ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast48b03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X15869.1|HVNADPHP Barley mRNA for NADPH-protochlorophyllide ... 821 0.0
2emb|X76532.1|TAPWR5PI Triticum aestivium pWR5 RNA for protochlor... 551 e-154
3emb|X17067.1|ASPCR Avena sativa mRNA for protochlorophyllide red... 159 9e-36
4ref|XM_474360.1| Oryza sativa (japonica cultivar-group), predic... 153 6e-34
5emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4,... 153 6e-34
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 153 6e-34
7dbj|AK104855.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 6e-34
8dbj|AK103940.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 6e-34
9dbj|AK065236.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 6e-34
10emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 153 6e-34
11emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 153 6e-34
12dbj|AK103943.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 1e-31
13ref|NM_197169.1| Oryza sativa (japonica cultivar-group) putative... 131 2e-27
14gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 gen... 131 2e-27
15dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
16dbj|AK068143.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
17gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 131 2e-27
18emb|AJ567760.1|ZMA567760 Zea mays partial mRNA for NADPH-protoch... 92 2e-15
19emb|X84738.1|HVNADPHPO H.vulgare mRNA for NADPH-protochlorophyll... 90 7e-15
20gb|AY103784.1| Zea mays PCO066646 mRNA sequence 78 3e-11
21gb|AY862405.1| Musa acuminata NADPH-protochlorophyllide oxidored... 70 7e-09
22gb|CP000316.1| Polaromonas sp. JS666, complete genome 48 0.024
23gb|AF223646.1| Uncultured bacterium plasmid pAH115 esterase gene... 44 0.37
24ref|XM_957279.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.5
25ref|XM_326192.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.5
26gb|AC124697.3| Mus musculus BAC clone RP24-177N20 from chromosom... 42 1.5
27gb|AE005920.1| Caulobacter crescentus CB15 section 246 of 359 of... 42 1.5
28gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 42 1.5
29gb|AE005001.1| Halobacterium sp. NRC-1 section 32 of 170 of the ... 42 1.5
30emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 42 1.5
31gb|AY260760.3| Streptomyces hygroscopicus subsp. yingchengensis ... 42 1.5
32ref|XM_479797.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
33gb|AC121363.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
34gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
35gb|AC162446.2| Mus musculus chromosome 8, clone RP23-410L16, com... 40 5.8
36gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 5.8
37gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 5.8
38gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosom... 40 5.8
39gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 5.8
40ref|XM_982866.1| PREDICTED: Mus musculus microtubule associated ... 40 5.8
41ref|XM_888290.2| PREDICTED: Mus musculus microtubule associated ... 40 5.8
42ref|XM_979773.1| PREDICTED: Mus musculus microtubule associated ... 40 5.8
43emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 5.8
44gb|AC126798.3| Mus musculus BAC clone RP24-229N7 from chromosome... 40 5.8
45gb|AC098882.3| Mus musculus BAC clone RP23-122D13 from 12, compl... 40 5.8
46emb|CR666827.2|CNS0FDHT Tetraodon nigroviridis full-length cDNA 40 5.8
47gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 5.8
48gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 5.8
49emb|X99258.1|MTMOB M.tuberculosis genomic sequence containing 4 ... 40 5.8
50emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome... 40 5.8
51emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 5.8
52emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete ... 40 5.8
53emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete ... 40 5.8
54gb|AF498106.1| Aedes aegypti relish R7 isoform mRNA, complete cd... 40 5.8
55gb|AF498105.1| Aedes aegypti relish R6 isoform mRNA, complete cd... 40 5.8
56gb|AC159211.2| Mus musculus BAC clone RP23-33F21 from chromosome... 40 5.8
57gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 5.8
58dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 5.8
59gb|AE011995.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 5.8
60gb|AE012533.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 5.8
61gb|AE012453.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 5.8
62dbj|AK140821.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 5.8
63gb|AC091729.4| Homo sapiens BAC clone RP13-580H13 from 7, comple... 40 5.8
64gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.8
65gb|DQ384244.1| Olyra latifolia tasselseed2-like short-chain dehy... 40 5.8
66gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 5.8
67dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
68dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
69dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
70gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 5.8
71gb|AC068547.7| Homo sapiens BAC clone RP11-458J7 from 2, complet... 40 5.8
72gb|AE004696.1| Pseudomonas aeruginosa PAO1, section 257 of 529 o... 40 5.8
73gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.8
74dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 40 5.8
75dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.8
76dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
77dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
78dbj|AK172971.1| Mus musculus mRNA for mKIAA0561 protein 40 5.8
79gb|AE005112.1| Halobacterium sp. NRC-1 section 143 of 170 of the... 40 5.8
80dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
81emb|X80268.1|MY4547 M.tuberculosis 45/47 gene 40 5.8
82gb|AF013569.1|AF013569 Mycobacterium bovis fibronectin attachmen... 40 5.8
83gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 5.8
84dbj|AK067392.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
85gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 5.8
86gb|BC024265.1| Mus musculus microtubule associated serine/threon... 40 5.8
87gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 5.8 
>emb|X15869.1|HVNADPHP Barley mRNA for NADPH-protochlorophyllide oxidoreductase (PCR)
          Length = 1490

 Score =  821 bits (414), Expect = 0.0
 Identities = 414/414 (100%)
 Strand = Plus / Plus

                                                                       
Query: 17  gcagcacagtgcactcgagttcgagctcgttgaactcctgcagtgcagtgctagctagcg 76
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11  gcagcacagtgcactcgagttcgagctcgttgaactcctgcagtgcagtgctagctagcg 70

                                                                       
Query: 77  acagtccaagctcaccgtcatccatggctctccagcttctcccctccaccctctccgtcc 136
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71  acagtccaagctcaccgtcatccatggctctccagcttctcccctccaccctctccgtcc 130

                                                                       
Query: 137 ccaagaagggcagcagcatgggcgcagtggcggtgaaggacacggcggcgttcctgggcg 196
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ccaagaagggcagcagcatgggcgcagtggcggtgaaggacacggcggcgttcctgggcg 190

                                                                       
Query: 197 tgagcagcaaggcgaagaaggcgtcgctggcggtgaggacgcaggtggccacggcgcctt 256
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tgagcagcaaggcgaagaaggcgtcgctggcggtgaggacgcaggtggccacggcgcctt 250

                                                                       
Query: 257 cgccggtgacgacgagcccgggctcgaccgcgtcgtcgccgagcggcaagaagacgctgc 316
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 cgccggtgacgacgagcccgggctcgaccgcgtcgtcgccgagcggcaagaagacgctgc 310

                                                                       
Query: 317 ggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctggcggcggccaagg 376
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctggcggcggccaagg 370

                                                                 
Query: 377 cgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctca 430
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 cgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctca 424
to top
>emb|X76532.1|TAPWR5PI Triticum aestivium pWR5 RNA for protochlorophyilide reductase
          Length = 1484

 Score =  551 bits (278), Expect = e-154
 Identities = 329/346 (95%)
 Strand = Plus / Plus

                                                                       
Query: 85  agctcaccgtcatccatggctctccagcttctcccctccaccctctccgtccccaagaag 144
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 58  agctcaccgtcatccatggctctccagctcctcccctccaccctctccgtccccaagaag 117

                                                                       
Query: 145 ggcagcagcatgggcgcagtggcggtgaaggacacggcggcgttcctgggcgtgagcagc 204
           || |||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 118 ggtagcagcatgggcgcggcggcagtgaaggacacggcggcgttcctgggcgtgagcagc 177

                                                                       
Query: 205 aaggcgaagaaggcgtcgctggcggtgaggacgcaggtggccacggcgccttcgccggtg 264
           |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 178 aaggcgaagaaggcgtcgctagcggtgaggacgcaggtggccacggcgccttcgtcggtg 237

                                                                       
Query: 265 acgacgagcccgggctcgaccgcgtcgtcgccgagcggcaagaagacgctgcggcagggc 324
           |||||||||||||||||| |  || ||  |||||||||||||||||||||||||||||||
Sbjct: 238 acgacgagcccgggctcggcgacggcgaagccgagcggcaagaagacgctgcggcagggc 297

                                                                       
Query: 325 gtggtggtgatcacgggcgcgtcatccgggctgggcctggcggcggccaaggcgctggcc 384
           ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| 
Sbjct: 298 gtggtggtgatcacgggcgcgtcgtccgggctgggtctggcggcggccaaggcgctggca 357

                                                         
Query: 385 gagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctca 430
           |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 358 gagacgggcaagtggcacgtggtcatggcgtgccgcgacttcctca 403
to top
>emb|X17067.1|ASPCR Avena sativa mRNA for protochlorophyllide reductase
          Length = 1146

 Score =  159 bits (80), Expect = 9e-36
 Identities = 101/108 (93%)
 Strand = Plus / Plus

                                                                       
Query: 323 gcgtggtggtgatcacgggcgcgtcatccgggctgggcctggcggcggccaaggcgctgg 382
           ||||||||||||||||||||||||| || || || ||||| |||||||||||||||||||
Sbjct: 1   gcgtggtggtgatcacgggcgcgtcgtcgggcctcggcctcgcggcggccaaggcgctgg 60

                                                           
Query: 383 ccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctca 430
           | |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 61  cggagacgggcaagtggcacgtggtcatggcgtgccgcgacttcctca 108
to top
>ref|XM_474360.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1164

 Score =  153 bits (77), Expect = 6e-34
 Identities = 113/125 (90%)
 Strand = Plus / Plus

                                                                       
Query: 304 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 363
           |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || 
Sbjct: 202 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 261

                                                                       
Query: 364 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 423
           |||||||| ||||||||||| |||||||| ||||||||||| || |||||||||||||||
Sbjct: 262 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 321

                
Query: 424 ttcct 428
           |||||
Sbjct: 322 ttcct 326
to top
>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01,
            complete sequence
          Length = 133331

 Score =  153 bits (77), Expect = 6e-34
 Identities = 113/125 (90%)
 Strand = Plus / Plus

                                                                        
Query: 304  aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 363
            |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || 
Sbjct: 4144 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 4203

                                                                        
Query: 364  gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 423
            |||||||| ||||||||||| |||||||| ||||||||||| || |||||||||||||||
Sbjct: 4204 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 4263

                 
Query: 424  ttcct 428
            |||||
Sbjct: 4264 ttcct 4268
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  153 bits (77), Expect = 6e-34
 Identities = 113/125 (90%)
 Strand = Plus / Plus

                                                                            
Query: 304      aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 363
                |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || 
Sbjct: 34698582 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 34698641

                                                                            
Query: 364      gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 423
                |||||||| ||||||||||| |||||||| ||||||||||| || |||||||||||||||
Sbjct: 34698642 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 34698701

                     
Query: 424      ttcct 428
                |||||
Sbjct: 34698702 ttcct 34698706
to top
>dbj|AK104855.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B11, full
           insert sequence
          Length = 1384

 Score =  153 bits (77), Expect = 6e-34
 Identities = 113/125 (90%)
 Strand = Plus / Plus

                                                                       
Query: 304 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 363
           |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || 
Sbjct: 274 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 333

                                                                       
Query: 364 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 423
           |||||||| ||||||||||| |||||||| ||||||||||| || |||||||||||||||
Sbjct: 334 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 393

                
Query: 424 ttcct 428
           |||||
Sbjct: 394 ttcct 398
to top
>dbj|AK103940.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G08, full
           insert sequence
          Length = 1384

 Score =  153 bits (77), Expect = 6e-34
 Identities = 113/125 (90%)
 Strand = Plus / Plus

                                                                       
Query: 304 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 363
           |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || 
Sbjct: 274 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 333

                                                                       
Query: 364 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 423
           |||||||| ||||||||||| |||||||| ||||||||||| || |||||||||||||||
Sbjct: 334 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 393

                
Query: 424 ttcct 428
           |||||
Sbjct: 394 ttcct 398
to top
>dbj|AK065236.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H23, full
           insert sequence
          Length = 1385

 Score =  153 bits (77), Expect = 6e-34
 Identities = 113/125 (90%)
 Strand = Plus / Plus

                                                                       
Query: 304 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 363
           |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || 
Sbjct: 275 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 334

                                                                       
Query: 364 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 423
           |||||||| ||||||||||| |||||||| ||||||||||| || |||||||||||||||
Sbjct: 335 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 394

                
Query: 424 ttcct 428
           |||||
Sbjct: 395 ttcct 399
to top
>emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0402C08, complete
             sequence
          Length = 100836

 Score =  153 bits (77), Expect = 6e-34
 Identities = 113/125 (90%)
 Strand = Plus / Plus

                                                                         
Query: 304   aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 363
             |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || 
Sbjct: 96506 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 96565

                                                                         
Query: 364   gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 423
             |||||||| ||||||||||| |||||||| ||||||||||| || |||||||||||||||
Sbjct: 96566 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 96625

                  
Query: 424   ttcct 428
             |||||
Sbjct: 96626 ttcct 96630
to top
>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete
             sequence
          Length = 103264

 Score =  153 bits (77), Expect = 6e-34
 Identities = 113/125 (90%)
 Strand = Plus / Plus

                                                                         
Query: 304   aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 363
             |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || 
Sbjct: 41602 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 41661

                                                                         
Query: 364   gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 423
             |||||||| ||||||||||| |||||||| ||||||||||| || |||||||||||||||
Sbjct: 41662 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 41721

                  
Query: 424   ttcct 428
             |||||
Sbjct: 41722 ttcct 41726
to top
>dbj|AK103943.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G12, full
           insert sequence
          Length = 1384

 Score =  145 bits (73), Expect = 1e-31
 Identities = 112/125 (89%)
 Strand = Plus / Plus

                                                                       
Query: 304 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 363
           |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || 
Sbjct: 274 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 333

                                                                       
Query: 364 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 423
           |||||||| ||||||||||| |||||||| ||||||||||| ||  ||||||||||||||
Sbjct: 334 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtggtggcgtgccgcgac 393

                
Query: 424 ttcct 428
           |||||
Sbjct: 394 ttcct 398
to top
>ref|NM_197169.1| Oryza sativa (japonica cultivar-group) putative dehydrogenase
           (OSJNBa0017E08.8), mRNA
          Length = 1564

 Score =  131 bits (66), Expect = 2e-27
 Identities = 114/130 (87%)
 Strand = Plus / Plus

                                                                       
Query: 301 ggcaagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggc 360
           |||||| ||||||||||  |||||  || ||| ||||| |||||||| |||||||| |||
Sbjct: 306 ggcaagcagacgctgcgcaagggcacggcggtcatcaccggcgcgtcgtccgggcttggc 365

                                                                       
Query: 361 ctggcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgc 420
           || ||| |||| ||||||||||| |||||||||| ||||||||||||||||| |||||||
Sbjct: 366 ctcgcgacggcgaaggcgctggcggagacgggcaggtggcacgtcgtcatggggtgccgc 425

                     
Query: 421 gacttcctca 430
           ||||||||||
Sbjct: 426 gacttcctca 435
to top
>gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 genomic sequence, complete
              sequence
          Length = 136120

 Score =  131 bits (66), Expect = 2e-27
 Identities = 114/130 (87%)
 Strand = Plus / Minus

                                                                          
Query: 301    ggcaagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggc 360
              |||||| ||||||||||  |||||  || ||| ||||| |||||||| |||||||| |||
Sbjct: 120731 ggcaagcagacgctgcgcaagggcacggcggtcatcaccggcgcgtcgtccgggcttggc 120672

                                                                          
Query: 361    ctggcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgc 420
              || ||| |||| ||||||||||| |||||||||| ||||||||||||||||| |||||||
Sbjct: 120671 ctcgcgacggcgaaggcgctggcggagacgggcaggtggcacgtcgtcatggggtgccgc 120612

                        
Query: 421    gacttcctca 430
              ||||||||||
Sbjct: 120611 gacttcctca 120602
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  131 bits (66), Expect = 2e-27
 Identities = 114/130 (87%)
 Strand = Plus / Plus

                                                                            
Query: 301      ggcaagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggc 360
                |||||| ||||||||||  |||||  || ||| ||||| |||||||| |||||||| |||
Sbjct: 18385962 ggcaagcagacgctgcgcaagggcacggcggtcatcaccggcgcgtcgtccgggcttggc 18386021

                                                                            
Query: 361      ctggcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgc 420
                || ||| |||| ||||||||||| |||||||||| ||||||||||||||||| |||||||
Sbjct: 18386022 ctcgcgacggcgaaggcgctggcggagacgggcaggtggcacgtcgtcatggggtgccgc 18386081

                          
Query: 421      gacttcctca 430
                ||||||||||
Sbjct: 18386082 gacttcctca 18386091
to top
>dbj|AK068143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134C06, full
            insert sequence
          Length = 2944

 Score =  131 bits (66), Expect = 2e-27
 Identities = 114/130 (87%)
 Strand = Plus / Plus

                                                                        
Query: 301  ggcaagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggc 360
            |||||| ||||||||||  |||||  || ||| ||||| |||||||| |||||||| |||
Sbjct: 1506 ggcaagcagacgctgcgcaagggcacggcggtcatcaccggcgcgtcgtccgggcttggc 1565

                                                                        
Query: 361  ctggcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgc 420
            || ||| |||| ||||||||||| |||||||||| ||||||||||||||||| |||||||
Sbjct: 1566 ctcgcgacggcgaaggcgctggcggagacgggcaggtggcacgtcgtcatggggtgccgc 1625

                      
Query: 421  gacttcctca 430
            ||||||||||
Sbjct: 1626 gacttcctca 1635
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  131 bits (66), Expect = 2e-27
 Identities = 114/130 (87%)
 Strand = Plus / Plus

                                                                            
Query: 301      ggcaagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggc 360
                |||||| ||||||||||  |||||  || ||| ||||| |||||||| |||||||| |||
Sbjct: 18396015 ggcaagcagacgctgcgcaagggcacggcggtcatcaccggcgcgtcgtccgggcttggc 18396074

                                                                            
Query: 361      ctggcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgc 420
                || ||| |||| ||||||||||| |||||||||| ||||||||||||||||| |||||||
Sbjct: 18396075 ctcgcgacggcgaaggcgctggcggagacgggcaggtggcacgtcgtcatggggtgccgc 18396134

                          
Query: 421      gacttcctca 430
                ||||||||||
Sbjct: 18396135 gacttcctca 18396144
to top
>emb|AJ567760.1|ZMA567760 Zea mays partial mRNA for NADPH-protochlorophyllide oxidoreductase
           (por gene)
          Length = 1116

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 109/130 (83%)
 Strand = Plus / Plus

                                                                       
Query: 301 ggcaagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggc 360
           ||||||||||| || ||  |||||  || ||| ||||| |||||||| ||||| || |||
Sbjct: 154 ggcaagaagaccctccgcaagggcacggcggtcatcaccggcgcgtcgtccggcctcggc 213

                                                                       
Query: 361 ctggcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgc 420
           || ||  |||| ||||| ||||| ||||| ||||||||||||||| ||||||| ||||||
Sbjct: 214 ctcgccacggcgaaggccctggcggagacaggcaagtggcacgtcatcatggcctgccgc 273

                     
Query: 421 gacttcctca 430
           ||||||||||
Sbjct: 274 gacttcctca 283
to top
>emb|X84738.1|HVNADPHPO H.vulgare mRNA for NADPH-protochlorophyllide oxidoreductase
          Length = 1345

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 84/97 (86%)
 Strand = Plus / Plus

                                                                       
Query: 334 atcacgggcgcgtcatccgggctgggcctggcggcggccaaggcgctggccgagacgggc 393
           |||||||||||||| || || || ||||| ||  |||||||||| ||||| ||| | |||
Sbjct: 313 atcacgggcgcgtcgtcgggcctcggcctcgccacggccaaggccctggcggagtcaggc 372

                                                
Query: 394 aagtggcacgtcgtcatggcgtgccgcgacttcctca 430
           |||||||||||| |||||||||||||||||| |||||
Sbjct: 373 aagtggcacgtcatcatggcgtgccgcgactacctca 409
to top
>gb|AY103784.1| Zea mays PCO066646 mRNA sequence
          Length = 1664

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Plus

                                                                       
Query: 340 ggcgcgtcatccgggctgggcctggcggcggccaaggcgctggccgagacgggcaagtgg 399
           |||||||| ||||| || ||||||||  |||| ||||| ||||| ||||| |||||||||
Sbjct: 375 ggcgcgtcgtccggcctcggcctggccacggcgaaggccctggcggagaccggcaagtgg 434

                                  
Query: 400 cacgtcgtcatggcgtgccgcga 422
           |||||| ||||||| ||||||||
Sbjct: 435 cacgtcatcatggcctgccgcga 457
to top
>gb|AY862405.1| Musa acuminata NADPH-protochlorophyllide oxidoreductase gene,
           complete cds
          Length = 1619

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 98/119 (82%)
 Strand = Plus / Plus

                                                                       
Query: 312 gctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctggcggcggc 371
           ||||||| ||||||||||||| ||||| ||||| || || || || ||||| || || ||
Sbjct: 423 gctgcggaagggcgtggtggtaatcaccggcgcctcctcgggactcggcctcgccgctgc 482

                                                                      
Query: 372 caaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctca 430
           |||||| || |||||||| |  || |||||||| |||||||| ||| | ||||||||||
Sbjct: 483 caaggctctcgccgagaccgagaaatggcacgttgtcatggcctgcagggacttcctca 541
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 362     tggcggcggccaaggcgctggccg 385
               ||||||||||||||||||||||||
Sbjct: 5142952 tggcggcggccaaggcgctggccg 5142975
to top
>gb|AF223646.1| Uncultured bacterium plasmid pAH115 esterase gene, complete cds
          Length = 2142

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 277 ggctcgaccgcgtcgtcgccga 298
           ||||||||||||||||||||||
Sbjct: 140 ggctcgaccgcgtcgtcgccga 119
to top
>ref|XM_957279.1| Neurospora crassa OR74A hypothetical protein (NCU06338.1) partial
            mRNA
          Length = 5772

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 193  ggcgtgagcagcaaggcgaagaagg 217
            ||||||||||||||||| |||||||
Sbjct: 5698 ggcgtgagcagcaaggcaaagaagg 5722
to top
>ref|XM_326192.1| Neurospora crassa OR74A hypothetical protein (NCU06338.1) partial
            mRNA
          Length = 5772

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 193  ggcgtgagcagcaaggcgaagaagg 217
            ||||||||||||||||| |||||||
Sbjct: 5698 ggcgtgagcagcaaggcaaagaagg 5722
to top
>gb|AC124697.3| Mus musculus BAC clone RP24-177N20 from chromosome 1, complete sequence
          Length = 164612

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 112   cttctcccctccaccctctcc 132
             |||||||||||||||||||||
Sbjct: 42019 cttctcccctccaccctctcc 41999
to top
>gb|AE005920.1| Caulobacter crescentus CB15 section 246 of 359 of the complete genome
          Length = 10062

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 357  gggcctggcggcggccaaggcgctg 381
            |||||||||||||| ||||||||||
Sbjct: 7333 gggcctggcggcggtcaaggcgctg 7309
to top
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 362     tggcggcggccaaggcgctggccga 386
               ||||||| |||||||||||||||||
Sbjct: 4597581 tggcggcagccaaggcgctggccga 4597605
to top
>gb|AE005001.1| Halobacterium sp. NRC-1 section 32 of 170 of the complete genome
          Length = 10670

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 399  gcacgtcgtcatggcgtgccg 419
            |||||||||||||||||||||
Sbjct: 6496 gcacgtcgtcatggcgtgccg 6476
to top
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 369     ggccaaggcgctggccgagac 389
               |||||||||||||||||||||
Sbjct: 3414909 ggccaaggcgctggccgagac 3414929
to top
>gb|AY260760.3| Streptomyces hygroscopicus subsp. yingchengensis Shy1 (shy1), CvhE
            (cvhE), CvhD (cvhD), CvhC (cvhC), CvhB (cvhB), CvhA
            (cvhA), Shy26 (shy26), Shy4 (shy4), Shy5 (shy5), Shy6
            (shy6), Shy7 (shy7), Shy8 (shy8), Shy9 (shy9), Shy10
            (shy10), Shy11 (shy11), Shy12 (shy12), Shy13 (shy13),
            Shy14 (shy14), Shy15 (shy15), Shy16 (shy16), Shy17
            (shy17), Shy18 (shy18), Hmr19 (hmr19), Shy20 (shy20),
            Shy21 (shy21), Shy22 (shy22), Shy23 (shy23), Shy24
            (shy24), and Shy25 (shy25) genes, complete cds
          Length = 36687

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 354  gctgggcctggcggcggccaa 374
            |||||||||||||||||||||
Sbjct: 2550 gctgggcctggcggcggccaa 2530
to top
>ref|XM_479797.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2387

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 199  agcagcaaggcgaagaaggcgtcgctgg 226
            |||||||||||||| |||||| ||||||
Sbjct: 1676 agcagcaaggcgaacaaggcggcgctgg 1703
to top
>gb|AC121363.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0036C12, complete sequence
          Length = 145517

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 362   tggcggcggccaaggcgctggccg 385
             ||||||||||||||||| ||||||
Sbjct: 62502 tggcggcggccaaggcggtggccg 62525
to top
>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10,
             complete sequence
          Length = 134183

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 279   ctcgaccgcgtcgtcgccga 298
             ||||||||||||||||||||
Sbjct: 50427 ctcgaccgcgtcgtcgccga 50446
to top
>gb|AC162446.2| Mus musculus chromosome 8, clone RP23-410L16, complete sequence
          Length = 197906

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    gctgcggcagggcgtggtgg 331
              ||||||||||||||||||||
Sbjct: 132507 gctgcggcagggcgtggtgg 132526
to top
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 367     gcggccaaggcgctggccga 386
               ||||||||||||||||||||
Sbjct: 2105778 gcggccaaggcgctggccga 2105797
to top
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 205     aaggcgaagaaggcgtcgctggcg 228
               |||| |||||||||||||||||||
Sbjct: 3274483 aaggggaagaaggcgtcgctggcg 3274506
to top
>gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosome 6, complete sequence
          Length = 211910

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    ctctccagcttctcccctcc 123
              ||||||||||||||||||||
Sbjct: 118208 ctctccagcttctcccctcc 118189
to top
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 397    tggcacgtcgtcatggcgtgccgc 420
              ||||||||||||||||| ||||||
Sbjct: 373356 tggcacgtcgtcatggcttgccgc 373379
to top
>ref|XM_982866.1| PREDICTED: Mus musculus microtubule associated serine/threonine
            kinase 3, transcript variant 2 (Mast3), mRNA
          Length = 4425

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 312  gctgcggcagggcgtggtgg 331
            ||||||||||||||||||||
Sbjct: 3427 gctgcggcagggcgtggtgg 3408
to top
>ref|XM_888290.2| PREDICTED: Mus musculus microtubule associated serine/threonine
            kinase 3, transcript variant 2 (Mast3), mRNA
          Length = 4425

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 312  gctgcggcagggcgtggtgg 331
            ||||||||||||||||||||
Sbjct: 3427 gctgcggcagggcgtggtgg 3408
to top
>ref|XM_979773.1| PREDICTED: Mus musculus microtubule associated serine/threonine
            kinase 3 (Mast3), mRNA
          Length = 4425

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 312  gctgcggcagggcgtggtgg 331
            ||||||||||||||||||||
Sbjct: 3427 gctgcggcagggcgtggtgg 3408
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 318     gcagggcgtggtggtgatca 337
               ||||||||||||||||||||
Sbjct: 4141015 gcagggcgtggtggtgatca 4141034
to top
>gb|AC126798.3| Mus musculus BAC clone RP24-229N7 from chromosome 1, complete sequence
          Length = 172452

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 135    ccccaagaagggcagcagca 154
              ||||||||||||||||||||
Sbjct: 124088 ccccaagaagggcagcagca 124069
to top
>gb|AC098882.3| Mus musculus BAC clone RP23-122D13 from 12, complete sequence
          Length = 223130

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     gcagtgcagtgctagctagc 75
              ||||||||||||||||||||
Sbjct: 181503 gcagtgcagtgctagctagc 181484
to top
>emb|CR666827.2|CNS0FDHT Tetraodon nigroviridis full-length cDNA
          Length = 555

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 168 ggtgaaggacacggcggcgt 187
           ||||||||||||||||||||
Sbjct: 224 ggtgaaggacacggcggcgt 205
to top
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 353     ggctgggcctggcggcggcc 372
               ||||||||||||||||||||
Sbjct: 1077017 ggctgggcctggcggcggcc 1077036
to top
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 363     ggcggcggccaaggcgctgg 382
               ||||||||||||||||||||
Sbjct: 1942139 ggcggcggccaaggcgctgg 1942158
to top
>emb|X99258.1|MTMOB M.tuberculosis genomic sequence containing 4 ORF's
          Length = 4082

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 367  gcggccaaggcgctggccga 386
            ||||||||||||||||||||
Sbjct: 3778 gcggccaaggcgctggccga 3797
to top
>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13
          Length = 346186

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   gcggccaaggcgctggccga 386
             ||||||||||||||||||||
Sbjct: 29855 gcggccaaggcgctggccga 29874
to top
>emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 7/14
          Length = 291050

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 367    gcggccaaggcgctggccga 386
              ||||||||||||||||||||
Sbjct: 184766 gcggccaaggcgctggccga 184785
to top
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29
          Length = 300100

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 361   ctggcggcggccaaggcgctggcc 384
             |||||||||||| |||||||||||
Sbjct: 40231 ctggcggcggccgaggcgctggcc 40254
to top
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29
          Length = 276800

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 354    gctgggcctggcggcggcca 373
              ||||||||||||||||||||
Sbjct: 107449 gctgggcctggcggcggcca 107468
to top
>gb|AF498106.1| Aedes aegypti relish R7 isoform mRNA, complete cds; alternatively
            spliced
          Length = 2730

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 40   agctcgttgaactcctgcag 59
            ||||||||||||||||||||
Sbjct: 1390 agctcgttgaactcctgcag 1409
to top
>gb|AF498105.1| Aedes aegypti relish R6 isoform mRNA, complete cds; alternatively
            spliced
          Length = 3280

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 40   agctcgttgaactcctgcag 59
            ||||||||||||||||||||
Sbjct: 1941 agctcgttgaactcctgcag 1960
to top
>gb|AC159211.2| Mus musculus BAC clone RP23-33F21 from chromosome 12, complete
            sequence
          Length = 201550

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   gcagtgcagtgctagctagc 75
            ||||||||||||||||||||
Sbjct: 2135 gcagtgcagtgctagctagc 2154
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 372    caaggcgctggccgagacgggcaa 395
              |||||||||||||||||| |||||
Sbjct: 171756 caaggcgctggccgagaccggcaa 171779
to top
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 318     gcagggcgtggtggtgatca 337
               ||||||||||||||||||||
Sbjct: 1108145 gcagggcgtggtggtgatca 1108126
to top
>gb|AE011995.1| Xanthomonas axonopodis pv. citri str. 306,  section 373 of 469 of the
            complete genome
          Length = 11692

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 318  gcagggcgtggtggtgatca 337
            ||||||||||||||||||||
Sbjct: 3837 gcagggcgtggtggtgatca 3856
to top
>gb|AE012533.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 441
            of 460 of the complete genome
          Length = 6066

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 364  gcggcggccaaggcgctggc 383
            ||||||||||||||||||||
Sbjct: 5752 gcggcggccaaggcgctggc 5771
to top
>gb|AE012453.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 361
            of 460 of the complete genome
          Length = 10452

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 318  gcagggcgtggtggtgatca 337
            ||||||||||||||||||||
Sbjct: 3550 gcagggcgtggtggtgatca 3569
to top
>dbj|AK140821.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130034L06 product:weakly similar to
            Sast-pending protein [Mus musculus], full insert sequence
          Length = 4263

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 312  gctgcggcagggcgtggtgg 331
            ||||||||||||||||||||
Sbjct: 3507 gctgcggcagggcgtggtgg 3488
to top
>gb|AC091729.4| Homo sapiens BAC clone RP13-580H13 from 7, complete sequence
          Length = 104285

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 108   ccagcttctcccctccaccc 127
             ||||||||||||||||||||
Sbjct: 51908 ccagcttctcccctccaccc 51927
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 203     gcaaggcgaagaaggcgtcg 222
               ||||||||||||||||||||
Sbjct: 1457481 gcaaggcgaagaaggcgtcg 1457500
to top
>gb|DQ384244.1| Olyra latifolia tasselseed2-like short-chain
           dehydrogenase/reductase gene, partial cds
          Length = 759

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 243 ggccacggcgccttcgccggtgacgacg 270
           ||||||| ||||||||||| ||||||||
Sbjct: 565 ggccacgacgccttcgccgctgacgacg 592
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 364     gcggcggccaaggcgctggc 383
               ||||||||||||||||||||
Sbjct: 4949256 gcggcggccaaggcgctggc 4949275



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 318    gcagggcgtggtggtgatca 337
              ||||||||||||||||||||
Sbjct: 978778 gcagggcgtggtggtgatca 978759
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 199    agcagcaaggcgaagaaggcgtcgctgg 226
              |||||||||||||| |||||| ||||||
Sbjct: 971854 agcagcaaggcgaacaaggcggcgctgg 971881
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 362     tggcggcggccaaggcgctggccg 385
               ||||||||||||||||| ||||||
Sbjct: 5664502 tggcggcggccaaggcggtggccg 5664479
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 362      tggcggcggccaaggcgctggccg 385
                ||||||||||||||||| ||||||
Sbjct: 16738392 tggcggcggccaaggcggtggccg 16738415



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 279      ctcgaccgcgtcgtcgccga 298
                ||||||||||||||||||||
Sbjct: 16551688 ctcgaccgcgtcgtcgccga 16551707
to top
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 251     cgccttcgccggtgacgacg 270
               ||||||||||||||||||||
Sbjct: 2286225 cgccttcgccggtgacgacg 2286244
to top
>gb|AC068547.7| Homo sapiens BAC clone RP11-458J7 from 2, complete sequence
          Length = 185555

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 105   tctccagcttctcccctccaccct 128
             ||||||||||||| ||||||||||
Sbjct: 85347 tctccagcttctctcctccaccct 85370
to top
>gb|AE004696.1| Pseudomonas aeruginosa PAO1, section 257 of 529 of the complete
            genome
          Length = 14449

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 216  ggcgtcgctggcggtgagga 235
            ||||||||||||||||||||
Sbjct: 4846 ggcgtcgctggcggtgagga 4865
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 281     cgaccgcgtcgtcgccgagc 300
               ||||||||||||||||||||
Sbjct: 1012168 cgaccgcgtcgtcgccgagc 1012187
to top
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 397     tggcacgtcgtcatggcgtgccgc 420
               ||||||||||||||||| ||||||
Sbjct: 2097905 tggcacgtcgtcatggcttgccgc 2097882
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 279     ctcgaccgcgtcgtcgccga 298
               ||||||||||||||||||||
Sbjct: 2286263 ctcgaccgcgtcgtcgccga 2286282



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 279     ctcgaccgcgtcgtcgccga 298
               ||||||||||||||||||||
Sbjct: 1600910 ctcgaccgcgtcgtcgccga 1600929
to top
>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0021C04
          Length = 162115

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 362   tggcggcggccaaggcgctggccg 385
             ||||||||||||||||| ||||||
Sbjct: 56649 tggcggcggccaaggcggtggccg 56626
to top
>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0470F10
          Length = 185294

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 199    agcagcaaggcgaagaaggcgtcgctgg 226
              |||||||||||||| |||||| ||||||
Sbjct: 134592 agcagcaaggcgaacaaggcggcgctgg 134619
to top
>dbj|AK172971.1| Mus musculus mRNA for mKIAA0561 protein
          Length = 1425

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 312 gctgcggcagggcgtggtgg 331
           ||||||||||||||||||||
Sbjct: 703 gctgcggcagggcgtggtgg 684
to top
>gb|AE005112.1| Halobacterium sp. NRC-1 section 143 of 170 of the complete genome
          Length = 12204

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 281  cgaccgcgtcgtcgccgagc 300
            ||||||||||||||||||||
Sbjct: 5711 cgaccgcgtcgtcgccgagc 5692
to top
>dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
           BAC clone:OJ1005_B05
          Length = 144799

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 199 agcagcaaggcgaagaaggcgtcgctgg 226
           |||||||||||||| |||||| ||||||
Sbjct: 381 agcagcaaggcgaacaaggcggcgctgg 408
to top
>emb|X80268.1|MY4547 M.tuberculosis 45/47 gene
          Length = 2061

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 367  gcggccaaggcgctggccga 386
            ||||||||||||||||||||
Sbjct: 1904 gcggccaaggcgctggccga 1923
to top
>gb|AF013569.1|AF013569 Mycobacterium bovis fibronectin attachment protein (FAP-B) gene,
           complete cds
          Length = 1123

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 367 gcggccaaggcgctggccga 386
           ||||||||||||||||||||
Sbjct: 901 gcggccaaggcgctggccga 920
to top
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 278     gctcgaccgcgtcgtcgccgagcg 301
               ||||||||| ||||||||||||||
Sbjct: 1756600 gctcgaccgggtcgtcgccgagcg 1756623
to top
>dbj|AK067392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104G24, full
            insert sequence
          Length = 2387

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 199  agcagcaaggcgaagaaggcgtcgctgg 226
            |||||||||||||| |||||| ||||||
Sbjct: 1676 agcagcaaggcgaacaaggcggcgctgg 1703
to top
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 318     gcagggcgtggtggtgatca 337
               ||||||||||||||||||||
Sbjct: 1141678 gcagggcgtggtggtgatca 1141659
to top
>gb|BC024265.1| Mus musculus microtubule associated serine/threonine kinase 3, mRNA
            (cDNA clone IMAGE:5137303), complete cds
          Length = 3042

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 312  gctgcggcagggcgtggtgg 331
            ||||||||||||||||||||
Sbjct: 1139 gctgcggcagggcgtggtgg 1120
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 358     ggcctggcggcggccaaggcgctg 381
               ||||||| ||||||||||||||||
Sbjct: 4462203 ggcctggtggcggccaaggcgctg 4462180


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,669,459
Number of Sequences: 3902068
Number of extensions: 3669459
Number of successful extensions: 85991
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82890
Number of HSP's gapped (non-prelim): 3100
length of query: 434
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 412
effective length of database: 17,147,199,772
effective search space: 7064646306064
effective search space used: 7064646306064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top