| Clone Name | bast48a10 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | UNG2_HUMAN (P22674) Uracil-DNA glycosylase 2 (EC 3.2.2.-) (UDG 2) | 28 | 7.2 | 2 | CWC22_YARLI (Q6C8C5) Pre-mRNA-splicing factor CWC22 | 28 | 7.2 |
|---|
>UNG2_HUMAN (P22674) Uracil-DNA glycosylase 2 (EC 3.2.2.-) (UDG 2)| Length = 326 Score = 28.5 bits (62), Expect = 7.2 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 6/72 (8%) Frame = -1 Query: 363 LAVASFPSLTWDSHCSRRASSLHCFSLADERLPL------FFLXXXXXXXXXXXAPSYPI 202 L A P+ + +R SS HC SL++ LPL FFL PS P Sbjct: 22 LCTAPGPNPGVPAQQARSVSSFHCVSLSELFLPLSWEAPRFFL----------ALPSLPQ 71 Query: 201 LPLGGDPGSSAA 166 LPL P A+ Sbjct: 72 LPLHPKPSGPAS 83
>CWC22_YARLI (Q6C8C5) Pre-mRNA-splicing factor CWC22| Length = 954 Score = 28.5 bits (62), Expect = 7.2 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = +2 Query: 137 PRPRTHARTHAAEEPGSPPRGR 202 PR R+ +R+ + + GSPPRGR Sbjct: 828 PRSRSRSRSLSRDRTGSPPRGR 849 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,206,969 Number of Sequences: 219361 Number of extensions: 444849 Number of successful extensions: 2211 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1855 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2208 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)