| Clone Name | bast47e09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016666.1| Zea mays clone Contig499 mRNA sequence Length = 1992 Score = 541 bits (273), Expect = e-151 Identities = 399/441 (90%) Strand = Plus / Plus Query: 1 agctttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcg 60 ||||||||||| |||||||||||||||||||||||||||||||||||| | | |||||| Sbjct: 812 agctttgctgtgcaccaggatgttgatggaagggcaactgatgttgctttagcatggtca 871 Query: 61 gttgcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgat 120 |||||||| || ||||| ||||| |||||||||||| | ||||||||||||||||||||| Sbjct: 872 gttgcacttggttcccccttcacgtttgctactactttggaacaggagtacaagagtgat 931 Query: 121 atctttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgttt 180 |||||||| |||||||| || |||||||||||||||||||| |||||||||||||||||| Sbjct: 932 atctttggagagcgaggcatcttgctgggtgctgtccatggtatcgtggaggctctgttt 991 Query: 181 aggagatacacagagcaaggaatggatgaggagtcggcatacaaaagcactgttgagggc 240 ||||| |||||||| |||||||||||||| |||||||| ||||||| |||||| |||||| Sbjct: 992 aggaggtacacagaacaaggaatggatgaagagtcggcctacaaaaacactgtcgagggc 1051 Query: 241 atcactggaatcatctcaaagaccatctcaaagaaggggatgcttgaggtatacaactcc 300 || ||||| |||||||| || |||||||||||||| ||||||||||| || |||||||| Sbjct: 1052 ataactgggatcatctcgaaaaccatctcaaagaaagggatgcttgaagtgtacaactct 1111 Query: 301 ttgagcgcggaaggcaaaaaggagttcaacaaggcatacagtgcatcattttacccttgc 360 ||||||| ||||||||||||||||||||||||||| || || ||||| |||||||| ||| Sbjct: 1112 ttgagcgaggaaggcaaaaaggagttcaacaaggcttatagcgcatcgttttacccgtgc 1171 Query: 361 atggacatcctctacgaatgctatgaagatgttgcctctggaagtgaaatcccgagtgtt 420 ||||| || ||||||||||||||||||||||| ||||||||||||||||||| ||| || Sbjct: 1172 atggatatactctacgaatgctatgaagatgtggcctctggaagtgaaatccggagcgtg 1231 Query: 421 gtgttggctggtcggaggttt 441 ||||||||||| ||||||||| Sbjct: 1232 gtgttggctgggcggaggttt 1252
>gb|AY103782.1| Zea mays PCO080860 mRNA sequence Length = 2117 Score = 541 bits (273), Expect = e-151 Identities = 399/441 (90%) Strand = Plus / Plus Query: 1 agctttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcg 60 ||||||||||| |||||||||||||||||||||||||||||||||||| | | |||||| Sbjct: 904 agctttgctgtgcaccaggatgttgatggaagggcaactgatgttgctttagcatggtca 963 Query: 61 gttgcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgat 120 |||||||| || ||||| ||||| |||||||||||| | ||||||||||||||||||||| Sbjct: 964 gttgcacttggttcccccttcacgtttgctactactttggaacaggagtacaagagtgat 1023 Query: 121 atctttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgttt 180 |||||||| |||||||| || |||||||||||||||||||| |||||||||||||||||| Sbjct: 1024 atctttggagagcgaggcatcttgctgggtgctgtccatggtatcgtggaggctctgttt 1083 Query: 181 aggagatacacagagcaaggaatggatgaggagtcggcatacaaaagcactgttgagggc 240 ||||| |||||||| |||||||||||||| |||||||| ||||||| |||||| |||||| Sbjct: 1084 aggaggtacacagaacaaggaatggatgaagagtcggcctacaaaaacactgtcgagggc 1143 Query: 241 atcactggaatcatctcaaagaccatctcaaagaaggggatgcttgaggtatacaactcc 300 || ||||| |||||||| || |||||||||||||| ||||||||||| || |||||||| Sbjct: 1144 ataactgggatcatctcgaaaaccatctcaaagaaagggatgcttgaagtgtacaactct 1203 Query: 301 ttgagcgcggaaggcaaaaaggagttcaacaaggcatacagtgcatcattttacccttgc 360 ||||||| ||||||||||||||||||||||||||| || || ||||| |||||||| ||| Sbjct: 1204 ttgagcgaggaaggcaaaaaggagttcaacaaggcttatagcgcatcgttttacccatgc 1263 Query: 361 atggacatcctctacgaatgctatgaagatgttgcctctggaagtgaaatcccgagtgtt 420 ||||| || ||||||||||||||||||||||| ||||||||||||||||||| ||| || Sbjct: 1264 atggatatactctacgaatgctatgaagatgtggcctctggaagtgaaatccggagcgtg 1323 Query: 421 gtgttggctggtcggaggttt 441 ||||||||||| ||||||||| Sbjct: 1324 gtgttggctgggcggaggttt 1344
>dbj|AK065295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N13, full insert sequence Length = 1983 Score = 496 bits (250), Expect = e-137 Identities = 388/434 (89%) Strand = Plus / Plus Query: 4 tttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcggtt 63 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 840 tttgctgttcaccaggatgttgatggaagggcaactgatgttgctctaggatggtcagtt 899 Query: 64 gcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgatatc 123 || || ||||| || ||||| ||||||||||| ||||||||||||||||||| |||||| Sbjct: 900 gcgctgggatctcccttcacatttgctactaccttagaacaggagtacaagagcgatatc 959 Query: 124 tttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgtttagg 183 |||||||||||||| ||| | || || ||||| ||||||||||||||||||||||||||| Sbjct: 960 tttggggagcgaggcattcttcttggagctgttcatggcatcgtggaggctctgtttagg 1019 Query: 184 agatacacagagcaaggaatggatgaggagtcggcatacaaaagcactgttgagggcatc 243 |||||||||||||||||||||||||| || ||||||||||| ||| || ||||||||| Sbjct: 1020 agatacacagagcaaggaatggatgaagaaatggcatacaaaaacaccgtagagggcatc 1079 Query: 244 actggaatcatctcaaagaccatctcaaagaaggggatgcttgaggtatacaactccttg 303 |||||||| ||||| || || |||||||||||||| |||||||| || |||||||||||| Sbjct: 1080 actggaattatctcgaaaactatctcaaagaagggaatgcttgaagtgtacaactccttg 1139 Query: 304 agcgcggaaggcaaaaaggagttcaacaaggcatacagtgcatcattttacccttgcatg 363 | | ||| || || ||||| ||||||||||| |||||||||||||| || ||||||||| Sbjct: 1140 acagaggaggggaagaaggaattcaacaaggcctacagtgcatcattctatccttgcatg 1199 Query: 364 gacatcctctacgaatgctatgaagatgttgcctctggaagtgaaatcccgagtgttgtg 423 ||||| ||||| || ||||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 1200 gacatactctatgagtgctacgaagatgttgcctctggaagtgaaatccggagtgttgtg 1259 Query: 424 ttggctggtcggag 437 |||||||| ||||| Sbjct: 1260 ttggctggacggag 1273
>dbj|AK061892.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-G05, full insert sequence Length = 1153 Score = 488 bits (246), Expect = e-135 Identities = 387/434 (89%) Strand = Plus / Plus Query: 4 tttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcggtt 63 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 28 tttgctgttcaccaggatgttgatggaagggcaactgatgttgctctaggatggtcagtt 87 Query: 64 gcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgatatc 123 || || ||||| || ||||| ||||||||||| ||||||||||||||||||| |||||| Sbjct: 88 gcgctgggatctcccttcacatttgctactaccttagaacaggagtacaagagcgatatc 147 Query: 124 tttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgtttagg 183 |||||||||||||| ||| || || ||||| ||||||||||||||||||||||||||| Sbjct: 148 tttggggagcgaggcattcctcttggagctgttcatggcatcgtggaggctctgtttagg 207 Query: 184 agatacacagagcaaggaatggatgaggagtcggcatacaaaagcactgttgagggcatc 243 |||||||||||||||||||||||||| || ||||||||||| ||| || ||||||||| Sbjct: 208 agatacacagagcaaggaatggatgaagaaatggcatacaaaaacaccgtagagggcatc 267 Query: 244 actggaatcatctcaaagaccatctcaaagaaggggatgcttgaggtatacaactccttg 303 |||||||| ||||| || || |||||||||||||| |||||||| || |||||||||||| Sbjct: 268 actggaattatctcgaaaactatctcaaagaagggaatgcttgaagtgtacaactccttg 327 Query: 304 agcgcggaaggcaaaaaggagttcaacaaggcatacagtgcatcattttacccttgcatg 363 | | ||| || || ||||| ||||||||||| |||||||||||||| || ||||||||| Sbjct: 328 acagaggaggggaagaaggaattcaacaaggcctacagtgcatcattctatccttgcatg 387 Query: 364 gacatcctctacgaatgctatgaagatgttgcctctggaagtgaaatcccgagtgttgtg 423 ||||| ||||| || ||||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 388 gacatactctatgagtgctacgaagatgttgcctctggaagtgaaatccggagtgttgtg 447 Query: 424 ttggctggtcggag 437 |||||||| ||||| Sbjct: 448 ttggctggacggag 461
>ref|NM_192395.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1746 Score = 299 bits (151), Expect = 4e-78 Identities = 361/431 (83%) Strand = Plus / Plus Query: 1 agctttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcg 60 ||||||||||| |||||||||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 781 agctttgctgtacaccaggatgttgatggaagagcaacagatgtcgctcttggatggtca 840 Query: 61 gttgcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgat 120 ||||| ||||| || || ||||| ||||||||||||||||| ||||||||| || ||| Sbjct: 841 gttgctctaggttctcctttcacatttgctactactctagagcaggagtaccgaagcgat 900 Query: 121 atctttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgttt 180 || ||||| |||||||| |||||||| || ||||| ||||| || ||||||||||| || Sbjct: 901 atttttggcgagcgaggtattttgcttggggctgtacatggtattgtggaggctcttttc 960 Query: 181 aggagatacacagagcaaggaatggatgaggagtcggcatacaaaagcactgttgagggc 240 ||||||||||||||||| || |||||||||| || |||||||| | |||||||||| || Sbjct: 961 aggagatacacagagcatgggttggatgaggactcagcatacaagaacactgttgagtgc 1020 Query: 241 atcactggaatcatctcaaagaccatctcaaagaaggggatgcttgaggtatacaactcc 300 ||||||||||||||||| || || || || || |||||||||||||| || ||||| || Sbjct: 1021 atcactggaatcatctctaaaactatttcgaaaaaggggatgcttgaagtgtacaattca 1080 Query: 301 ttgagcgcggaaggcaaaaaggagttcaacaaggcatacagtgcatcattttacccttgc 360 |||| | ||||| || ||| | || | | |||| ||||||||| ||| ||| || ||| Sbjct: 1081 ttgacagaagaaggaaagaagcaatttatcgaggcttacagtgcagcatattatccatgc 1140 Query: 361 atggacatcctctacgaatgctatgaagatgttgcctctggaagtgaaatcccgagtgtt 420 ||||| || || || |||||||||||||||||| | |||||||||||||| |||||| Sbjct: 1141 atggatatactatatgaatgctatgaagatgtttcttctggaagtgaaattagaagtgtt 1200 Query: 421 gtgttggctgg 431 || |||||||| Sbjct: 1201 gttttggctgg 1211
>dbj|AK072075.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013115K02, full insert sequence Length = 1917 Score = 299 bits (151), Expect = 4e-78 Identities = 361/431 (83%) Strand = Plus / Plus Query: 1 agctttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcg 60 ||||||||||| |||||||||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 732 agctttgctgtacaccaggatgttgatggaagagcaacagatgtcgctcttggatggtca 791 Query: 61 gttgcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgat 120 ||||| ||||| || || ||||| ||||||||||||||||| ||||||||| || ||| Sbjct: 792 gttgctctaggttctcctttcacatttgctactactctagagcaggagtaccgaagcgat 851 Query: 121 atctttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgttt 180 || ||||| |||||||| |||||||| || ||||| ||||| || ||||||||||| || Sbjct: 852 atttttggcgagcgaggtattttgcttggggctgtacatggtattgtggaggctcttttc 911 Query: 181 aggagatacacagagcaaggaatggatgaggagtcggcatacaaaagcactgttgagggc 240 ||||||||||||||||| || |||||||||| || |||||||| | |||||||||| || Sbjct: 912 aggagatacacagagcatgggttggatgaggactcagcatacaagaacactgttgagtgc 971 Query: 241 atcactggaatcatctcaaagaccatctcaaagaaggggatgcttgaggtatacaactcc 300 ||||||||||||||||| || || || || || |||||||||||||| || ||||| || Sbjct: 972 atcactggaatcatctctaaaactatttcgaaaaaggggatgcttgaagtgtacaattca 1031 Query: 301 ttgagcgcggaaggcaaaaaggagttcaacaaggcatacagtgcatcattttacccttgc 360 |||| | ||||| || ||| | || | | |||| ||||||||| ||| ||| || ||| Sbjct: 1032 ttgacagaagaaggaaagaagcaatttatcgaggcttacagtgcagcatattatccatgc 1091 Query: 361 atggacatcctctacgaatgctatgaagatgttgcctctggaagtgaaatcccgagtgtt 420 ||||| || || || |||||||||||||||||| | |||||||||||||| |||||| Sbjct: 1092 atggatatactatatgaatgctatgaagatgtttcttctggaagtgaaattagaagtgtt 1151 Query: 421 gtgttggctgg 431 || |||||||| Sbjct: 1152 gttttggctgg 1162
>gb|BT009123.1| Triticum aestivum clone wl1n.pk0013.e12:fis, full insert mRNA sequence Length = 1957 Score = 268 bits (135), Expect = 1e-68 Identities = 339/407 (83%) Strand = Plus / Plus Query: 1 agctttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcg 60 |||||||||||||||||||||||||||||||||||||| ||||| ||||| || ||||| Sbjct: 807 agctttgctgttcaccaggatgttgatggaagggcaacagatgtagctctagggtggtca 866 Query: 61 gttgcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgat 120 || || |||| || || ||||| ||||||||||||||||| ||||||||| |||||| Sbjct: 867 gtagctttaggttctcctttcacatttgctactactctagagcaggagtaccggagtgac 926 Query: 121 atctttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgttt 180 || ||||| |||||||| |||||||| ||||||||||||||||| ||||||||||| || Sbjct: 927 atttttggcgagcgaggtattttgcttggtgctgtccatggcatggtggaggctcttttc 986 Query: 181 aggagatacacagagcaaggaatggatgaggagtcggcatacaaaagcactgttgagggc 240 |||||||||||||| ||||||||||| ||||| || ||||| || | ||||| ||| || Sbjct: 987 aggagatacacagaacaaggaatggacgaggactcagcatataagaatactgtagagagc 1046 Query: 241 atcactggaatcatctcaaagaccatctcaaagaaggggatgcttgaggtatacaactcc 300 ||||||||||| || || || || || ||||||||||| |||||||| || || |||||| Sbjct: 1047 atcactggaattatatcgaaaactatttcaaagaagggtatgcttgaagtgtataactcc 1106 Query: 301 ttgagcgcggaaggcaaaaaggagttcaacaaggcatacagtgcatcattttacccttgc 360 |||| | ||||| || ||| |||| | |||| || |||||| ||| |||||| ||| Sbjct: 1107 ttgactgaagaaggaaagaagcagtttattgaggcctatagtgcagcatattacccatgc 1166 Query: 361 atggacatcctctacgaatgctatgaagatgttgcctctggaagtga 407 |||||||| | || || ||||||||||| || | ||||||||||| Sbjct: 1167 atggacatattgtatgagtgctatgaagacgtctcttctggaagtga 1213
>gb|AY103707.1| Zea mays PCO072121 mRNA sequence Length = 1985 Score = 268 bits (135), Expect = 1e-68 Identities = 339/407 (83%) Strand = Plus / Plus Query: 1 agctttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcg 60 |||||||||||||||||||||||||||||||||||||| ||||| ||||| || ||||| Sbjct: 818 agctttgctgttcaccaggatgttgatggaagggcaacagatgtagctctagggtggtca 877 Query: 61 gttgcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgat 120 || || |||| || || ||||| ||||||||||||||||| ||||||||| |||||| Sbjct: 878 gtagctttaggttctcctttcacatttgctactactctagagcaggagtaccggagtgac 937 Query: 121 atctttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgttt 180 || ||||| |||||||| |||||||| ||||||||||||||||| ||||||||||| || Sbjct: 938 atttttggcgagcgaggtattttgcttggtgctgtccatggcatggtggaggctcttttc 997 Query: 181 aggagatacacagagcaaggaatggatgaggagtcggcatacaaaagcactgttgagggc 240 |||||||||||||| ||||||||||| ||||| || ||||| || | ||||| ||| || Sbjct: 998 aggagatacacagaacaaggaatggacgaggactcagcatataagaatactgtagagagc 1057 Query: 241 atcactggaatcatctcaaagaccatctcaaagaaggggatgcttgaggtatacaactcc 300 ||||||||||| || || || || || ||||||||||| |||||||| || || |||||| Sbjct: 1058 atcactggaattatatcgaaaactatttcaaagaagggtatgcttgaagtgtataactcc 1117 Query: 301 ttgagcgcggaaggcaaaaaggagttcaacaaggcatacagtgcatcattttacccttgc 360 |||| | ||||| || ||| |||| | |||| || |||||| ||| |||||| ||| Sbjct: 1118 ttgactgaagaaggaaagaagcagtttattgaggcctatagtgcagcatattacccatgc 1177 Query: 361 atggacatcctctacgaatgctatgaagatgttgcctctggaagtga 407 |||||||| | || || ||||||||||| || | ||||||||||| Sbjct: 1178 atggacatattgtatgagtgctatgaagacgtctcttctggaagtga 1224
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 172 bits (87), Expect = 7e-40 Identities = 144/163 (88%) Strand = Plus / Minus Query: 275 aggggatgcttgaggtatacaactccttgagcgcggaaggcaaaaaggagttcaacaagg 334 |||| |||||||| || ||||||||||||| | ||| || || ||||| |||||||||| Sbjct: 144255 agggaatgcttgaagtgtacaactccttgacagaggaggggaagaaggaattcaacaagg 144196 Query: 335 catacagtgcatcattttacccttgcatggacatcctctacgaatgctatgaagatgttg 394 | |||||||||||||| || |||||||||||||| ||||| || ||||| |||||||||| Sbjct: 144195 cctacagtgcatcattctatccttgcatggacatactctatgagtgctacgaagatgttg 144136 Query: 395 cctctggaagtgaaatcccgagtgttgtgttggctggtcggag 437 |||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 144135 cctctggaagtgaaatccggagtgttgtgttggctggacggag 144093 Score = 163 bits (82), Expect = 6e-37 Identities = 112/122 (91%) Strand = Plus / Minus Query: 16 caggatgttgatggaagggcaactgatgttgctcttggatggtcggttgcactaggatcc 75 ||||||||||||||||||||||||||||||||||| |||||||| ||||| || ||||| Sbjct: 144650 caggatgttgatggaagggcaactgatgttgctctaggatggtcagttgcgctgggatct 144591 Query: 76 ccgttcacctttgctactactctagaacaggagtacaagagtgatatctttggggagcga 135 || ||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 144590 cccttcacatttgctactaccttagaacaggagtacaagagcgatatctttggggagcga 144531 Query: 136 gg 137 || Sbjct: 144530 gg 144529 Score = 157 bits (79), Expect = 4e-35 Identities = 115/127 (90%) Strand = Plus / Minus Query: 151 gctgtccatggcatcgtggaggctctgtttaggagatacacagagcaaggaatggatgag 210 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144449 gctgttcatggcatcgtggaggctctgtttaggagatacacagagcaaggaatggatgaa 144390 Query: 211 gagtcggcatacaaaagcactgttgagggcatcactggaatcatctcaaagaccatctca 270 || ||||||||||| ||| || ||||||||||||||||| ||||| || || |||||| Sbjct: 144389 gaaatggcatacaaaaacaccgtagagggcatcactggaattatctcgaaaactatctca 144330 Query: 271 aagaagg 277 ||||||| Sbjct: 144329 aagaagg 144323
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 172 bits (87), Expect = 7e-40 Identities = 144/163 (88%) Strand = Plus / Minus Query: 275 aggggatgcttgaggtatacaactccttgagcgcggaaggcaaaaaggagttcaacaagg 334 |||| |||||||| || ||||||||||||| | ||| || || ||||| |||||||||| Sbjct: 28360013 agggaatgcttgaagtgtacaactccttgacagaggaggggaagaaggaattcaacaagg 28359954 Query: 335 catacagtgcatcattttacccttgcatggacatcctctacgaatgctatgaagatgttg 394 | |||||||||||||| || |||||||||||||| ||||| || ||||| |||||||||| Sbjct: 28359953 cctacagtgcatcattctatccttgcatggacatactctatgagtgctacgaagatgttg 28359894 Query: 395 cctctggaagtgaaatcccgagtgttgtgttggctggtcggag 437 |||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 28359893 cctctggaagtgaaatccggagtgttgtgttggctggacggag 28359851 Score = 163 bits (82), Expect = 6e-37 Identities = 112/122 (91%) Strand = Plus / Minus Query: 16 caggatgttgatggaagggcaactgatgttgctcttggatggtcggttgcactaggatcc 75 ||||||||||||||||||||||||||||||||||| |||||||| ||||| || ||||| Sbjct: 28360408 caggatgttgatggaagggcaactgatgttgctctaggatggtcagttgcgctgggatct 28360349 Query: 76 ccgttcacctttgctactactctagaacaggagtacaagagtgatatctttggggagcga 135 || ||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 28360348 cccttcacatttgctactaccttagaacaggagtacaagagcgatatctttggggagcga 28360289 Query: 136 gg 137 || Sbjct: 28360288 gg 28360287 Score = 157 bits (79), Expect = 4e-35 Identities = 115/127 (90%) Strand = Plus / Minus Query: 151 gctgtccatggcatcgtggaggctctgtttaggagatacacagagcaaggaatggatgag 210 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28360207 gctgttcatggcatcgtggaggctctgtttaggagatacacagagcaaggaatggatgaa 28360148 Query: 211 gagtcggcatacaaaagcactgttgagggcatcactggaatcatctcaaagaccatctca 270 || ||||||||||| ||| || ||||||||||||||||| ||||| || || |||||| Sbjct: 28360147 gaaatggcatacaaaaacaccgtagagggcatcactggaattatctcgaaaactatctca 28360088 Query: 271 aagaagg 277 ||||||| Sbjct: 28360087 aagaagg 28360081
>emb|X57073.1|SOAHRI S.oleracea AHRI mRNA for acetohydroxy acid reductoisomerase Length = 2050 Score = 141 bits (71), Expect = 2e-30 Identities = 134/155 (86%) Strand = Plus / Plus Query: 1 agctttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcg 60 ||||||||||||||||||||||||||||| ||||| || ||||| || ||||| ||||| Sbjct: 854 agctttgctgttcaccaggatgttgatggtagggctacagatgtagcacttggctggtca 913 Query: 61 gttgcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgat 120 |||| || ||||| || ||||| |||||||||||||| || ||||| || |||||||| Sbjct: 914 attgctcttggatctcctttcacatttgctactactcttgagcaggaatataagagtgac 973 Query: 121 atctttggggagcgaggaattttgctgggtgctgt 155 ||||||||||||||||| || ||||| |||||||| Sbjct: 974 atctttggggagcgaggtatcttgcttggtgctgt 1008 Score = 56.0 bits (28), Expect = 1e-04 Identities = 160/204 (78%) Strand = Plus / Plus Query: 228 cactgttgagggcatcactggaatcatctcaaagaccatctcaaagaaggggatgcttga 287 |||||||||| |||||||||| |||| ||||||||||| |||| ||||| ||||||| Sbjct: 1081 cactgttgagtgcatcactggtgtcatatcaaagaccatatcaacaaagggaatgcttgc 1140 Query: 288 ggtatacaactccttgagcgcggaaggcaaaaaggagttcaacaaggcatacagtgcatc 347 | ||||| || ||| | |||||||||||||| ||| | || ||||| || || Sbjct: 1141 cttgtacaattctttgtcagaagaaggcaaaaaggacttccaagctgcttacagcgcctc 1200 Query: 348 attttacccttgcatggacatcctctacgaatgctatgaagatgttgcctctggaagtga 407 || ||||||| |||||||| | ||||| ||||||||||||||||| ||| ||||| Sbjct: 1201 atactacccttcaatggacattttgtacgagtgctatgaagatgttgctagtggtagtga 1260 Query: 408 aatcccgagtgttgtgttggctgg 431 |||| |||||||| |||||||| Sbjct: 1261 gatccgaagtgttgttttggctgg 1284
>ref|NM_115723.2| Arabidopsis thaliana ketol-acid reductoisomerase AT3G58610 mRNA, complete cds Length = 2087 Score = 135 bits (68), Expect = 1e-28 Identities = 158/188 (84%) Strand = Plus / Plus Query: 4 tttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcggtt 63 ||||| || |||||||||||||| || || || | |||||||| | |||||||| || Sbjct: 920 tttgcagtccaccaggatgttgacggtagagccgccgatgttgcattgggatggtcagta 979 Query: 64 gcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgatatc 123 ||||| || || ||||| || |||||||||||||| ||||||||||||| |||||| ||| Sbjct: 980 gcacttggttctccgtttacttttgctactactcttgaacaggagtacaggagtgacatc 1039 Query: 124 tttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgtttagg 183 ||||| || ||||||||||||| |||||||| || || ||||||||| |||||||||| Sbjct: 1040 tttggagaaagaggaattttgcttggtgctgttcacggaatcgtggagtctctgtttaga 1099 Query: 184 agatacac 191 |||||||| Sbjct: 1100 agatacac 1107
>gb|BT000822.1| Arabidopsis thaliana ketol-acid reductoisomerase (At3g58610/F14P22_200) mRNA, complete cds Length = 1776 Score = 135 bits (68), Expect = 1e-28 Identities = 158/188 (84%) Strand = Plus / Plus Query: 4 tttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcggtt 63 ||||| || |||||||||||||| || || || | |||||||| | |||||||| || Sbjct: 811 tttgcagtccaccaggatgttgacggtagagccgccgatgttgcattgggatggtcagta 870 Query: 64 gcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgatatc 123 ||||| || || ||||| || |||||||||||||| ||||||||||||| |||||| ||| Sbjct: 871 gcacttggttctccgtttacttttgctactactcttgaacaggagtacaggagtgacatc 930 Query: 124 tttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgtttagg 183 ||||| || ||||||||||||| |||||||| || || ||||||||| |||||||||| Sbjct: 931 tttggagaaagaggaattttgcttggtgctgttcacggaatcgtggagtctctgtttaga 990 Query: 184 agatacac 191 |||||||| Sbjct: 991 agatacac 998
>gb|BT000669.1| Arabidopsis thaliana clone RAFL07-09-M16 (R10765) putative ketol-acid reductoisomerase (At3g58610) mRNA, complete cds Length = 2028 Score = 135 bits (68), Expect = 1e-28 Identities = 158/188 (84%) Strand = Plus / Plus Query: 4 tttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcggtt 63 ||||| || |||||||||||||| || || || | |||||||| | |||||||| || Sbjct: 861 tttgcagtccaccaggatgttgacggtagagccgccgatgttgcattgggatggtcagta 920 Query: 64 gcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgatatc 123 ||||| || || ||||| || |||||||||||||| ||||||||||||| |||||| ||| Sbjct: 921 gcacttggttctccgtttacttttgctactactcttgaacaggagtacaggagtgacatc 980 Query: 124 tttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgtttagg 183 ||||| || ||||||||||||| |||||||| || || ||||||||| |||||||||| Sbjct: 981 tttggagaaagaggaattttgcttggtgctgttcacggaatcgtggagtctctgtttaga 1040 Query: 184 agatacac 191 |||||||| Sbjct: 1041 agatacac 1048
>gb|AY096556.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610) mRNA, complete cds Length = 1807 Score = 135 bits (68), Expect = 1e-28 Identities = 158/188 (84%) Strand = Plus / Plus Query: 4 tttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcggtt 63 ||||| || |||||||||||||| || || || | |||||||| | |||||||| || Sbjct: 811 tttgcagtccaccaggatgttgacggtagagccgccgatgttgcattgggatggtcagta 870 Query: 64 gcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgatatc 123 ||||| || || ||||| || |||||||||||||| ||||||||||||| |||||| ||| Sbjct: 871 gcacttggttctccgtttacttttgctactactcttgaacaggagtacaggagtgacatc 930 Query: 124 tttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgtttagg 183 ||||| || ||||||||||||| |||||||| || || ||||||||| |||||||||| Sbjct: 931 tttggagaaagaggaattttgcttggtgctgttcacggaatcgtggagtctctgtttaga 990 Query: 184 agatacac 191 |||||||| Sbjct: 991 agatacac 998
>gb|AY065398.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610) mRNA, complete cds Length = 2058 Score = 135 bits (68), Expect = 1e-28 Identities = 158/188 (84%) Strand = Plus / Plus Query: 4 tttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcggtt 63 ||||| || |||||||||||||| || || || | |||||||| | |||||||| || Sbjct: 920 tttgcagtccaccaggatgttgacggtagagccgccgatgttgcattgggatggtcagta 979 Query: 64 gcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgatatc 123 ||||| || || ||||| || |||||||||||||| ||||||||||||| |||||| ||| Sbjct: 980 gcacttggttctccgtttacttttgctactactcttgaacaggagtacaggagtgacatc 1039 Query: 124 tttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgtttagg 183 ||||| || ||||||||||||| |||||||| || || ||||||||| |||||||||| Sbjct: 1040 tttggagaaagaggaattttgcttggtgctgttcacggaatcgtggagtctctgtttaga 1099 Query: 184 agatacac 191 |||||||| Sbjct: 1100 agatacac 1107
>gb|AF329500.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610) mRNA, complete cds Length = 1996 Score = 135 bits (68), Expect = 1e-28 Identities = 158/188 (84%) Strand = Plus / Plus Query: 4 tttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcggtt 63 ||||| || |||||||||||||| || || || | |||||||| | |||||||| || Sbjct: 857 tttgcagtccaccaggatgttgacggtagagccgccgatgttgcattgggatggtcagta 916 Query: 64 gcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgatatc 123 ||||| || || ||||| || |||||||||||||| ||||||||||||| |||||| ||| Sbjct: 917 gcacttggttctccgtttacttttgctactactcttgaacaggagtacaggagtgacatc 976 Query: 124 tttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgtttagg 183 ||||| || ||||||||||||| |||||||| || || ||||||||| |||||||||| Sbjct: 977 tttggagaaagaggaattttgcttggtgctgttcacggaatcgtggagtctctgtttaga 1036 Query: 184 agatacac 191 |||||||| Sbjct: 1037 agatacac 1044
>gb|AY062094.1| Arabidopsis thaliana AT3g58610/F14P22_200 mRNA, complete cds Length = 1990 Score = 135 bits (68), Expect = 1e-28 Identities = 158/188 (84%) Strand = Plus / Plus Query: 4 tttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcggtt 63 ||||| || |||||||||||||| || || || | |||||||| | |||||||| || Sbjct: 855 tttgcagtccaccaggatgttgacggtagagccgccgatgttgcattgggatggtcagta 914 Query: 64 gcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgatatc 123 ||||| || || ||||| || |||||||||||||| ||||||||||||| |||||| ||| Sbjct: 915 gcacttggttctccgtttacttttgctactactcttgaacaggagtacaggagtgacatc 974 Query: 124 tttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgtttagg 183 ||||| || ||||||||||||| |||||||| || || ||||||||| |||||||||| Sbjct: 975 tttggagaaagaggaattttgcttggtgctgttcacggaatcgtggagtctctgtttaga 1034 Query: 184 agatacac 191 |||||||| Sbjct: 1035 agatacac 1042
>dbj|AK221938.1| Arabidopsis thaliana mRNA for ketol-acid reductoisomerase, complete cds, clone: RAFL22-45-C07 Length = 1266 Score = 135 bits (68), Expect = 1e-28 Identities = 158/188 (84%) Strand = Plus / Plus Query: 4 tttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcggtt 63 ||||| || |||||||||||||| || || || | |||||||| | |||||||| || Sbjct: 133 tttgcagtccaccaggatgttgacggtagagccgccgatgttgcattgggatggtcagta 192 Query: 64 gcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgatatc 123 ||||| || || ||||| || |||||||||||||| ||||||||||||| |||||| ||| Sbjct: 193 gcacttggttctccgtttacttttgctactactcttgaacaggagtacaggagtgacatc 252 Query: 124 tttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgtttagg 183 ||||| || ||||||||||||| |||||||| || || ||||||||| |||||||||| Sbjct: 253 tttggagaaagaggaattttgcttggtgctgttcacggaatcgtggagtctctgtttaga 312 Query: 184 agatacac 191 |||||||| Sbjct: 313 agatacac 320
>gb|AF324671.2|AF324671 Arabidopsis thaliana AT3g58610 (AT3g58610/F14P22_200) mRNA, complete cds Length = 1980 Score = 135 bits (68), Expect = 1e-28 Identities = 158/188 (84%) Strand = Plus / Plus Query: 4 tttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcggtt 63 ||||| || |||||||||||||| || || || | |||||||| | |||||||| || Sbjct: 857 tttgcagtccaccaggatgttgacggtagagccgccgatgttgcattgggatggtcagta 916 Query: 64 gcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgatatc 123 ||||| || || ||||| || |||||||||||||| ||||||||||||| |||||| ||| Sbjct: 917 gcacttggttctccgtttacttttgctactactcttgaacaggagtacaggagtgacatc 976 Query: 124 tttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgtttagg 183 ||||| || ||||||||||||| |||||||| || || ||||||||| |||||||||| Sbjct: 977 tttggagaaagaggaattttgcttggtgctgttcacggaatcgtggagtctctgtttaga 1036 Query: 184 agatacac 191 |||||||| Sbjct: 1037 agatacac 1044
>emb|BX823796.1|CNS0A4R1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS76ZD11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1983 Score = 135 bits (68), Expect = 1e-28 Identities = 158/188 (84%) Strand = Plus / Plus Query: 4 tttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcggtt 63 ||||| || |||||||||||||| || || || | |||||||| | |||||||| || Sbjct: 871 tttgcagtccaccaggatgttgacggtagagccgccgatgttgcattgggatggtcagta 930 Query: 64 gcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgatatc 123 ||||| || || ||||| || |||||||||||||| ||||||||||||| |||||| ||| Sbjct: 931 gcacttggttctccgtttacttttgctactactcttgaacaggagtacaggagtgacatc 990 Query: 124 tttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgtttagg 183 ||||| || ||||||||||||| |||||||| || || ||||||||| |||||||||| Sbjct: 991 tttggagaaagaggaattttgcttggtgctgttcacggaatcgtggagtctctgtttaga 1050 Query: 184 agatacac 191 |||||||| Sbjct: 1051 agatacac 1058
>emb|X68150.1|ATKARE A.thaliana mRNA for ketol-acid reductoisomerase subunit Length = 1966 Score = 127 bits (64), Expect = 3e-26 Identities = 121/140 (86%) Strand = Plus / Plus Query: 52 ggatggtcggttgcactaggatccccgttcacctttgctactactctagaacaggagtac 111 |||||||| || ||||| || || ||||| || |||||||||||||| |||||||||||| Sbjct: 883 ggatggtcagtagcacttggttctccgtttacttttgctactactcttgaacaggagtac 942 Query: 112 aagagtgatatctttggggagcgaggaattttgctgggtgctgtccatggcatcgtggag 171 | |||||| |||||||| || ||||||||||||| |||||||| || || ||||||||| Sbjct: 943 aggagtgacatctttggagaaagaggaattttgcttggtgctgttcacggaatcgtggag 1002 Query: 172 gctctgtttaggagatacac 191 |||||||||| |||||||| Sbjct: 1003 tctctgtttagaagatacac 1022
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 117 bits (59), Expect = 3e-23 Identities = 104/119 (87%) Strand = Plus / Plus Query: 139 attttgctgggtgctgtccatggcatcgtggaggctctgtttaggagatacacagagcaa 198 |||||||| || ||||| ||||| || ||||||||||| || ||||||||||||||||| Sbjct: 26387995 attttgcttggggctgtacatggtattgtggaggctcttttcaggagatacacagagcat 26388054 Query: 199 ggaatggatgaggagtcggcatacaaaagcactgttgagggcatcactggaatcatctc 257 || |||||||||| || |||||||| | |||||||||| ||||||||||||||||||| Sbjct: 26388055 gggttggatgaggactcagcatacaagaacactgttgagtgcatcactggaatcatctc 26388113 Score = 115 bits (58), Expect = 1e-22 Identities = 106/122 (86%) Strand = Plus / Plus Query: 16 caggatgttgatggaagggcaactgatgttgctcttggatggtcggttgcactaggatcc 75 ||||||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||| || Sbjct: 26387805 caggatgttgatggaagagcaacagatgtcgctcttggatggtcagttgctctaggttct 26387864 Query: 76 ccgttcacctttgctactactctagaacaggagtacaagagtgatatctttggggagcga 135 || ||||| ||||||||||||||||| ||||||||| || ||||| ||||| |||||| Sbjct: 26387865 cctttcacatttgctactactctagagcaggagtaccgaagcgatatttttggcgagcga 26387924 Query: 136 gg 137 || Sbjct: 26387925 gg 26387926 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 332 aggcatacagtgcatcattttacccttgcatggacatcctctacgaatgctatgaagatg 391 |||| ||||||||| ||| ||| || |||||||| || || || |||||||||||||||| Sbjct: 26388314 aggcttacagtgcagcatattatccatgcatggatatactatatgaatgctatgaagatg 26388373 Query: 392 ttgcctctggaagtgaaatcccgagtgttgtgttggctgg 431 || | |||||||||||||| |||||||| |||||||| Sbjct: 26388374 tttcttctggaagtgaaattagaagtgttgttttggctgg 26388413
>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032K15 Length = 126195 Score = 117 bits (59), Expect = 3e-23 Identities = 104/119 (87%) Strand = Plus / Plus Query: 139 attttgctgggtgctgtccatggcatcgtggaggctctgtttaggagatacacagagcaa 198 |||||||| || ||||| ||||| || ||||||||||| || ||||||||||||||||| Sbjct: 61860 attttgcttggggctgtacatggtattgtggaggctcttttcaggagatacacagagcat 61919 Query: 199 ggaatggatgaggagtcggcatacaaaagcactgttgagggcatcactggaatcatctc 257 || |||||||||| || |||||||| | |||||||||| ||||||||||||||||||| Sbjct: 61920 gggttggatgaggactcagcatacaagaacactgttgagtgcatcactggaatcatctc 61978 Score = 115 bits (58), Expect = 1e-22 Identities = 106/122 (86%) Strand = Plus / Plus Query: 16 caggatgttgatggaagggcaactgatgttgctcttggatggtcggttgcactaggatcc 75 ||||||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||| || Sbjct: 61670 caggatgttgatggaagagcaacagatgtcgctcttggatggtcagttgctctaggttct 61729 Query: 76 ccgttcacctttgctactactctagaacaggagtacaagagtgatatctttggggagcga 135 || ||||| ||||||||||||||||| ||||||||| || ||||| ||||| |||||| Sbjct: 61730 cctttcacatttgctactactctagagcaggagtaccgaagcgatatttttggcgagcga 61789 Query: 136 gg 137 || Sbjct: 61790 gg 61791 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 332 aggcatacagtgcatcattttacccttgcatggacatcctctacgaatgctatgaagatg 391 |||| ||||||||| ||| ||| || |||||||| || || || |||||||||||||||| Sbjct: 62179 aggcttacagtgcagcatattatccatgcatggatatactatatgaatgctatgaagatg 62238 Query: 392 ttgcctctggaagtgaaatcccgagtgttgtgttggctgg 431 || | |||||||||||||| |||||||| |||||||| Sbjct: 62239 tttcttctggaagtgaaattagaagtgttgttttggctgg 62278
>gb|BT016378.1| Zea mays clone Contig211 mRNA sequence Length = 1029 Score = 113 bits (57), Expect = 5e-22 Identities = 207/257 (80%) Strand = Plus / Plus Query: 151 gctgtccatggcatcgtggaggctctgtttaggagatacacagagcaaggaatggatgag 210 |||||||||||||| ||||||||||| || |||||||||||||| ||||||||||| ||| Sbjct: 8 gctgtccatggcatggtggaggctcttttcaggagatacacagaacaaggaatggacgag 67 Query: 211 gagtcggcatacaaaagcactgttgagggcatcactggaatcatctcaaagaccatctca 270 || || ||||| || | ||||| ||| ||||||||||||| || || || || || ||| Sbjct: 68 gactcagcatataagaatactgtagagagcatcactggaattatatcgaaaactatttca 127 Query: 271 aagaaggggatgcttgaggtatacaactccttgagcgcggaaggcaaaaaggagttcaac 330 |||||||| |||||||| || || ||||| ||| | ||||| || ||| |||| | Sbjct: 128 aagaagggtatgcttgaagtgtataactctctgactgaagaaggaaagaagcagtttatt 187 Query: 331 aaggcatacagtgcatcattttacccttgcatggacatcctctacgaatgctatgaagat 390 |||| || |||||| ||| |||||| ||||||||||| | || || ||||||||||| Sbjct: 188 gaggcctatagtgcagcatattacccatgcatggacatattgtatgagtgctatgaagac 247 Query: 391 gttgcctctggaagtga 407 || | ||||||||||| Sbjct: 248 gtctcttctggaagtga 264
>dbj|D21110.1|RICAD400 Oryza sativa mRNA for acetohydroxy acid reductoisomerase, partial sequence Length = 376 Score = 93.7 bits (47), Expect = 5e-16 Identities = 182/229 (79%) Strand = Plus / Minus Query: 203 tggatgaggagtcggcatacaaaagcactgttgagggcatcactggaatcatctcaaaga 262 ||||| |||| || |||||||| | |||||||||| ||||||| |||| |||||| || | Sbjct: 324 tggatnaggactcagcatacaagaacactgttgagtgcatcacnggaancatctctaaaa 265 Query: 263 ccatctcaaagaaggggatgcttgaggtatacaactccttgagcgcggaaggcaaaaagg 322 | || | || |||||||||||||| || ||||| || |||| | ||||| || ||| Sbjct: 264 ctattncgaaaaaggggatgcttgaagtgtacaattcattgacagaagaaggaaagaagc 205 Query: 323 agttcaacaaggcatacagtgcatcattttacccttgcatggacatcctctacgaatgct 382 | || | | |||| ||||||||| ||| ||| || |||||||| || || || ||||||| Sbjct: 204 aatttancgaggcttacagtgcagcatattatccatgcatggatatactatatgaatgct 145 Query: 383 atgaagatgttgcctctggaagtgaaatcccgagtgttgtgttggctgg 431 ||||||||||| | ||||||||| |||| |||||||| |||||||| Sbjct: 144 atgaagatgtttcttctggaagtnaaattagaagtgttgttttggctgg 96
>emb|Y17796.1|PSY17796 Pisum sativum mRNA for ketol-acid reductoisomerase Length = 2036 Score = 89.7 bits (45), Expect = 8e-15 Identities = 123/149 (82%) Strand = Plus / Plus Query: 13 caccaggatgttgatggaagggcaactgatgttgctcttggatggtcggttgcactagga 72 ||||||||||| ||||| ||||| ||| |||||||| | || ||||| ||||| || || Sbjct: 796 caccaggatgtggatggcagggctactaatgttgctttggggtggtctgttgcccttggt 855 Query: 73 tccccgttcacctttgctactactctagaacaggagtacaagagtgatatctttggggag 132 || || ||||| ||||| ||||| |||| || || ||||||||||| || ||||| ||| Sbjct: 856 tctcctttcacatttgccactacattagagcaagaatacaagagtgacatttttggagag 915 Query: 133 cgaggaattttgctgggtgctgtccatgg 161 |||||||||| ||||||||||| ||||| Sbjct: 916 agaggaattttactgggtgctgttcatgg 944 Score = 42.1 bits (21), Expect = 1.6 Identities = 81/101 (80%) Strand = Plus / Plus Query: 334 gcatacagtgcatcattttacccttgcatggacatcctctacgaatgctatgaagatgtt 393 ||||||||||| || ||||| || |||||||| || | || || |||||||| ||||| Sbjct: 1117 gcatacagtgcttccttttatccctgcatggaaattttgtatgagtgctatgaggatgta 1176 Query: 394 gcctctggaagtgaaatcccgagtgttgtgttggctggtcg 434 ||| ||| ||||| || | |||||||| ||||||||||| Sbjct: 1177 gccagtggtagtgagattcgcagtgttgttttggctggtcg 1217
>emb|AJ251333.1|PSA251333 Pisum sativum aair gene for acetohydroxy acid isomeroreductase, exons 1-9 Length = 3343 Score = 83.8 bits (42), Expect = 5e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 16 caggatgttgatggaagggcaactgatgttgctcttggatggtcggttgcactaggatcc 75 |||||||| ||||| ||||| ||| |||||||| | || ||||| ||||| || || || Sbjct: 1830 caggatgtggatggcagggctactaatgttgctttggggtggtctgttgcccttggttct 1889 Query: 76 ccgttcacctttgctactactctagaacaggagtacaagagtgatatctttggggagcga 135 || ||||| ||||| ||||| |||| || || ||||||||||| || ||||| ||| || Sbjct: 1890 cctttcacatttgccactacattagagcaagaatacaagagtgacatttttggagagaga 1949 Query: 136 ggaattttgctgggtgctgtccatgg 161 |||||||| ||||||||||| ||||| Sbjct: 1950 ggaattttactgggtgctgttcatgg 1975 Score = 42.1 bits (21), Expect = 1.6 Identities = 81/101 (80%) Strand = Plus / Plus Query: 334 gcatacagtgcatcattttacccttgcatggacatcctctacgaatgctatgaagatgtt 393 ||||||||||| || ||||| || |||||||| || | || || |||||||| ||||| Sbjct: 2262 gcatacagtgcttccttttatccctgcatggaaattttgtatgagtgctatgaggatgta 2321 Query: 394 gcctctggaagtgaaatcccgagtgttgtgttggctggtcg 434 ||| ||| ||||| || | |||||||| ||||||||||| Sbjct: 2322 gccagtggtagtgagattcgcagtgttgttttggctggtcg 2362
>gb|AC135231.23| Medicago truncatula clone mth2-28m10, complete sequence Length = 106771 Score = 81.8 bits (41), Expect = 2e-12 Identities = 101/121 (83%) Strand = Plus / Minus Query: 17 aggatgttgatggaagggcaactgatgttgctcttggatggtcggttgcactaggatccc 76 ||||||| ||||| ||||| |||||||||||| | |||||||| ||||| || || || | Sbjct: 74959 aggatgtggatggcagggctactgatgttgctttgggatggtctgttgcccttggttctc 74900 Query: 77 cgttcacctttgctactactctagaacaggagtacaagagtgatatctttggggagcgag 136 | ||||| ||||| ||||| |||| ||||| ||||| ||||| |||||||||||| ||| Sbjct: 74899 ctttcacatttgccactacattagagcaggaatacaaaagtgacatctttggggagagag 74840 Query: 137 g 137 | Sbjct: 74839 g 74839 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 334 gcatacagtgcatcattttacccttgcatggacatcctctacgaatgctatgaagatgtt 393 ||||||||||| || ||||| || ||||||||||| | || || |||||||||||||| Sbjct: 74437 gcatacagtgcttccttttatccctgcatggacattttgtatgagtgctatgaagatgta 74378 Query: 394 gcctctggaagtgaaatcccgagtgttgtgttggctggtcg 434 ||| ||| ||||| || | |||||||| ||||||||||| Sbjct: 74377 gccagtggtagtgagattcgtagtgttgttttggctggtcg 74337
>emb|X69880.1|ATAAI A.thaliana gene for acetohydroxy acid isomeroreductase Length = 4395 Score = 73.8 bits (37), Expect = 4e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 16 caggatgttgatggaagggcaactgatgttgctcttggatggtcggttgcactaggatcc 75 ||||||||||| || || || | |||||||| | |||||||| || ||||| || || Sbjct: 2601 caggatgttgacggtagagccgccgatgttgcattgggatggtcagtagcacttggttct 2660 Query: 76 ccgttcacctttgctactactctagaacaggagtacaagagtgatatctttgg 128 ||||| || |||||||||||||| ||||||||||||| |||||| |||||||| Sbjct: 2661 ccgtttacttttgctactactcttgaacaggagtacaggagtgacatctttgg 2713 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 135 aggaattttgctgggtgctgtccatggcatcgtggaggctctgtttaggagatacac 191 |||||||||||| |||||||| || || ||||||||| |||||||||| |||||||| Sbjct: 2799 aggaattttgcttggtgctgttcacggaatcgtggagtctctgtttagaagatacac 2855
>emb|AL137082.1|ATF14P22 Arabidopsis thaliana DNA chromosome 3, BAC clone F14P22 Length = 94239 Score = 73.8 bits (37), Expect = 4e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 16 caggatgttgatggaagggcaactgatgttgctcttggatggtcggttgcactaggatcc 75 ||||||||||| || || || | |||||||| | |||||||| || ||||| || || Sbjct: 66580 caggatgttgacggtagagccgccgatgttgcattgggatggtcagtagcacttggttct 66639 Query: 76 ccgttcacctttgctactactctagaacaggagtacaagagtgatatctttgg 128 ||||| || |||||||||||||| ||||||||||||| |||||| |||||||| Sbjct: 66640 ccgtttacttttgctactactcttgaacaggagtacaggagtgacatctttgg 66692 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 135 aggaattttgctgggtgctgtccatggcatcgtggaggctctgtttaggagatacac 191 |||||||||||| |||||||| || || ||||||||| |||||||||| |||||||| Sbjct: 66778 aggaattttgcttggtgctgttcacggaatcgtggagtctctgtttagaagatacac 66834
>gb|DQ163261.1| Candidatus Hamiltonella defensa clone P040089 genomic sequence Length = 1818 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 259 aagaccatctcaaagaagggga 280 |||||||||||||||||||||| Sbjct: 1714 aagaccatctcaaagaagggga 1693
>gb|DQ163792.1| Candidatus Hamiltonella defensa clone P180035 genomic sequence Length = 1661 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 259 aagaccatctcaaagaagggga 280 |||||||||||||||||||||| Sbjct: 1550 aagaccatctcaaagaagggga 1529
>gb|AC163998.2| Mus musculus chromosome 15, clone RP24-326H11, complete sequence Length = 153996 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 tctcaaagaccatctcaaaga 274 ||||||||||||||||||||| Sbjct: 113517 tctcaaagaccatctcaaaga 113497
>emb|BX936312.12| Zebrafish DNA sequence from clone DKEY-204O5 in linkage group 7, complete sequence Length = 158510 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 310 gaaggcaaaaaggagttcaac 330 ||||||||||||||||||||| Sbjct: 4979 gaaggcaaaaaggagttcaac 4959
>emb|AL356295.9| Human DNA sequence from clone RP11-768P11 on chromosome 13, complete sequence Length = 134347 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 aagaaggggatgcttgaggta 291 ||||||||||||||||||||| Sbjct: 101929 aagaaggggatgcttgaggta 101909
>gb|AC087113.11| Mus Musculus Strain C57BL6/J Chromosome 15 BAC, RP23-99A15, Complete Sequence, complete sequence Length = 223882 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 tctcaaagaccatctcaaaga 274 ||||||||||||||||||||| Sbjct: 174216 tctcaaagaccatctcaaaga 174236
>emb|AL845434.11| Mouse DNA sequence from clone RP23-211O3 on chromosome 2, complete sequence Length = 131971 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 443 tgacaggaaggccttctgctt 463 ||||||||||||||||||||| Sbjct: 31001 tgacaggaaggccttctgctt 30981
>gb|AC007208.13| Drosophila melanogaster clone BACR05D08, complete sequence Length = 172190 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 aaaaaggagttcaacaaggc 335 |||||||||||||||||||| Sbjct: 16801 aaaaaggagttcaacaaggc 16820
>ref|XM_526042.1| PREDICTED: Pan troglodytes ephrin receptor EphA4 (LOC470660), mRNA Length = 2280 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ttgctgttcaccaggatgtt 24 |||||||||||||||||||| Sbjct: 1559 ttgctgttcaccaggatgtt 1540
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 gcgcggaaggcaaaaaggagttca 328 ||||||||||||||||| |||||| Sbjct: 1771449 gcgcggaaggcaaaaagaagttca 1771472
>gb|AC164536.5| Mus musculus chromosome 18, clone RP23-425H1, complete sequence Length = 188835 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 agtacaagagtgatatcttt 126 |||||||||||||||||||| Sbjct: 91855 agtacaagagtgatatcttt 91874
>gb|AY232099.1| Drosophila yakuba clone yak-ad_CG11876 mRNA sequence Length = 597 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 aaagcactgttgagggcatc 243 |||||||||||||||||||| Sbjct: 116 aaagcactgttgagggcatc 97
>emb|AL513165.12| Human DNA sequence from clone RP11-613M10 on chromosome 9 Contains part of a novel gene, the FBXO10 gene (FBX10) for F-box only protein 10, two novel genes, a RAB1B (member RAS oncogene family) pseudogene the 5' end of a novel gene (KIAA0967) and three CpG islands, complete sequence Length = 194976 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 437 ggtttatgacaggaaggccttctg 460 |||| ||||||||||||||||||| Sbjct: 32063 ggttgatgacaggaaggccttctg 32040
>emb|AL391374.9| Human DNA sequence from clone RP11-631G24 on chromosome 13 Contains a novel gene, complete sequence Length = 172883 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 269 caaagaaggggatgcttgaggtat 292 ||||||||||| |||||||||||| Sbjct: 103159 caaagaaggggctgcttgaggtat 103182
>gb|BC026327.1| Homo sapiens EPH receptor A4, mRNA (cDNA clone MGC:26318 IMAGE:4814429), complete cds Length = 3149 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ttgctgttcaccaggatgtt 24 |||||||||||||||||||| Sbjct: 2305 ttgctgttcaccaggatgtt 2286
>gb|AC090858.6| Homo sapiens chromosome 11, clone RP11-676E14, complete sequence Length = 168906 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 gttgcctctggaagtgaaat 410 |||||||||||||||||||| Sbjct: 87312 gttgcctctggaagtgaaat 87331
>gb|AC090868.4| Homo sapiens chromosome 15, clone RP11-795G3, complete sequence Length = 183890 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 gaagatgttgcctctggaag 404 |||||||||||||||||||| Sbjct: 125449 gaagatgttgcctctggaag 125468
>emb|BX248329.10| Zebrafish DNA sequence from clone CH211-206P14, complete sequence Length = 151789 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 atgttgcctctggaagtgaa 408 |||||||||||||||||||| Sbjct: 122429 atgttgcctctggaagtgaa 122448
>ref|NM_004438.3| Homo sapiens EPH receptor A4 (EPHA4), mRNA Length = 6364 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ttgctgttcaccaggatgtt 24 |||||||||||||||||||| Sbjct: 2312 ttgctgttcaccaggatgtt 2293
>gb|AY335759.1| Synthetic construct Homo sapiens EphA4 (EPHA4) mRNA, partial cds Length = 2961 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ttgctgttcaccaggatgtt 24 |||||||||||||||||||| Sbjct: 2270 ttgctgttcaccaggatgtt 2251
>gb|AC009269.6|AC009269 Homo sapiens chromosome 15, clone RP11-138H8, complete sequence Length = 172850 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 gaagatgttgcctctggaag 404 |||||||||||||||||||| Sbjct: 69063 gaagatgttgcctctggaag 69082
>gb|AC010899.8| Homo sapiens BAC clone RP11-543K1 from 2, complete sequence Length = 210232 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 ttgctgttcaccaggatgtt 24 |||||||||||||||||||| Sbjct: 125573 ttgctgttcaccaggatgtt 125592
>gb|AC007343.7| Homo sapiens chromosome 16 clone RP11-463J22, complete sequence Length = 186732 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 agcaaggaatggatgaggag 213 |||||||||||||||||||| Sbjct: 144165 agcaaggaatggatgaggag 144184
>gb|BC105002.1| Homo sapiens EPH receptor A4, mRNA (cDNA clone MGC:132662 IMAGE:8144005), complete cds Length = 3097 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ttgctgttcaccaggatgtt 24 |||||||||||||||||||| Sbjct: 2306 ttgctgttcaccaggatgtt 2287
>gb|BC105000.1| Homo sapiens EPH receptor A4, mRNA (cDNA clone MGC:132660 IMAGE:8144003), complete cds Length = 3097 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ttgctgttcaccaggatgtt 24 |||||||||||||||||||| Sbjct: 2306 ttgctgttcaccaggatgtt 2287
>gb|AC007544.4| Homo sapiens 12 BAC RP11-12D15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 119034 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 tacagtgcatcattttacccttgc 360 |||||||||| ||||||||||||| Sbjct: 46852 tacagtgcattattttacccttgc 46829
>gb|AE003670.5| Drosophila melanogaster chromosome 2L, section 79 of 83 of the complete sequence Length = 258711 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 aaaaaggagttcaacaaggc 335 |||||||||||||||||||| Sbjct: 45876 aaaaaggagttcaacaaggc 45895
>gb|AC005130.1|AC005130 Drosophila melanogaster, chromosome 2L, region 39C1-39D1, P1 clone DS01560, complete sequence Length = 84395 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 aaaaaggagttcaacaaggc 335 |||||||||||||||||||| Sbjct: 48585 aaaaaggagttcaacaaggc 48604
>gb|L36645.1|HUMRPTKC Homo sapiens receptor protein-tyrosine kinase (HEK8) mRNA, complete cds Length = 3107 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ttgctgttcaccaggatgtt 24 |||||||||||||||||||| Sbjct: 2303 ttgctgttcaccaggatgtt 2284 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,842,166 Number of Sequences: 3902068 Number of extensions: 3842166 Number of successful extensions: 71010 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 60 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70855 Number of HSP's gapped (non-prelim): 154 length of query: 463 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 441 effective length of database: 17,147,199,772 effective search space: 7561915099452 effective search space used: 7561915099452 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)