Clone Information

BLAST Search Result

Clone Name	bast48b06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CR...	35	0.057
2	CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CR...	35	0.057
3	SEPP1_BOVIN (P49907) Selenoprotein P-like protein precursor	34	0.097
4	AFLR_ASPPA (P43651) Aflatoxin biosynthesis regulatory protein	33	0.17
5	AFLR_ASPFL (P41765) Aflatoxin biosynthesis regulatory protein	33	0.17
6	DLL_DROME (P20009) Homeotic protein distal-less (Protein brista)	33	0.17
7	FOXL2_HUMAN (P58012) Forkhead box protein L2	32	0.28
8	PO3F3_HUMAN (P20264) POU domain, class 3, transcription factor 3...	32	0.48
9	BCD_DROME (P09081) Homeotic protein bicoid (PRD-4)	31	0.82
10	OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)	30	1.4
11	FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3	30	1.4
12	RBL1_MOUSE (Q64701) Retinoblastoma-like protein 1 (107 kDa retin...	30	1.4
13	UHPT_CHLPN (Q9Z7N9) Probable hexose phosphate transport protein	30	1.4
14	NOTC4_HUMAN (Q99466) Neurogenic locus notch homolog protein 4 pr...	30	1.8
15	NBL1_HUMAN (P41271) Neuroblastoma suppressor of tumorigenicity 1...	30	1.8
16	FOXL2_MOUSE (O88470) Forkhead box protein L2 (Pituitary forkhead...	30	1.8
17	ZIC5_HUMAN (Q96T25) Zinc finger protein ZIC 5 (Zinc finger prote...	30	1.8
18	YH17_YEAST (P38898) Hypothetical 17.1 kDa protein in PUR5 3'region	30	1.8
19	HD_MOUSE (P42859) Huntingtin (Huntington disease protein homolog...	29	2.4
20	PHLA1_HUMAN (Q8WV24) Pleckstrin homology-like domain family A me...	29	2.4
21	ACRO_RABIT (P48038) Acrosin precursor (EC 3.4.21.10) [Contains: ...	29	2.4
22	RBL1_HUMAN (P28749) Retinoblastoma-like protein 1 (107 kDa retin...	29	2.4
23	SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains prote...	29	3.1
24	SOX1_MOUSE (P53783) SOX-1 protein	29	3.1
25	SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains pro...	29	3.1
26	SOX1_HUMAN (O00570) SOX-1 protein	29	3.1
27	PRP3_RAT (P04474) Acidic proline-rich protein PRP33 precursor (P...	28	4.1
28	PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein	28	4.1
29	YNM4_YEAST (P53919) Hypothetical 54.9 kDa protein in SPC98-TOM70...	28	4.1
30	PO3F3_MOUSE (P31361) POU domain, class 3, transcription factor 3...	28	4.1
31	PO3F3_RAT (Q63262) POU domain, class 3, transcription factor 3 (...	28	4.1
32	YAAX_ECOLI (P75616) Hypothetical protein yaaX precursor	28	5.3
33	GRISA_PODAN (Q92258) GRISEA protein (MAC1 homolog)	28	5.3
34	NBL1_MOUSE (Q61477) Neuroblastoma suppressor of tumorigenicity 1...	28	5.3
35	PRIO_CHICK (P27177) Major prion protein homolog precursor (PR-LP...	28	6.9
36	K10_DROME (P13468) DNA-binding protein K10 (Female sterile prote...	28	6.9
37	SGP1_THIRO (P56623) Sulfur globule protein TR0 (Fragment)	28	6.9
38	PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)	28	6.9
39	PROP1_THEGE (Q3LU41) Homeobox protein prophet of Pit-1 (PROP-1) ...	28	6.9
40	PROP1_HUMAN (O75360) Homeobox protein prophet of Pit-1 (PROP-1) ...	28	6.9
41	JHD2C_MOUSE (Q69ZK6) Probable JmjC domain-containing histone dem...	28	6.9
42	HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor	28	6.9
43	ARNT_DROME (O15945) Aryl hydrocarbon receptor nuclear translocat...	28	6.9
44	RSP1_SCHPO (O13601) DnaJ-related protein rsp1	28	6.9
45	PROP1_GORGO (Q3LU39) Homeobox protein prophet of Pit-1 (PROP-1) ...	28	6.9
46	TEST_MOUSE (Q9JHJ7) Testisin precursor (EC 3.4.21.-) (Tryptase 4)	28	6.9
47	FOXGA_HUMAN (P55316) Forkhead box protein G1A (Forkhead-related ...	27	9.1
48	AMEL_MONDO (Q28462) Amelogenin	27	9.1
49	FA44A_HUMAN (Q8NFC6) Protein FAM44A	27	9.1
50	ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 ...	27	9.1
51	PHLA1_MOUSE (Q62392) Pleckstrin homology-like domain family A me...	27	9.1

>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)|
          Length = 508

 Score = 34.7 bits (78), Expect = 0.057
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
 Frame = +2

Query: 14  HQRHDSPPQSPFPHPRTHP---QNPKPHH 91
           HQ    PP  P+PH   HP    +P+PHH
Sbjct: 279 HQHQTLPPHHPYPHQHQHPAHHPHPQPHH 307

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>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)|
           (Fragment)
          Length = 353

 Score = 34.7 bits (78), Expect = 0.057
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
 Frame = +2

Query: 14  HQRHDSPPQSPFPHPRTHP---QNPKPHH 91
           HQ    PP  P+PH   HP    +P+PHH
Sbjct: 124 HQHQTLPPHHPYPHQHQHPAHHPHPQPHH 152

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>SEPP1_BOVIN (P49907) Selenoprotein P-like protein precursor|
          Length = 402

 Score = 33.9 bits (76), Expect = 0.097
 Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = +2

Query: 23  HDSPPQSPFPHPRTHPQ-NPKPHHG 94
           H  P   P PHP  HP  +P PHHG
Sbjct: 206 HPHPHSHPHPHPHPHPHPHPHPHHG 230

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>AFLR_ASPPA (P43651) Aflatoxin biosynthesis regulatory protein|
          Length = 444

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 2   PTGNHQRHDSPPQSPFPHPRTHPQNPKPHHGGAVPD 109
           P  + Q H      P PHP++HPQ+ +P H    P+
Sbjct: 102 PHAHTQAHTHAHSHPQPHPQSHPQSNQPPHALPTPN 137

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>AFLR_ASPFL (P41765) Aflatoxin biosynthesis regulatory protein|
          Length = 437

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 2   PTGNHQRHDSPPQSPFPHPRTHPQNPKPHHGGAVPD 109
           P  + Q H      P PHP++HPQ+ +P H    P+
Sbjct: 102 PHAHTQAHTHAHSHPQPHPQSHPQSNQPPHALPTPN 137

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>DLL_DROME (P20009) Homeotic protein distal-less (Protein brista)|
          Length = 327

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 4/28 (14%)
 Frame = +2

Query: 35  PQSPFP----HPRTHPQNPKPHHGGAVP 106
           PQ P P    HP+TH  NP P  GG VP
Sbjct: 281 PQPPHPAATLHPQTHHHNPPPQMGGYVP 308

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>FOXL2_HUMAN (P58012) Forkhead box protein L2|
          Length = 376

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 7/32 (21%)
 Frame = +2

Query: 32  PPQSPFPHPRTH-------PQNPKPHHGGAVP 106
           PP  P PHP  H       P    PHHG A P
Sbjct: 286 PPPHPHPHPHAHHLHAAAAPPPAPPHHGAAAP 317

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>PO3F3_HUMAN (P20264) POU domain, class 3, transcription factor 3|
           (Brain-specific homeobox/POU domain protein 1) (Brain-1)
           (Brn-1 protein)
          Length = 500

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +2

Query: 11  NHQRHDSPPQSPFPHPRTHPQNPKPHHGG 97
           +H  H + P  P PH   H Q P PHHGG
Sbjct: 272 HHHHHHAHPHPPHPH---HAQGP-PHHGG 296

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>BCD_DROME (P09081) Homeotic protein bicoid (PRD-4)|
          Length = 494

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
 Frame = +2

Query: 2   PTGNHQRHDSPPQSPFPHPRTHP---QNPKPHH 91
           P  N   H  P     PHP +HP    +P PHH
Sbjct: 6   PDQNFYHHPLPHTHTHPHPHSHPHPHSHPHPHH 38

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>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)|
          Length = 2716

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 32   PPQSPFPHPRTHPQNPKPH 88
            PP    PHP  HPQ+  PH
Sbjct: 1727 PPSHQHPHPHQHPQHQHPH 1745

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>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3|
          Length = 623

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 20  RHDSPPQSPFPHPRTHPQNPKPH 88
           +H   PQ P PHP+ H Q   PH
Sbjct: 393 QHPQRPQHPAPHPQQHSQLQPPH 415

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>RBL1_MOUSE (Q64701) Retinoblastoma-like protein 1 (107 kDa|
            retinoblastoma-associated protein) (PRB1) (P107)
          Length = 1063

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 11/36 (30%)
 Frame = +2

Query: 26   DSPPQSPFPHPRTHPQNPK-----------PHHGGA 100
            D+PP SPFPH +  P +P+           PH  GA
Sbjct: 954  DAPPLSPFPHIKQQPGSPRRISQQHSLYVSPHKNGA 989

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>UHPT_CHLPN (Q9Z7N9) Probable hexose phosphate transport protein|
          Length = 455

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -1

Query: 90  WWGLGFWGWVRGWGNGLCGGLS*RW 16
           WWGL   GW +GWG   C  L   W
Sbjct: 127 WWGLN--GWFQGWGWPPCARLLTHW 149

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>NOTC4_HUMAN (Q99466) Neurogenic locus notch homolog protein 4 precursor (Notch 4)|
            (hNotch4) [Contains: Notch 4 extracellular truncation;
            Notch 4 intracellular domain]
          Length = 2003

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +2

Query: 2    PTGNHQRHDSPPQSPFPHPRTHPQNPKPHHGGAVP 106
            P   H+        PFP  RT   +  PH GGA+P
Sbjct: 1825 PEARHKATPGREAGPFPRARTVSVSVPPHGGGALP 1859

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>NBL1_HUMAN (P41271) Neuroblastoma suppressor of tumorigenicity 1 precursor|
           (Zinc finger protein DAN) (N03)
          Length = 180

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 13/31 (41%), Positives = 14/31 (45%)
 Frame = +2

Query: 17  QRHDSPPQSPFPHPRTHPQNPKPHHGGAVPD 109
           Q  D P   P  HP  HP    PH GG  P+
Sbjct: 136 QGEDGPGSQPGTHPHPHPH---PHPGGQTPE 163

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>FOXL2_MOUSE (O88470) Forkhead box protein L2 (Pituitary forkhead factor)|
           (P-Frk)
          Length = 375

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 11/36 (30%)
 Frame = +2

Query: 32  PPQSPFPHPRTHPQ-----------NPKPHHGGAVP 106
           PP  P PHP  HP               PHHG A P
Sbjct: 281 PPPPPPPHPHPHPHAHHLHAAAAPPPAPPHHGAAAP 316

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>ZIC5_HUMAN (Q96T25) Zinc finger protein ZIC 5 (Zinc finger protein of the|
           cerebellum 5)
          Length = 639

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = +2

Query: 8   GNHQRHDSPPQSPFPHPRT--HPQNPKPHHGGA 100
           G H +H +PP +P P P    HP    PH  GA
Sbjct: 324 GPHLQHHAPPPAPPPPPAPAQHPHQHHPHLPGA 356

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>YH17_YEAST (P38898) Hypothetical 17.1 kDa protein in PUR5 3'region|
          Length = 153

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
 Frame = +2

Query: 5   TGNHQRHDSPPQSPFPHPRT-HPQ---NPKPHH 91
           T  H    +P  +P PHP T HP     P PHH
Sbjct: 32  TPTHTHPHTPTPTPHPHPHTPHPHTTPTPTPHH 64



 Score = 28.1 bits (61), Expect = 5.3
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +2

Query: 14  HQRHDSPPQSPFPHPRTHPQNPKPH 88
           H    + P +P P P  HP  P PH
Sbjct: 31  HTPTHTHPHTPTPTPHPHPHTPHPH 55

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>HD_MOUSE (P42859) Huntingtin (Huntington disease protein homolog) (HD|
           protein)
          Length = 3119

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 17  QRHDSPPQSPFPHPRTHPQNPKPHHGGAVP 106
           Q+   PPQ+P P P   PQ P+P   G  P
Sbjct: 21  QQQQPPPQAPPPPPPPPPQPPQPPPQGQPP 50

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>PHLA1_HUMAN (Q8WV24) Pleckstrin homology-like domain family A member 1 (T-cell|
           death-associated gene 51 protein) (Apoptosis-associated
           nuclear protein) (Proline- and histidine-rich protein)
           (Proline- and glutamine-rich protein) (PQ-rich protein)
          Length = 259

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = +2

Query: 23  HDSPPQSPFPHPRTHP-QNPKPH 88
           H  P   P PHP  HP Q P PH
Sbjct: 217 HSHPHSHPHPHPHPHPHQIPHPH 239

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>ACRO_RABIT (P48038) Acrosin precursor (EC 3.4.21.10) [Contains: Acrosin light|
           chain; Acrosin heavy chain]
          Length = 431

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
 Frame = +2

Query: 2   PTGNHQRHDSPPQS-PFPHPRTHPQNPKPHHGGAVP 106
           P    Q    PP   P PHP  HP+ P+P    A P
Sbjct: 318 PPWYFQHASGPPHPHPHPHPHPHPRPPQPPAAQAPP 353

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>RBL1_HUMAN (P28749) Retinoblastoma-like protein 1 (107 kDa|
            retinoblastoma-associated protein) (PRB1) (P107)
          Length = 1068

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 26   DSPPQSPFPHPRTHPQNPK 82
            D+PP SPFPH +  P +P+
Sbjct: 959  DAPPLSPFPHIKQQPGSPR 977

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>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon)
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2167

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +2

Query: 11   NHQRHDSPPQSPFPHPRTHPQNPKPHHGGAVPD 109
            +H  H +PP  P  H   HP +P     G  PD
Sbjct: 1010 HHHHHHAPPPQPH-HHHAHPPHPPEMETGGSPD 1041

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>SOX1_MOUSE (P53783) SOX-1 protein|
          Length = 391

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = +2

Query: 35  PQSPFPH-PRTHPQNPKPHH 91
           P  P PH P  HP NP+P H
Sbjct: 228 PAHPHPHHPHAHPHNPQPMH 247



 Score = 28.9 bits (63), Expect = 3.1
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 53  HPRTHPQNPKPHHGGAVP 106
           HP  HP +P PHH  A P
Sbjct: 223 HPHAHPAHPHPHHPHAHP 240

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>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2161

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +2

Query: 11   NHQRHDSPPQSPFPHPRTHPQNPKPHHGGAVPD 109
            +H  H +PP  P  H   HP +P     G  PD
Sbjct: 1002 HHHHHHAPPPQPH-HHHAHPPHPPEMETGGSPD 1033

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>SOX1_HUMAN (O00570) SOX-1 protein|
          Length = 387

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = +2

Query: 35  PQSPFPH-PRTHPQNPKPHH 91
           P  P PH P  HP NP+P H
Sbjct: 228 PAHPHPHHPHAHPHNPQPMH 247

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>PRP3_RAT (P04474) Acidic proline-rich protein PRP33 precursor (Proline-rich|
           proteoglycan 1)
          Length = 206

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 7/37 (18%)
 Frame = +2

Query: 8   GNHQR-----HDSPPQSPFPHPRTHPQNPK--PHHGG 97
           GNHQR     H  PP S  P   + P NP+  P  GG
Sbjct: 85  GNHQRPPPGHHHGPPPSGGPQTSSQPGNPQGPPPQGG 121

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>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein|
          Length = 346

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
 Frame = +2

Query: 5   TGNHQRHDSPPQSPFPHPRTHPQNP---KPHHGGAVP 106
           T  H  H  PP +P  HP+  PQ P     HHG   P
Sbjct: 68  TPKHPPHVKPPSTP-KHPKHPPQKPCPPPSHHGPKPP 103

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>YNM4_YEAST (P53919) Hypothetical 54.9 kDa protein in SPC98-TOM70 intergenic|
           region
          Length = 492

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = +2

Query: 32  PPQSPFPHPRTHPQNPKPHHGGAVP 106
           PP SPFP P T+ Q P P  G A P
Sbjct: 372 PPYSPFPQP-TNFQYPPPPFGQATP 395

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>PO3F3_MOUSE (P31361) POU domain, class 3, transcription factor 3|
           (Brain-specific homeobox/POU domain protein 1) (Brain-1)
           (Brn-1 protein)
          Length = 495

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 11  NHQRHDSPPQSPFPHPRTHPQNPKPHHGG 97
           +H  H + P  P PH   H Q P  HHGG
Sbjct: 269 HHHHHHAHPHPPHPH---HAQGPP-HHGG 293

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>PO3F3_RAT (Q63262) POU domain, class 3, transcription factor 3|
           (Brain-specific homeobox/POU domain protein 1) (Brain-1)
           (Brn-1 protein)
          Length = 497

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 11  NHQRHDSPPQSPFPHPRTHPQNPKPHHGG 97
           +H  H + P  P PH   H Q P  HHGG
Sbjct: 271 HHHHHHAHPHPPHPH---HAQGPP-HHGG 295

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>YAAX_ECOLI (P75616) Hypothetical protein yaaX precursor|
          Length = 98

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = +2

Query: 8   GNHQRHDSPPQSPFPHPRTHPQNPKPHHGGAVP 106
           GN      PP    P PR H + P  HHGG  P
Sbjct: 65  GNRWHLHGPP----PPPRHHKKAPHDHHGGHGP 93

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>GRISA_PODAN (Q92258) GRISEA protein (MAC1 homolog)|
          Length = 597

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
 Frame = +2

Query: 2   PTGNHQRHDSPPQSPFPHPRTH---PQNPKPHHGGAVP 106
           P G +     PP  P PH   H   PQ+ K  +GG VP
Sbjct: 182 PMGYNMPPSMPPHMPPPHYPPHIQIPQHIKTENGGFVP 219

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>NBL1_MOUSE (Q61477) Neuroblastoma suppressor of tumorigenicity 1 precursor|
           (Zinc finger protein DAN) (N03)
          Length = 178

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/31 (41%), Positives = 14/31 (45%)
 Frame = +2

Query: 17  QRHDSPPQSPFPHPRTHPQNPKPHHGGAVPD 109
           Q  DSP   P PH   H     PH GG  P+
Sbjct: 136 QGEDSPGSQPGPHSHAH-----PHPGGQTPE 161

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>PRIO_CHICK (P27177) Major prion protein homolog precursor (PR-LP)|
           (Acetylcholine receptor-inducing activity) (ARIA) (65-21
           protein)
          Length = 273

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +2

Query: 8   GNHQRHDSPPQSPFPHPRTHPQNP-KPHHGG 97
           G+H++   P Q  +PH   +P NP  PH+ G
Sbjct: 39  GSHRQPSYPRQPGYPHNPGYPHNPGYPHNPG 69

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>K10_DROME (P13468) DNA-binding protein K10 (Female sterile protein K10)|
          Length = 463

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = +2

Query: 2   PTGNHQRHDSP--PQSPFPHPRTHPQNPKPHH 91
           P+ N Q+H SP   Q P P+ + HP + +  H
Sbjct: 139 PSPNQQQHPSPNQQQHPSPNQQQHPNSNQQQH 170

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>SGP1_THIRO (P56623) Sulfur globule protein TR0 (Fragment)|
          Length = 40

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 90 WWGLGFWGWVRGWGNGL 40
          WWG G+ G+  G+G+GL
Sbjct: 1  WWGPGYGGYGPGYGSGL 17

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>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)|
          Length = 815

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 6/31 (19%)
 Frame = +2

Query: 32  PPQSPF----PHPR--THPQNPKPHHGGAVP 106
           PPQ P     PHP    HP +P  H GG  P
Sbjct: 568 PPQQPSHLGPPHPNMMNHPHHPHHHPGGPPP 598



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 10/35 (28%)
 Frame = +2

Query: 32  PPQSPFPHPRTHPQNP----------KPHHGGAVP 106
           PP  P  HP  HP +P           PH GG  P
Sbjct: 152 PPPPPHMHPHMHPHHPGGPMGHPHGPHPHMGGPPP 186

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>PROP1_THEGE (Q3LU41) Homeobox protein prophet of Pit-1 (PROP-1)|
           (Pituitary-specific homeodomain factor)
          Length = 226

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 32  PPQSPFPHPRTHPQNPKPHHGGA 100
           PP + FPHP +H    +P  GGA
Sbjct: 162 PPVTCFPHPYSHALPSQPSTGGA 184

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>PROP1_HUMAN (O75360) Homeobox protein prophet of Pit-1 (PROP-1)|
           (Pituitary-specific homeodomain factor)
          Length = 226

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 32  PPQSPFPHPRTHPQNPKPHHGGA 100
           PP + FPHP +H    +P  GGA
Sbjct: 162 PPVTCFPHPYSHALPSQPSTGGA 184

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>JHD2C_MOUSE (Q69ZK6) Probable JmjC domain-containing histone demethylation|
           protein 2C (EC 1.14.11.-) (Jumonji domain-containing
           protein 1C)
          Length = 2350

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +2

Query: 8   GNHQRHDSPPQSPFPHPRTHPQNPKPHH 91
           G H    S  Q+P P   THP    PHH
Sbjct: 580 GPHLLAGSTSQTPLPTINTHPLTSGPHH 607

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>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor|
          Length = 351

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +2

Query: 2   PTGNHQRHDSPPQSPFPHPRTHPQNPKPHH 91
           P  +H+ H        PHP  H  +  PHH
Sbjct: 82  PEEHHEPHHEEHHHHHPHPHHHHHHHPPHH 111

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>ARNT_DROME (O15945) Aryl hydrocarbon receptor nuclear translocator homolog|
           (dARNT) (Protein tango) (Hypoxia-inducible factor 1
           beta)
          Length = 644

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 50  PHPRTHPQNPKPHHGG 97
           PHP  HP +P  H GG
Sbjct: 590 PHPTAHPHHPHAHPGG 605

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>RSP1_SCHPO (O13601) DnaJ-related protein rsp1|
          Length = 494

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = +2

Query: 14  HQRHDSP--PQSPFPHPRTHPQNPKP 85
           H  ++SP  P+ PF HP + P  PKP
Sbjct: 295 HSDNNSPSKPEIPFRHPTSKPLPPKP 320

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>PROP1_GORGO (Q3LU39) Homeobox protein prophet of Pit-1 (PROP-1)|
           (Pituitary-specific homeodomain factor)
          Length = 225

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 32  PPQSPFPHPRTHPQNPKPHHGGA 100
           PP + FPHP +H    +P  GGA
Sbjct: 161 PPVTCFPHPYSHALPSQPSTGGA 183

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>TEST_MOUSE (Q9JHJ7) Testisin precursor (EC 3.4.21.-) (Tryptase 4)|
          Length = 324

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 5/27 (18%)
 Frame = -1

Query: 81  LGFWGW---VRGWGNGLCGG--LS*RW 16
           LG W W   +R WGN LCG   L+ RW
Sbjct: 63  LGRWPWQGSLRVWGNHLCGATLLNRRW 89

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>FOXGA_HUMAN (P55316) Forkhead box protein G1A (Forkhead-related protein FKHL2)|
           (Transcription factor BF-2) (Brain factor 2) (BF2)
           (HFK2)
          Length = 469

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +2

Query: 11  NHQRHDSPPQSPFPHPRTHPQNPKP 85
           +H  H  PP +P P P    Q P P
Sbjct: 52  HHHHHHPPPPAPQPPPPPQQQQPPP 76

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>AMEL_MONDO (Q28462) Amelogenin|
          Length = 202

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = +2

Query: 29  SPPQSP-FPHPRTHPQNPKPHHGGAVP 106
           +PPQ P  P P  HP  P  HH   +P
Sbjct: 79  APPQQPVMPVPGQHPMAPTQHHQPNLP 105

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>FA44A_HUMAN (Q8NFC6) Protein FAM44A|
          Length = 502

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = +2

Query: 11  NHQRHDSPPQSPFPHPRTHPQNPKPHHG-GAVP 106
           N Q    PP  P P P+  PQ P P  G GA P
Sbjct: 4   NPQPQPPPPAPPPPPPQPQPQPPPPPPGPGAGP 36

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>ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 homolog (hnRNP|
           A1) (Helix-destabilizing protein) (Single-strand binding
           protein) (hnRNP core protein A1)
          Length = 365

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 90  WWGLGFWGWVRGWGNGLCGG 31
           WW     GW RG+G G  GG
Sbjct: 247 WWQPSLLGWNRGYGAGQGGG 266

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>PHLA1_MOUSE (Q62392) Pleckstrin homology-like domain family A member 1 (T-cell|
           death-associated gene 51 protein) (Proline- and
           glutamine-rich protein) (PQR protein)
          Length = 261

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +2

Query: 17  QRHDSPPQSPFPHPRTHP-QNPKPH 88
           Q H  P   P PHP +HP Q+P PH
Sbjct: 201 QLHSYP--HPHPHPYSHPHQHPHPH 223


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.312    0.121    0.455 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,273,179
Number of Sequences: 219361
Number of extensions: 246825
Number of successful extensions: 1925
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1863
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result