ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast47h12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1C74A2_ORYSA (Q7XYS3) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene ... 118 4e-27
2CP74_LINUS (P48417) Cytochrome P450 74A, chloroplast precursor (... 105 2e-23
3CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor ... 97 8e-21
4C74A2_PARAR (Q40778) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene ... 91 1e-18
5C74A1_ORYSA (Q7Y0C8) Cytochrome P450 74A1, chloroplast precursor... 89 3e-18
6C74A4_ORYSA (Q6Z6K9) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene ... 66 3e-11
7C74A3_ORYSA (Q6Z6L1) Cytochrome P450 74A3 (EC 4.2.1.92) (Allene ... 63 2e-10
8SYL_SYNY3 (P73274) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-... 29 3.7
9GDA1_ASPFU (Q8TGG8) Probable guanosine-diphosphatase (EC 3.6.1.4... 28 6.3
10LEU2_PROMT (Q46HB8) 3-isopropylmalate dehydratase large subunit ... 28 8.2
11TRPA_MAIZE (P42390) Indole-3-glycerol phosphate lyase, chloropla... 28 8.2

>C74A2_ORYSA (Q7XYS3) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase|
           2) (Hydroperoxide dehydrase 2)
          Length = 478

 Score =  118 bits (296), Expect = 4e-27
 Identities = 57/79 (72%), Positives = 68/79 (86%), Gaps = 1/79 (1%)
 Frame = +2

Query: 2   EKKNLFTGTYMPSTSLTGGFRVCSYLDPSEPTHTKVKQLLFSLLASRKDAFIPAFRSHFS 181
           EK+++FTGT+MPSTSLTGG+RVC+YLDPSEP H K+KQLL SLL SRKDAF+P FRS+F 
Sbjct: 87  EKRDVFTGTFMPSTSLTGGYRVCAYLDPSEPNHAKIKQLLLSLLVSRKDAFVPVFRSNFG 146

Query: 182 SLLATVESQLLL-SGKSNF 235
           +LL TVESQL    GKS+F
Sbjct: 147 ALLDTVESQLASGGGKSDF 165



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>CP74_LINUS (P48417) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)|
           (Allene oxide synthase) (Hydroperoxide dehydrase)
          Length = 536

 Score =  105 bits (263), Expect = 2e-23
 Identities = 50/79 (63%), Positives = 60/79 (75%)
 Frame = +2

Query: 2   EKKNLFTGTYMPSTSLTGGFRVCSYLDPSEPTHTKVKQLLFSLLASRKDAFIPAFRSHFS 181
           EKK+LFTGTYMPST LTGG+R+ SYLDPSEP HTK+KQLLF+L+ +R+D  IP F S F+
Sbjct: 150 EKKDLFTGTYMPSTELTGGYRILSYLDPSEPNHTKLKQLLFNLIKNRRDYVIPEFSSSFT 209

Query: 182 SLLATVESQLLLSGKSNFN 238
            L   VE  L   GK+ FN
Sbjct: 210 DLCEVVEYDLATKGKAAFN 228



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>CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)|
           (Allene oxide synthase) (Hydroperoxide dehydrase)
          Length = 518

 Score = 97.4 bits (241), Expect = 8e-21
 Identities = 45/78 (57%), Positives = 59/78 (75%)
 Frame = +2

Query: 2   EKKNLFTGTYMPSTSLTGGFRVCSYLDPSEPTHTKVKQLLFSLLASRKDAFIPAFRSHFS 181
           EKK+LFTGTYMPST LTGG+R+ SYLDPSEP H K+K LLF LL S ++   P F++ +S
Sbjct: 132 EKKDLFTGTYMPSTELTGGYRILSYLDPSEPKHEKLKNLLFFLLKSSRNRIFPEFQATYS 191

Query: 182 SLLATVESQLLLSGKSNF 235
            L  ++E +L L GK++F
Sbjct: 192 ELFDSLEKELSLKGKADF 209



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>C74A2_PARAR (Q40778) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase)|
           (Rubber particle protein) (RPP)
          Length = 473

 Score = 90.5 bits (223), Expect = 1e-18
 Identities = 42/79 (53%), Positives = 57/79 (72%)
 Frame = +2

Query: 2   EKKNLFTGTYMPSTSLTGGFRVCSYLDPSEPTHTKVKQLLFSLLASRKDAFIPAFRSHFS 181
           EKK+LFTGTYMPST LTG +RV SYLDPSEP H ++K LLF +L +  +  IP F + ++
Sbjct: 87  EKKDLFTGTYMPSTKLTGAYRVLSYLDPSEPRHAQLKNLLFFMLKNSSNRVIPQFETTYT 146

Query: 182 SLLATVESQLLLSGKSNFN 238
            L   +E++L  +GK+ FN
Sbjct: 147 ELFEGLEAELAKNGKAAFN 165



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>C74A1_ORYSA (Q7Y0C8) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92)|
           (Allene oxide synthase 1) (Hydroperoxide dehydrase 1)
          Length = 512

 Score = 89.0 bits (219), Expect = 3e-18
 Identities = 42/78 (53%), Positives = 54/78 (69%)
 Frame = +2

Query: 2   EKKNLFTGTYMPSTSLTGGFRVCSYLDPSEPTHTKVKQLLFSLLASRKDAFIPAFRSHFS 181
           +K +LFTGT+MPST LTGG+RV SYLDPSEP H  +K LLF LL+ R+   IP FR  + 
Sbjct: 126 DKTDLFTGTFMPSTDLTGGYRVLSYLDPSEPNHAPLKTLLFYLLSHRRQQVIPKFREVYG 185

Query: 182 SLLATVESQLLLSGKSNF 235
            L   +E+ L   GK++F
Sbjct: 186 DLFGLMENDLARVGKADF 203



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>C74A4_ORYSA (Q6Z6K9) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase|
           4) (Hydroperoxide dehydrase 4)
          Length = 510

 Score = 65.9 bits (159), Expect = 3e-11
 Identities = 30/79 (37%), Positives = 50/79 (63%)
 Frame = +2

Query: 2   EKKNLFTGTYMPSTSLTGGFRVCSYLDPSEPTHTKVKQLLFSLLASRKDAFIPAFRSHFS 181
           +K +   GT+MPS +L GG R  ++LD ++P H K+K+++ SL A+R     PAFR+ F+
Sbjct: 108 DKADTLDGTFMPSLALFGGHRPLAFLDAADPRHAKIKRVVMSLAAARMHHVAPAFRAAFA 167

Query: 182 SLLATVESQLLLSGKSNFN 238
           ++   V++ L+  G   FN
Sbjct: 168 AMFDEVDAGLVAGGPVEFN 186



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>C74A3_ORYSA (Q6Z6L1) Cytochrome P450 74A3 (EC 4.2.1.92) (Allene oxide synthase|
           3) (Hydroperoxide dehydrase 3)
          Length = 500

 Score = 63.2 bits (152), Expect = 2e-10
 Identities = 29/70 (41%), Positives = 46/70 (65%)
 Frame = +2

Query: 2   EKKNLFTGTYMPSTSLTGGFRVCSYLDPSEPTHTKVKQLLFSLLASRKDAFIPAFRSHFS 181
           +K +   GTYMPS +L GG R  ++LD ++P H K+K+++ SL A+R     PAFR+ F+
Sbjct: 108 DKADTLDGTYMPSRALFGGHRPLAFLDAADPRHAKIKRVVMSLAAARMHHVAPAFRAAFA 167

Query: 182 SLLATVESQL 211
           ++   VE+ L
Sbjct: 168 AMFDAVEAGL 177



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>SYL_SYNY3 (P73274) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 869

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +2

Query: 8   KNLFTGTYMPSTSLTGGFRVCSYLDPSEPTHTKVKQLLFSLLASRK 145
           KN  TG Y+P+  L  G +V    DP +P   +  Q+ +  ++  K
Sbjct: 582 KNPTTGKYVPAKDLQTGQQVIDPKDPKDPDSGEPLQVFYEKMSKSK 627



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>GDA1_ASPFU (Q8TGG8) Probable guanosine-diphosphatase (EC 3.6.1.42) (GDPase)|
          Length = 503

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 201 STVASSEEKWERKAGMKASLREARREKSSCLTL 103
           STV   E+ W   AG++ +L+E R     CL L
Sbjct: 416 STVCGGEDSWGIFAGIEGALKELRDRPEWCLDL 448



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>LEU2_PROMT (Q46HB8) 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)|
           (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI)
          Length = 469

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = +2

Query: 44  SLTGGFRVCSYLDPSEPTHTKVKQLLFSLLASRKDAFIPAFRSHFSSLLATVESQLLLSG 223
           ++ GG R C Y++P E T   +K    +      D  I  ++S  S   AT + ++ L G
Sbjct: 224 AIEGGAR-CGYINPDETTFKYIKGKEHAPKGQEWDKAISWWKSLASDSKATFDDEIQLDG 282

Query: 224 KS 229
            S
Sbjct: 283 SS 284



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>TRPA_MAIZE (P42390) Indole-3-glycerol phosphate lyase, chloroplast precursor|
           (EC 4.1.2.-) (Indole synthase) (Tryptophan synthase
           alpha chain) (EC 4.2.1.20) (Benzoxazineless 1)
          Length = 347

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +2

Query: 83  PSEPTHTKVKQLLFSLLASRKDAFIPAFRSHFSSLLATVESQLLLSG 223
           P+E     V   + +L+A  K AFIP   +    L  T E+  LL G
Sbjct: 82  PAERRSRPVSDTMAALMAKGKTAFIPYITAGDPDLATTAEALRLLDG 128


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.303    0.113    0.272 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,555,866
Number of Sequences: 219361
Number of extensions: 255694
Number of successful extensions: 516
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 516
length of database: 80,573,946
effective HSP length: 56
effective length of database: 68,289,730
effective search space used: 1638953520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
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