIRTMHGH 190

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>LIS1_MOUSE (P63005) Platelet-activating factor acetylhydrolase IB alpha|
           subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45
           kDa subunit) (PAF-AH alpha) (PAFAH alpha)
           (Lissencephaly-1 protein) (LIS-1)
          Length = 409

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGH 413
           H D V D + D+ GK LA+ S+D T+K+ +  G     + + T+ GH
Sbjct: 148 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQG----FECIRTMHGH 190

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>LIS1_HUMAN (P43034) Platelet-activating factor acetylhydrolase IB alpha|
           subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45
           kDa subunit) (PAF-AH alpha) (PAFAH alpha)
           (Lissencephaly-1 protein) (LIS-1)
          Length = 409

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGH 413
           H D V D + D+ GK LA+ S+D T+K+ +  G     + + T+ GH
Sbjct: 148 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQG----FECIRTMHGH 190

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>LIS1_BOVIN (P43033) Platelet-activating factor acetylhydrolase IB alpha|
           subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45
           kDa subunit) (PAF-AH alpha) (PAFAH alpha)
           (Lissencephaly-1 protein) (LIS-1)
          Length = 409

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGH 413
           H D V D + D+ GK LA+ S+D T+K+ +  G     + + T+ GH
Sbjct: 148 HTDSVEDISFDHSGKLLASCSADMTIKLWDFQG----FECIRTMHGH 190

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>WD51A_HUMAN (Q8NBT0) WD-repeat protein 51A|
          Length = 407

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 21/57 (36%), Positives = 30/57 (52%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGWA 443
           H   V+  +    G  L TASSDST+KI ++       +L+ TL GH GP   V ++
Sbjct: 228 HSAAVNGLSFHPSGNYLITASSDSTLKILDL----MEGRLLYTLHGHQGPATTVAFS 280

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>WD51A_BOVIN (Q2TBP4) WD-repeat protein 51A|
          Length = 407

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 21/57 (36%), Positives = 30/57 (52%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGWA 443
           H   V+  +    G  L TASSDST+KI ++       +L+ TL GH GP   V ++
Sbjct: 228 HSAAVNALSFHPSGNYLVTASSDSTLKILDL----MEGRLLYTLHGHQGPATTVAFS 280

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>LIS1_CAEEL (Q9NDC9) Lissencephaly-1 homolog (Pronuclear migration abnormal|
           protein 1)
          Length = 404

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITNIG 368
           H D V+D AID  GK+L + SSD ++K+ + G
Sbjct: 147 HTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFG 178

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>HETE1_PODAN (Q00808) Vegetatible incompatibility protein HET-E-1|
          Length = 1356

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 20/57 (35%), Positives = 28/57 (49%)
 Frame = +3

Query: 273  HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGWA 443
            H   V   A    G+R+A+ S D T+KI +    +A      TL GH G VW V ++
Sbjct: 966  HGSSVLSVAFSPDGQRVASGSGDKTIKIWD----TASGTCTQTLEGHGGSVWSVAFS 1018



 Score = 33.5 bits (75), Expect = 0.25
 Identities = 19/57 (33%), Positives = 27/57 (47%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGWA 443
           H   V   A    G+R+A+ S D T+KI +    +       TL GH G VW V ++
Sbjct: 840 HGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTG----TQTLEGHGGSVWSVAFS 892



 Score = 30.8 bits (68), Expect = 1.6
 Identities = 20/57 (35%), Positives = 28/57 (49%)
 Frame = +3

Query: 273  HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGWA 443
            H   VH  A    G+R+A+ S D T+KI +    +A      TL GH G V  V ++
Sbjct: 1134 HGGWVHSVAFSPDGQRVASGSIDGTIKIWD----AASGTCTQTLEGHGGWVQSVAFS 1186



 Score = 30.0 bits (66), Expect = 2.8
 Identities = 20/57 (35%), Positives = 28/57 (49%)
 Frame = +3

Query: 273  HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGWA 443
            H   V   A    G+R+A+ SSD T+KI +    +A      TL GH G V  V ++
Sbjct: 1176 HGGWVQSVAFSPDGQRVASGSSDKTIKIWD----TASGTCTQTLEGHGGWVQSVAFS 1228



 Score = 29.6 bits (65), Expect = 3.6
 Identities = 20/57 (35%), Positives = 28/57 (49%)
 Frame = +3

Query: 273  HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGWA 443
            H D V   A    G+R+A+ S D T+KI +    +A      TL GH G V  V ++
Sbjct: 1092 HGDSVWSVAFSPDGQRVASGSIDGTIKIWD----AASGTCTQTLEGHGGWVHSVAFS 1144



 Score = 28.5 bits (62), Expect = 8.1
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +3

Query: 312  GKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGWA 443
            G+R+A+ S D T+KI +    +       TL GH   VW V ++
Sbjct: 1063 GQRVASGSDDHTIKIWD----AVSGTCTQTLEGHGDSVWSVAFS 1102

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>WD51B_PONPY (Q5RD06) WD-repeat protein 51B|
          Length = 451

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 18/41 (43%), Positives = 26/41 (63%)
 Frame = +3

Query: 321 LATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGWA 443
           L TASSD T+KI ++       +L+ TL GH GPV+ V ++
Sbjct: 243 LVTASSDGTLKILDL----LEGRLIYTLQGHTGPVFTVSFS 279

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>WD51A_MOUSE (Q8JZX3) WD-repeat protein 51A|
          Length = 405

 Score = 33.5 bits (75), Expect = 0.25
 Identities = 21/57 (36%), Positives = 30/57 (52%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGWA 443
           H   V+  +    G  L TASSDST+KI ++       +L+ TL GH GP   V ++
Sbjct: 228 HSAAVNALSFHPSGNYLITASSDSTLKILDL----MEGRLLYTLHGHQGPATTVAFS 280

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>FBXW7_HUMAN (Q969H0) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein|
           7) (F-box protein FBX30) (hCdc4) (Archipelago homolog)
           (hAgo) (SEL-10)
          Length = 707

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 18/61 (29%), Positives = 32/61 (52%)
 Frame = +3

Query: 246 MSSKKIELDHKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPV 425
           + S K+   H D V  + + + G R+ + S D+T+K+ +    +   + + TL GH G V
Sbjct: 370 LKSPKVLKGHDDHVI-TCLQFCGNRIVSGSDDNTLKVWS----AVTGKCLRTLVGHTGGV 424

Query: 426 W 428
           W
Sbjct: 425 W 425

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>LIS1_MACFA (Q8HXX0) Platelet-activating factor acetylhydrolase IB alpha|
           subunit (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45
           kDa subunit) (PAF-AH alpha) (PAFAH alpha)
           (Lissencephaly-1 protein) (LIS-1)
          Length = 409

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGH 413
           H D V D + D+ GK L + S+D T+K+ +  G     + + T+ GH
Sbjct: 148 HTDSVQDISFDHSGKLLTSCSADMTIKLWDFQG----FECIRTMHGH 190

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>FBXW7_MOUSE (Q8VBV4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein|
           7) (F-box protein FBW7) (F-box protein Fbxw6)
           (F-box-WD40 repeat protein 6) (SEL-10)
          Length = 629

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 18/61 (29%), Positives = 32/61 (52%)
 Frame = +3

Query: 246 MSSKKIELDHKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPV 425
           + S K+   H D V  + + + G R+ + S D+T+K+ +    +   + + TL GH G V
Sbjct: 292 LKSPKVLKGHDDHVI-TCLQFCGNRIVSGSDDNTLKVWS----AVTGKCLRTLVGHTGGV 346

Query: 426 W 428
           W
Sbjct: 347 W 347

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>Y163_SYNY3 (Q55563) Hypothetical WD-repeat protein sll0163|
          Length = 1693

 Score = 32.7 bits (73), Expect = 0.43
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = +3

Query: 273  HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGWA 443
            H+ +V+ +     G  +AT S+D T ++ +  G +     VA L GH G V  V W+
Sbjct: 1546 HQSIVYQARFSPEGNLIATVSADHTARLWDRSGKT-----VAVLYGHQGLVGTVDWS 1597

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>YPR4_CAEEL (Q20059) Hypothetical WD-repeat protein F35G12.4|
          Length = 683

 Score = 32.3 bits (72), Expect = 0.56
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITNI 365
           H D V+D  +  +GK L +AS+D+TVK+ NI
Sbjct: 89  HTDWVNDMILCGHGKILISASNDTTVKVWNI 119



 Score = 29.6 bits (65), Expect = 3.6
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVW 428
           H D V    ++  G R  +A SD+T+++ +IG      + +AT   H   VW
Sbjct: 219 HTDNVRALVVNDDGTRALSAGSDATIRLWDIG----QQRCIATCIAHEEGVW 266

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>UTP13_YEAST (Q05946) U3 small nucleolar RNA-associated protein 13 (U3|
           snoRNA-associated protein 13)
          Length = 817

 Score = 32.3 bits (72), Expect = 0.56
 Identities = 21/54 (38%), Positives = 29/54 (53%)
 Frame = +3

Query: 270 DHKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWR 431
           +HK  + D +   Y K LAT+S D TVKI ++   S    ++ TL GH   V R
Sbjct: 531 NHKRGLWDVSFCQYDKLLATSSGDKTVKIWSLDTFS----VMKTLEGHTNAVQR 580

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>SCON2_NEUCR (Q01277) Sulfur controller 2 (SCON2)|
          Length = 650

 Score = 32.3 bits (72), Expect = 0.56
 Identities = 16/54 (29%), Positives = 30/54 (55%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRV 434
           H D V+ + +D   + + +AS D+T+K+ ++       Q++ T  GH G V +V
Sbjct: 412 HSDWVNSTHVDIKSRTVFSASDDTTIKLWDLD----TRQVIRTYEGHVGHVQQV 461

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>WDR48_PONPY (Q5RAW8) WD-repeat protein 48|
          Length = 677

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITN 362
           H D V+D  +   GK L +ASSD+TVK+ N
Sbjct: 74  HTDWVNDIVLCCNGKTLISASSDTTVKVWN 103

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>WDR48_HUMAN (Q8TAF3) WD-repeat protein 48 (WD repeat endosomal protein) (p80)|
          Length = 677

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITN 362
           H D V+D  +   GK L +ASSD+TVK+ N
Sbjct: 74  HTDWVNDIVLCCNGKTLISASSDTTVKVWN 103

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>WDR48_MACFA (Q4R2Z6) WD-repeat protein 48|
          Length = 622

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITN 362
           H D V+D  +   GK L +ASSD+TVK+ N
Sbjct: 74  HTDWVNDIVLCCNGKTLISASSDTTVKVWN 103

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>WDR48_CHICK (Q5F3K4) WD-repeat protein 48|
          Length = 678

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITN 362
           H D V+D  +   GK L +ASSD+TVK+ N
Sbjct: 74  HTDWVNDIVLCCNGKTLISASSDTTVKVWN 103

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>WDR48_MOUSE (Q8BH57) WD-repeat protein 48|
          Length = 676

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITN 362
           H D V+D  +   GK L +ASSD+TVK+ N
Sbjct: 74  HTDWVNDVVLCCNGKTLISASSDTTVKVWN 103

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>WDR48_BRARE (Q6PFM9) WD-repeat protein 48|
          Length = 677

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITN 362
           H D V+D  +   GK L +ASSD+TVK+ N
Sbjct: 74  HTDWVNDIILCCNGKTLISASSDTTVKVWN 103

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>YA4E_SCHPO (Q09731) Hypothetical WD-repeat protein C31A2.14 in chromosome I|
          Length = 962

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = +3

Query: 246 MSSKKIE--LDHKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYG 419
           +S K+I   + H D V D  I   G+ + TASSD+T+K+ ++         +A    H  
Sbjct: 204 VSKKRITDLVGHTDNVRDILISDDGRTILTASSDATIKLWSLRAQKCLFSFIA----HSD 259

Query: 420 PVW 428
            VW
Sbjct: 260 SVW 262

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>Y143_SYNY3 (P74442) Hypothetical WD-repeat protein slr0143|
          Length = 1191

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +3

Query: 312 GKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGWA 443
           GK  ATA  D TVKI ++ G      L+ TL GH   V+ V ++
Sbjct: 613 GKIFATAGQDQTVKIWDLDG-----NLLQTLKGHQDSVYSVSFS 651

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>YCW2_YEAST (P25382) Hypothetical WD-repeat protein YCR072C|
          Length = 515

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 14/57 (24%), Positives = 31/57 (54%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGWA 443
           H+ +V+  A    G+ + +AS D+++K+ +        + ++T  GH   V++V W+
Sbjct: 401 HQKLVNHVAFSPDGRYIVSASFDNSIKLWD----GRDGKFISTFRGHVASVYQVAWS 453

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>YRG5_CAEEL (Q09406) Hypothetical WD-repeat protein K06A1.5|
          Length = 464

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
 Frame = +3

Query: 237 DANMSSKKIELD-HKDMVHDSAIDYYGK-RLATASSDSTVKITNIGGASAPSQLVATLTG 410
           D   S  K +L  H   VHD  +++      ATA SDS V+I  +      +  V+TL+G
Sbjct: 161 DVLPSEVKFKLSTHDGEVHD--VEWMSDDTFATAGSDSKVQIWRVSPNKTDASKVSTLSG 218

Query: 411 HYGPVWRVGW 440
             GPV R+ +
Sbjct: 219 CLGPVNRLDY 228

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>SWD3_SCHPO (O43017) Set1 complex component swd3 (Set1C component swd3)|
           (COMPASS component swd3) (Complex proteins associated
           with set1 protein swd3)
          Length = 380

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = +3

Query: 321 LATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGWA 443
           +AT+SSD T+KI +    +   +L  TL GHY  + +V WA
Sbjct: 69  IATSSSDGTIKIWS----ALTFRLECTLFGHYRGISQVKWA 105

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>TUP1_CANAL (P56093) Transcriptional repressor TUP1|
          Length = 514

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGAS-APSQLVATLTGH 413
           H+D V+  A    G+++A+ S D TVK+ ++ G S   S    T  GH
Sbjct: 388 HEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGH 435

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>DMA1_SCHPO (Q10322) Protein dma1|
          Length = 267

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = +2

Query: 296 CH*LLWEAPCHSFLGLHCEDHQHWRCICPVPARCHPHWPLWSCMACWMGH 445
           C  L+   PC +     C    H++CI P     HP+   +SC  C   H
Sbjct: 193 CICLMPVLPCQALFVAPCSHSYHYKCIRPTLNESHPY---FSCFICRKYH 239

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>WDR26_MOUSE (Q8C6G8) WD-repeat protein 26|
          Length = 514

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 19/64 (29%), Positives = 32/64 (50%)
 Frame = +3

Query: 252 SKKIELDHKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWR 431
           +++I  +H + V        G +LAT S D+TV I  +   +   +L+ TL GH   V  
Sbjct: 200 TQQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSY 259

Query: 432 VGWA 443
           + W+
Sbjct: 260 IAWS 263

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>WDR26_HUMAN (Q9H7D7) WD-repeat protein 26|
          Length = 514

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 19/64 (29%), Positives = 32/64 (50%)
 Frame = +3

Query: 252 SKKIELDHKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWR 431
           +++I  +H + V        G +LAT S D+TV I  +   +   +L+ TL GH   V  
Sbjct: 200 TQQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSY 259

Query: 432 VGWA 443
           + W+
Sbjct: 260 IAWS 263

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>CDC4_CANAL (P53699) Cell division control protein 4|
          Length = 684

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGH 413
           H D V+ +AID++ K   + S DS + + N        +L   L GH
Sbjct: 520 HLDRVYSTAIDFHSKTCFSGSMDSNINVWNF----ETGELKKVLVGH 562

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>CORO_YEAST (Q06440) Coronin-like protein|
          Length = 651

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +3

Query: 261 IELDHKDMVHDSAIDYYGKRLATASSDSTVKITNI 365
           I L H DMV   +  Y G  LAT + D  +++ NI
Sbjct: 177 ITLKHPDMVTSMSFSYDGNYLATVARDKKLRVWNI 211

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>SODC_PODAN (Q711T9) Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)|
          Length = 153

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -1

Query: 443 GPSNTPYRTIVASEGGNELGRGRCTSNVGDLHSGVRGSCG 324
           GP +   RT+V   G ++LG+G    ++   ++G R +CG
Sbjct: 108 GPESVIGRTVVVHAGTDDLGKGDTEESLKTGNAGARPACG 147

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>PRP46_DEBHA (Q6BU94) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing|
           protein 46)
          Length = 417

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +3

Query: 273 HKDMVHDSAID-YYGKRLATASSDSTVKITNIGGASAPSQLVATLTGH 413
           H+  V    +D    K   T SSDST+KI ++    A   L AT+TGH
Sbjct: 120 HQGWVRSCTVDPVTNKWFVTGSSDSTIKIWDL----ASLNLKATITGH 163

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>SODC_ASHGO (Q751L8) Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)|
          Length = 153

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = -1

Query: 443 GPSNTPYRTIVASEGGNELGRGRCTSNVGDLHSGVRGSCG 324
           GP++   RT+V   G ++LGRG    ++   ++G R +CG
Sbjct: 108 GPTSILGRTVVVHAGKDDLGRGGNEESLKTGNAGPRPACG 147

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>FHAB_BORPE (P12255) Filamentous hemagglutinin|
          Length = 3590

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 309 YGKRLATASSDSTVKITNIGGASAPSQLVATLTG 410
           YGK +   SSDS + +  +G  S+PS +  +  G
Sbjct: 297 YGKHITLVSSDSGLGVRQLGSLSSPSAITVSSQG 330

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>WDR17_HUMAN (Q8IZU2) WD-repeat protein 17|
          Length = 1322

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +3

Query: 321 LATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGWA 443
           LATAS D T+K+ +I   +A    V T  G+ G ++ + WA
Sbjct: 409 LATASFDGTIKVWDINTLTA----VYTSPGNEGVIYSLSWA 445

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>PRP4_ARATH (O22212) U4/U6 small nuclear ribonucleoprotein PRP4-like protein|
          Length = 554

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = +3

Query: 270 DHKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGW 440
           DHK+   D         LATAS+D T K+    G      L+ T  GH   + RV +
Sbjct: 296 DHKERATDVVFSPVDDCLATASADRTAKLWKTDGT-----LLQTFEGHLDRLARVAF 347

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>NBEAL_HUMAN (Q6ZS30) Neurobeachin-like 1 (Amyotrophic lateral sclerosis 2|
            chromosomal region candidate gene 17 protein)
          Length = 1314

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
 Frame = +3

Query: 273  HKDMVHDSAIDYYGKRLATASSDSTV---KITNIGG-----ASAPSQLVATLTGHYGPVW 428
            H D+V   A DY G  L + S D+T    +IT  GG     AS P Q+   L GH   V 
Sbjct: 1081 HMDIVTCLATDYCGIHLISGSRDTTCMIWQITQQGGVPVGLASKPFQI---LYGHTNEVL 1137

Query: 429  RVG 437
             VG
Sbjct: 1138 SVG 1140

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>FBW1A_HUMAN (Q9Y297) F-box/WD-repeat protein 1A (F-box and WD-repeats protein|
           beta-TrCP) (E3RSIkappaB) (pIkappaBalpha-E3 receptor
           subunit)
          Length = 605

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 15/57 (26%), Positives = 33/57 (57%)
 Frame = +3

Query: 243 NMSSKKIELDHKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGH 413
           +++ +++ + H+  V+   +D+  K + +AS D T+K+ N    ++  + V TL GH
Sbjct: 415 DITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWN----TSTCEFVRTLNGH 465

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>TRCB_XENLA (Q91854) Beta-TrCP (Beta-transducin repeat-containing protein)|
          Length = 518

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 15/57 (26%), Positives = 33/57 (57%)
 Frame = +3

Query: 243 NMSSKKIELDHKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGH 413
           +++ +++ + H+  V+   +D+  K + +AS D T+K+ N    ++  + V TL GH
Sbjct: 344 DITLRRVLVGHRAAVN--VVDFDDKYIVSASGDRTIKVWN----TSTCEFVRTLNGH 394

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>SODC_KLULA (Q6CPE2) Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)|
          Length = 155

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -1

Query: 443 GPSNTPYRTIVASEGGNELGRGRCTSNVGDLHSGVRGSCG 324
           GP +   RT+V   G ++LG+G    ++   ++G R +CG
Sbjct: 109 GPLSIVGRTVVVHAGQDDLGKGGDAESLKTGNAGARHACG 148

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>PF20_CHLRE (P93107) Flagellar WD-repeat protein PF20|
          Length = 606

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKI 356
           H D V+D A   +   LATASSD TV +
Sbjct: 451 HVDSVNDLAWQPFSSSLATASSDKTVSV 478

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>FYV1_MOUSE (Q9Z1T6) FYVE finger-containing phosphoinositide kinase (EC|
           2.7.1.68) (1-phosphatidylinositol-4-phosphate 5-kinase)
           (PIP5K) (PtdIns(4)P-5-kinase) (PIKfyve) (p235)
          Length = 2052

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +2

Query: 308 LWEAPCHSFLGLHCEDHQHWRCICPVPARCHPHWPLWSCMACWM 439
           LW+  CH   G+  +DH++W        R HP+  +   +  W+
Sbjct: 369 LWKKICHHTSGMEFQDHRYW-------LRTHPNCIVGKELVNWL 405

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>FYV1_HUMAN (Q9Y2I7) FYVE finger-containing phosphoinositide kinase (EC|
           2.7.1.68) (1-phosphatidylinositol-4-phosphate 5-kinase)
           (Phosphatidylinositol-3-phosphate 5-kinase type III)
           (PIP5K) (PtdIns(4)P-5-kinase) (PIKfyve) (p235)
          Length = 2098

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +2

Query: 308 LWEAPCHSFLGLHCEDHQHWRCICPVPARCHPHWPLWSCMACWM 439
           LW+  CH   G+  +DH++W        R HP+  +   +  W+
Sbjct: 358 LWKKICHHSSGMEFQDHRYW-------LRTHPNCIVGKELVNWL 394

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>GRWD1_HUMAN (Q9BQ67) Glutamate-rich WD repeat-containing protein 1|
          Length = 446

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 12/40 (30%), Positives = 25/40 (62%)
 Frame = +3

Query: 324 ATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGWA 443
           A+ S+D++++I +I  A + + ++ T T H G V  + W+
Sbjct: 278 ASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWS 317

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>CDAN1_HUMAN (Q8IWY9) Codanin-1|
          Length = 1226

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -3

Query: 384 TGQMHLQCW*SSQWSPRKLWQGASHSS 304
           TG+  L C    +W PR+LW G SHSS
Sbjct: 189 TGETQLSC---RRWVPRRLW-GVSHSS 211

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>PTN18_HUMAN (Q99952) Tyrosine-protein phosphatase non-receptor type 18 (EC|
           3.1.3.48) (Brain-derived phosphatase)
          Length = 458

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +2

Query: 167 LPRPPGRSWPSGLLPSSEGQSLA*RQHVVEEDRARPQGHGS 289
           +PRPPG    S  +P S G ++A   +  E+ R  P G GS
Sbjct: 329 IPRPPGGVLRSISVPGSPGHAMA-DTYAEEQKRGAPAGAGS 368

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>TAF5_SCHPO (O13282) Transcription initiation factor TFIID subunit 5|
           (Transcription initiation factor TFIID 72 kDa subunit)
           (TAFII-72)
          Length = 643

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 15/58 (25%), Positives = 27/58 (46%)
 Frame = +3

Query: 267 LDHKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGW 440
           L H   V+ +      K L + S D++ ++ ++   +A    +    GH GPVW V +
Sbjct: 376 LSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTA----LVAYKGHTGPVWDVAF 429

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>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)|
          Length = 1336

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +3

Query: 240 ANMSSKKIELDHKDMVHDSAIDYYGKRLATASSDSTVKI 356
           +NM++ K+   HK+ + +++      + AT S D TV+I
Sbjct: 190 SNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRI 228

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>HIRA_HUMAN (P54198) HIRA protein (TUP1-like enhancer of split protein 1)|
          Length = 1017

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 21/57 (36%), Positives = 29/57 (50%)
 Frame = +3

Query: 270 DHKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGW 440
           +H   V D A   +   LA+ S D+TV I N   A    +++ATL GH G V  + W
Sbjct: 129 NHSGDVMDVAWSPHDAWLASCSVDNTVVIWN---AVKFPEILATLRGHSGLVKGLTW 182

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>HIRA_CHICK (P79987) HIRA protein (TUP1-like enhancer of split protein 1)|
           (CHIRA)
          Length = 1018

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 21/56 (37%), Positives = 28/56 (50%)
 Frame = +3

Query: 273 HKDMVHDSAIDYYGKRLATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGW 440
           H   V D A   +   LA+ S D+TV I N   A    +++ATL GH G V  + W
Sbjct: 129 HSGDVMDVAWSPHDAWLASCSVDNTVVIWN--AAVKFPEILATLKGHSGLVKGLTW 182

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>GRWD1_MOUSE (Q810D6) Glutamate-rich WD repeat-containing protein 1 (Protein|
           A301)
          Length = 446

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = +3

Query: 324 ATASSDSTVKITNIGGASAPSQLVATLTGHYGPVWRVGWA 443
           A+ S+D++++I +I  A   + ++ T T H G V  + W+
Sbjct: 278 ASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWS 317

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>SODC_NEUCR (P07509) Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)|
          Length = 153

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -1

Query: 443 GPSNTPYRTIVASEGGNELGRGRCTSNVGDLHSGVRGSCG 324
           GP +   RT+V   G ++LG+G    ++   ++G R +CG
Sbjct: 108 GPESVIGRTVVVHAGTDDLGKGGNEESLKTGNAGPRPACG 147

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>SODC_COLGL (O94178) Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)|
          Length = 153

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -1

Query: 443 GPSNTPYRTIVASEGGNELGRGRCTSNVGDLHSGVRGSCG 324
           GP +   RTIV   G ++LG+G    ++   ++G R +CG
Sbjct: 108 GPESVIGRTIVVHGGTDDLGKGDNEESLKTGNAGPRPACG 147

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>SODC_BOTCI (Q70Q35) Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)|
          Length = 153

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -1

Query: 443 GPSNTPYRTIVASEGGNELGRGRCTSNVGDLHSGVRGSCG 324
           GP +   RT+V   G ++LG+G    +    ++G R +CG
Sbjct: 108 GPLSVIGRTVVVHSGTDDLGKGENEESKKTGNAGTRPACG 147


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,872,567
Number of Sequences: 219361
Number of extensions: 1099618
Number of successful extensions: 3640
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 3375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3630
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result