ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast48b01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1STUB_DROME (Q05319) Serine proteinase stubble (EC 3.4.21.-) (Pro... 28 9.2

>STUB_DROME (Q05319) Serine proteinase stubble (EC 3.4.21.-) (Protein|
           stubble-stubbloid) [Contains: Serine proteinase stubble
           non-catalytic chain; Serine proteinase stubble catalytic
           chain]
          Length = 787

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 16  TAPPQQHTPTEPKLAGGRS 72
           T PPQ H PT P+L+ G S
Sbjct: 375 THPPQPHRPTRPQLSPGTS 393


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.131    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,338,317
Number of Sequences: 219361
Number of extensions: 294683
Number of successful extensions: 1358
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1356
length of database: 80,573,946
effective HSP length: 18
effective length of database: 76,625,448
effective search space used: 1839010752
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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