| Clone Name | bast47h05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | emb|X91347.1|HVUDPGPP H.vulgare mRNA for UDP-glucose pyrophospho... | 48 | 0.003 | 2 | gb|BT009219.1| Triticum aestivum clone wle1n.pk0063.d7:fis, full... | 40 | 0.65 | 3 | gb|BC104676.1| Rattus norvegicus serine/threonine kinase 6, mRNA... | 38 | 2.6 | 4 | ref|NM_153296.2| Rattus norvegicus serine/threonine kinase 6 (St... | 38 | 2.6 |
|---|
>emb|X91347.1|HVUDPGPP H.vulgare mRNA for UDP-glucose pyrophosphorylase Length = 1783 Score = 48.1 bits (24), Expect = 0.003 Identities = 24/24 (100%) Strand = Plus / Plus Query: 43 ttccagtcatctgacatctcctcc 66 |||||||||||||||||||||||| Sbjct: 27 ttccagtcatctgacatctcctcc 50
>gb|BT009219.1| Triticum aestivum clone wle1n.pk0063.d7:fis, full insert mRNA sequence Length = 1814 Score = 40.1 bits (20), Expect = 0.65 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 ttccagtcatctgacatctcctcc 66 ||||||||||||||||||| |||| Sbjct: 20 ttccagtcatctgacatctgctcc 43
>gb|BC104676.1| Rattus norvegicus serine/threonine kinase 6, mRNA (cDNA clone MGC:124935 IMAGE:7453115), complete cds Length = 2384 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ttccagtcatctgacatct 61 ||||||||||||||||||| Sbjct: 1959 ttccagtcatctgacatct 1941
>ref|NM_153296.2| Rattus norvegicus serine/threonine kinase 6 (Stk6), mRNA Length = 2384 Score = 38.2 bits (19), Expect = 2.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ttccagtcatctgacatct 61 ||||||||||||||||||| Sbjct: 1959 ttccagtcatctgacatct 1941 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 139,096 Number of Sequences: 3902068 Number of extensions: 139096 Number of successful extensions: 8312 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 8308 Number of HSP's gapped (non-prelim): 4 length of query: 67 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 46 effective length of database: 17,151,101,840 effective search space: 788950684640 effective search space used: 788950684640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)