ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast47d10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108740.1| Zea mays PCO118291 mRNA sequence Length = 967 Score = 151 bits (76), Expect = 2e-33 Identities = 178/212 (83%) Strand = Plus / Plus Query: 83 gtggtggagcgggcggtggcggacgcggaggcgagtggcgccgcggtgctcacgctgggg 142 ||||||||| |||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 63 gtggtggagaaggcggtggcggacgcggaggcgagtggcgcgagagtactcacgctgggt 122 Query: 143 ctcctgaaccaggggtacgagctgaaccggaacggggagctgtacgtgatcaggaagcct 202 || |||||||||| ||||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 123 ctactgaaccaggcaaacgagctgaacaaaaacggcgagctgtacgtcatcaggaagccc 182 Query: 203 gaactgaaaacgaagatcgtcgacggcaccagcctcgccgtcgccgccgtgctccacatg 262 ||| || |||||||||||||| || ||||| |||| ||||||||||||||||||| Sbjct: 183 agcatgaggaccaagatcgtcgacgggacaagcctggccgccgccgccgtgctccacatg 242 Query: 263 atccctcggggcgccaacgacgtgctcctcct 294 |||||| |||| || |||| ||||||||||| Sbjct: 243 atccctgagggcaccgacgaggtgctcctcct 274
>ref|XM_468372.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2219 Score = 111 bits (56), Expect = 2e-21 Identities = 137/164 (83%) Strand = Plus / Plus Query: 131 ctcacgctggggctcctgaaccaggggtacgagctgaaccggaacggggagctgtacgtg 190 |||||||| || ||||| |||||||||||||| |||||| ||||||||||| | || || Sbjct: 1307 ctcacgctcggcctcctcaaccaggggtacgatctgaacaggaacggggagttatatgtc 1366 Query: 191 atcaggaagcctgaactgaaaacgaagatcgtcgacggcaccagcctcgccgtcgccgcc 250 |||||||||| ||||| |||||||||||||| || || |||||||| || || ||| Sbjct: 1367 gtcaggaagccaagcctgaagacgaagatcgtcgatggaacaagcctcgctgttgctgcc 1426 Query: 251 gtgctccacatgatccctcggggcgccaacgacgtgctcctcct 294 || ||| |||||||||||| |||| |||| || ||||||||||| Sbjct: 1427 gttctcaacatgatccctcagggcaccaaagatgtgctcctcct 1470
>dbj|AK068166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134I09, full insert sequence Length = 2219 Score = 111 bits (56), Expect = 2e-21 Identities = 137/164 (83%) Strand = Plus / Plus Query: 131 ctcacgctggggctcctgaaccaggggtacgagctgaaccggaacggggagctgtacgtg 190 |||||||| || ||||| |||||||||||||| |||||| ||||||||||| | || || Sbjct: 1307 ctcacgctcggcctcctcaaccaggggtacgatctgaacaggaacggggagttatatgtc 1366 Query: 191 atcaggaagcctgaactgaaaacgaagatcgtcgacggcaccagcctcgccgtcgccgcc 250 |||||||||| ||||| |||||||||||||| || || |||||||| || || ||| Sbjct: 1367 gtcaggaagccaagcctgaagacgaagatcgtcgatggaacaagcctcgctgttgctgcc 1426 Query: 251 gtgctccacatgatccctcggggcgccaacgacgtgctcctcct 294 || ||| |||||||||||| |||| |||| || ||||||||||| Sbjct: 1427 gttctcaacatgatccctcagggcaccaaagatgtgctcctcct 1470
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 93.7 bits (47), Expect = 4e-16 Identities = 119/143 (83%) Strand = Plus / Minus Query: 152 caggggtacgagctgaaccggaacggggagctgtacgtgatcaggaagcctgaactgaaa 211 ||||||||||| |||||| ||||||||||| | || || |||||||||| ||||| Sbjct: 34909647 caggggtacgatctgaacaggaacggggagttatatgtcgtcaggaagccaagcctgaag 34909588 Query: 212 acgaagatcgtcgacggcaccagcctcgccgtcgccgccgtgctccacatgatccctcgg 271 |||||||||||||| || || |||||||| || || ||||| ||| |||||||||||| | Sbjct: 34909587 acgaagatcgtcgatggaacaagcctcgctgttgctgccgttctcaacatgatccctcag 34909528 Query: 272 ggcgccaacgacgtgctcctcct 294 ||| |||| || ||||||||||| Sbjct: 34909527 ggcaccaaagatgtgctcctcct 34909505 Score = 44.1 bits (22), Expect = 0.35 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 219 tcgtcgacggcaccagc-ctcgccgtcgccgccg 251 |||||||||||| |||| |||||||||||||||| Sbjct: 3566577 tcgtcgacggcatcagcgctcgccgtcgccgccg 3566610 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 91 gcgggcggtggcggacgcggaggcg 115 |||||||| |||||||||||||||| Sbjct: 4240505 gcgggcggcggcggacgcggaggcg 4240481 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 23382494 cgccgtcgccgccgtgctcc 23382513 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 23358396 cgccgtcgccgccgtgctcc 23358415 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 gcaccagcctcgccgtcgcc 247 |||||||||||||||||||| Sbjct: 19100923 gcaccagcctcgccgtcgcc 19100904 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 cgggcggtggcggacgcggaggcg 115 |||||||||||||| ||||||||| Sbjct: 8163976 cgggcggtggcggaggcggaggcg 8163999
>dbj|AP005691.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0053L11 Length = 147123 Score = 93.7 bits (47), Expect = 4e-16 Identities = 119/143 (83%) Strand = Plus / Minus Query: 152 caggggtacgagctgaaccggaacggggagctgtacgtgatcaggaagcctgaactgaaa 211 ||||||||||| |||||| ||||||||||| | || || |||||||||| ||||| Sbjct: 131242 caggggtacgatctgaacaggaacggggagttatatgtcgtcaggaagccaagcctgaag 131183 Query: 212 acgaagatcgtcgacggcaccagcctcgccgtcgccgccgtgctccacatgatccctcgg 271 |||||||||||||| || || |||||||| || || ||||| ||| |||||||||||| | Sbjct: 131182 acgaagatcgtcgatggaacaagcctcgctgttgctgccgttctcaacatgatccctcag 131123 Query: 272 ggcgccaacgacgtgctcctcct 294 ||| |||| || ||||||||||| Sbjct: 131122 ggcaccaaagatgtgctcctcct 131100
>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_E04 Length = 118192 Score = 93.7 bits (47), Expect = 4e-16 Identities = 119/143 (83%) Strand = Plus / Minus Query: 152 caggggtacgagctgaaccggaacggggagctgtacgtgatcaggaagcctgaactgaaa 211 ||||||||||| |||||| ||||||||||| | || || |||||||||| ||||| Sbjct: 69144 caggggtacgatctgaacaggaacggggagttatatgtcgtcaggaagccaagcctgaag 69085 Query: 212 acgaagatcgtcgacggcaccagcctcgccgtcgccgccgtgctccacatgatccctcgg 271 |||||||||||||| || || |||||||| || || ||||| ||| |||||||||||| | Sbjct: 69084 acgaagatcgtcgatggaacaagcctcgctgttgctgccgttctcaacatgatccctcag 69025 Query: 272 ggcgccaacgacgtgctcctcct 294 ||| |||| || ||||||||||| Sbjct: 69024 ggcaccaaagatgtgctcctcct 69002
>ref|XM_479392.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1140 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 234 gcctcgccgtcgccgccgtgctcc 257 |||||||||||||||||||||||| Sbjct: 182 gcctcgccgtcgccgccgtgctcc 205
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 234 gcctcgccgtcgccgccgtgctcc 257 |||||||||||||||||||||||| Sbjct: 27526198 gcctcgccgtcgccgccgtgctcc 27526221
>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0018C07 Length = 141707 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 234 gcctcgccgtcgccgccgtgctcc 257 |||||||||||||||||||||||| Sbjct: 90169 gcctcgccgtcgccgccgtgctcc 90192
>ref|XM_464236.1| Oryza sativa (japonica cultivar-group), mRNA Length = 504 Score = 44.1 bits (22), Expect = 0.35 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 219 tcgtcgacggcaccagc-ctcgccgtcgccgccg 251 |||||||||||| |||| |||||||||||||||| Sbjct: 127 tcgtcgacggcatcagcgctcgccgtcgccgccg 160
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Minus Query: 94 ggcggtggcggacgcggaggcgagtggcgccgcggtgc 131 ||||| |||||| | ||||||||||||||||| ||||| Sbjct: 13382338 ggcggcggcggaggaggaggcgagtggcgccggggtgc 13382301 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 18031143 cgccgtcgccgccgtgctcc 18031124
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 218 atcgtcgacggcaccagcctcg 239 |||||||||||||||||||||| Sbjct: 265276 atcgtcgacggcaccagcctcg 265255
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 ccgggtggtggagcgggcggtg 100 |||||||||||||||||||||| Sbjct: 113920 ccgggtggtggagcgggcggtg 113899
>dbj|AP005449.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427E01 Length = 146395 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Minus Query: 94 ggcggtggcggacgcggaggcgagtggcgccgcggtgc 131 ||||| |||||| | ||||||||||||||||| ||||| Sbjct: 144148 ggcggcggcggaggaggaggcgagtggcgccggggtgc 144111
>dbj|AP003952.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1294_G12 Length = 121979 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Minus Query: 94 ggcggtggcggacgcggaggcgagtggcgccgcggtgc 131 ||||| |||||| | ||||||||||||||||| ||||| Sbjct: 43770 ggcggcggcggaggaggaggcgagtggcgccggggtgc 43733
>dbj|AP004863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0023I17 Length = 141852 Score = 44.1 bits (22), Expect = 0.35 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 219 tcgtcgacggcaccagc-ctcgccgtcgccgccg 251 |||||||||||| |||| |||||||||||||||| Sbjct: 111372 tcgtcgacggcatcagcgctcgccgtcgccgccg 111405
>dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0085K21 Length = 180714 Score = 44.1 bits (22), Expect = 0.35 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 219 tcgtcgacggcaccagc-ctcgccgtcgccgccg 251 |||||||||||| |||| |||||||||||||||| Sbjct: 47867 tcgtcgacggcatcagcgctcgccgtcgccgccg 47900
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 79 ccgggtggtggagcgggcggtg 100 |||||||||||||||||||||| Sbjct: 1798845 ccgggtggtggagcgggcggtg 1798866
>ref|XM_475718.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1014 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 cctcgccgtcgccgccgtgctccac 259 |||||| |||||||||||||||||| Sbjct: 36 cctcgcggtcgccgccgtgctccac 60
>ref|NM_196220.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNAa0019N10.22), mRNA Length = 714 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcca 258 ||||||||||||||||||||| Sbjct: 458 cgccgtcgccgccgtgctcca 438
>gb|AC148759.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0030K09, complete sequence Length = 143355 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 223 cgacggcaccagcctcgccgtcgccgccg 251 ||||||| |||||||||||| |||||||| Sbjct: 51650 cgacggctccagcctcgccgccgccgccg 51678
>gb|AC091732.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0091O09, complete sequence Length = 123427 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcca 258 ||||||||||||||||||||| Sbjct: 16811 cgccgtcgccgccgtgctcca 16791
>gb|AC137745.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0041J18, complete sequence Length = 129523 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 223 cgacggcaccagcctcgccgtcgccgccg 251 ||||||| |||||||||||| |||||||| Sbjct: 118511 cgacggctccagcctcgccgccgccgccg 118539
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 cctcgccgtcgccgccgtgctccac 259 |||||| |||||||||||||||||| Sbjct: 97629 cctcgcggtcgccgccgtgctccac 97605
>gb|AC124213.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0019N10, from chromosome 10, complete sequence Length = 148704 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcca 258 ||||||||||||||||||||| Sbjct: 105515 cgccgtcgccgccgtgctcca 105495
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcca 258 ||||||||||||||||||||| Sbjct: 11959833 cgccgtcgccgccgtgctcca 11959813 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 9538838 cgccgtcgccgccgtgctcc 9538819 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 6465882 cgccgtcgccgccgtgctcc 6465863 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 2624135 cgccgtcgccgccgtgctcc 2624154
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 gcggtggcggacgcggaggcg 115 ||||||||||||||||||||| Sbjct: 17657776 gcggtggcggacgcggaggcg 17657756
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 cctcgccgtcgccgccgtgctccac 259 |||||| |||||||||||||||||| Sbjct: 25457268 cctcgcggtcgccgccgtgctccac 25457244 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctccacat 261 ||||||||||||||| |||||||| Sbjct: 19641503 cgccgtcgccgccgtcctccacat 19641526
>dbj|AP004838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0504A05 Length = 148360 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 91 gcgggcggtggcggacgcggaggcg 115 |||||||| |||||||||||||||| Sbjct: 57319 gcgggcggcggcggacgcggaggcg 57295
>dbj|AP005676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1005_D12 Length = 150588 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 95 gcggtggcggacgcggaggcg 115 ||||||||||||||||||||| Sbjct: 106498 gcggtggcggacgcggaggcg 106478
>dbj|AK065245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002I17, full insert sequence Length = 1327 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 cctcgccgtcgccgccgtgctccac 259 |||||| |||||||||||||||||| Sbjct: 86 cctcgcggtcgccgccgtgctccac 110
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 cgcggtgctcacgctggggct 144 ||||||||||||||||||||| Sbjct: 2213459 cgcggtgctcacgctggggct 2213479
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcca 258 ||||||||||||||||||||| Sbjct: 11967173 cgccgtcgccgccgtgctcca 11967153 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 9544877 cgccgtcgccgccgtgctcc 9544858 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 6467868 cgccgtcgccgccgtgctcc 6467849 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 2624086 cgccgtcgccgccgtgctcc 2624105
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 223 cgacggcaccagcctcgccgtcgccgccg 251 ||||||| |||||||||||| |||||||| Sbjct: 16681746 cgacggctccagcctcgccgccgccgccg 16681774
>ref|NM_187890.1| Oryza sativa (japonica cultivar-group), Ozsa8332 predicted mRNA Length = 1836 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ggagcgggcggtggcggacg 107 |||||||||||||||||||| Sbjct: 932 ggagcgggcggtggcggacg 951
>ref|NM_195371.1| Oryza sativa (japonica cultivar-group) putative gag-pol precursor (OSJNBa0041L14.26), mRNA Length = 2379 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 73 cgccgtcgccgccgtgctcc 54
>ref|NM_194818.1| Oryza sativa (japonica cultivar-group) putative gag-pol polyprotein (OSJNBa0034A02.16), mRNA Length = 966 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 73 cgccgtcgccgccgtgctcc 54
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cctcgccgtcgccgccgtgc 254 |||||||||||||||||||| Sbjct: 3436796 cctcgccgtcgccgccgtgc 3436815
>ref|NM_191433.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1215 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 426 cgccgtcgccgccgtgctcc 445
>ref|NM_193305.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 414 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 322 cgccgtcgccgccgtgctcc 303
>ref|NM_193295.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 807 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 547 cgccgtcgccgccgtgctcc 528
>ref|NM_193293.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 864 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 604 cgccgtcgccgccgtgctcc 585
>ref|NM_199837.1| Danio rerio zgc:63483 (zgc:63483), mRNA Length = 2170 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 cgggtggtggagcgggcggtggcg 103 |||| ||||||||||||||||||| Sbjct: 1420 cgggaggtggagcgggcggtggcg 1443
>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence Length = 1207381 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 gtggagcgggcggtggcgga 105 |||||||||||||||||||| Sbjct: 341674 gtggagcgggcggtggcgga 341693
>ref|XM_868039.1| PREDICTED: Bos taurus similar to protocadherin alpha 13 isoform 2 precursor (LOC616072), mRNA Length = 2463 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 70 cgcggtgagccgggtggtggagcgggcggtgg 101 ||||||||||| |||||||| |||| |||||| Sbjct: 1725 cgcggtgagccaggtggtggcgcggtcggtgg 1756
>ref|XM_868027.1| PREDICTED: Bos taurus similar to protocadherin alpha 3 isoform 2 precursor (LOC616061), mRNA Length = 2277 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 70 cgcggtgagccgggtggtggagcgggcggtgg 101 ||||||||||| |||||||| |||| |||||| Sbjct: 1596 cgcggtgagccaggtggtggcgcggtcggtgg 1627
>ref|XM_587968.2| PREDICTED: Bos taurus similar to protocadherin alpha 4 isoform 2 precursor (LOC539540), mRNA Length = 2397 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 70 cgcggtgagccgggtggtggagcgggcggtgg 101 ||||||||||| |||||||| |||| |||||| Sbjct: 1725 cgcggtgagccaggtggtggcgcggtcggtgg 1756
>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11, complete sequence Length = 102567 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctccacat 261 ||||||||||||||| |||||||| Sbjct: 101402 cgccgtcgccgccgtcctccacat 101425
>gb|BC060522.1| Danio rerio zgc:63483, mRNA (cDNA clone MGC:63483 IMAGE:2601702), complete cds Length = 2170 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 cgggtggtggagcgggcggtggcg 103 |||| ||||||||||||||||||| Sbjct: 1420 cgggaggtggagcgggcggtggcg 1443
>gb|AC105319.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1657_H11, complete sequence Length = 98103 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctccacat 261 ||||||||||||||| |||||||| Sbjct: 6512 cgccgtcgccgccgtcctccacat 6535
>emb|AL137797.9| Human DNA sequence from clone RP5-1109J22 on chromosome 1 Contains three novel genes, the OTX3 gene for orthodenticle homolog 3 (Drosophila) and a CpG island, complete sequence Length = 105345 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 351 tccaggttcgggtggtggacgcgg 374 ||||||||||||||| |||||||| Sbjct: 43255 tccaggttcgggtgggggacgcgg 43278
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 ccgtgctggcccaggccctc 337 |||||||||||||||||||| Sbjct: 751117 ccgtgctggcccaggccctc 751136
>gb|AC099042.9| Oryza sativa chromosome 10 BAC OSJNBa0041L14 genomic sequence, complete sequence Length = 158742 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 136698 cgccgtcgccgccgtgctcc 136717
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 71 gcggtgagccgggtggtggagcgggcgg 98 ||||||||||||||||||| ||||||| Sbjct: 269671 gcggtgagccgggtggtggcccgggcgg 269644
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 gcaccagcctcgccgtcgcc 247 |||||||||||||||||||| Sbjct: 68961 gcaccagcctcgccgtcgcc 68980
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cggcaccagcctcgccgtcg 245 |||||||||||||||||||| Sbjct: 212439 cggcaccagcctcgccgtcg 212420
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 tggtggagcgggcggtggcggacg 107 |||||||||||||| ||||||||| Sbjct: 106665 tggtggagcgggcgctggcggacg 106688
>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12, complete sequence Length = 179644 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 16391 cgccgtcgccgccgtgctcc 16410 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 10472 cgccgtcgccgccgtgctcc 10491
>emb|AL662936.4|OSJN00137 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0052P16, complete sequence Length = 155702 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 123904 cgccgtcgccgccgtgctcc 123885 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 114987 cgccgtcgccgccgtgctcc 114968
>gb|AC119148.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0035F15, complete sequence Length = 138335 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 26911 cgccgtcgccgccgtgctcc 26892
>dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0711E10 Length = 157903 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ggagcgggcggtggcggacg 107 |||||||||||||||||||| Sbjct: 24711 ggagcgggcggtggcggacg 24692
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cagcctcgccgtcgccgccgtgct 255 ||||| |||||||||||||||||| Sbjct: 143337 cagccgcgccgtcgccgccgtgct 143360
>gb|AC079852.3| Oryza sativa chromosome 10 clone OSJNBa0034A02, complete sequence Length = 185904 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 127015 cgccgtcgccgccgtgctcc 127034
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 219 tcgtcgacggcaccagcctcgccgtcgccgcc 250 ||||||||| |||| ||||||||||| ||||| Sbjct: 3179120 tcgtcgacgccacccgcctcgccgtcaccgcc 3179151 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 ctcgccgtcgccgccgtgct 255 |||||||||||||||||||| Sbjct: 3083331 ctcgccgtcgccgccgtgct 3083312
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 29879639 cgccgtcgccgccgtgctcc 29879658 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 29873720 cgccgtcgccgccgtgctcc 29873739 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 5423255 cgccgtcgccgccgtgctcc 5423236 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 5414338 cgccgtcgccgccgtgctcc 5414319
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 18172017 cgccgtcgccgccgtgctcc 18172036 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 6901582 cgccgtcgccgccgtgctcc 6901563
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 16417026 cgccgtcgccgccgtgctcc 16417045 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 16408092 cgccgtcgccgccgtgctcc 16408111
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 32605930 cgccgtcgccgccgtgctcc 32605911 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 20005076 cgccgtcgccgccgtgctcc 20005095 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 19996138 cgccgtcgccgccgtgctcc 19996157 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 19943491 cgccgtcgccgccgtgctcc 19943472 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 19934557 cgccgtcgccgccgtgctcc 19934538 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ggagcgggcggtggcggacg 107 |||||||||||||||||||| Sbjct: 8449558 ggagcgggcggtggcggacg 8449539
>gb|AE009723.1| Brucella melitensis 16M chromosome II, section 85 of 107 of the complete sequence Length = 10966 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 gtggagcgggcggtggcgga 105 |||||||||||||||||||| Sbjct: 126 gtggagcgggcggtggcgga 107
>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0062A24 Length = 148362 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 107985 cgccgtcgccgccgtgctcc 108004 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 99047 cgccgtcgccgccgtgctcc 99066 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 46400 cgccgtcgccgccgtgctcc 46381 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 37466 cgccgtcgccgccgtgctcc 37447
>dbj|AP004233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0065J17 Length = 139014 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 3038 cgccgtcgccgccgtgctcc 3057
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 82 ggtggtggagcgggcggtggcggacgcg 109 ||||||||||| ||||||||||| |||| Sbjct: 1468283 ggtggtggagccggcggtggcgggcgcg 1468256
>dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0695H10 Length = 136883 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 68725 cgccgtcgccgccgtgctcc 68706
>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0705D01 Length = 147174 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ggagcgggcggtggcggacg 107 |||||||||||||||||||| Sbjct: 64513 ggagcgggcggtggcggacg 64494
>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence Length = 1162204 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 gtggagcgggcggtggcgga 105 |||||||||||||||||||| Sbjct: 829973 gtggagcgggcggtggcgga 829954
>dbj|AP007273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0035K09 Length = 124866 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 13619 cgccgtcgccgccgtgctcc 13638
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0503B05 Length = 156814 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 cgggcggtggcggacgcggaggcg 115 |||||||||||||| ||||||||| Sbjct: 152169 cgggcggtggcggaggcggaggcg 152192
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cggcaccagcctcgccgtcg 245 |||||||||||||||||||| Sbjct: 4464153 cggcaccagcctcgccgtcg 4464172 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gcgggcggtggcggacgcgg 110 |||||||||||||||||||| Sbjct: 4340170 gcgggcggtggcggacgcgg 4340151
>dbj|AP006524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0077M23 Length = 167264 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 26793 cgccgtcgccgccgtgctcc 26774
>dbj|AP005929.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0071G09 Length = 169148 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 97449 cgccgtcgccgccgtgctcc 97430
>dbj|AP006457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0038P01 Length = 148506 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 95569 cgccgtcgccgccgtgctcc 95588 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 71471 cgccgtcgccgccgtgctcc 71490
>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0047A17 Length = 149142 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 gcaccagcctcgccgtcgcc 247 |||||||||||||||||||| Sbjct: 106444 gcaccagcctcgccgtcgcc 106425
>dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1653_F07, complete sequence Length = 110109 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 1169 cgccgtcgccgccgtgctcc 1188
>dbj|AP005523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0488B06 Length = 154764 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 27682 cgccgtcgccgccgtgctcc 27701 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 18748 cgccgtcgccgccgtgctcc 18767
>dbj|AP005520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0426E02 Length = 166985 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 122878 cgccgtcgccgccgtgctcc 122897 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 113944 cgccgtcgccgccgtgctcc 113963
>dbj|AK109736.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-C09, full insert sequence Length = 1563 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 467 cgccgtcgccgccgtgctcc 486
>dbj|AK069852.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036I06, full insert sequence Length = 1660 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 cgggcggtggcggacgcggaggcg 115 |||||||||||||| ||||||||| Sbjct: 219 cgggcggtggcggaggcggaggcg 242
>dbj|AK069576.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019J17, full insert sequence Length = 1140 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 gcctcgccgtcgccgccgtgctcc 257 |||||||||||||| ||||||||| Sbjct: 182 gcctcgccgtcgccaccgtgctcc 205
>emb|AJ628018.2| Streptomyces sp. SCC 2136 deoxysugar biosynthetic gene cluster Length = 77550 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 tcgccgtcgccgccgtgctccaca 260 ||||||||| |||||||||||||| Sbjct: 10740 tcgccgtcggcgccgtgctccaca 10763
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 cgggcggtggcggacgcggaggcg 115 |||||||| ||||||||||||||| Sbjct: 920103 cgggcggttgcggacgcggaggcg 920080
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 18098338 cgccgtcgccgccgtgctcc 18098357 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 6901461 cgccgtcgccgccgtgctcc 6901442
>emb|AL731740.4|CNS08C7P Oryza sativa chromosome 12, . BAC OSJNBb0001P19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144563 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 60456 cgccgtcgccgccgtgctcc 60475
>emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06, complete sequence Length = 178552 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 160562 cgccgtcgccgccgtgctcc 160581 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 154646 cgccgtcgccgccgtgctcc 154665
>emb|AL845343.5|CNS08CB5 Oryza sativa chromosome 12, . BAC OSJNBa0028O09 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155927 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgccgtcgccgccgtgctcc 257 |||||||||||||||||||| Sbjct: 125695 cgccgtcgccgccgtgctcc 125714
>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence, strain 2308 Length = 1156948 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 gtggagcgggcggtggcgga 105 |||||||||||||||||||| Sbjct: 829952 gtggagcgggcggtggcgga 829933 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,369,942 Number of Sequences: 3902068 Number of extensions: 2369942 Number of successful extensions: 66714 Number of sequences better than 10.0: 95 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 62419 Number of HSP's gapped (non-prelim): 4294 length of query: 404 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 382 effective length of database: 17,147,199,772 effective search space: 6550230312904 effective search space used: 6550230312904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
