>AIR12_ARATH (Q94BT2) Auxin-induced in root cultures protein 12 precursor|
          Length = 252

 Score = 78.2 bits (191), Expect = 5e-15
 Identities = 37/57 (64%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
 Frame = +1

Query: 97  YAKCEDLPQLGAALHWTYDESKSSLSLAFVAAPAGAN-GWVAWALNPTGEGMAGAQA 264
           +  CEDLP L + LH+TY+ S SSLS+AFVA P+ AN GWVAWA+NPTG  MAG+QA
Sbjct: 40  FDSCEDLPVLNSYLHYTYNSSNSSLSVAFVATPSQANGGWVAWAINPTGTKMAGSQA 96

>RA51B_HUMAN (O15315) DNA repair protein RAD51 homolog 2 (R51H2) (RAD51-like|
           protein 1) (Rad51B)
          Length = 384

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
 Frame = -1

Query: 263 ACAPAMPSPVGLSAQATHPLAPAGAATNASERDDLDSS*VQC------SAAPSCGRS 111
           ACAP M +  G+ AQ +   +PA  +T  S  D+     V C      +  P CG++
Sbjct: 59  ACAPKMQTAYGIKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKT 115

>Y4WB_RHISN (P55680) Hypothetical zinc protease-like protein y4wB|
          Length = 447

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +1

Query: 82  PAGKTYAKCED-LPQLGAALHWTYDESKSSLSLAFVAAP 195
           PAG +     D +P+LG A+   YD  ++ LSLA+   P
Sbjct: 242 PAGPSLTPVVDAVPKLGRAIRVAYDLPQAQLSLAYPGIP 280

>RCOR1_HUMAN (Q9UKL0) REST corepressor 1 (Protein CoREST)|
          Length = 482

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = -1

Query: 257 APAMPSPVGLSAQATHPLA-PAGAATNASERDDLDSS*VQCSAAPSCGRSSHLAYVFPAG 81
           A A  S    SA A+   A PA  A + +      ++    +AAP+ G++  LA   P G
Sbjct: 18  AAASASAAAASAAASAACASPAATAASGAAASSASAAAASAAAAPNNGQNKSLAAAAPNG 77

Query: 80  N 78
           N
Sbjct: 78  N 78


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,931,052
Number of Sequences: 219361
Number of extensions: 246287
Number of successful extensions: 1173
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 80,573,946
effective HSP length: 65
effective length of database: 66,315,481
effective search space used: 1591571544
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)