ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast47e04 |
|---|---|
| Clone Library Name | barley_pub |
>CFI_MAIZE (Q08704) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 231 Score = 113 bits (283), Expect = 1e-25 Identities = 59/88 (67%), Positives = 65/88 (73%) Frame = +3 Query: 129 VVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXXXXXXXXXXXX 308 VVFPP+ARPPGSA +HFL GAGVRG+EIGG+FIKFTAIGVYL+ Sbjct: 11 VVFPPVARPPGSAGSHFLGGAGVRGVEIGGNFIKFTAIGVYLE-DAAVPALAKKWGGKTA 69 Query: 309 XXXXSDAAFFRDVVTGEFEKFTRVTMIL 392 SDAAFFRDVVTG+FEKFTRVTMIL Sbjct: 70 DELASDAAFFRDVVTGDFEKFTRVTMIL 97
>CFI_ELAUM (O65333) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 256 Score = 96.3 bits (238), Expect = 2e-20 Identities = 51/99 (51%), Positives = 62/99 (62%) Frame = +3 Query: 96 TMAVSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXX 275 T +V+E++V+ V+FPP +PPGS+ FL GAGVRG+EI G FIKFTAIGVYL+ Sbjct: 5 TKSVTEVQVESVIFPPEVKPPGSSKTLFLGGAGVRGIEIQGKFIKFTAIGVYLEDNAVPS 64 Query: 276 XXXXXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMIL 392 S FFRD+VTG EKFTRVT IL Sbjct: 65 LAVKWKGKSAQELTES-VEFFRDIVTGPMEKFTRVTTIL 102
>CFI_CALCH (Q42663) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) (Fragment) Length = 237 Score = 93.6 bits (231), Expect = 1e-19 Identities = 49/99 (49%), Positives = 61/99 (61%) Frame = +3 Query: 96 TMAVSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXX 275 T + L+V+ +VFP +PPGS ++ FL GAGVRGMEI G+F+KFT IGVYL+ Sbjct: 4 TPLTTGLQVESIVFPSSVKPPGSTNSLFLGGAGVRGMEIQGNFVKFTGIGVYLEDKAIPL 63 Query: 276 XXXXXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMIL 392 S FFRD+VTG FEKFT+VTMIL Sbjct: 64 LAAKRKGKTVAELLDS-VEFFRDIVTGPFEKFTQVTMIL 101
>CFI_VITVI (P51117) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 234 Score = 92.8 bits (229), Expect = 2e-19 Identities = 49/97 (50%), Positives = 61/97 (62%) Frame = +3 Query: 102 AVSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXXX 281 +V+ ++V+ V+FPP +PPGS + FL GAGVRG+EI G F+KFTAIGVYL+ Sbjct: 6 SVTAVQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLENSAVPTLA 65 Query: 282 XXXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMIL 392 S FFRDVVTG FEKFT+VT IL Sbjct: 66 VKWKGKTVEELADS-VDFFRDVVTGPFEKFTKVTTIL 101
>CFI_DIACA (Q43754) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 221 Score = 90.1 bits (222), Expect = 1e-18 Identities = 46/96 (47%), Positives = 59/96 (61%) Frame = +3 Query: 105 VSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXXXX 284 +++++V+ VFPP +PPGS FL GAGVRG+EI G FIKFTAI VY++ Sbjct: 4 ITQIQVESHVFPPEVKPPGSDKTFFLGGAGVRGLEIQGKFIKFTAIAVYIEDDAVSSLAV 63 Query: 285 XXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMIL 392 S FF+D+VTG FEKFT+VTMIL Sbjct: 64 KWKGKTADELTDS-VDFFKDIVTGPFEKFTQVTMIL 98
>CFIA_PETHY (P11650) Chalcone--flavonone isomerase A (EC 5.5.1.6) (Chalcone| isomerase A) Length = 241 Score = 88.2 bits (217), Expect = 4e-18 Identities = 48/98 (48%), Positives = 59/98 (60%) Frame = +3 Query: 99 MAVSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXX 278 ++V++++V+ F P P GS + FLAGAG RG+EI G F+KFTAIGVYL+ Sbjct: 5 VSVTKMQVENYAFAPTVNPAGSTNTLFLAGAGHRGLEIEGKFVKFTAIGVYLEESAIPFL 64 Query: 279 XXXXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMIL 392 S FFRDVVTG FEKFTRVTMIL Sbjct: 65 AEKWKGKTPQELTDS-VEFFRDVVTGPFEKFTRVTMIL 101
>CFI_IPOPU (O22604) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 241 Score = 86.7 bits (213), Expect = 1e-17 Identities = 45/96 (46%), Positives = 56/96 (58%) Frame = +3 Query: 105 VSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXXXX 284 V+E++V+ VFP +PPG+A L GAG RG+ I G F+KFTAIGVYL+ Sbjct: 7 VAEVKVESYVFPATVKPPGTAKTLILGGAGARGLNIDGKFVKFTAIGVYLEADAVPSLAV 66 Query: 285 XXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMIL 392 S FFRD+VTG FEK TR+TMIL Sbjct: 67 KWNGKSVEELTDS-VQFFRDIVTGPFEKLTRITMIL 101
>CFIB_PETHY (P11651) Chalcone--flavonone isomerase B (EC 5.5.1.6) (Chalcone| isomerase B) Length = 220 Score = 84.3 bits (207), Expect = 6e-17 Identities = 43/99 (43%), Positives = 58/99 (58%) Frame = +3 Query: 96 TMAVSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXX 275 +++V++++V+ VFPP +PP S FL GAG RG+++ G F+KFT IGVYL+ Sbjct: 4 SVSVTKVQVENYVFPPTVKPPASTKTLFLGGAGHRGLDVEGKFVKFTVIGVYLEESAVQF 63 Query: 276 XXXXXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMIL 392 S FFRD+VTG FEKFTRV IL Sbjct: 64 LAPKWKGKSAEELIHS-VDFFRDIVTGPFEKFTRVRFIL 101
>CHI_ARALP (Q9LKC3) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 244 Score = 78.6 bits (192), Expect = 3e-15 Identities = 42/97 (43%), Positives = 56/97 (57%) Frame = +3 Query: 102 AVSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXXX 281 +V++L+VD V F P + P S++ FL GAGVRG++I G F+ FT IGVYL+ Sbjct: 13 SVTKLQVDSVTFDPSVKSPASSNPLFLGGAGVRGLDIQGKFVIFTVIGVYLESNAVPSLS 72 Query: 282 XXXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMIL 392 S FFR++VTG FEKF +VTM L Sbjct: 73 VKWKGKTTEELSES-VPFFREIVTGAFEKFIKVTMKL 108
>CFI_ARATH (P41088) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) (TRANSPARENT TESTA 5 protein) Length = 246 Score = 77.8 bits (190), Expect = 6e-15 Identities = 43/97 (44%), Positives = 55/97 (56%) Frame = +3 Query: 102 AVSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXXX 281 AV++L VD V F P + P S++ FL GAGVRG++I G F+ FT IGVYL+ Sbjct: 15 AVTKLHVDSVTFVPSVKSPASSNPLFLGGAGVRGLDIQGKFVIFTVIGVYLEGNAVPSLS 74 Query: 282 XXXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMIL 392 S FFR++VTG FEKF +VTM L Sbjct: 75 VKWKGKTTEELTES-IPFFREIVTGAFEKFIKVTMKL 110
>CFI_RAPSA (O22651) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 247 Score = 75.1 bits (183), Expect = 4e-14 Identities = 42/94 (44%), Positives = 51/94 (54%) Frame = +3 Query: 111 ELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXXXXXX 290 +L+VD V FPP P S++ FL GAGVRG+EI G F+ FT IGVYL Sbjct: 15 KLQVDSVTFPPSVISPASSNTLFLGGAGVRGLEIQGKFVIFTVIGVYLDPVSVPSLSVKW 74 Query: 291 XXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMIL 392 S FFR++V G FEKF +VTM L Sbjct: 75 EGKTTEELTES-VPFFREIVIGAFEKFIKVTMKL 107
>CFI_PHAVU (P14298) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 221 Score = 66.2 bits (160), Expect = 2e-11 Identities = 35/96 (36%), Positives = 53/96 (55%) Frame = +3 Query: 105 VSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXXXX 284 +++++V+ + FP + P +A +FL GAG RG+ I G FIKFTAIGVYL+ Sbjct: 7 ITDVQVEFLHFPAVVTSPATAKTYFLGGAGERGLTIEGKFIKFTAIGVYLE-DKAVASLA 65 Query: 285 XXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMIL 392 + F+RD+++G FEK R + IL Sbjct: 66 TKWKGKPSEELINTLDFYRDIISGPFEKLIRGSKIL 101
>CFI_PUELO (Q43056) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 224 Score = 65.1 bits (157), Expect = 4e-11 Identities = 35/96 (36%), Positives = 50/96 (52%) Frame = +3 Query: 105 VSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXXXX 284 +S ++V+ + FP + P S +FL GAG RG+ I G FIKFT IGVYL+ Sbjct: 10 ISAVQVEFLEFPAVVTSPASGRTYFLGGAGERGLTIEGKFIKFTGIGVYLEDKAVSSLAA 69 Query: 285 XXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMIL 392 + F+RD+++G FEK R + IL Sbjct: 70 KWKGKPSEELVET-LDFYRDIISGPFEKLIRGSKIL 104
>CFI1_MEDSA (P28012) Chalcone--flavonone isomerase 1 (EC 5.5.1.6) (Chalcone| isomerase 1) Length = 222 Score = 62.8 bits (151), Expect = 2e-10 Identities = 32/96 (33%), Positives = 52/96 (54%) Frame = +3 Query: 102 AVSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXXX 281 +++ + V+ + +P + P + ++FL GAG RG+ I G+FIKFTAIGVYL+ Sbjct: 4 SITAITVENLEYPAVVTSPVTGKSYFLGGAGERGLTIEGNFIKFTAIGVYLEDIAVASLA 63 Query: 282 XXXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMI 389 + F+RD+++G FEK R + I Sbjct: 64 AKWKGKSSEELLET-LDFYRDIISGPFEKLIRGSKI 98
>CFI_PEA (P41089) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 223 Score = 56.6 bits (135), Expect = 1e-08 Identities = 32/85 (37%), Positives = 42/85 (49%) Frame = +3 Query: 135 FPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXXXXXXXXXXXXXX 314 FP + P + + FL GAG RG+ I G FIKFT IGVYL+ Sbjct: 17 FPAVVTSPVTENHIFLGGAGERGLTINGTFIKFTCIGVYLEDKADKSLATKWEGKLEELL 76 Query: 315 XXSDAAFFRDVVTGEFEKFTRVTMI 389 D F+RD+++G FEK R + I Sbjct: 77 ETLD--FYRDIISGPFEKLIRRSKI 99
>CFI2_MEDSA (P28013) Chalcone--flavonone isomerase 2 (EC 5.5.1.6) (Chalcone| isomerase 2) (Fragment) Length = 197 Score = 54.3 bits (129), Expect = 7e-08 Identities = 29/73 (39%), Positives = 40/73 (54%) Frame = +3 Query: 171 AHFLAGAGVRGMEIGGHFIKFTAIGVYLQXXXXXXXXXXXXXXXXXXXXXSDAAFFRDVV 350 ++FL GAG RG+ I G+FIKFTAIGVYL+ + F+RD++ Sbjct: 2 SYFLGGAGERGLTIEGNFIKFTAIGVYLEDIAVASLAAKWKGKSSEELLET-LDFYRDII 60 Query: 351 TGEFEKFTRVTMI 389 +G FEK R + I Sbjct: 61 SGPFEKLIRGSKI 73
>IF2_AGRT5 (Q8UJ51) Translation initiation factor IF-2| Length = 913 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 7 PVRPRLARSHPPTPAPIVCSLRAIRPSIHIP 99 PV+P +A P PAP+ +A +P IH P Sbjct: 59 PVQPVVAAPKPAAPAPVAARPQAPQPRIHQP 89
>FA53C_MOUSE (Q8BXQ8) Protein FAM53C| Length = 393 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -1 Query: 256 CRYTPMAVNLMKWPPISIPRTPAPARKWAWAEPGGRASGG 137 CR + V+L +W P+ PAP++ W + G A GG Sbjct: 118 CRSLSVPVDLSRWQPVW---RPAPSKLWTPIKHRGNAGGG 154
>FAS_CHICK (P12276) Fatty acid synthase (EC 2.3.1.85) [Includes:| [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl- Length = 2511 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 9/55 (16%) Frame = +3 Query: 48 CPHRLLATCHPSVDTHTMA---------VSELEVDGVVFPPLARPPGSAHAHFLA 185 CP ++ CH S DT T++ V++L+ DGV + R + H++++A Sbjct: 632 CPPNVVPACHNSEDTVTVSGPLDSVSEFVTKLKKDGVFAKEVRRAGVAFHSYYMA 686
>DUS8_HUMAN (Q13202) Dual specificity protein phosphatase 8 (EC 3.1.3.48) (EC| 3.1.3.16) (Dual specificity protein phosphatase hVH-5) Length = 625 Score = 29.6 bits (65), Expect = 1.8 Identities = 10/27 (37%), Positives = 16/27 (59%) Frame = -1 Query: 217 PPISIPRTPAPARKWAWAEPGGRASGG 137 PP+ P TP+P W ++ G + +GG Sbjct: 510 PPLDSPGTPSPDGPWCFSPEGAQGAGG 536
>IF2_TREPA (O83861) Translation initiation factor IF-2| Length = 842 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = -3 Query: 119 LQLRHGHGMCIDGRMARSEQTMGAGVGGCDLARRG 15 ++LR +G C +GR+ S G G+ + RRG Sbjct: 494 MELRANYGCCAEGRIIESRIDHGRGIVASVIVRRG 528
>GRP3_DAUCA (P37705) Glycine-rich protein A3| Length = 195 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/39 (35%), Positives = 17/39 (43%) Frame = +3 Query: 135 FPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVY 251 +PP GS+ H GV GM GG A GV+ Sbjct: 81 YPPAGHHSGSSAPHHSGHGGVAGMVAGGRAAAAAAYGVH 119
>FA53C_PONPY (Q5R815) Protein FAM53C| Length = 392 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = -1 Query: 256 CRYTPMAVNLMKWPPISIPRTPAPARKWAWAEPGGRASGG 137 CR + V+L +W P+ PAP++ W + G GG Sbjct: 118 CRSLSVPVDLSRWQPV---WRPAPSKLWTPIKHRGSGGGG 154
>FA53C_HUMAN (Q9NYF3) Protein FAM53C| Length = 392 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = -1 Query: 256 CRYTPMAVNLMKWPPISIPRTPAPARKWAWAEPGGRASGG 137 CR + V+L +W P+ PAP++ W + G GG Sbjct: 118 CRSLSVPVDLSRWQPV---WRPAPSKLWTPIKHRGSGGGG 154
>CFI_SOYBN (O81980) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) (Fragment) Length = 172 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/54 (29%), Positives = 24/54 (44%) Frame = +3 Query: 231 FTAIGVYLQXXXXXXXXXXXXXXXXXXXXXSDAAFFRDVVTGEFEKFTRVTMIL 392 +T IGVYL+ + F+RD+++G FEK R + IL Sbjct: 1 YTGIGVYLEDKAVPSLAAKWKGKTSEELVHT-LHFYRDIISGPFEKLIRGSKIL 53
>TENN_HUMAN (Q9UQP3) Tenascin-N precursor (TN-N)| Length = 1299 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -3 Query: 104 GHGMCIDGRMARSEQTMGAGVG 39 GHG C+DGR E +GA G Sbjct: 177 GHGRCVDGRCLCHEPYVGADCG 198
>SHAN2_RAT (Q9QX74) SH3 and multiple ankyrin repeat domains protein 2 (Shank2)| (Proline-rich synapse-associated protein 1) (ProSAP1) (Cortactin-binding protein 1) (CortBP1) (GKAP/SAPAP-interacting protein) (SPANK-3) Length = 1474 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Frame = +3 Query: 36 PTYPCPHRLLATCHPSVDTHTMAVSELEVDGVVFPPLA--RPPGSAHA 173 P P ++ H S + + E + DG V PP A PPGSA A Sbjct: 1169 PPVPPKPKMKPIVHKSNALYQDTLPEEDTDGFVIPPPAPPPPPGSAQA 1216 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,904,583 Number of Sequences: 219361 Number of extensions: 543709 Number of successful extensions: 2275 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 2162 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2258 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
