ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast47e06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor (Po... 145 4e-35
2PGIP2_PHAVU (P58822) Polygalacturonase inhibitor 2 precursor (Po... 53 4e-07
3PGIP3_PHAVU (P58823) Polygalacturonase inhibitor 3 precursor (Po... 52 5e-07
4PGIP1_PHAVU (P35334) Polygalacturonase inhibitor 1 precursor (Po... 52 5e-07
5PGIP2_ARATH (Q9M5J8) Polygalacturonase inhibitor 2 precursor (Po... 52 5e-07
6PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor (Polyg... 50 2e-06
7PGIP1_ARATH (Q9M5J9) Polygalacturonase inhibitor 1 precursor (Po... 50 2e-06
8EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase E... 38 0.012
9DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100... 37 0.016
10BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated rec... 36 0.035
11TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precur... 32 0.87
12PCX1_HUMAN (Q96RV3) Pecanex-like protein 1 (Pecanex homolog) 28 7.4
13YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in... 28 7.4
14RMT2_EMENI (Q5B058) Arginine N-methyltransferase 2 (EC 2.1.1.-) 28 9.7
15GP46_LEIAM (P21978) Surface membrane glycoprotein GP46/M-2 precu... 28 9.7

>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor|
           (Polygalacturonase-inhibiting protein) (Floral organ
           regulator 1)
          Length = 332

 Score =  145 bits (366), Expect = 4e-35
 Identities = 68/80 (85%), Positives = 74/80 (92%)
 Frame = +3

Query: 195 RCPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEAGRVNNVFIDGADDVHG 374
           RCP +D+QAL+RVKQ+LGNPATL TWS ASADCC WDH+RCDEAGRVNNVFIDGA+DV G
Sbjct: 26  RCPPSDKQALMRVKQSLGNPATLSTWSLASADCCEWDHVRCDEAGRVNNVFIDGANDVRG 85

Query: 375 QIPSASAGLTALMSLSLFRL 434
           QIPSA AGLTALMSLSLFRL
Sbjct: 86  QIPSAVAGLTALMSLSLFRL 105



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>PGIP2_PHAVU (P58822) Polygalacturonase inhibitor 2 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-2)
          Length = 342

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
 Frame = +3

Query: 198 CPQADRQALLRVKQALGNPATLKTWSPASADCC--TWDHLRCD---EAGRVNNVFIDGAD 362
           C   D+QALL++K+ LGNP TL +W P + DCC  TW  + CD   +  RVNN+ + G +
Sbjct: 32  CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLN 90

Query: 363 -DVHGQIPSASAGLTAL 410
                 IPS+ A L  L
Sbjct: 91  LPKPYPIPSSLANLPYL 107



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>PGIP3_PHAVU (P58823) Polygalacturonase inhibitor 3 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-2) (PGIP-3)
          Length = 342

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
 Frame = +3

Query: 198 CPQADRQALLRVKQALGNPATLKTWSPASADCC--TWDHLRCD---EAGRVNNVFIDGAD 362
           C   D+QALL++K+ LGNP TL +W P + DCC  TW  + CD   +  RVNN+ + G +
Sbjct: 32  CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGHN 90

Query: 363 -DVHGQIPSASAGLTAL 410
                 IPS+ A L  L
Sbjct: 91  LPKPYPIPSSLANLPYL 107



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>PGIP1_PHAVU (P35334) Polygalacturonase inhibitor 1 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-1)
          Length = 342

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
 Frame = +3

Query: 198 CPQADRQALLRVKQALGNPATLKTWSPASADCC--TWDHLRCD---EAGRVNNVFIDGAD 362
           C   D+QALL++K+ LGNP TL +W P + DCC  TW  + CD   +  RVNN+ + G +
Sbjct: 32  CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGHN 90

Query: 363 -DVHGQIPSASAGLTAL 410
                 IPS+ A L  L
Sbjct: 91  LPKPYPIPSSLANLPYL 107



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>PGIP2_ARATH (Q9M5J8) Polygalacturonase inhibitor 2 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-2)
          Length = 330

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
 Frame = +3

Query: 198 CPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEA---GRVNNVFI-DGADD 365
           C + D+  LL++K++L NP  L +W P   DCC+W  L C +A    RV ++ I DG  +
Sbjct: 25  CHKDDKTTLLKIKKSLNNPYHLASWDP-KTDCCSWYCLECGDATVNHRVTSLIIQDG--E 81

Query: 366 VHGQIPSASAGLTALMSLSLFR 431
           + GQIP     L  L SL +FR
Sbjct: 82  ISGQIPPEVGDLPYLTSL-IFR 102



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>PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor|
           (Polygalacturonase-inhibiting protein)
          Length = 330

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
 Frame = +3

Query: 198 CPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDE-AGRVNNVFIDGADDVHG 374
           C   D++ LL++K+A G+P  L +W  +  DCC W  + CD    R+N++ I  A  V G
Sbjct: 27  CNPDDKKVLLQIKKAFGDPYVLASWK-SDTDCCDWYCVTCDSTTNRINSLTI-FAGQVSG 84

Query: 375 QIPSASAGLTALMSLSLFR 431
           QIP+    L  L +L   +
Sbjct: 85  QIPALVGDLPYLETLEFHK 103



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>PGIP1_ARATH (Q9M5J9) Polygalacturonase inhibitor 1 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-1)
          Length = 330

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
 Frame = +3

Query: 198 CPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEA---GRVNNVFIDGADDV 368
           C Q D+  LL++K++L NP  L +W P   DCC+W  L C +A    RV  + I  +  +
Sbjct: 25  CNQNDKNTLLKIKKSLNNPYHLASWDP-QTDCCSWYCLECGDATVNHRVTALTI-FSGQI 82

Query: 369 HGQIPSASAGLTALMSLSLFRL 434
            GQIP+    L  L +L   +L
Sbjct: 83  SGQIPAEVGDLPYLETLVFRKL 104



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>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor|
           (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS
           MICROSPOROCYTES1 protein)
          Length = 1192

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
 Frame = +3

Query: 207 ADRQALLRVKQALGNPATLKTWS-PASADCCTWDHLRCDEAGRVNNVFIDGADDVHGQIP 383
           ++  +L+  K++L NP+ L +W+  +SA  C W  + C   GRVN++ +     + GQIP
Sbjct: 25  SETTSLISFKRSLENPSLLSSWNVSSSASHCDWVGVTC-LLGRVNSLSLPSL-SLRGQIP 82

Query: 384 SASAGLTALMSLSL 425
              + L  L  L L
Sbjct: 83  KEISSLKNLRELCL 96



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>DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100 precursor|
          Length = 372

 Score = 37.4 bits (85), Expect = 0.016
 Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 15/91 (16%)
 Frame = +3

Query: 198 CPQADRQALLRVKQALGNP--ATLKTWSPASADCCTWDHLRCD-EAGRVNNVFIDGADD- 365
           C   D+ AL   K +L  P      TWS  +  C  W  + CD ++GRV ++ + G  + 
Sbjct: 27  CSPKDQTALNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPDSGRVTDISLRGESED 86

Query: 366 -----------VHGQIPSASAGLTALMSLSL 425
                      + G I  A   LTAL SL L
Sbjct: 87  AIFQKAGRSGYMSGSIDPAVCDLTALTSLVL 117



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>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1|
           precursor (EC 2.7.11.1) (BRI1-associated receptor kinase
           1) (Somatic embryogenesis receptor-like kinase 3)
          Length = 615

 Score = 36.2 bits (82), Expect = 0.035
 Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 24/98 (24%)
 Frame = +3

Query: 207 ADRQALLRVKQALGNP-ATLKTWSPASADCCTWDHLRCDEAGRVNNVFIDGA-------- 359
           A+  AL  +K +L +P   L++W       CTW H+ C+    V  V +  A        
Sbjct: 27  AEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNANLSGQLVM 86

Query: 360 ---------------DDVHGQIPSASAGLTALMSLSLF 428
                          +++ G IP     LT L+SL L+
Sbjct: 87  QLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLY 124



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>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC|
           2.7.11.1)
          Length = 942

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 23/72 (31%), Positives = 33/72 (45%)
 Frame = +3

Query: 210 DRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEAGRVNNVFIDGADDVHGQIPSA 389
           D  A+L +K++L NP +   WS    D C W H+ C    RV  + I G   + G +   
Sbjct: 28  DLSAMLSLKKSL-NPPSSFGWS--DPDPCKWTHIVCTGTKRVTRIQI-GHSGLQGTLSPD 83

Query: 390 SAGLTALMSLSL 425
              L+ L  L L
Sbjct: 84  LRNLSELERLEL 95



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>PCX1_HUMAN (Q96RV3) Pecanex-like protein 1 (Pecanex homolog)|
          Length = 2341

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = -1

Query: 382  GIWPCTSSAPSMKTLFTRPASSHRRWSHVQQSADAGDHVFSVA--GLPSACFTRSSACRS 209
            G  PC  S+ S  +L   P+S   R S V Q   +G    +    GLPS+  + SS    
Sbjct: 2144 GFVPCRRSSTSQISLRNLPSSIQSRLSMVNQMEPSGQSGLACVQHGLPSS--SSSSQSIP 2201

Query: 208  ACGH 197
            AC H
Sbjct: 2202 ACKH 2205



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>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I|
          Length = 536

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = -1

Query: 418 SDMSAVSPAEADGIWPCTSSAPSMKTLFTRPASSHRRWSHVQQSA-DAGDHVFSVAGLPS 242
           S  S +S + A  I   +SS+P   + FT PASS    S V  S+  +     S+    S
Sbjct: 44  SSSSMLSSSSATAISSSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSSSASLTSSSS 103

Query: 241 ACFTRSSA 218
           A  T SS+
Sbjct: 104 ATLTSSSS 111



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>RMT2_EMENI (Q5B058) Arginine N-methyltransferase 2 (EC 2.1.1.-)|
          Length = 426

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
 Frame = +3

Query: 207 ADRQALLRVKQALGNPATLKT----WSP--ASADCCTWDHLRCDEAGRVNNVFIDGADDV 368
           A  + LLR   A GNPA +K     +SP  A+   C  D    +E  + N V  +G    
Sbjct: 27  AKLRRLLRANDAAGNPANVKDPETGYSPLHAAIAACEPDE---EEDVKSNGVQTNGDRQT 83

Query: 369 HGQIPSASAGLTALMSL 419
           HGQ  +  A +  +  L
Sbjct: 84  HGQESTVEAAVQTVKLL 100



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>GP46_LEIAM (P21978) Surface membrane glycoprotein GP46/M-2 precursor|
          Length = 476

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 207 ADRQALLRVKQALGN--PATLKTWSPASADCCTWDHLRCDEAG 329
           A ++  L V QA     PA   TW+   +D C+W+H+ C  +G
Sbjct: 41  AQQKNTLTVLQAFARAIPALGDTWT--GSDFCSWEHIICYSSG 81


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,363,228
Number of Sequences: 219361
Number of extensions: 373719
Number of successful extensions: 1477
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1474
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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