ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast47e09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT016666.1| Zea mays clone Contig499 mRNA sequence 541 e-151
2gb|AY103782.1| Zea mays PCO080860 mRNA sequence 541 e-151
3dbj|AK065295.1| Oryza sativa (japonica cultivar-group) cDNA clon... 496 e-137
4dbj|AK061892.1| Oryza sativa (japonica cultivar-group) cDNA clon... 488 e-135
5ref|NM_192395.1| Oryza sativa (japonica cultivar-group), predic... 299 4e-78
6dbj|AK072075.1| Oryza sativa (japonica cultivar-group) cDNA clon... 299 4e-78
7gb|BT009123.1| Triticum aestivum clone wl1n.pk0013.e12:fis, full... 268 1e-68
8gb|AY103707.1| Zea mays PCO072121 mRNA sequence 268 1e-68
9gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome... 172 7e-40
10dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 172 7e-40
11emb|X57073.1|SOAHRI S.oleracea AHRI mRNA for acetohydroxy acid r... 141 2e-30
12ref|NM_115723.2| Arabidopsis thaliana ketol-acid reductoisomeras... 135 1e-28
13gb|BT000822.1| Arabidopsis thaliana ketol-acid reductoisomerase ... 135 1e-28
14gb|BT000669.1| Arabidopsis thaliana clone RAFL07-09-M16 (R10765)... 135 1e-28
15gb|AY096556.1| Arabidopsis thaliana putative ketol-acid reductoi... 135 1e-28
16gb|AY065398.1| Arabidopsis thaliana putative ketol-acid reductoi... 135 1e-28
17gb|AF329500.1| Arabidopsis thaliana putative ketol-acid reductoi... 135 1e-28
18gb|AY062094.1| Arabidopsis thaliana AT3g58610/F14P22_200 mRNA, c... 135 1e-28
19dbj|AK221938.1| Arabidopsis thaliana mRNA for ketol-acid reducto... 135 1e-28
20gb|AF324671.2|AF324671 Arabidopsis thaliana AT3g58610 (AT3g58610... 135 1e-28
21emb|BX823796.1|CNS0A4R1 Arabidopsis thaliana Full-length cDNA Co... 135 1e-28
22emb|X68150.1|ATKARE A.thaliana mRNA for ketol-acid reductoisomer... 127 3e-26
23dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
24dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
25gb|BT016378.1| Zea mays clone Contig211 mRNA sequence 113 5e-22
26dbj|D21110.1|RICAD400 Oryza sativa mRNA for acetohydroxy acid re... 94 5e-16
27emb|Y17796.1|PSY17796 Pisum sativum mRNA for ketol-acid reductoi... 90 8e-15
28emb|AJ251333.1|PSA251333 Pisum sativum aair gene for acetohydrox... 84 5e-13
29gb|AC135231.23| Medicago truncatula clone mth2-28m10, complete s... 82 2e-12
30emb|X69880.1|ATAAI A.thaliana gene for acetohydroxy acid isomero... 74 4e-10
31emb|AL137082.1|ATF14P22 Arabidopsis thaliana DNA chromosome 3, B... 74 4e-10
32gb|DQ163261.1| Candidatus Hamiltonella defensa clone P040089 gen... 44 0.40
33gb|DQ163792.1| Candidatus Hamiltonella defensa clone P180035 gen... 44 0.40
34gb|AC163998.2| Mus musculus chromosome 15, clone RP24-326H11, co... 42 1.6
35emb|BX936312.12| Zebrafish DNA sequence from clone DKEY-204O5 in... 42 1.6
36emb|AL356295.9| Human DNA sequence from clone RP11-768P11 on chr... 42 1.6
37gb|AC087113.11| Mus Musculus Strain C57BL6/J Chromosome 15 BAC, ... 42 1.6
38emb|AL845434.11| Mouse DNA sequence from clone RP23-211O3 on chr... 42 1.6
39gb|AC007208.13| Drosophila melanogaster clone BACR05D08, complet... 40 6.2
40ref|XM_526042.1| PREDICTED: Pan troglodytes ephrin receptor EphA... 40 6.2
41gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 6.2
42gb|AC164536.5| Mus musculus chromosome 18, clone RP23-425H1, com... 40 6.2
43gb|AY232099.1| Drosophila yakuba clone yak-ad_CG11876 mRNA sequence 40 6.2
44emb|AL513165.12| Human DNA sequence from clone RP11-613M10 on ch... 40 6.2
45emb|AL391374.9| Human DNA sequence from clone RP11-631G24 on chr... 40 6.2
46gb|BC026327.1| Homo sapiens EPH receptor A4, mRNA (cDNA clone MG... 40 6.2
47gb|AC090858.6| Homo sapiens chromosome 11, clone RP11-676E14, co... 40 6.2
48gb|AC090868.4| Homo sapiens chromosome 15, clone RP11-795G3, com... 40 6.2
49emb|BX248329.10| Zebrafish DNA sequence from clone CH211-206P14,... 40 6.2
50ref|NM_004438.3| Homo sapiens EPH receptor A4 (EPHA4), mRNA 40 6.2
51gb|AY335759.1| Synthetic construct Homo sapiens EphA4 (EPHA4) mR... 40 6.2
52gb|AC009269.6|AC009269 Homo sapiens chromosome 15, clone RP11-13... 40 6.2
53gb|AC010899.8| Homo sapiens BAC clone RP11-543K1 from 2, complet... 40 6.2
54gb|AC007343.7| Homo sapiens chromosome 16 clone RP11-463J22, com... 40 6.2
55gb|BC105002.1| Homo sapiens EPH receptor A4, mRNA (cDNA clone MG... 40 6.2
56gb|BC105000.1| Homo sapiens EPH receptor A4, mRNA (cDNA clone MG... 40 6.2
57gb|AC007544.4| Homo sapiens 12 BAC RP11-12D15 (Roswell Park Canc... 40 6.2
58gb|AE003670.5| Drosophila melanogaster chromosome 2L, section 79... 40 6.2
59gb|AC005130.1|AC005130 Drosophila melanogaster, chromosome 2L, r... 40 6.2
60gb|L36645.1|HUMRPTKC Homo sapiens receptor protein-tyrosine kina... 40 6.2

>gb|BT016666.1| Zea mays clone Contig499 mRNA sequence
          Length = 1992

 Score =  541 bits (273), Expect = e-151
 Identities = 399/441 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    agctttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcg 60
            ||||||||||| |||||||||||||||||||||||||||||||||||| | | |||||| 
Sbjct: 812  agctttgctgtgcaccaggatgttgatggaagggcaactgatgttgctttagcatggtca 871

                                                                        
Query: 61   gttgcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgat 120
            |||||||| || ||||| ||||| |||||||||||| | |||||||||||||||||||||
Sbjct: 872  gttgcacttggttcccccttcacgtttgctactactttggaacaggagtacaagagtgat 931

                                                                        
Query: 121  atctttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgttt 180
            |||||||| |||||||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 932  atctttggagagcgaggcatcttgctgggtgctgtccatggtatcgtggaggctctgttt 991

                                                                        
Query: 181  aggagatacacagagcaaggaatggatgaggagtcggcatacaaaagcactgttgagggc 240
            ||||| |||||||| |||||||||||||| |||||||| ||||||| |||||| ||||||
Sbjct: 992  aggaggtacacagaacaaggaatggatgaagagtcggcctacaaaaacactgtcgagggc 1051

                                                                        
Query: 241  atcactggaatcatctcaaagaccatctcaaagaaggggatgcttgaggtatacaactcc 300
            || ||||| |||||||| || |||||||||||||| ||||||||||| || |||||||| 
Sbjct: 1052 ataactgggatcatctcgaaaaccatctcaaagaaagggatgcttgaagtgtacaactct 1111

                                                                        
Query: 301  ttgagcgcggaaggcaaaaaggagttcaacaaggcatacagtgcatcattttacccttgc 360
            ||||||| ||||||||||||||||||||||||||| || || ||||| |||||||| |||
Sbjct: 1112 ttgagcgaggaaggcaaaaaggagttcaacaaggcttatagcgcatcgttttacccgtgc 1171

                                                                        
Query: 361  atggacatcctctacgaatgctatgaagatgttgcctctggaagtgaaatcccgagtgtt 420
            ||||| || ||||||||||||||||||||||| ||||||||||||||||||| ||| || 
Sbjct: 1172 atggatatactctacgaatgctatgaagatgtggcctctggaagtgaaatccggagcgtg 1231

                                 
Query: 421  gtgttggctggtcggaggttt 441
            ||||||||||| |||||||||
Sbjct: 1232 gtgttggctgggcggaggttt 1252



to top

>gb|AY103782.1| Zea mays PCO080860 mRNA sequence
          Length = 2117

 Score =  541 bits (273), Expect = e-151
 Identities = 399/441 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    agctttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcg 60
            ||||||||||| |||||||||||||||||||||||||||||||||||| | | |||||| 
Sbjct: 904  agctttgctgtgcaccaggatgttgatggaagggcaactgatgttgctttagcatggtca 963

                                                                        
Query: 61   gttgcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgat 120
            |||||||| || ||||| ||||| |||||||||||| | |||||||||||||||||||||
Sbjct: 964  gttgcacttggttcccccttcacgtttgctactactttggaacaggagtacaagagtgat 1023

                                                                        
Query: 121  atctttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgttt 180
            |||||||| |||||||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 1024 atctttggagagcgaggcatcttgctgggtgctgtccatggtatcgtggaggctctgttt 1083

                                                                        
Query: 181  aggagatacacagagcaaggaatggatgaggagtcggcatacaaaagcactgttgagggc 240
            ||||| |||||||| |||||||||||||| |||||||| ||||||| |||||| ||||||
Sbjct: 1084 aggaggtacacagaacaaggaatggatgaagagtcggcctacaaaaacactgtcgagggc 1143

                                                                        
Query: 241  atcactggaatcatctcaaagaccatctcaaagaaggggatgcttgaggtatacaactcc 300
            || ||||| |||||||| || |||||||||||||| ||||||||||| || |||||||| 
Sbjct: 1144 ataactgggatcatctcgaaaaccatctcaaagaaagggatgcttgaagtgtacaactct 1203

                                                                        
Query: 301  ttgagcgcggaaggcaaaaaggagttcaacaaggcatacagtgcatcattttacccttgc 360
            ||||||| ||||||||||||||||||||||||||| || || ||||| |||||||| |||
Sbjct: 1204 ttgagcgaggaaggcaaaaaggagttcaacaaggcttatagcgcatcgttttacccatgc 1263

                                                                        
Query: 361  atggacatcctctacgaatgctatgaagatgttgcctctggaagtgaaatcccgagtgtt 420
            ||||| || ||||||||||||||||||||||| ||||||||||||||||||| ||| || 
Sbjct: 1264 atggatatactctacgaatgctatgaagatgtggcctctggaagtgaaatccggagcgtg 1323

                                 
Query: 421  gtgttggctggtcggaggttt 441
            ||||||||||| |||||||||
Sbjct: 1324 gtgttggctgggcggaggttt 1344



to top

>dbj|AK065295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N13, full
            insert sequence
          Length = 1983

 Score =  496 bits (250), Expect = e-137
 Identities = 388/434 (89%)
 Strand = Plus / Plus

                                                                        
Query: 4    tttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcggtt 63
            ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 840  tttgctgttcaccaggatgttgatggaagggcaactgatgttgctctaggatggtcagtt 899

                                                                        
Query: 64   gcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgatatc 123
            || || ||||| || ||||| |||||||||||  ||||||||||||||||||| ||||||
Sbjct: 900  gcgctgggatctcccttcacatttgctactaccttagaacaggagtacaagagcgatatc 959

                                                                        
Query: 124  tttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgtttagg 183
            |||||||||||||| ||| | || || ||||| |||||||||||||||||||||||||||
Sbjct: 960  tttggggagcgaggcattcttcttggagctgttcatggcatcgtggaggctctgtttagg 1019

                                                                        
Query: 184  agatacacagagcaaggaatggatgaggagtcggcatacaaaagcactgttgagggcatc 243
            |||||||||||||||||||||||||| ||   ||||||||||| ||| || |||||||||
Sbjct: 1020 agatacacagagcaaggaatggatgaagaaatggcatacaaaaacaccgtagagggcatc 1079

                                                                        
Query: 244  actggaatcatctcaaagaccatctcaaagaaggggatgcttgaggtatacaactccttg 303
            |||||||| ||||| || || |||||||||||||| |||||||| || ||||||||||||
Sbjct: 1080 actggaattatctcgaaaactatctcaaagaagggaatgcttgaagtgtacaactccttg 1139

                                                                        
Query: 304  agcgcggaaggcaaaaaggagttcaacaaggcatacagtgcatcattttacccttgcatg 363
            |  | ||| || || ||||| ||||||||||| |||||||||||||| || |||||||||
Sbjct: 1140 acagaggaggggaagaaggaattcaacaaggcctacagtgcatcattctatccttgcatg 1199

                                                                        
Query: 364  gacatcctctacgaatgctatgaagatgttgcctctggaagtgaaatcccgagtgttgtg 423
            ||||| ||||| || ||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 1200 gacatactctatgagtgctacgaagatgttgcctctggaagtgaaatccggagtgttgtg 1259

                          
Query: 424  ttggctggtcggag 437
            |||||||| |||||
Sbjct: 1260 ttggctggacggag 1273



to top

>dbj|AK061892.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-G05, full
           insert sequence
          Length = 1153

 Score =  488 bits (246), Expect = e-135
 Identities = 387/434 (89%)
 Strand = Plus / Plus

                                                                       
Query: 4   tttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcggtt 63
           ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 28  tttgctgttcaccaggatgttgatggaagggcaactgatgttgctctaggatggtcagtt 87

                                                                       
Query: 64  gcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgatatc 123
           || || ||||| || ||||| |||||||||||  ||||||||||||||||||| ||||||
Sbjct: 88  gcgctgggatctcccttcacatttgctactaccttagaacaggagtacaagagcgatatc 147

                                                                       
Query: 124 tttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgtttagg 183
           |||||||||||||| |||   || || ||||| |||||||||||||||||||||||||||
Sbjct: 148 tttggggagcgaggcattcctcttggagctgttcatggcatcgtggaggctctgtttagg 207

                                                                       
Query: 184 agatacacagagcaaggaatggatgaggagtcggcatacaaaagcactgttgagggcatc 243
           |||||||||||||||||||||||||| ||   ||||||||||| ||| || |||||||||
Sbjct: 208 agatacacagagcaaggaatggatgaagaaatggcatacaaaaacaccgtagagggcatc 267

                                                                       
Query: 244 actggaatcatctcaaagaccatctcaaagaaggggatgcttgaggtatacaactccttg 303
           |||||||| ||||| || || |||||||||||||| |||||||| || ||||||||||||
Sbjct: 268 actggaattatctcgaaaactatctcaaagaagggaatgcttgaagtgtacaactccttg 327

                                                                       
Query: 304 agcgcggaaggcaaaaaggagttcaacaaggcatacagtgcatcattttacccttgcatg 363
           |  | ||| || || ||||| ||||||||||| |||||||||||||| || |||||||||
Sbjct: 328 acagaggaggggaagaaggaattcaacaaggcctacagtgcatcattctatccttgcatg 387

                                                                       
Query: 364 gacatcctctacgaatgctatgaagatgttgcctctggaagtgaaatcccgagtgttgtg 423
           ||||| ||||| || ||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 388 gacatactctatgagtgctacgaagatgttgcctctggaagtgaaatccggagtgttgtg 447

                         
Query: 424 ttggctggtcggag 437
           |||||||| |||||
Sbjct: 448 ttggctggacggag 461



to top

>ref|NM_192395.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1746

 Score =  299 bits (151), Expect = 4e-78
 Identities = 361/431 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1    agctttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcg 60
            ||||||||||| |||||||||||||||||||| ||||| ||||| |||||||||||||| 
Sbjct: 781  agctttgctgtacaccaggatgttgatggaagagcaacagatgtcgctcttggatggtca 840

                                                                        
Query: 61   gttgcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgat 120
            ||||| ||||| || || ||||| ||||||||||||||||| |||||||||   || |||
Sbjct: 841  gttgctctaggttctcctttcacatttgctactactctagagcaggagtaccgaagcgat 900

                                                                        
Query: 121  atctttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgttt 180
            || ||||| |||||||| |||||||| || ||||| ||||| || ||||||||||| || 
Sbjct: 901  atttttggcgagcgaggtattttgcttggggctgtacatggtattgtggaggctcttttc 960

                                                                        
Query: 181  aggagatacacagagcaaggaatggatgaggagtcggcatacaaaagcactgttgagggc 240
            ||||||||||||||||| ||  |||||||||| || |||||||| | |||||||||| ||
Sbjct: 961  aggagatacacagagcatgggttggatgaggactcagcatacaagaacactgttgagtgc 1020

                                                                        
Query: 241  atcactggaatcatctcaaagaccatctcaaagaaggggatgcttgaggtatacaactcc 300
            ||||||||||||||||| || || || || || |||||||||||||| || ||||| || 
Sbjct: 1021 atcactggaatcatctctaaaactatttcgaaaaaggggatgcttgaagtgtacaattca 1080

                                                                        
Query: 301  ttgagcgcggaaggcaaaaaggagttcaacaaggcatacagtgcatcattttacccttgc 360
            ||||  |  ||||| || ||| | || | | |||| ||||||||| ||| ||| || |||
Sbjct: 1081 ttgacagaagaaggaaagaagcaatttatcgaggcttacagtgcagcatattatccatgc 1140

                                                                        
Query: 361  atggacatcctctacgaatgctatgaagatgttgcctctggaagtgaaatcccgagtgtt 420
            ||||| || || || |||||||||||||||||| | ||||||||||||||    ||||||
Sbjct: 1141 atggatatactatatgaatgctatgaagatgtttcttctggaagtgaaattagaagtgtt 1200

                       
Query: 421  gtgttggctgg 431
            || ||||||||
Sbjct: 1201 gttttggctgg 1211



to top

>dbj|AK072075.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013115K02, full
            insert sequence
          Length = 1917

 Score =  299 bits (151), Expect = 4e-78
 Identities = 361/431 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1    agctttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcg 60
            ||||||||||| |||||||||||||||||||| ||||| ||||| |||||||||||||| 
Sbjct: 732  agctttgctgtacaccaggatgttgatggaagagcaacagatgtcgctcttggatggtca 791

                                                                        
Query: 61   gttgcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgat 120
            ||||| ||||| || || ||||| ||||||||||||||||| |||||||||   || |||
Sbjct: 792  gttgctctaggttctcctttcacatttgctactactctagagcaggagtaccgaagcgat 851

                                                                        
Query: 121  atctttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgttt 180
            || ||||| |||||||| |||||||| || ||||| ||||| || ||||||||||| || 
Sbjct: 852  atttttggcgagcgaggtattttgcttggggctgtacatggtattgtggaggctcttttc 911

                                                                        
Query: 181  aggagatacacagagcaaggaatggatgaggagtcggcatacaaaagcactgttgagggc 240
            ||||||||||||||||| ||  |||||||||| || |||||||| | |||||||||| ||
Sbjct: 912  aggagatacacagagcatgggttggatgaggactcagcatacaagaacactgttgagtgc 971

                                                                        
Query: 241  atcactggaatcatctcaaagaccatctcaaagaaggggatgcttgaggtatacaactcc 300
            ||||||||||||||||| || || || || || |||||||||||||| || ||||| || 
Sbjct: 972  atcactggaatcatctctaaaactatttcgaaaaaggggatgcttgaagtgtacaattca 1031

                                                                        
Query: 301  ttgagcgcggaaggcaaaaaggagttcaacaaggcatacagtgcatcattttacccttgc 360
            ||||  |  ||||| || ||| | || | | |||| ||||||||| ||| ||| || |||
Sbjct: 1032 ttgacagaagaaggaaagaagcaatttatcgaggcttacagtgcagcatattatccatgc 1091

                                                                        
Query: 361  atggacatcctctacgaatgctatgaagatgttgcctctggaagtgaaatcccgagtgtt 420
            ||||| || || || |||||||||||||||||| | ||||||||||||||    ||||||
Sbjct: 1092 atggatatactatatgaatgctatgaagatgtttcttctggaagtgaaattagaagtgtt 1151

                       
Query: 421  gtgttggctgg 431
            || ||||||||
Sbjct: 1152 gttttggctgg 1162



to top

>gb|BT009123.1| Triticum aestivum clone wl1n.pk0013.e12:fis, full insert mRNA
            sequence
          Length = 1957

 Score =  268 bits (135), Expect = 1e-68
 Identities = 339/407 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1    agctttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcg 60
            |||||||||||||||||||||||||||||||||||||| ||||| ||||| || ||||| 
Sbjct: 807  agctttgctgttcaccaggatgttgatggaagggcaacagatgtagctctagggtggtca 866

                                                                        
Query: 61   gttgcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgat 120
            || ||  |||| || || ||||| ||||||||||||||||| |||||||||  |||||| 
Sbjct: 867  gtagctttaggttctcctttcacatttgctactactctagagcaggagtaccggagtgac 926

                                                                        
Query: 121  atctttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgttt 180
            || ||||| |||||||| |||||||| ||||||||||||||||| ||||||||||| || 
Sbjct: 927  atttttggcgagcgaggtattttgcttggtgctgtccatggcatggtggaggctcttttc 986

                                                                        
Query: 181  aggagatacacagagcaaggaatggatgaggagtcggcatacaaaagcactgttgagggc 240
            |||||||||||||| ||||||||||| ||||| || ||||| || |  ||||| ||| ||
Sbjct: 987  aggagatacacagaacaaggaatggacgaggactcagcatataagaatactgtagagagc 1046

                                                                        
Query: 241  atcactggaatcatctcaaagaccatctcaaagaaggggatgcttgaggtatacaactcc 300
            ||||||||||| || || || || || ||||||||||| |||||||| || || ||||||
Sbjct: 1047 atcactggaattatatcgaaaactatttcaaagaagggtatgcttgaagtgtataactcc 1106

                                                                        
Query: 301  ttgagcgcggaaggcaaaaaggagttcaacaaggcatacagtgcatcattttacccttgc 360
            ||||  |  ||||| || ||| |||| |   |||| || |||||| ||| |||||| |||
Sbjct: 1107 ttgactgaagaaggaaagaagcagtttattgaggcctatagtgcagcatattacccatgc 1166

                                                           
Query: 361  atggacatcctctacgaatgctatgaagatgttgcctctggaagtga 407
            ||||||||  | || || ||||||||||| ||  | |||||||||||
Sbjct: 1167 atggacatattgtatgagtgctatgaagacgtctcttctggaagtga 1213



to top

>gb|AY103707.1| Zea mays PCO072121 mRNA sequence
          Length = 1985

 Score =  268 bits (135), Expect = 1e-68
 Identities = 339/407 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1    agctttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcg 60
            |||||||||||||||||||||||||||||||||||||| ||||| ||||| || ||||| 
Sbjct: 818  agctttgctgttcaccaggatgttgatggaagggcaacagatgtagctctagggtggtca 877

                                                                        
Query: 61   gttgcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgat 120
            || ||  |||| || || ||||| ||||||||||||||||| |||||||||  |||||| 
Sbjct: 878  gtagctttaggttctcctttcacatttgctactactctagagcaggagtaccggagtgac 937

                                                                        
Query: 121  atctttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgttt 180
            || ||||| |||||||| |||||||| ||||||||||||||||| ||||||||||| || 
Sbjct: 938  atttttggcgagcgaggtattttgcttggtgctgtccatggcatggtggaggctcttttc 997

                                                                        
Query: 181  aggagatacacagagcaaggaatggatgaggagtcggcatacaaaagcactgttgagggc 240
            |||||||||||||| ||||||||||| ||||| || ||||| || |  ||||| ||| ||
Sbjct: 998  aggagatacacagaacaaggaatggacgaggactcagcatataagaatactgtagagagc 1057

                                                                        
Query: 241  atcactggaatcatctcaaagaccatctcaaagaaggggatgcttgaggtatacaactcc 300
            ||||||||||| || || || || || ||||||||||| |||||||| || || ||||||
Sbjct: 1058 atcactggaattatatcgaaaactatttcaaagaagggtatgcttgaagtgtataactcc 1117

                                                                        
Query: 301  ttgagcgcggaaggcaaaaaggagttcaacaaggcatacagtgcatcattttacccttgc 360
            ||||  |  ||||| || ||| |||| |   |||| || |||||| ||| |||||| |||
Sbjct: 1118 ttgactgaagaaggaaagaagcagtttattgaggcctatagtgcagcatattacccatgc 1177

                                                           
Query: 361  atggacatcctctacgaatgctatgaagatgttgcctctggaagtga 407
            ||||||||  | || || ||||||||||| ||  | |||||||||||
Sbjct: 1178 atggacatattgtatgagtgctatgaagacgtctcttctggaagtga 1224



to top

>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10,
              complete sequence
          Length = 187034

 Score =  172 bits (87), Expect = 7e-40
 Identities = 144/163 (88%)
 Strand = Plus / Minus

                                                                          
Query: 275    aggggatgcttgaggtatacaactccttgagcgcggaaggcaaaaaggagttcaacaagg 334
              |||| |||||||| || |||||||||||||  | ||| || || ||||| ||||||||||
Sbjct: 144255 agggaatgcttgaagtgtacaactccttgacagaggaggggaagaaggaattcaacaagg 144196

                                                                          
Query: 335    catacagtgcatcattttacccttgcatggacatcctctacgaatgctatgaagatgttg 394
              | |||||||||||||| || |||||||||||||| ||||| || ||||| ||||||||||
Sbjct: 144195 cctacagtgcatcattctatccttgcatggacatactctatgagtgctacgaagatgttg 144136

                                                         
Query: 395    cctctggaagtgaaatcccgagtgttgtgttggctggtcggag 437
              |||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 144135 cctctggaagtgaaatccggagtgttgtgttggctggacggag 144093



 Score =  163 bits (82), Expect = 6e-37
 Identities = 112/122 (91%)
 Strand = Plus / Minus

                                                                          
Query: 16     caggatgttgatggaagggcaactgatgttgctcttggatggtcggttgcactaggatcc 75
              ||||||||||||||||||||||||||||||||||| |||||||| ||||| || ||||| 
Sbjct: 144650 caggatgttgatggaagggcaactgatgttgctctaggatggtcagttgcgctgggatct 144591

                                                                          
Query: 76     ccgttcacctttgctactactctagaacaggagtacaagagtgatatctttggggagcga 135
              || ||||| |||||||||||  ||||||||||||||||||| ||||||||||||||||||
Sbjct: 144590 cccttcacatttgctactaccttagaacaggagtacaagagcgatatctttggggagcga 144531

                
Query: 136    gg 137
              ||
Sbjct: 144530 gg 144529



 Score =  157 bits (79), Expect = 4e-35
 Identities = 115/127 (90%)
 Strand = Plus / Minus

                                                                          
Query: 151    gctgtccatggcatcgtggaggctctgtttaggagatacacagagcaaggaatggatgag 210
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 144449 gctgttcatggcatcgtggaggctctgtttaggagatacacagagcaaggaatggatgaa 144390

                                                                          
Query: 211    gagtcggcatacaaaagcactgttgagggcatcactggaatcatctcaaagaccatctca 270
              ||   ||||||||||| ||| || ||||||||||||||||| ||||| || || ||||||
Sbjct: 144389 gaaatggcatacaaaaacaccgtagagggcatcactggaattatctcgaaaactatctca 144330

                     
Query: 271    aagaagg 277
              |||||||
Sbjct: 144329 aagaagg 144323



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  172 bits (87), Expect = 7e-40
 Identities = 144/163 (88%)
 Strand = Plus / Minus

                                                                            
Query: 275      aggggatgcttgaggtatacaactccttgagcgcggaaggcaaaaaggagttcaacaagg 334
                |||| |||||||| || |||||||||||||  | ||| || || ||||| ||||||||||
Sbjct: 28360013 agggaatgcttgaagtgtacaactccttgacagaggaggggaagaaggaattcaacaagg 28359954

                                                                            
Query: 335      catacagtgcatcattttacccttgcatggacatcctctacgaatgctatgaagatgttg 394
                | |||||||||||||| || |||||||||||||| ||||| || ||||| ||||||||||
Sbjct: 28359953 cctacagtgcatcattctatccttgcatggacatactctatgagtgctacgaagatgttg 28359894

                                                           
Query: 395      cctctggaagtgaaatcccgagtgttgtgttggctggtcggag 437
                |||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 28359893 cctctggaagtgaaatccggagtgttgtgttggctggacggag 28359851



 Score =  163 bits (82), Expect = 6e-37
 Identities = 112/122 (91%)
 Strand = Plus / Minus

                                                                            
Query: 16       caggatgttgatggaagggcaactgatgttgctcttggatggtcggttgcactaggatcc 75
                ||||||||||||||||||||||||||||||||||| |||||||| ||||| || ||||| 
Sbjct: 28360408 caggatgttgatggaagggcaactgatgttgctctaggatggtcagttgcgctgggatct 28360349

                                                                            
Query: 76       ccgttcacctttgctactactctagaacaggagtacaagagtgatatctttggggagcga 135
                || ||||| |||||||||||  ||||||||||||||||||| ||||||||||||||||||
Sbjct: 28360348 cccttcacatttgctactaccttagaacaggagtacaagagcgatatctttggggagcga 28360289

                  
Query: 136      gg 137
                ||
Sbjct: 28360288 gg 28360287



 Score =  157 bits (79), Expect = 4e-35
 Identities = 115/127 (90%)
 Strand = Plus / Minus

                                                                            
Query: 151      gctgtccatggcatcgtggaggctctgtttaggagatacacagagcaaggaatggatgag 210
                ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 28360207 gctgttcatggcatcgtggaggctctgtttaggagatacacagagcaaggaatggatgaa 28360148

                                                                            
Query: 211      gagtcggcatacaaaagcactgttgagggcatcactggaatcatctcaaagaccatctca 270
                ||   ||||||||||| ||| || ||||||||||||||||| ||||| || || ||||||
Sbjct: 28360147 gaaatggcatacaaaaacaccgtagagggcatcactggaattatctcgaaaactatctca 28360088

                       
Query: 271      aagaagg 277
                |||||||
Sbjct: 28360087 aagaagg 28360081



to top

>emb|X57073.1|SOAHRI S.oleracea AHRI mRNA for acetohydroxy acid reductoisomerase
          Length = 2050

 Score =  141 bits (71), Expect = 2e-30
 Identities = 134/155 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1    agctttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcg 60
            ||||||||||||||||||||||||||||| ||||| || ||||| || ||||| ||||| 
Sbjct: 854  agctttgctgttcaccaggatgttgatggtagggctacagatgtagcacttggctggtca 913

                                                                        
Query: 61   gttgcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgat 120
             |||| || ||||| || ||||| |||||||||||||| || ||||| || |||||||| 
Sbjct: 914  attgctcttggatctcctttcacatttgctactactcttgagcaggaatataagagtgac 973

                                               
Query: 121  atctttggggagcgaggaattttgctgggtgctgt 155
            ||||||||||||||||| || ||||| ||||||||
Sbjct: 974  atctttggggagcgaggtatcttgcttggtgctgt 1008



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 160/204 (78%)
 Strand = Plus / Plus

                                                                        
Query: 228  cactgttgagggcatcactggaatcatctcaaagaccatctcaaagaaggggatgcttga 287
            |||||||||| ||||||||||  |||| ||||||||||| ||||  ||||| ||||||| 
Sbjct: 1081 cactgttgagtgcatcactggtgtcatatcaaagaccatatcaacaaagggaatgcttgc 1140

                                                                        
Query: 288  ggtatacaactccttgagcgcggaaggcaaaaaggagttcaacaaggcatacagtgcatc 347
              | ||||| || |||   |  |||||||||||||| ||| |    || ||||| || ||
Sbjct: 1141 cttgtacaattctttgtcagaagaaggcaaaaaggacttccaagctgcttacagcgcctc 1200

                                                                        
Query: 348  attttacccttgcatggacatcctctacgaatgctatgaagatgttgcctctggaagtga 407
            ||  |||||||  ||||||||  | ||||| |||||||||||||||||   ||| |||||
Sbjct: 1201 atactacccttcaatggacattttgtacgagtgctatgaagatgttgctagtggtagtga 1260

                                    
Query: 408  aatcccgagtgttgtgttggctgg 431
             ||||  |||||||| ||||||||
Sbjct: 1261 gatccgaagtgttgttttggctgg 1284



to top

>ref|NM_115723.2| Arabidopsis thaliana ketol-acid reductoisomerase AT3G58610 mRNA,
            complete cds
          Length = 2087

 Score =  135 bits (68), Expect = 1e-28
 Identities = 158/188 (84%)
 Strand = Plus / Plus

                                                                        
Query: 4    tttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcggtt 63
            ||||| || |||||||||||||| || || ||  | ||||||||  | |||||||| || 
Sbjct: 920  tttgcagtccaccaggatgttgacggtagagccgccgatgttgcattgggatggtcagta 979

                                                                        
Query: 64   gcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgatatc 123
            ||||| || || ||||| || |||||||||||||| ||||||||||||| |||||| |||
Sbjct: 980  gcacttggttctccgtttacttttgctactactcttgaacaggagtacaggagtgacatc 1039

                                                                        
Query: 124  tttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgtttagg 183
            ||||| ||  ||||||||||||| |||||||| || || ||||||||| |||||||||| 
Sbjct: 1040 tttggagaaagaggaattttgcttggtgctgttcacggaatcgtggagtctctgtttaga 1099

                    
Query: 184  agatacac 191
            ||||||||
Sbjct: 1100 agatacac 1107



to top

>gb|BT000822.1| Arabidopsis thaliana ketol-acid reductoisomerase
           (At3g58610/F14P22_200) mRNA, complete cds
          Length = 1776

 Score =  135 bits (68), Expect = 1e-28
 Identities = 158/188 (84%)
 Strand = Plus / Plus

                                                                       
Query: 4   tttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcggtt 63
           ||||| || |||||||||||||| || || ||  | ||||||||  | |||||||| || 
Sbjct: 811 tttgcagtccaccaggatgttgacggtagagccgccgatgttgcattgggatggtcagta 870

                                                                       
Query: 64  gcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgatatc 123
           ||||| || || ||||| || |||||||||||||| ||||||||||||| |||||| |||
Sbjct: 871 gcacttggttctccgtttacttttgctactactcttgaacaggagtacaggagtgacatc 930

                                                                       
Query: 124 tttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgtttagg 183
           ||||| ||  ||||||||||||| |||||||| || || ||||||||| |||||||||| 
Sbjct: 931 tttggagaaagaggaattttgcttggtgctgttcacggaatcgtggagtctctgtttaga 990

                   
Query: 184 agatacac 191
           ||||||||
Sbjct: 991 agatacac 998



to top

>gb|BT000669.1| Arabidopsis thaliana clone RAFL07-09-M16 (R10765) putative ketol-acid
            reductoisomerase (At3g58610) mRNA, complete cds
          Length = 2028

 Score =  135 bits (68), Expect = 1e-28
 Identities = 158/188 (84%)
 Strand = Plus / Plus

                                                                        
Query: 4    tttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcggtt 63
            ||||| || |||||||||||||| || || ||  | ||||||||  | |||||||| || 
Sbjct: 861  tttgcagtccaccaggatgttgacggtagagccgccgatgttgcattgggatggtcagta 920

                                                                        
Query: 64   gcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgatatc 123
            ||||| || || ||||| || |||||||||||||| ||||||||||||| |||||| |||
Sbjct: 921  gcacttggttctccgtttacttttgctactactcttgaacaggagtacaggagtgacatc 980

                                                                        
Query: 124  tttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgtttagg 183
            ||||| ||  ||||||||||||| |||||||| || || ||||||||| |||||||||| 
Sbjct: 981  tttggagaaagaggaattttgcttggtgctgttcacggaatcgtggagtctctgtttaga 1040

                    
Query: 184  agatacac 191
            ||||||||
Sbjct: 1041 agatacac 1048



to top

>gb|AY096556.1| Arabidopsis thaliana putative ketol-acid reductoisomerase
           (At3g58610) mRNA, complete cds
          Length = 1807

 Score =  135 bits (68), Expect = 1e-28
 Identities = 158/188 (84%)
 Strand = Plus / Plus

                                                                       
Query: 4   tttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcggtt 63
           ||||| || |||||||||||||| || || ||  | ||||||||  | |||||||| || 
Sbjct: 811 tttgcagtccaccaggatgttgacggtagagccgccgatgttgcattgggatggtcagta 870

                                                                       
Query: 64  gcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgatatc 123
           ||||| || || ||||| || |||||||||||||| ||||||||||||| |||||| |||
Sbjct: 871 gcacttggttctccgtttacttttgctactactcttgaacaggagtacaggagtgacatc 930

                                                                       
Query: 124 tttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgtttagg 183
           ||||| ||  ||||||||||||| |||||||| || || ||||||||| |||||||||| 
Sbjct: 931 tttggagaaagaggaattttgcttggtgctgttcacggaatcgtggagtctctgtttaga 990

                   
Query: 184 agatacac 191
           ||||||||
Sbjct: 991 agatacac 998



to top

>gb|AY065398.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610)
            mRNA, complete cds
          Length = 2058

 Score =  135 bits (68), Expect = 1e-28
 Identities = 158/188 (84%)
 Strand = Plus / Plus

                                                                        
Query: 4    tttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcggtt 63
            ||||| || |||||||||||||| || || ||  | ||||||||  | |||||||| || 
Sbjct: 920  tttgcagtccaccaggatgttgacggtagagccgccgatgttgcattgggatggtcagta 979

                                                                        
Query: 64   gcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgatatc 123
            ||||| || || ||||| || |||||||||||||| ||||||||||||| |||||| |||
Sbjct: 980  gcacttggttctccgtttacttttgctactactcttgaacaggagtacaggagtgacatc 1039

                                                                        
Query: 124  tttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgtttagg 183
            ||||| ||  ||||||||||||| |||||||| || || ||||||||| |||||||||| 
Sbjct: 1040 tttggagaaagaggaattttgcttggtgctgttcacggaatcgtggagtctctgtttaga 1099

                    
Query: 184  agatacac 191
            ||||||||
Sbjct: 1100 agatacac 1107



to top

>gb|AF329500.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610)
            mRNA, complete cds
          Length = 1996

 Score =  135 bits (68), Expect = 1e-28
 Identities = 158/188 (84%)
 Strand = Plus / Plus

                                                                        
Query: 4    tttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcggtt 63
            ||||| || |||||||||||||| || || ||  | ||||||||  | |||||||| || 
Sbjct: 857  tttgcagtccaccaggatgttgacggtagagccgccgatgttgcattgggatggtcagta 916

                                                                        
Query: 64   gcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgatatc 123
            ||||| || || ||||| || |||||||||||||| ||||||||||||| |||||| |||
Sbjct: 917  gcacttggttctccgtttacttttgctactactcttgaacaggagtacaggagtgacatc 976

                                                                        
Query: 124  tttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgtttagg 183
            ||||| ||  ||||||||||||| |||||||| || || ||||||||| |||||||||| 
Sbjct: 977  tttggagaaagaggaattttgcttggtgctgttcacggaatcgtggagtctctgtttaga 1036

                    
Query: 184  agatacac 191
            ||||||||
Sbjct: 1037 agatacac 1044



to top

>gb|AY062094.1| Arabidopsis thaliana AT3g58610/F14P22_200 mRNA, complete cds
          Length = 1990

 Score =  135 bits (68), Expect = 1e-28
 Identities = 158/188 (84%)
 Strand = Plus / Plus

                                                                        
Query: 4    tttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcggtt 63
            ||||| || |||||||||||||| || || ||  | ||||||||  | |||||||| || 
Sbjct: 855  tttgcagtccaccaggatgttgacggtagagccgccgatgttgcattgggatggtcagta 914

                                                                        
Query: 64   gcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgatatc 123
            ||||| || || ||||| || |||||||||||||| ||||||||||||| |||||| |||
Sbjct: 915  gcacttggttctccgtttacttttgctactactcttgaacaggagtacaggagtgacatc 974

                                                                        
Query: 124  tttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgtttagg 183
            ||||| ||  ||||||||||||| |||||||| || || ||||||||| |||||||||| 
Sbjct: 975  tttggagaaagaggaattttgcttggtgctgttcacggaatcgtggagtctctgtttaga 1034

                    
Query: 184  agatacac 191
            ||||||||
Sbjct: 1035 agatacac 1042



to top

>dbj|AK221938.1| Arabidopsis thaliana mRNA for ketol-acid reductoisomerase, complete
           cds, clone: RAFL22-45-C07
          Length = 1266

 Score =  135 bits (68), Expect = 1e-28
 Identities = 158/188 (84%)
 Strand = Plus / Plus

                                                                       
Query: 4   tttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcggtt 63
           ||||| || |||||||||||||| || || ||  | ||||||||  | |||||||| || 
Sbjct: 133 tttgcagtccaccaggatgttgacggtagagccgccgatgttgcattgggatggtcagta 192

                                                                       
Query: 64  gcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgatatc 123
           ||||| || || ||||| || |||||||||||||| ||||||||||||| |||||| |||
Sbjct: 193 gcacttggttctccgtttacttttgctactactcttgaacaggagtacaggagtgacatc 252

                                                                       
Query: 124 tttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgtttagg 183
           ||||| ||  ||||||||||||| |||||||| || || ||||||||| |||||||||| 
Sbjct: 253 tttggagaaagaggaattttgcttggtgctgttcacggaatcgtggagtctctgtttaga 312

                   
Query: 184 agatacac 191
           ||||||||
Sbjct: 313 agatacac 320



to top

>gb|AF324671.2|AF324671 Arabidopsis thaliana AT3g58610 (AT3g58610/F14P22_200) mRNA, complete
            cds
          Length = 1980

 Score =  135 bits (68), Expect = 1e-28
 Identities = 158/188 (84%)
 Strand = Plus / Plus

                                                                        
Query: 4    tttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcggtt 63
            ||||| || |||||||||||||| || || ||  | ||||||||  | |||||||| || 
Sbjct: 857  tttgcagtccaccaggatgttgacggtagagccgccgatgttgcattgggatggtcagta 916

                                                                        
Query: 64   gcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgatatc 123
            ||||| || || ||||| || |||||||||||||| ||||||||||||| |||||| |||
Sbjct: 917  gcacttggttctccgtttacttttgctactactcttgaacaggagtacaggagtgacatc 976

                                                                        
Query: 124  tttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgtttagg 183
            ||||| ||  ||||||||||||| |||||||| || || ||||||||| |||||||||| 
Sbjct: 977  tttggagaaagaggaattttgcttggtgctgttcacggaatcgtggagtctctgtttaga 1036

                    
Query: 184  agatacac 191
            ||||||||
Sbjct: 1037 agatacac 1044



to top

>emb|BX823796.1|CNS0A4R1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS76ZD11 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1983

 Score =  135 bits (68), Expect = 1e-28
 Identities = 158/188 (84%)
 Strand = Plus / Plus

                                                                        
Query: 4    tttgctgttcaccaggatgttgatggaagggcaactgatgttgctcttggatggtcggtt 63
            ||||| || |||||||||||||| || || ||  | ||||||||  | |||||||| || 
Sbjct: 871  tttgcagtccaccaggatgttgacggtagagccgccgatgttgcattgggatggtcagta 930

                                                                        
Query: 64   gcactaggatccccgttcacctttgctactactctagaacaggagtacaagagtgatatc 123
            ||||| || || ||||| || |||||||||||||| ||||||||||||| |||||| |||
Sbjct: 931  gcacttggttctccgtttacttttgctactactcttgaacaggagtacaggagtgacatc 990

                                                                        
Query: 124  tttggggagcgaggaattttgctgggtgctgtccatggcatcgtggaggctctgtttagg 183
            ||||| ||  ||||||||||||| |||||||| || || ||||||||| |||||||||| 
Sbjct: 991  tttggagaaagaggaattttgcttggtgctgttcacggaatcgtggagtctctgtttaga 1050

                    
Query: 184  agatacac 191
            ||||||||
Sbjct: 1051 agatacac 1058



to top

>emb|X68150.1|ATKARE A.thaliana mRNA for ketol-acid reductoisomerase subunit
          Length = 1966

 Score =  127 bits (64), Expect = 3e-26
 Identities = 121/140 (86%)
 Strand = Plus / Plus

                                                                        
Query: 52   ggatggtcggttgcactaggatccccgttcacctttgctactactctagaacaggagtac 111
            |||||||| || ||||| || || ||||| || |||||||||||||| ||||||||||||
Sbjct: 883  ggatggtcagtagcacttggttctccgtttacttttgctactactcttgaacaggagtac 942

                                                                        
Query: 112  aagagtgatatctttggggagcgaggaattttgctgggtgctgtccatggcatcgtggag 171
            | |||||| |||||||| ||  ||||||||||||| |||||||| || || |||||||||
Sbjct: 943  aggagtgacatctttggagaaagaggaattttgcttggtgctgttcacggaatcgtggag 1002

                                
Query: 172  gctctgtttaggagatacac 191
             |||||||||| ||||||||
Sbjct: 1003 tctctgtttagaagatacac 1022



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  117 bits (59), Expect = 3e-23
 Identities = 104/119 (87%)
 Strand = Plus / Plus

                                                                            
Query: 139      attttgctgggtgctgtccatggcatcgtggaggctctgtttaggagatacacagagcaa 198
                |||||||| || ||||| ||||| || ||||||||||| || ||||||||||||||||| 
Sbjct: 26387995 attttgcttggggctgtacatggtattgtggaggctcttttcaggagatacacagagcat 26388054

                                                                           
Query: 199      ggaatggatgaggagtcggcatacaaaagcactgttgagggcatcactggaatcatctc 257
                ||  |||||||||| || |||||||| | |||||||||| |||||||||||||||||||
Sbjct: 26388055 gggttggatgaggactcagcatacaagaacactgttgagtgcatcactggaatcatctc 26388113



 Score =  115 bits (58), Expect = 1e-22
 Identities = 106/122 (86%)
 Strand = Plus / Plus

                                                                            
Query: 16       caggatgttgatggaagggcaactgatgttgctcttggatggtcggttgcactaggatcc 75
                ||||||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||| || 
Sbjct: 26387805 caggatgttgatggaagagcaacagatgtcgctcttggatggtcagttgctctaggttct 26387864

                                                                            
Query: 76       ccgttcacctttgctactactctagaacaggagtacaagagtgatatctttggggagcga 135
                || ||||| ||||||||||||||||| |||||||||   || ||||| ||||| ||||||
Sbjct: 26387865 cctttcacatttgctactactctagagcaggagtaccgaagcgatatttttggcgagcga 26387924

                  
Query: 136      gg 137
                ||
Sbjct: 26387925 gg 26387926



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                            
Query: 332      aggcatacagtgcatcattttacccttgcatggacatcctctacgaatgctatgaagatg 391
                |||| ||||||||| ||| ||| || |||||||| || || || ||||||||||||||||
Sbjct: 26388314 aggcttacagtgcagcatattatccatgcatggatatactatatgaatgctatgaagatg 26388373

                                                        
Query: 392      ttgcctctggaagtgaaatcccgagtgttgtgttggctgg 431
                || | ||||||||||||||    |||||||| ||||||||
Sbjct: 26388374 tttcttctggaagtgaaattagaagtgttgttttggctgg 26388413



to top

>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0032K15
          Length = 126195

 Score =  117 bits (59), Expect = 3e-23
 Identities = 104/119 (87%)
 Strand = Plus / Plus

                                                                         
Query: 139   attttgctgggtgctgtccatggcatcgtggaggctctgtttaggagatacacagagcaa 198
             |||||||| || ||||| ||||| || ||||||||||| || ||||||||||||||||| 
Sbjct: 61860 attttgcttggggctgtacatggtattgtggaggctcttttcaggagatacacagagcat 61919

                                                                        
Query: 199   ggaatggatgaggagtcggcatacaaaagcactgttgagggcatcactggaatcatctc 257
             ||  |||||||||| || |||||||| | |||||||||| |||||||||||||||||||
Sbjct: 61920 gggttggatgaggactcagcatacaagaacactgttgagtgcatcactggaatcatctc 61978



 Score =  115 bits (58), Expect = 1e-22
 Identities = 106/122 (86%)
 Strand = Plus / Plus

                                                                         
Query: 16    caggatgttgatggaagggcaactgatgttgctcttggatggtcggttgcactaggatcc 75
             ||||||||||||||||| ||||| ||||| |||||||||||||| ||||| ||||| || 
Sbjct: 61670 caggatgttgatggaagagcaacagatgtcgctcttggatggtcagttgctctaggttct 61729

                                                                         
Query: 76    ccgttcacctttgctactactctagaacaggagtacaagagtgatatctttggggagcga 135
             || ||||| ||||||||||||||||| |||||||||   || ||||| ||||| ||||||
Sbjct: 61730 cctttcacatttgctactactctagagcaggagtaccgaagcgatatttttggcgagcga 61789

               
Query: 136   gg 137
             ||
Sbjct: 61790 gg 61791



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 84/100 (84%)
 Strand = Plus / Plus

                                                                         
Query: 332   aggcatacagtgcatcattttacccttgcatggacatcctctacgaatgctatgaagatg 391
             |||| ||||||||| ||| ||| || |||||||| || || || ||||||||||||||||
Sbjct: 62179 aggcttacagtgcagcatattatccatgcatggatatactatatgaatgctatgaagatg 62238

                                                     
Query: 392   ttgcctctggaagtgaaatcccgagtgttgtgttggctgg 431
             || | ||||||||||||||    |||||||| ||||||||
Sbjct: 62239 tttcttctggaagtgaaattagaagtgttgttttggctgg 62278



to top

>gb|BT016378.1| Zea mays clone Contig211 mRNA sequence
          Length = 1029

 Score =  113 bits (57), Expect = 5e-22
 Identities = 207/257 (80%)
 Strand = Plus / Plus

                                                                       
Query: 151 gctgtccatggcatcgtggaggctctgtttaggagatacacagagcaaggaatggatgag 210
           |||||||||||||| ||||||||||| || |||||||||||||| ||||||||||| |||
Sbjct: 8   gctgtccatggcatggtggaggctcttttcaggagatacacagaacaaggaatggacgag 67

                                                                       
Query: 211 gagtcggcatacaaaagcactgttgagggcatcactggaatcatctcaaagaccatctca 270
           || || ||||| || |  ||||| ||| ||||||||||||| || || || || || |||
Sbjct: 68  gactcagcatataagaatactgtagagagcatcactggaattatatcgaaaactatttca 127

                                                                       
Query: 271 aagaaggggatgcttgaggtatacaactccttgagcgcggaaggcaaaaaggagttcaac 330
           |||||||| |||||||| || || |||||  |||  |  ||||| || ||| |||| |  
Sbjct: 128 aagaagggtatgcttgaagtgtataactctctgactgaagaaggaaagaagcagtttatt 187

                                                                       
Query: 331 aaggcatacagtgcatcattttacccttgcatggacatcctctacgaatgctatgaagat 390
            |||| || |||||| ||| |||||| |||||||||||  | || || ||||||||||| 
Sbjct: 188 gaggcctatagtgcagcatattacccatgcatggacatattgtatgagtgctatgaagac 247

                            
Query: 391 gttgcctctggaagtga 407
           ||  | |||||||||||
Sbjct: 248 gtctcttctggaagtga 264



to top

>dbj|D21110.1|RICAD400 Oryza sativa mRNA for acetohydroxy acid reductoisomerase, partial
           sequence
          Length = 376

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 182/229 (79%)
 Strand = Plus / Minus

                                                                       
Query: 203 tggatgaggagtcggcatacaaaagcactgttgagggcatcactggaatcatctcaaaga 262
           ||||| |||| || |||||||| | |||||||||| ||||||| |||| |||||| || |
Sbjct: 324 tggatnaggactcagcatacaagaacactgttgagtgcatcacnggaancatctctaaaa 265

                                                                       
Query: 263 ccatctcaaagaaggggatgcttgaggtatacaactccttgagcgcggaaggcaaaaagg 322
           | ||  | || |||||||||||||| || ||||| || ||||  |  ||||| || ||| 
Sbjct: 264 ctattncgaaaaaggggatgcttgaagtgtacaattcattgacagaagaaggaaagaagc 205

                                                                       
Query: 323 agttcaacaaggcatacagtgcatcattttacccttgcatggacatcctctacgaatgct 382
           | || | | |||| ||||||||| ||| ||| || |||||||| || || || |||||||
Sbjct: 204 aatttancgaggcttacagtgcagcatattatccatgcatggatatactatatgaatgct 145

                                                            
Query: 383 atgaagatgttgcctctggaagtgaaatcccgagtgttgtgttggctgg 431
           ||||||||||| | ||||||||| ||||    |||||||| ||||||||
Sbjct: 144 atgaagatgtttcttctggaagtnaaattagaagtgttgttttggctgg 96



to top

>emb|Y17796.1|PSY17796 Pisum sativum mRNA for ketol-acid reductoisomerase
          Length = 2036

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 123/149 (82%)
 Strand = Plus / Plus

                                                                       
Query: 13  caccaggatgttgatggaagggcaactgatgttgctcttggatggtcggttgcactagga 72
           ||||||||||| ||||| ||||| ||| |||||||| | || ||||| ||||| || || 
Sbjct: 796 caccaggatgtggatggcagggctactaatgttgctttggggtggtctgttgcccttggt 855

                                                                       
Query: 73  tccccgttcacctttgctactactctagaacaggagtacaagagtgatatctttggggag 132
           || || ||||| ||||| |||||  |||| || || ||||||||||| || ||||| |||
Sbjct: 856 tctcctttcacatttgccactacattagagcaagaatacaagagtgacatttttggagag 915

                                        
Query: 133 cgaggaattttgctgggtgctgtccatgg 161
            |||||||||| ||||||||||| |||||
Sbjct: 916 agaggaattttactgggtgctgttcatgg 944



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 81/101 (80%)
 Strand = Plus / Plus

                                                                        
Query: 334  gcatacagtgcatcattttacccttgcatggacatcctctacgaatgctatgaagatgtt 393
            ||||||||||| || ||||| || |||||||| ||  | || || |||||||| ||||| 
Sbjct: 1117 gcatacagtgcttccttttatccctgcatggaaattttgtatgagtgctatgaggatgta 1176

                                                     
Query: 394  gcctctggaagtgaaatcccgagtgttgtgttggctggtcg 434
            |||  ||| ||||| || |  |||||||| |||||||||||
Sbjct: 1177 gccagtggtagtgagattcgcagtgttgttttggctggtcg 1217



to top

>emb|AJ251333.1|PSA251333 Pisum sativum aair gene for acetohydroxy acid isomeroreductase, exons
            1-9
          Length = 3343

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 120/146 (82%)
 Strand = Plus / Plus

                                                                        
Query: 16   caggatgttgatggaagggcaactgatgttgctcttggatggtcggttgcactaggatcc 75
            |||||||| ||||| ||||| ||| |||||||| | || ||||| ||||| || || || 
Sbjct: 1830 caggatgtggatggcagggctactaatgttgctttggggtggtctgttgcccttggttct 1889

                                                                        
Query: 76   ccgttcacctttgctactactctagaacaggagtacaagagtgatatctttggggagcga 135
            || ||||| ||||| |||||  |||| || || ||||||||||| || ||||| ||| ||
Sbjct: 1890 cctttcacatttgccactacattagagcaagaatacaagagtgacatttttggagagaga 1949

                                      
Query: 136  ggaattttgctgggtgctgtccatgg 161
            |||||||| ||||||||||| |||||
Sbjct: 1950 ggaattttactgggtgctgttcatgg 1975



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 81/101 (80%)
 Strand = Plus / Plus

                                                                        
Query: 334  gcatacagtgcatcattttacccttgcatggacatcctctacgaatgctatgaagatgtt 393
            ||||||||||| || ||||| || |||||||| ||  | || || |||||||| ||||| 
Sbjct: 2262 gcatacagtgcttccttttatccctgcatggaaattttgtatgagtgctatgaggatgta 2321

                                                     
Query: 394  gcctctggaagtgaaatcccgagtgttgtgttggctggtcg 434
            |||  ||| ||||| || |  |||||||| |||||||||||
Sbjct: 2322 gccagtggtagtgagattcgcagtgttgttttggctggtcg 2362



to top

>gb|AC135231.23| Medicago truncatula clone mth2-28m10, complete sequence
          Length = 106771

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 101/121 (83%)
 Strand = Plus / Minus

                                                                         
Query: 17    aggatgttgatggaagggcaactgatgttgctcttggatggtcggttgcactaggatccc 76
             ||||||| ||||| ||||| |||||||||||| | |||||||| ||||| || || || |
Sbjct: 74959 aggatgtggatggcagggctactgatgttgctttgggatggtctgttgcccttggttctc 74900

                                                                         
Query: 77    cgttcacctttgctactactctagaacaggagtacaagagtgatatctttggggagcgag 136
             | ||||| ||||| |||||  |||| ||||| ||||| ||||| |||||||||||| |||
Sbjct: 74899 ctttcacatttgccactacattagagcaggaatacaaaagtgacatctttggggagagag 74840

              
Query: 137   g 137
             |
Sbjct: 74839 g 74839



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                         
Query: 334   gcatacagtgcatcattttacccttgcatggacatcctctacgaatgctatgaagatgtt 393
             ||||||||||| || ||||| || |||||||||||  | || || |||||||||||||| 
Sbjct: 74437 gcatacagtgcttccttttatccctgcatggacattttgtatgagtgctatgaagatgta 74378

                                                      
Query: 394   gcctctggaagtgaaatcccgagtgttgtgttggctggtcg 434
             |||  ||| ||||| || |  |||||||| |||||||||||
Sbjct: 74377 gccagtggtagtgagattcgtagtgttgttttggctggtcg 74337



to top

>emb|X69880.1|ATAAI A.thaliana gene for acetohydroxy acid isomeroreductase
          Length = 4395

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 94/113 (83%)
 Strand = Plus / Plus

                                                                        
Query: 16   caggatgttgatggaagggcaactgatgttgctcttggatggtcggttgcactaggatcc 75
            ||||||||||| || || ||  | ||||||||  | |||||||| || ||||| || || 
Sbjct: 2601 caggatgttgacggtagagccgccgatgttgcattgggatggtcagtagcacttggttct 2660

                                                                 
Query: 76   ccgttcacctttgctactactctagaacaggagtacaagagtgatatctttgg 128
            ||||| || |||||||||||||| ||||||||||||| |||||| ||||||||
Sbjct: 2661 ccgtttacttttgctactactcttgaacaggagtacaggagtgacatctttgg 2713



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                     
Query: 135  aggaattttgctgggtgctgtccatggcatcgtggaggctctgtttaggagatacac 191
            |||||||||||| |||||||| || || ||||||||| |||||||||| ||||||||
Sbjct: 2799 aggaattttgcttggtgctgttcacggaatcgtggagtctctgtttagaagatacac 2855



to top

>emb|AL137082.1|ATF14P22 Arabidopsis thaliana DNA chromosome 3, BAC clone F14P22
          Length = 94239

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 94/113 (83%)
 Strand = Plus / Plus

                                                                         
Query: 16    caggatgttgatggaagggcaactgatgttgctcttggatggtcggttgcactaggatcc 75
             ||||||||||| || || ||  | ||||||||  | |||||||| || ||||| || || 
Sbjct: 66580 caggatgttgacggtagagccgccgatgttgcattgggatggtcagtagcacttggttct 66639

                                                                  
Query: 76    ccgttcacctttgctactactctagaacaggagtacaagagtgatatctttgg 128
             ||||| || |||||||||||||| ||||||||||||| |||||| ||||||||
Sbjct: 66640 ccgtttacttttgctactactcttgaacaggagtacaggagtgacatctttgg 66692



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                      
Query: 135   aggaattttgctgggtgctgtccatggcatcgtggaggctctgtttaggagatacac 191
             |||||||||||| |||||||| || || ||||||||| |||||||||| ||||||||
Sbjct: 66778 aggaattttgcttggtgctgttcacggaatcgtggagtctctgtttagaagatacac 66834



to top

>gb|DQ163261.1| Candidatus Hamiltonella defensa clone P040089 genomic sequence
          Length = 1818

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 259  aagaccatctcaaagaagggga 280
            ||||||||||||||||||||||
Sbjct: 1714 aagaccatctcaaagaagggga 1693



to top

>gb|DQ163792.1| Candidatus Hamiltonella defensa clone P180035 genomic sequence
          Length = 1661

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 259  aagaccatctcaaagaagggga 280
            ||||||||||||||||||||||
Sbjct: 1550 aagaccatctcaaagaagggga 1529



to top

>gb|AC163998.2| Mus musculus chromosome 15, clone RP24-326H11, complete sequence
          Length = 153996

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 254    tctcaaagaccatctcaaaga 274
              |||||||||||||||||||||
Sbjct: 113517 tctcaaagaccatctcaaaga 113497



to top

>emb|BX936312.12| Zebrafish DNA sequence from clone DKEY-204O5 in linkage group 7,
            complete sequence
          Length = 158510

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 310  gaaggcaaaaaggagttcaac 330
            |||||||||||||||||||||
Sbjct: 4979 gaaggcaaaaaggagttcaac 4959



to top

>emb|AL356295.9| Human DNA sequence from clone RP11-768P11 on chromosome 13, complete
              sequence
          Length = 134347

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 271    aagaaggggatgcttgaggta 291
              |||||||||||||||||||||
Sbjct: 101929 aagaaggggatgcttgaggta 101909



to top

>gb|AC087113.11| Mus Musculus Strain C57BL6/J Chromosome 15 BAC, RP23-99A15, Complete
              Sequence, complete sequence
          Length = 223882

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 254    tctcaaagaccatctcaaaga 274
              |||||||||||||||||||||
Sbjct: 174216 tctcaaagaccatctcaaaga 174236



to top

>emb|AL845434.11| Mouse DNA sequence from clone RP23-211O3 on chromosome 2, complete
             sequence
          Length = 131971

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 443   tgacaggaaggccttctgctt 463
             |||||||||||||||||||||
Sbjct: 31001 tgacaggaaggccttctgctt 30981



to top

>gb|AC007208.13| Drosophila melanogaster clone BACR05D08, complete sequence
          Length = 172190

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 316   aaaaaggagttcaacaaggc 335
             ||||||||||||||||||||
Sbjct: 16801 aaaaaggagttcaacaaggc 16820



to top

>ref|XM_526042.1| PREDICTED: Pan troglodytes ephrin receptor EphA4 (LOC470660), mRNA
          Length = 2280

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    ttgctgttcaccaggatgtt 24
            ||||||||||||||||||||
Sbjct: 1559 ttgctgttcaccaggatgtt 1540



to top

>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 305     gcgcggaaggcaaaaaggagttca 328
               ||||||||||||||||| ||||||
Sbjct: 1771449 gcgcggaaggcaaaaagaagttca 1771472



to top

>gb|AC164536.5| Mus musculus chromosome 18, clone RP23-425H1, complete sequence
          Length = 188835

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   agtacaagagtgatatcttt 126
             ||||||||||||||||||||
Sbjct: 91855 agtacaagagtgatatcttt 91874



to top

>gb|AY232099.1| Drosophila yakuba clone yak-ad_CG11876 mRNA sequence
          Length = 597

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaagcactgttgagggcatc 243
           ||||||||||||||||||||
Sbjct: 116 aaagcactgttgagggcatc 97



to top

>emb|AL513165.12| Human DNA sequence from clone RP11-613M10 on chromosome 9 Contains part
             of a novel gene, the FBXO10 gene (FBX10) for F-box only
             protein 10, two novel genes, a RAB1B (member RAS oncogene
             family) pseudogene the 5' end of a novel gene (KIAA0967)
             and three CpG islands, complete sequence
          Length = 194976

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 437   ggtttatgacaggaaggccttctg 460
             |||| |||||||||||||||||||
Sbjct: 32063 ggttgatgacaggaaggccttctg 32040



to top

>emb|AL391374.9| Human DNA sequence from clone RP11-631G24 on chromosome 13 Contains a
              novel gene, complete sequence
          Length = 172883

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 269    caaagaaggggatgcttgaggtat 292
              ||||||||||| ||||||||||||
Sbjct: 103159 caaagaaggggctgcttgaggtat 103182



to top

>gb|BC026327.1| Homo sapiens EPH receptor A4, mRNA (cDNA clone MGC:26318
            IMAGE:4814429), complete cds
          Length = 3149

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    ttgctgttcaccaggatgtt 24
            ||||||||||||||||||||
Sbjct: 2305 ttgctgttcaccaggatgtt 2286



to top

>gb|AC090858.6| Homo sapiens chromosome 11, clone RP11-676E14, complete sequence
          Length = 168906

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 391   gttgcctctggaagtgaaat 410
             ||||||||||||||||||||
Sbjct: 87312 gttgcctctggaagtgaaat 87331



to top

>gb|AC090868.4| Homo sapiens chromosome 15, clone RP11-795G3, complete sequence
          Length = 183890

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 385    gaagatgttgcctctggaag 404
              ||||||||||||||||||||
Sbjct: 125449 gaagatgttgcctctggaag 125468



to top

>emb|BX248329.10| Zebrafish DNA sequence from clone CH211-206P14, complete sequence
          Length = 151789

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 389    atgttgcctctggaagtgaa 408
              ||||||||||||||||||||
Sbjct: 122429 atgttgcctctggaagtgaa 122448



to top

>ref|NM_004438.3| Homo sapiens EPH receptor A4 (EPHA4), mRNA
          Length = 6364

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    ttgctgttcaccaggatgtt 24
            ||||||||||||||||||||
Sbjct: 2312 ttgctgttcaccaggatgtt 2293



to top

>gb|AY335759.1| Synthetic construct Homo sapiens EphA4 (EPHA4) mRNA, partial cds
          Length = 2961

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    ttgctgttcaccaggatgtt 24
            ||||||||||||||||||||
Sbjct: 2270 ttgctgttcaccaggatgtt 2251



to top

>gb|AC009269.6|AC009269 Homo sapiens chromosome 15, clone RP11-138H8, complete sequence
          Length = 172850

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 385   gaagatgttgcctctggaag 404
             ||||||||||||||||||||
Sbjct: 69063 gaagatgttgcctctggaag 69082



to top

>gb|AC010899.8| Homo sapiens BAC clone RP11-543K1 from 2, complete sequence
          Length = 210232

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      ttgctgttcaccaggatgtt 24
              ||||||||||||||||||||
Sbjct: 125573 ttgctgttcaccaggatgtt 125592



to top

>gb|AC007343.7| Homo sapiens chromosome 16 clone RP11-463J22, complete sequence
          Length = 186732

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 194    agcaaggaatggatgaggag 213
              ||||||||||||||||||||
Sbjct: 144165 agcaaggaatggatgaggag 144184



to top

>gb|BC105002.1| Homo sapiens EPH receptor A4, mRNA (cDNA clone MGC:132662
            IMAGE:8144005), complete cds
          Length = 3097

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    ttgctgttcaccaggatgtt 24
            ||||||||||||||||||||
Sbjct: 2306 ttgctgttcaccaggatgtt 2287



to top

>gb|BC105000.1| Homo sapiens EPH receptor A4, mRNA (cDNA clone MGC:132660
            IMAGE:8144003), complete cds
          Length = 3097

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    ttgctgttcaccaggatgtt 24
            ||||||||||||||||||||
Sbjct: 2306 ttgctgttcaccaggatgtt 2287



to top

>gb|AC007544.4| Homo sapiens 12 BAC RP11-12D15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 119034

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 337   tacagtgcatcattttacccttgc 360
             |||||||||| |||||||||||||
Sbjct: 46852 tacagtgcattattttacccttgc 46829



to top

>gb|AE003670.5| Drosophila melanogaster chromosome 2L, section 79 of 83 of the complete
             sequence
          Length = 258711

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 316   aaaaaggagttcaacaaggc 335
             ||||||||||||||||||||
Sbjct: 45876 aaaaaggagttcaacaaggc 45895



to top

>gb|AC005130.1|AC005130 Drosophila melanogaster, chromosome 2L, region 39C1-39D1, P1 clone
             DS01560, complete sequence
          Length = 84395

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 316   aaaaaggagttcaacaaggc 335
             ||||||||||||||||||||
Sbjct: 48585 aaaaaggagttcaacaaggc 48604



to top

>gb|L36645.1|HUMRPTKC Homo sapiens receptor protein-tyrosine kinase (HEK8) mRNA, complete
            cds
          Length = 3107

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    ttgctgttcaccaggatgtt 24
            ||||||||||||||||||||
Sbjct: 2303 ttgctgttcaccaggatgtt 2284


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,842,166
Number of Sequences: 3902068
Number of extensions: 3842166
Number of successful extensions: 71010
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70855
Number of HSP's gapped (non-prelim): 154
length of query: 463
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 441
effective length of database: 17,147,199,772
effective search space: 7561915099452
effective search space used: 7561915099452
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top