| Clone Name | bast47e06 |
|---|---|
| Clone Library Name | barley_pub |
>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) Length = 332 Score = 145 bits (366), Expect = 4e-35 Identities = 68/80 (85%), Positives = 74/80 (92%) Frame = +3 Query: 195 RCPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEAGRVNNVFIDGADDVHG 374 RCP +D+QAL+RVKQ+LGNPATL TWS ASADCC WDH+RCDEAGRVNNVFIDGA+DV G Sbjct: 26 RCPPSDKQALMRVKQSLGNPATLSTWSLASADCCEWDHVRCDEAGRVNNVFIDGANDVRG 85 Query: 375 QIPSASAGLTALMSLSLFRL 434 QIPSA AGLTALMSLSLFRL Sbjct: 86 QIPSAVAGLTALMSLSLFRL 105
>PGIP2_PHAVU (P58822) Polygalacturonase inhibitor 2 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) Length = 342 Score = 52.8 bits (125), Expect = 4e-07 Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 6/77 (7%) Frame = +3 Query: 198 CPQADRQALLRVKQALGNPATLKTWSPASADCC--TWDHLRCD---EAGRVNNVFIDGAD 362 C D+QALL++K+ LGNP TL +W P + DCC TW + CD + RVNN+ + G + Sbjct: 32 CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLN 90 Query: 363 -DVHGQIPSASAGLTAL 410 IPS+ A L L Sbjct: 91 LPKPYPIPSSLANLPYL 107
>PGIP3_PHAVU (P58823) Polygalacturonase inhibitor 3 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) (PGIP-3) Length = 342 Score = 52.4 bits (124), Expect = 5e-07 Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 6/77 (7%) Frame = +3 Query: 198 CPQADRQALLRVKQALGNPATLKTWSPASADCC--TWDHLRCD---EAGRVNNVFIDGAD 362 C D+QALL++K+ LGNP TL +W P + DCC TW + CD + RVNN+ + G + Sbjct: 32 CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGHN 90 Query: 363 -DVHGQIPSASAGLTAL 410 IPS+ A L L Sbjct: 91 LPKPYPIPSSLANLPYL 107
>PGIP1_PHAVU (P35334) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (PGIP-1) Length = 342 Score = 52.4 bits (124), Expect = 5e-07 Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 6/77 (7%) Frame = +3 Query: 198 CPQADRQALLRVKQALGNPATLKTWSPASADCC--TWDHLRCD---EAGRVNNVFIDGAD 362 C D+QALL++K+ LGNP TL +W P + DCC TW + CD + RVNN+ + G + Sbjct: 32 CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGHN 90 Query: 363 -DVHGQIPSASAGLTAL 410 IPS+ A L L Sbjct: 91 LPKPYPIPSSLANLPYL 107
>PGIP2_ARATH (Q9M5J8) Polygalacturonase inhibitor 2 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) Length = 330 Score = 52.4 bits (124), Expect = 5e-07 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%) Frame = +3 Query: 198 CPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEA---GRVNNVFI-DGADD 365 C + D+ LL++K++L NP L +W P DCC+W L C +A RV ++ I DG + Sbjct: 25 CHKDDKTTLLKIKKSLNNPYHLASWDP-KTDCCSWYCLECGDATVNHRVTSLIIQDG--E 81 Query: 366 VHGQIPSASAGLTALMSLSLFR 431 + GQIP L L SL +FR Sbjct: 82 ISGQIPPEVGDLPYLTSL-IFR 102
>PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor| (Polygalacturonase-inhibiting protein) Length = 330 Score = 50.4 bits (119), Expect = 2e-06 Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 1/79 (1%) Frame = +3 Query: 198 CPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDE-AGRVNNVFIDGADDVHG 374 C D++ LL++K+A G+P L +W + DCC W + CD R+N++ I A V G Sbjct: 27 CNPDDKKVLLQIKKAFGDPYVLASWK-SDTDCCDWYCVTCDSTTNRINSLTI-FAGQVSG 84 Query: 375 QIPSASAGLTALMSLSLFR 431 QIP+ L L +L + Sbjct: 85 QIPALVGDLPYLETLEFHK 103
>PGIP1_ARATH (Q9M5J9) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (PGIP-1) Length = 330 Score = 50.1 bits (118), Expect = 2e-06 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 3/82 (3%) Frame = +3 Query: 198 CPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEA---GRVNNVFIDGADDV 368 C Q D+ LL++K++L NP L +W P DCC+W L C +A RV + I + + Sbjct: 25 CNQNDKNTLLKIKKSLNNPYHLASWDP-QTDCCSWYCLECGDATVNHRVTALTI-FSGQI 82 Query: 369 HGQIPSASAGLTALMSLSLFRL 434 GQIP+ L L +L +L Sbjct: 83 SGQIPAEVGDLPYLETLVFRKL 104
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 37.7 bits (86), Expect = 0.012 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Frame = +3 Query: 207 ADRQALLRVKQALGNPATLKTWS-PASADCCTWDHLRCDEAGRVNNVFIDGADDVHGQIP 383 ++ +L+ K++L NP+ L +W+ +SA C W + C GRVN++ + + GQIP Sbjct: 25 SETTSLISFKRSLENPSLLSSWNVSSSASHCDWVGVTC-LLGRVNSLSLPSL-SLRGQIP 82 Query: 384 SASAGLTALMSLSL 425 + L L L L Sbjct: 83 KEISSLKNLRELCL 96
>DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100 precursor| Length = 372 Score = 37.4 bits (85), Expect = 0.016 Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 15/91 (16%) Frame = +3 Query: 198 CPQADRQALLRVKQALGNP--ATLKTWSPASADCCTWDHLRCD-EAGRVNNVFIDGADD- 365 C D+ AL K +L P TWS + C W + CD ++GRV ++ + G + Sbjct: 27 CSPKDQTALNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPDSGRVTDISLRGESED 86 Query: 366 -----------VHGQIPSASAGLTALMSLSL 425 + G I A LTAL SL L Sbjct: 87 AIFQKAGRSGYMSGSIDPAVCDLTALTSLVL 117
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 36.2 bits (82), Expect = 0.035 Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 24/98 (24%) Frame = +3 Query: 207 ADRQALLRVKQALGNP-ATLKTWSPASADCCTWDHLRCDEAGRVNNVFIDGA-------- 359 A+ AL +K +L +P L++W CTW H+ C+ V V + A Sbjct: 27 AEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNANLSGQLVM 86 Query: 360 ---------------DDVHGQIPSASAGLTALMSLSLF 428 +++ G IP LT L+SL L+ Sbjct: 87 QLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLY 124
>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC| 2.7.11.1) Length = 942 Score = 31.6 bits (70), Expect = 0.87 Identities = 23/72 (31%), Positives = 33/72 (45%) Frame = +3 Query: 210 DRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEAGRVNNVFIDGADDVHGQIPSA 389 D A+L +K++L NP + WS D C W H+ C RV + I G + G + Sbjct: 28 DLSAMLSLKKSL-NPPSSFGWS--DPDPCKWTHIVCTGTKRVTRIQI-GHSGLQGTLSPD 83 Query: 390 SAGLTALMSLSL 425 L+ L L L Sbjct: 84 LRNLSELERLEL 95
>PCX1_HUMAN (Q96RV3) Pecanex-like protein 1 (Pecanex homolog)| Length = 2341 Score = 28.5 bits (62), Expect = 7.4 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Frame = -1 Query: 382 GIWPCTSSAPSMKTLFTRPASSHRRWSHVQQSADAGDHVFSVA--GLPSACFTRSSACRS 209 G PC S+ S +L P+S R S V Q +G + GLPS+ + SS Sbjct: 2144 GFVPCRRSSTSQISLRNLPSSIQSRLSMVNQMEPSGQSGLACVQHGLPSS--SSSSQSIP 2201 Query: 208 ACGH 197 AC H Sbjct: 2202 ACKH 2205
>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I| Length = 536 Score = 28.5 bits (62), Expect = 7.4 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = -1 Query: 418 SDMSAVSPAEADGIWPCTSSAPSMKTLFTRPASSHRRWSHVQQSA-DAGDHVFSVAGLPS 242 S S +S + A I +SS+P + FT PASS S V S+ + S+ S Sbjct: 44 SSSSMLSSSSATAISSSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSSSASLTSSSS 103 Query: 241 ACFTRSSA 218 A T SS+ Sbjct: 104 ATLTSSSS 111
>RMT2_EMENI (Q5B058) Arginine N-methyltransferase 2 (EC 2.1.1.-)| Length = 426 Score = 28.1 bits (61), Expect = 9.7 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 6/77 (7%) Frame = +3 Query: 207 ADRQALLRVKQALGNPATLKT----WSP--ASADCCTWDHLRCDEAGRVNNVFIDGADDV 368 A + LLR A GNPA +K +SP A+ C D +E + N V +G Sbjct: 27 AKLRRLLRANDAAGNPANVKDPETGYSPLHAAIAACEPDE---EEDVKSNGVQTNGDRQT 83 Query: 369 HGQIPSASAGLTALMSL 419 HGQ + A + + L Sbjct: 84 HGQESTVEAAVQTVKLL 100
>GP46_LEIAM (P21978) Surface membrane glycoprotein GP46/M-2 precursor| Length = 476 Score = 28.1 bits (61), Expect = 9.7 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = +3 Query: 207 ADRQALLRVKQALGN--PATLKTWSPASADCCTWDHLRCDEAG 329 A ++ L V QA PA TW+ +D C+W+H+ C +G Sbjct: 41 AQQKNTLTVLQAFARAIPALGDTWT--GSDFCSWEHIICYSSG 81 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,363,228 Number of Sequences: 219361 Number of extensions: 373719 Number of successful extensions: 1477 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1443 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1474 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)