ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast48a02 |
|---|---|
| Clone Library Name | barley_pub |
>ECHA6_MYCTU (P64014) Probable enoyl-CoA hydratase echA6 (EC 4.2.1.17)| Length = 243 Score = 42.4 bits (98), Expect = 3e-04 Identities = 24/59 (40%), Positives = 34/59 (57%) Frame = +2 Query: 137 AAAVYEVRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPHFCAGIELGG 313 A AV + L RP +RNAL+ E+ +A+ +ARA+VL+ G FCAG +L G Sbjct: 7 AEAVLTIELQRPERRNALNSQLVEELTQAIRKAGD-GSARAIVLTGQGTAFCAGADLSG 64
>ECHA6_MYCBO (P64015) Probable enoyl-CoA hydratase echA6 (EC 4.2.1.17)| Length = 243 Score = 42.4 bits (98), Expect = 3e-04 Identities = 24/59 (40%), Positives = 34/59 (57%) Frame = +2 Query: 137 AAAVYEVRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPHFCAGIELGG 313 A AV + L RP +RNAL+ E+ +A+ +ARA+VL+ G FCAG +L G Sbjct: 7 AEAVLTIELQRPERRNALNSQLVEELTQAIRKAGD-GSARAIVLTGQGTAFCAGADLSG 64
>ECH1_HUMAN (Q13011) Delta3,5-delta2,4-dienoyl-CoA isomerase, mitochondrial| precursor (EC 5.3.3.-) Length = 328 Score = 41.2 bits (95), Expect = 7e-04 Identities = 31/92 (33%), Positives = 46/92 (50%) Frame = +2 Query: 32 LHGRAAQMATGGGASDAEAELRRGFKALAVTRPDPAAAVYEVRLSRPAQRNALSPDSFAE 211 L G +AQ G A + +++L VT V V+L+RP +RNA++ + E Sbjct: 33 LTGSSAQEEASGVALGEAPD--HSYESLRVTSAQKH--VLHVQLNRPNKRNAMNKVFWRE 88 Query: 212 IPRAMALLDRIPAARAVVLSAAGPHFCAGIEL 307 + + R RAVV+S AG F AGI+L Sbjct: 89 MVECFNKISRDADCRAVVISGAGKMFTAGIDL 120
>ECH1_PONPY (Q5RFG0) Delta3,5-delta2,4-dienoyl-CoA isomerase, mitochondrial| precursor (EC 5.3.3.-) Length = 328 Score = 40.0 bits (92), Expect = 0.001 Identities = 30/92 (32%), Positives = 45/92 (48%) Frame = +2 Query: 32 LHGRAAQMATGGGASDAEAELRRGFKALAVTRPDPAAAVYEVRLSRPAQRNALSPDSFAE 211 L G AQ G A + +++L VT V V+L+RP +RNA++ + E Sbjct: 33 LTGSPAQEEASGVALGEAPD--HSYESLRVTSAQKH--VLHVQLNRPNKRNAMNKVFWRE 88 Query: 212 IPRAMALLDRIPAARAVVLSAAGPHFCAGIEL 307 + + R RAVV+S AG F AG++L Sbjct: 89 MVECFNKISRDADCRAVVISGAGKMFTAGVDL 120
>ECH1_RAT (Q62651) Delta3,5-delta2,4-dienoyl-CoA isomerase, mitochondrial| precursor (EC 5.3.3.-) Length = 327 Score = 38.5 bits (88), Expect = 0.004 Identities = 20/54 (37%), Positives = 32/54 (59%) Frame = +2 Query: 146 VYEVRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPHFCAGIEL 307 V V+L+RP +RNA++ + E+ + + RAVV+S AG F +GI+L Sbjct: 66 VLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDL 119
>ECH1_MOUSE (O35459) Delta3,5-delta2,4-dienoyl-CoA isomerase, mitochondrial| precursor (EC 5.3.3.-) Length = 327 Score = 38.5 bits (88), Expect = 0.004 Identities = 20/54 (37%), Positives = 32/54 (59%) Frame = +2 Query: 146 VYEVRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPHFCAGIEL 307 V V+L+RP +RNA++ + E+ + + RAVV+S AG F +GI+L Sbjct: 66 VLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDL 119
>ECHA6_MYCLE (Q50130) Probable enoyl-CoA hydratase echA6 (EC 4.2.1.17)| Length = 247 Score = 37.4 bits (85), Expect = 0.010 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%) Frame = +2 Query: 137 AAAVYEVRLSRPAQRNALSPDSFAEIPRAM---ALLDRIPAARAVVLSAAGPHFCAGIEL 307 A V + L RP +RNAL+ ++ A+ + D + R +VL+ G FCAG +L Sbjct: 7 AEGVMTIELQRPERRNALNSQLIEKLREAVQKASSADSEVSTRVIVLTGQGTVFCAGADL 66 Query: 308 GG 313 G Sbjct: 67 SG 68
>ECH14_MYCTU (P64018) Probable enoyl-CoA hydratase echA14 (EC 4.2.1.17)| Length = 256 Score = 36.2 bits (82), Expect = 0.021 Identities = 17/51 (33%), Positives = 31/51 (60%) Frame = +2 Query: 155 VRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPHFCAGIEL 307 + ++ P +RNA++ + A++ A+ + P AVV++ AG FCAG +L Sbjct: 18 ITVNDPDRRNAVTDEMSAQLRAAIQRAEGDPDVHAVVVTGAGKAFCAGADL 68
>ECH14_MYCBO (P64019) Probable enoyl-CoA hydratase echA14 (EC 4.2.1.17)| Length = 256 Score = 36.2 bits (82), Expect = 0.021 Identities = 17/51 (33%), Positives = 31/51 (60%) Frame = +2 Query: 155 VRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPHFCAGIEL 307 + ++ P +RNA++ + A++ A+ + P AVV++ AG FCAG +L Sbjct: 18 ITVNDPDRRNAVTDEMSAQLRAAIQRAEGDPDVHAVVVTGAGKAFCAGADL 68
>ECHM_MOUSE (Q8BH95) Enoyl-CoA hydratase, mitochondrial precursor (EC 4.2.1.17)| (Short chain enoyl-CoA hydratase) (SCEH) (Enoyl-CoA hydratase 1) Length = 290 Score = 35.0 bits (79), Expect = 0.047 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 5/78 (6%) Frame = +2 Query: 89 ELRR-----GFKALAVTRPDPAAAVYEVRLSRPAQRNALSPDSFAEIPRAMALLDRIPAA 253 ELRR F+ + + ++V ++L+RP NAL E+ +A+ ++ PA Sbjct: 23 ELRRFASGANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEQDPAV 82 Query: 254 RAVVLSAAGPHFCAGIEL 307 A+VL+ F AG ++ Sbjct: 83 GAIVLTGGDKAFAAGADI 100
>ECH12_MYCLE (P53526) Probable enoyl-CoA hydratase echA12 (EC 4.2.1.17)| Length = 294 Score = 34.7 bits (78), Expect = 0.062 Identities = 21/82 (25%), Positives = 39/82 (47%) Frame = +2 Query: 59 TGGGASDAEAELRRGFKALAVTRPDPAAAVYEVRLSRPAQRNALSPDSFAEIPRAMALLD 238 T + AE R + + P P A+ + L+RP + N+++ D + + + + Sbjct: 4 TDASCTIAELPYRSVTDLVVLDFPRPEVAL--ITLNRPGRMNSMALDLMKSLKQVLKRIT 61 Query: 239 RIPAARAVVLSAAGPHFCAGIE 304 + R VVL+ AG FC+G + Sbjct: 62 YDHSVRVVVLTGAGRGFCSGAD 83
>ECH12_MYCBO (Q7U004) Probable enoyl-CoA hydratase echA12 (EC 4.2.1.17)| Length = 285 Score = 34.7 bits (78), Expect = 0.062 Identities = 22/78 (28%), Positives = 38/78 (48%) Frame = +2 Query: 71 ASDAEAELRRGFKALAVTRPDPAAAVYEVRLSRPAQRNALSPDSFAEIPRAMALLDRIPA 250 A+ A R + V P P A ++ L+RP + N+++ D + A+A + + Sbjct: 6 AAQVVAGYRSTVSLVLVEHPRPEIA--QITLNRPERMNSMAFDVMVPLKEALAQVSYDNS 63 Query: 251 ARAVVLSAAGPHFCAGIE 304 R VVL+ AG F +G + Sbjct: 64 VRVVVLTGAGRGFSSGAD 81
>ECHM_PONPY (Q5R646) Enoyl-CoA hydratase, mitochondrial precursor (EC 4.2.1.17)| (Short chain enoyl-CoA hydratase) (SCEH) (Enoyl-CoA hydratase 1) Length = 290 Score = 33.9 bits (76), Expect = 0.11 Identities = 16/51 (31%), Positives = 28/51 (54%) Frame = +2 Query: 155 VRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPHFCAGIEL 307 ++L+RP NAL E+ +A+ + + PA A+VL+ F AG ++ Sbjct: 50 IQLNRPKALNALCDGLIDELNQALKIFEEDPAVGAIVLTGGDKAFAAGADI 100
>ECH12_MYCTU (O53163) Probable enoyl-CoA hydratase echA12 (EC 4.2.1.17)| Length = 285 Score = 33.9 bits (76), Expect = 0.11 Identities = 22/78 (28%), Positives = 37/78 (47%) Frame = +2 Query: 71 ASDAEAELRRGFKALAVTRPDPAAAVYEVRLSRPAQRNALSPDSFAEIPRAMALLDRIPA 250 A+ A R + V P P A ++ L+RP + N+++ D + A+A + + Sbjct: 6 AAQVVAGYRSTVSLVLVEHPRPEIA--QITLNRPERMNSMAFDVMVPLKEALAQVSYDNS 63 Query: 251 ARAVVLSAAGPHFCAGIE 304 R VVL+ AG F G + Sbjct: 64 VRVVVLTGAGRGFSPGAD 81
>PECI_HUMAN (O75521) Peroxisomal 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8)| (Dodecenoyl-CoA isomerase) (Delta(3),delta(2)-enoyl-CoA isomerase) (D3,D2-enoyl-CoA isomerase) (DBI-related protein 1) (DRS-1) (Hepatocellular carcinoma-associated antigen 88) (NY Length = 359 Score = 33.5 bits (75), Expect = 0.14 Identities = 19/69 (27%), Positives = 38/69 (55%) Frame = +2 Query: 101 GFKALAVTRPDPAAAVYEVRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAG 280 GF+ L VT D + ++ +RP ++NA++ + + EI RA+ + + VL+ G Sbjct: 103 GFETLVVTSED---GITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNG 158 Query: 281 PHFCAGIEL 307 ++ +G +L Sbjct: 159 DYYSSGNDL 167
>ECHM_RAT (P14604) Enoyl-CoA hydratase, mitochondrial precursor (EC 4.2.1.17)| (Short chain enoyl-CoA hydratase) (SCEH) (Enoyl-CoA hydratase 1) Length = 290 Score = 33.1 bits (74), Expect = 0.18 Identities = 18/68 (26%), Positives = 34/68 (50%) Frame = +2 Query: 104 FKALAVTRPDPAAAVYEVRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGP 283 F+ + + ++V ++L+RP NAL E+ +A+ + PA A+VL+ Sbjct: 33 FQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEK 92 Query: 284 HFCAGIEL 307 F AG ++ Sbjct: 93 AFAAGADI 100
>DCH_THAAR (O87873) Cyclohexa-1,5-dienecarbonyl-CoA hydratase (EC 4.2.1.100)| (Cyclohexa-1,5-diene-1-carboxyl-CoA hydratase) (Dienoyl-CoA hydratase) Length = 257 Score = 33.1 bits (74), Expect = 0.18 Identities = 19/52 (36%), Positives = 30/52 (57%) Frame = +2 Query: 143 AVYEVRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPHFCAG 298 ++ +RL+RP + N + A + +A+ + PA RAV+L A GPHF G Sbjct: 16 SLLRLRLARP-KANIVDAAMIAAMRQALGEHLQAPALRAVLLDAEGPHFSFG 66
>ECHP_MOUSE (Q9DBM2) Peroxisomal bifunctional enzyme (PBE) (PBFE) [Includes:| Enoyl-CoA hydratase (EC 4.2.1.17); 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)] Length = 717 Score = 32.7 bits (73), Expect = 0.24 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 155 VRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPHFCAGIELGG 313 +RL P NA+SP E+ + RA+V+ A +FCAG ++ G Sbjct: 13 IRLCNPPV-NAISPTVITEVRNGLQKASLDHTVRAIVICGANDNFCAGADIHG 64
>ECHM_HUMAN (P30084) Enoyl-CoA hydratase, mitochondrial precursor (EC 4.2.1.17)| (Short chain enoyl-CoA hydratase) (SCEH) (Enoyl-CoA hydratase 1) Length = 290 Score = 32.7 bits (73), Expect = 0.24 Identities = 16/51 (31%), Positives = 27/51 (52%) Frame = +2 Query: 155 VRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPHFCAGIEL 307 ++L+RP NAL E+ +A+ + PA A+VL+ F AG ++ Sbjct: 50 IQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAAGADI 100
>ECHM_BOVIN (Q58DM8) Enoyl-CoA hydratase, mitochondrial precursor (EC 4.2.1.17)| (Short chain enoyl-CoA hydratase) (SCEH) (Enoyl-CoA hydratase 1) Length = 290 Score = 32.3 bits (72), Expect = 0.31 Identities = 16/51 (31%), Positives = 27/51 (52%) Frame = +2 Query: 155 VRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPHFCAGIEL 307 ++L+RP NAL E+ +A+ + PA A+VL+ F AG ++ Sbjct: 50 IQLNRPKALNALCNGLIVELNQALQAFEEDPAVGAIVLTGGEKVFAAGADI 100
>ECHM_CAEEL (P34559) Probable enoyl-CoA hydratase, mitochondrial (EC 4.2.1.17)| Length = 288 Score = 31.6 bits (70), Expect = 0.52 Identities = 15/51 (29%), Positives = 28/51 (54%) Frame = +2 Query: 155 VRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPHFCAGIEL 307 ++L+RP NAL E+ A+ +LD + A+V++ + F AG ++ Sbjct: 48 IKLNRPKALNALCAQLMTELADALEVLDTDKSVGAIVITGSERAFAAGADI 98
>PURL_MYCPA (Q743F0) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)| (FGAM synthase II) Length = 765 Score = 31.2 bits (69), Expect = 0.69 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Frame = +2 Query: 146 VYEVRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAG-PHFCA 295 VY+ L+RP ++AL+ DS A +PR + RA +L+ G PH C+ Sbjct: 398 VYQRPLARPDTQDALNADSSARLPRPATGAE----LRATLLALLGSPHLCS 444
>ECHH_RHOCA (P24162) Probable enoyl-CoA hydratase (EC 4.2.1.17)| Length = 257 Score = 30.8 bits (68), Expect = 0.89 Identities = 20/52 (38%), Positives = 28/52 (53%) Frame = +2 Query: 155 VRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPHFCAGIELG 310 + L RP NAL+ E+ AL ARA+VL+ +G FC+G +LG Sbjct: 17 ITLDRPEVMNALNAAMRHEL--TAALHRARGEARAIVLTGSGRAFCSGQDLG 66
>ECHA8_MYCTU (P64016) Probable enoyl-CoA hydratase echA8 (EC 4.2.1.17)| Length = 257 Score = 30.8 bits (68), Expect = 0.89 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = +2 Query: 155 VRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPHFCAGIEL 307 + L+RP NAL+ E+ A LD P A++++ + F AG ++ Sbjct: 17 ITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADI 67
>ECHA8_MYCBO (P64017) Probable enoyl-CoA hydratase echA8 (EC 4.2.1.17)| Length = 257 Score = 30.8 bits (68), Expect = 0.89 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = +2 Query: 155 VRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPHFCAGIEL 307 + L+RP NAL+ E+ A LD P A++++ + F AG ++ Sbjct: 17 ITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADI 67
>GPDA_DEIRA (Q9RR76) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 328 Score = 30.8 bits (68), Expect = 0.89 Identities = 35/91 (38%), Positives = 42/91 (46%), Gaps = 6/91 (6%) Frame = +2 Query: 56 ATGGGASDAEAELRRGFKA-LAVTRPDPAAAVYEVRLSRPAQRNALSPDSFA---EIPRA 223 A G G + A A R G A L RPD AA + EVR +R L P A ++P A Sbjct: 12 AGGWGTALAVAAARAGQPARLWARRPDFAARLAEVRENREYLPGVLLPPEVAVTSDLPGA 71 Query: 224 MALLDRIPAARAVVLSAAGPHFCAGI--ELG 310 +A D A VV S P AG+ ELG Sbjct: 72 VAGAD---FALLVVPSVGVPELLAGLPRELG 99
>Y4090_STRCO (Q06542) Hypothetical protein SCO4090| Length = 283 Score = 30.4 bits (67), Expect = 1.2 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 3/42 (7%) Frame = -2 Query: 238 VEQRHGARDLREGVRAERVALG---GAAEAHLVDRGRRVRPR 122 +E H A D+ EG+ A R G GAA LV+R R VR R Sbjct: 238 LEADHSAADVAEGIEALRHGDGVAAGAAYGRLVERWRAVRDR 279
>ECHP_RAT (P07896) Peroxisomal bifunctional enzyme (PBE) (PBFE) [Includes:| Enoyl-CoA hydratase (EC 4.2.1.17); 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)] Length = 721 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +2 Query: 155 VRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPHFCAGIELGG 313 +RL P NA+SP E+ + +A+V+ A +FCAG ++ G Sbjct: 13 IRLCNPPV-NAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHG 64
>PRAX_MOUSE (O55103) Periaxin| Length = 1391 Score = 30.4 bits (67), Expect = 1.2 Identities = 30/78 (38%), Positives = 36/78 (46%), Gaps = 1/78 (1%) Frame = +2 Query: 86 AELRRGFKALAVTRPDPAAAVYEVRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVV 265 + LRRG KA AV P PAA RL P R + A++ R A A+A Sbjct: 164 SRLRRGLKAEAVKGPVPAAPARR-RLQLPRLRVREVAEE-AQVARMAAAAPPPRKAKAEA 221 Query: 266 LSAAGPHFCA-GIELGGP 316 +A G F A IEL GP Sbjct: 222 EAATGAGFTAPQIELVGP 239
>CDYL2_HUMAN (Q8N8U2) Chromodomain Y-like protein 2 (CDY-like 2)| Length = 506 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/47 (31%), Positives = 28/47 (59%) Frame = +2 Query: 164 SRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPHFCAGIE 304 S+ + NAL+P+ E+ RA+ ++ ++LSA G FC+G++ Sbjct: 267 SQTSDNNALTPEIMKEVRRALCNA-ATDDSKLLLLSAVGSVFCSGLD 312
>MINC_CHRVO (Q7NSP5) Probable septum site-determining protein minC| Length = 240 Score = 30.0 bits (66), Expect = 1.5 Identities = 23/63 (36%), Positives = 29/63 (46%) Frame = +2 Query: 95 RRGFKALAVTRPDPAAAVYEVRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSA 274 RRG +A+A+ PD A A R +A P S A A + PA +A V SA Sbjct: 73 RRGIRAVALRHPDNALAAVASRYGLAFANSAAQPRS------AQAAAE--PAPKAAVESA 124 Query: 275 AGP 283 A P Sbjct: 125 AAP 127
>CDY1_HUMAN (Q9Y6F8) Testis-specific chromodomain protein Y 1| Length = 540 Score = 30.0 bits (66), Expect = 1.5 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Frame = +2 Query: 164 SRPAQRNALSPDSFAEIPRAM--ALLDRIPAARAVVLSAAGPHFCAGIELG 310 +R ++NAL+ + EI A+ A D ++ V+ SAAG FC G++ G Sbjct: 301 TRSTEKNALNTEVIKEIVNALNSAAADD---SKLVLFSAAGSVFCCGLDFG 348
>ECHH_RHIME (Q52995) Probable enoyl-CoA hydratase (EC 4.2.1.17)| Length = 257 Score = 29.6 bits (65), Expect = 2.0 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +2 Query: 155 VRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPHFCAGIEL 307 + L+RP NAL+ E+ A+ D A A+VL+ + F AG ++ Sbjct: 17 ITLNRPQALNALNAVLMRELDAALKAFDADRAVGAIVLAGSEKAFAAGADI 67
>ECHA8_MYCLE (O07137) Probable enoyl-CoA hydratase echA8 (EC 4.2.1.17)| Length = 257 Score = 29.6 bits (65), Expect = 2.0 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +2 Query: 155 VRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPHFCAGIEL 307 + L+RP NAL+ EI A LD P A++++ + F AG ++ Sbjct: 17 ITLNRPQALNALNSQMMNEITNAAKELDIDPDVGAILITGSPKVFAAGADI 67
>UL47_HHV11 (P10231) Virion protein UL47 (82/81 kDa tegument protein)| (VMW82/81) (VP13/14) Length = 693 Score = 29.3 bits (64), Expect = 2.6 Identities = 16/31 (51%), Positives = 17/31 (54%) Frame = +2 Query: 56 ATGGGASDAEAELRRGFKALAVTRPDPAAAV 148 A G D AELRR F +L RP AAAV Sbjct: 309 ARGSDLDDRAAELRRQFASLTALRPVGAAAV 339
>PRAX_HUMAN (Q9BXM0) Periaxin| Length = 1461 Score = 29.3 bits (64), Expect = 2.6 Identities = 30/81 (37%), Positives = 34/81 (41%), Gaps = 4/81 (4%) Frame = +2 Query: 86 AELRRGFKALAVTRPDPAAAVYEVRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVV 265 + LRRG KA AV P PAA R Q L AE +A L P R Sbjct: 164 SRLRRGLKAEAVKGPVPAAPA-----RRRLQLPRLRVREVAEEAQAARLAAAAPPPRKAK 218 Query: 266 LS---AAGPHFCA-GIELGGP 316 + AAG F A +EL GP Sbjct: 219 VEAEVAAGARFTAPQVELVGP 239
>UL47_HHV1F (P08313) Virion protein UL47 (82/81 kDa tegument protein)| (VMW82/81) (VP13/14) Length = 664 Score = 29.3 bits (64), Expect = 2.6 Identities = 16/31 (51%), Positives = 17/31 (54%) Frame = +2 Query: 56 ATGGGASDAEAELRRGFKALAVTRPDPAAAV 148 A G D AELRR F +L RP AAAV Sbjct: 309 ARGSDLDDRAAELRRQFASLTALRPVGAAAV 339
>CT151_HUMAN (Q8NC74) Protein C20orf151| Length = 664 Score = 29.3 bits (64), Expect = 2.6 Identities = 26/95 (27%), Positives = 36/95 (37%), Gaps = 2/95 (2%) Frame = +2 Query: 8 SPHGTRHALHGRAAQMATGGGASDAEAELRRGFKALAVTRPDPAAAVYEVRLSRPAQRNA 187 SP + LHG A + G A A+ G R P + YE LS + A Sbjct: 210 SPQRISNQLHGTIAVVRPGSQACPADRGPANGTPPPLPARSSPPSPAYERGLSLDSFLRA 269 Query: 188 LSPDSFA-EIPRAMALLDRIPAA-RAVVLSAAGPH 286 P + E P+ +DR+ R + L PH Sbjct: 270 SRPSAMTHEAPKLSPKVDRLCLLNRPLSLHLQSPH 304
>VASA_DROME (P09052) ATP-dependent RNA helicase vasa (EC 3.6.1.-) (Antigen| Mab46F11) Length = 661 Score = 28.9 bits (63), Expect = 3.4 Identities = 21/56 (37%), Positives = 25/56 (44%) Frame = -2 Query: 277 RGGEHDGARGGDAVEQRHGARDLREGVRAERVALGGAAEAHLVDRGRRVRPRHGQG 110 RGG DG GG +R G RD R G R GG+ RG + R G+G Sbjct: 73 RGGNRDG--GGFHGGRREGERDFRGGEGGFRGGQGGSRGGQGGSRGGQGGFRGGEG 126
>PURL_MYCLE (Q50023) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)| (FGAM synthase II) Length = 754 Score = 28.9 bits (63), Expect = 3.4 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Frame = +2 Query: 146 VYEVRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAG-PHFCA 295 VY+ +SRP + AL+ DS +PR ++ RA +L+ G PH C+ Sbjct: 387 VYQRPVSRPESQEALNADSSKGLPRPVS----GDELRATLLALLGSPHLCS 433
>CDYL_MOUSE (Q9WTK2) Chromodomain Y-like protein (CDY-like)| Length = 593 Score = 28.9 bits (63), Expect = 3.4 Identities = 13/47 (27%), Positives = 28/47 (59%) Frame = +2 Query: 164 SRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPHFCAGIE 304 ++ ++ N+L+P+ E+ A++ ++ V+LSA G FC G++ Sbjct: 354 TKSSENNSLNPEVMKEVQSALSTA-AADDSKLVLLSAVGSVFCCGLD 399
>CDYL1_HUMAN (Q9Y232) Chromodomain Y-like protein (CDY-like)| Length = 598 Score = 28.9 bits (63), Expect = 3.4 Identities = 13/47 (27%), Positives = 28/47 (59%) Frame = +2 Query: 164 SRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPHFCAGIE 304 ++ ++ N+L+P+ E+ A++ ++ V+LSA G FC G++ Sbjct: 359 TKSSENNSLNPEVMREVQSALSTA-AADDSKLVLLSAVGSVFCCGLD 404
>CDY2_HUMAN (Q9Y6F7) Testis-specific chromodomain protein Y 2| Length = 541 Score = 28.9 bits (63), Expect = 3.4 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Frame = +2 Query: 164 SRPAQRNALSPDSFAEIPRAM--ALLDRIPAARAVVLSAAGPHFCAGIELG 310 +R ++NAL+ + E+ A+ A D ++ V+ SAAG FC G++ G Sbjct: 302 TRSTEKNALNTEVIKEMVNALNSAAADD---SKLVLFSAAGSVFCCGLDFG 349
>PHLPP_MOUSE (Q8CHE4) PH domain leucine-rich repeat-containing protein| phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat protein phosphatase) (Pleckstrin homology domain-containing family E protein 1) (Suprachiasmatic nucleus circadian oscillatory Length = 1687 Score = 28.5 bits (62), Expect = 4.4 Identities = 23/63 (36%), Positives = 27/63 (42%) Frame = -2 Query: 316 GPAELDARAEVWARGGEHDGARGGDAVEQRHGARDLREGVRAERVALGGAAEAHLVDRGR 137 G A +A E A G G GG +R GA G A A GG A + L+ RGR Sbjct: 48 GAAREEAPCE--APPGPLPGRAGGTGRRRRRGAPQPAAGGAAPVPAAGGGANSLLLKRGR 105 Query: 136 RVR 128 R Sbjct: 106 LKR 108
>CRT_CLOAB (P52046) 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) (Crotonase)| Length = 261 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Frame = +2 Query: 155 VRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAG-PHFCAGIEL 307 V ++RP NAL+ D+ E+ + ++ AV+L+ AG F AG ++ Sbjct: 17 VTINRPKALNALNSDTLKEMDYVIGEIENDSEVLAVILTGAGEKSFVAGADI 68
>ACCD_MYCTU (P63405) Putative acetyl-coenzyme A carboxylase carboxyl| transferase subunit beta (EC 6.4.1.2) (ACCase beta chain) Length = 495 Score = 28.5 bits (62), Expect = 4.4 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = +2 Query: 182 NALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPHFCAGIELGG 313 + + P + E R MAL + +V+ AAGP A E GG Sbjct: 308 STVGPAALREARRGMALAAELCLPLVLVIDAAGPALSAAAEQGG 351
>ACCD_MYCBO (P63406) Putative acetyl-coenzyme A carboxylase carboxyl| transferase subunit beta (EC 6.4.1.2) (ACCase beta chain) Length = 495 Score = 28.5 bits (62), Expect = 4.4 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = +2 Query: 182 NALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPHFCAGIELGG 313 + + P + E R MAL + +V+ AAGP A E GG Sbjct: 308 STVGPAALREARRGMALAAELCLPLVLVIDAAGPALSAAAEQGG 351
>IF2_DESDG (Q30WJ0) Translation initiation factor IF-2| Length = 984 Score = 28.5 bits (62), Expect = 4.4 Identities = 25/79 (31%), Positives = 32/79 (40%) Frame = +2 Query: 17 GTRHALHGRAAQMATGGGASDAEAELRRGFKALAVTRPDPAAAVYEVRLSRPAQRNALSP 196 G + A AA T AS A+ E KA A PAA E ++PA A Sbjct: 78 GAKPAAREEAAPAETEAQASPAQPEA----KAAA-----PAAEAEEAPAAKPAPAKARKA 128 Query: 197 DSFAEIPRAMALLDRIPAA 253 ++ E PRA + P A Sbjct: 129 EARTEAPRARIIRPATPQA 147
>CLIC6_HUMAN (Q96NY7) Chloride intracellular channel 6| Length = 704 Score = 28.1 bits (61), Expect = 5.8 Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Frame = -2 Query: 313 PAELDAR-AEVWARGGEHDGARGGDAVEQRHGARDLREGVRAERVALGGAAEAHLVDRGR 137 PA L R E A GGE +G G + GA + G A + A GG + R Sbjct: 21 PAPLAERPGEPGAAGGEAEGPEGSE------GAEEAPRGAAAVKEAGGGGPDRGPEAEAR 74 Query: 136 RVRPRHGQ 113 R HG+ Sbjct: 75 GTRGAHGE 82
>PRAX_RAT (Q63425) Periaxin| Length = 1383 Score = 28.1 bits (61), Expect = 5.8 Identities = 29/78 (37%), Positives = 35/78 (44%), Gaps = 1/78 (1%) Frame = +2 Query: 86 AELRRGFKALAVTRPDPAAAVYEVRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVV 265 + LRRG KA AV P PAA RL P R + A++ R A A++ Sbjct: 164 SRLRRGLKADAVKGPVPAAPARR-RLQLPRLRVREVAEE-AQVARMAAAAPPSRKAKSEA 221 Query: 266 LSAAGPHFCA-GIELGGP 316 A G F A IEL GP Sbjct: 222 EVATGAGFTAPQIELVGP 239
>ISPH_MYCPA (Q73WH6) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC| 1.17.1.2) Length = 332 Score = 27.7 bits (60), Expect = 7.6 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Frame = -2 Query: 223 GARDLREGVRAERVAL-GGAAEAHLVDRGRRVRPRHGQGL 107 G+R+ VR VAL GGA AHLVD + P +G+ Sbjct: 240 GSRNSSNSVRLVEVALGGGAGAAHLVDWADDIDPAWLEGV 279
>MENB_STAES (Q8CPQ4) Naphthoate synthase (EC 4.1.3.36) (Dihydroxynaphthoic acid| synthetase) (DHNA synthetase) Length = 272 Score = 27.7 bits (60), Expect = 7.6 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +2 Query: 146 VYEVRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPH-FCAG 298 + +V ++RP RNA +P + AE+ A + +VL+ G FC+G Sbjct: 22 IAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDKAFCSG 73
>MENB_STAEQ (Q5HQC3) Naphthoate synthase (EC 4.1.3.36) (Dihydroxynaphthoic acid| synthetase) (DHNA synthetase) Length = 272 Score = 27.7 bits (60), Expect = 7.6 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +2 Query: 146 VYEVRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPH-FCAG 298 + +V ++RP RNA +P + AE+ A + +VL+ G FC+G Sbjct: 22 IAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDKAFCSG 73
>SYS_BORPA (Q7W545) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 451 Score = 27.7 bits (60), Expect = 7.6 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +2 Query: 65 GGASDAEAELRRGFKALAVTRPDPAAAVYEVR 160 G +SD E+RR A R +PAA +EVR Sbjct: 117 GASSDENVEVRRWLPGAADERGNPAALGFEVR 148
>SYS_BORBR (Q7WCM7) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 451 Score = 27.7 bits (60), Expect = 7.6 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +2 Query: 65 GGASDAEAELRRGFKALAVTRPDPAAAVYEVR 160 G +SD E+RR A R +PAA +EVR Sbjct: 117 GASSDENVEVRRWLPGAADERGNPAALGFEVR 148
>ISPE_SYNSC (Q3AKD9) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC| 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) Length = 307 Score = 27.7 bits (60), Expect = 7.6 Identities = 14/41 (34%), Positives = 27/41 (65%) Frame = +2 Query: 179 RNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPHFCAGI 301 ++ ++P++ A + A+ LLD +P + AV +S +GP C G+ Sbjct: 230 QDVVAPET-AAVRSALDLLDSVPQSLAVAMSGSGPS-CFGL 268
>PCNB_SALTY (Q8ZRQ8) Poly(A) polymerase (EC 2.7.7.19) (PAP) (Plasmid copy| number protein) Length = 472 Score = 27.7 bits (60), Expect = 7.6 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +2 Query: 125 RPDPAAAVYEVRLSRPAQRNALSPDSFAEIPRAMALLDRIPAAR 256 R DP + VR + + +SP++ IPR LL+ IP AR Sbjct: 210 REDPVRMLRAVRFAAKLNMH-ISPETAEPIPRLATLLNDIPPAR 252
>CDTA_HAEDU (O06522) Cytolethal distending toxin subunit A precursor (CDT A)| Length = 223 Score = 27.7 bits (60), Expect = 7.6 Identities = 13/41 (31%), Positives = 24/41 (58%) Frame = +2 Query: 164 SRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGPH 286 S+P ++ L+P S P+ LL + P+ +LS++GP+ Sbjct: 26 SQPESQSDLAPKSSTIQPQPQPLLSKTPSMSLNLLSSSGPN 66
>MENB_STAAR (Q6GI37) Naphthoate synthase (EC 4.1.3.36) (Dihydroxynaphthoic acid| synthetase) (DHNA synthetase) Length = 273 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +2 Query: 146 VYEVRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGP-HFCAG 298 + +V ++RP RNA +P + AE+ A + +VL+ G FC+G Sbjct: 23 IAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSG 74
>MENB_STAAN (Q7A6A9) Naphthoate synthase (EC 4.1.3.36) (Dihydroxynaphthoic acid| synthetase) (DHNA synthetase) Length = 273 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +2 Query: 146 VYEVRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGP-HFCAG 298 + +V ++RP RNA +P + AE+ A + +VL+ G FC+G Sbjct: 23 IAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSG 74
>MENB_STAAM (Q99V48) Naphthoate synthase (EC 4.1.3.36) (Dihydroxynaphthoic acid| synthetase) (DHNA synthetase) Length = 273 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +2 Query: 146 VYEVRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGP-HFCAG 298 + +V ++RP RNA +P + AE+ A + +VL+ G FC+G Sbjct: 23 IAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSG 74
>MENB_STAAC (Q5HH38) Naphthoate synthase (EC 4.1.3.36) (Dihydroxynaphthoic acid| synthetase) (DHNA synthetase) Length = 273 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +2 Query: 146 VYEVRLSRPAQRNALSPDSFAEIPRAMALLDRIPAARAVVLSAAGP-HFCAG 298 + +V ++RP RNA +P + AE+ A + +VL+ G FC+G Sbjct: 23 IAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSG 74
>PHLPP_RAT (Q9WTR8) PH domain leucine-rich repeat protein phosphatase (EC| 3.1.3.16) (Pleckstrin homology domain-containing family E protein 1) (Suprachiasmatic nucleus circadian oscillatory protein) Length = 1696 Score = 27.3 bits (59), Expect = 9.9 Identities = 22/63 (34%), Positives = 26/63 (41%) Frame = -2 Query: 316 GPAELDARAEVWARGGEHDGARGGDAVEQRHGARDLREGVRAERVALGGAAEAHLVDRGR 137 G A +A E A G G GG +R G G A A GG A + L+ RGR Sbjct: 49 GAAREEAPCE--APPGPLPGRAGGTGRRRRRGVPQPAAGGAAPVTAAGGGANSLLLRRGR 106 Query: 136 RVR 128 R Sbjct: 107 LKR 109
>PCNB_SALTI (Q8Z9C3) Poly(A) polymerase (EC 2.7.7.19) (PAP) (Plasmid copy| number protein) Length = 472 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = +2 Query: 125 RPDPAAAVYEVRLSRPAQRNALSPDSFAEIPRAMALLDRIPAAR 256 R DP + VR + +SP++ IPR LL+ IP AR Sbjct: 210 REDPVRMLRAVRFAAKLNMR-ISPETAEPIPRLATLLNDIPPAR 252
>COTS_BACSU (P46914) Spore coat protein S (Coat protein 40 kDa component 2)| (COT40-2) Length = 351 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = -2 Query: 238 VEQRHGARDLREG-VRAERVALGGAAEAHLVDRGRRVRPRH 119 VE HG + L+E ++ ER+ A AHL ++G + P H Sbjct: 39 VETDHGPKLLKEAQMKPERMLFITQAHAHLQEKGLPIAPIH 79 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,905,383 Number of Sequences: 219361 Number of extensions: 416923 Number of successful extensions: 2116 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 2044 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2106 length of database: 80,573,946 effective HSP length: 81 effective length of database: 62,805,705 effective search space used: 1507336920 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
