ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast47d07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TBX21_HUMAN (Q9UL17) T-box transcription factor TBX21 (T-box pro... 33 0.16
2FA53C_MOUSE (Q8BXQ8) Protein FAM53C 30 1.8
3FA53C_PONPY (Q5R815) Protein FAM53C 30 1.8
4ARGB_BIFLO (P59295) Acetylglutamate kinase (EC 2.7.2.8) (NAG kin... 29 2.4
5PNAA_PRUDU (P81898) Peptide-N4-(N-acetyl-beta-glucosaminyl)aspar... 29 3.1
6MEC3_CAEBR (P34764) Mechanosensory protein 3 29 3.1
7PDXH_NITWN (Q3SV02) Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.... 28 4.0
8CDH_ECOL6 (Q8FBC8) CDP-diacylglycerol pyrophosphatase (EC 3.6.1.... 28 4.0
9FA53C_HUMAN (Q9NYF3) Protein FAM53C 28 5.3
10HME1_MOUSE (P09065) Homeobox protein engrailed-1 (Mo-En-1) 28 6.9
11AST1_YEAST (P35183) Protein AST1 28 6.9
12IE18_PRVKA (P33479) Immediate-early protein IE180 27 9.0
13PROB2_PSEHT (Q3IHK8) Glutamate 5-kinase 2 (EC 2.7.2.11) (Gamma-g... 27 9.0
14CF141_HUMAN (Q5SZD1) Protein C6orf141 27 9.0
15ACOX_RALEU (P27748) Acetoin catabolism protein X 27 9.0

>TBX21_HUMAN (Q9UL17) T-box transcription factor TBX21 (T-box protein 21)|
           (Transcription factor TBLYM) (T-cell-specific T-box
           transcription factor T-bet)
          Length = 535

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 19/54 (35%), Positives = 21/54 (38%)
 Frame = +1

Query: 166 PPSQVGSLPSVRPRHRAVVLPANCLLAHERTSPASLSSNYEAPISDPCPPDRFI 327
           P S  G  P   P+HR          A ER    SL S Y      P PP RF+
Sbjct: 19  PGSDEGRAPGADPQHRYFYPEPGAQDADERRGGGSLGSPYPGGALVPAPPSRFL 72



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>FA53C_MOUSE (Q8BXQ8) Protein FAM53C|
          Length = 393

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 29/76 (38%), Positives = 32/76 (42%), Gaps = 15/76 (19%)
 Frame = +1

Query: 163 SPPSQVGSL-----PSVR----PRHRAVVLPANCL-LAHER-----TSPASLSSNYEAPI 297
           SPP +V SL     PS      P HR    P   L LA +      TSP S S   +A  
Sbjct: 162 SPPKRVSSLRFLQAPSASSQCAPAHRPYSPPFFSLALAQDSAQPCATSPQSGSWESDAES 221

Query: 298 SDPCPPDRFIFLRPVL 345
             PCPP R   L P L
Sbjct: 222 LSPCPPQRRFSLSPSL 237



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>FA53C_PONPY (Q5R815) Protein FAM53C|
          Length = 392

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 29/76 (38%), Positives = 32/76 (42%), Gaps = 15/76 (19%)
 Frame = +1

Query: 163 SPPSQVGSL-----PSVR----PRHRAVVLPANCL-LAHER-----TSPASLSSNYEAPI 297
           SPP +V SL     PS      P HR    P   L LA +      TSP S S   +A  
Sbjct: 162 SPPKRVSSLRFLQAPSASSQCAPAHRPYSPPFFSLALAQDSSRPCATSPQSGSWESDAES 221

Query: 298 SDPCPPDRFIFLRPVL 345
             PCPP R   L P L
Sbjct: 222 LSPCPPQRRFSLSPSL 237



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>ARGB_BIFLO (P59295) Acetylglutamate kinase (EC 2.7.2.8) (NAG kinase) (AGK)|
           (N-acetyl-L-glutamate 5-phosphotransferase)
          Length = 305

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = -2

Query: 342 DWPQKNKSVRRAGIGYWSLVVGGERRRARPLMRQQAVGRQHDGAVPRPH 196
           DWP KN  + R G+     ++       RP M  +A  R  DG VP+ H
Sbjct: 221 DWPDKNSLIGRIGVENLRDMLPDLESGMRPKM--EACVRAIDGGVPQAH 267



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>PNAA_PRUDU (P81898) Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase|
           A (EC 3.5.1.52) (PNGase A) (Glycopeptide N-glycosidase)
           (N-glycanase) [Contains:
           Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine
           amidase A light chain (PNGase A small chain)
          Length = 571

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -3

Query: 215 ARCRGRTDGRE-PTWLGGEEKVRCCSAR*RPTG 120
           A CR R   R    WLGG E +R C+A  RP G
Sbjct: 70  ATCRRRQFDRIFGVWLGGVEILRSCTAEPRPNG 102



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>MEC3_CAEBR (P34764) Mechanosensory protein 3|
          Length = 318

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 226 PANCLLAHERTSPASLSSNYEAPISDPCPP 315
           P   +L  +     S  S+Y  P+ DPCPP
Sbjct: 127 PGEQILVDDTMMTVSCMSHYPLPMDDPCPP 156



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>PDXH_NITWN (Q3SV02) Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP|
           oxidase) (PNPOx)
          Length = 213

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 8/50 (16%)
 Frame = -2

Query: 315 RRAGIGYWSLVVGGERRRARPLMR----QQAVGRQHD----GAVPRPHGW 190
           R+A IG W+       R++RPL      +QA+ ++      GAVPRP GW
Sbjct: 128 RQAQIGAWA------SRQSRPLESRLAFEQAIAKEAAKYAIGAVPRPPGW 171



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>CDH_ECOL6 (Q8FBC8) CDP-diacylglycerol pyrophosphatase (EC 3.6.1.26)|
           (CDP-diacylglycerol phosphatidylhydrolase)
           (CDP-diglyceride hydrolase)
          Length = 251

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -2

Query: 321 SVRRAGIGYWSLVVGGERRRARPLMRQQAVGRQHDGAVPRP 199
           +V  AGIGYW L  G E    R ++ +Q +  Q +   P P
Sbjct: 15  AVVAAGIGYWKL-TGEESDTLRKIVLEQCLPNQQENQNPSP 54



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>FA53C_HUMAN (Q9NYF3) Protein FAM53C|
          Length = 392

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 28/76 (36%), Positives = 32/76 (42%), Gaps = 15/76 (19%)
 Frame = +1

Query: 163 SPPSQVGSL-----PSVR----PRHRAVVLPANCL-LAHERT-----SPASLSSNYEAPI 297
           SPP +V SL     PS      P HR    P   L LA + +     SP S S   +A  
Sbjct: 162 SPPKRVSSLRFLQAPSASSQCAPAHRPYSPPFFSLALAQDSSRPCAASPQSGSWESDAES 221

Query: 298 SDPCPPDRFIFLRPVL 345
             PCPP R   L P L
Sbjct: 222 LSPCPPQRRFSLSPSL 237



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>HME1_MOUSE (P09065) Homeobox protein engrailed-1 (Mo-En-1)|
          Length = 401

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = -3

Query: 227 GSTTARCRGRTD-GREPTWLGGEEKVRCCSAR*RPTGAAGPRDGGRLAPVAGA 72
           GS   R RG+T  GR+P    G       S    P    GP DG + A   GA
Sbjct: 146 GSRVERDRGQTGAGRDPVHSLGTRASGAASLLCAPDANCGPPDGSQPATAVGA 198



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>AST1_YEAST (P35183) Protein AST1|
          Length = 429

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +1

Query: 199 RPRHRAVVLPANCLLAHERTSPASLSSNYEAPISDPCPPDRFI 327
           RP      +P   L+ H +T P   S  YE  I  P P ++ +
Sbjct: 40  RPLRHVKFIPIKSLIFHTKTGPMDFS--YEKKIKTPIPKNKIV 80



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>IE18_PRVKA (P33479) Immediate-early protein IE180|
          Length = 1446

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 26/95 (27%), Positives = 32/95 (33%), Gaps = 2/95 (2%)
 Frame = +1

Query: 28  PQDCVAAPRDHGARGAPATXXXXXXXXXXXXXXXXHLAEQQRTFSSPPSQVGSL-PSVRP 204
           P     A  + GA G P                    A  +R   +    VG   P+ RP
Sbjct: 148 PTPAALAAAEAGAPGGPGRSSPSAASPASSSGSPGPSAAPRRWSPARGDPVGEPGPAARP 207

Query: 205 RHRAV-VLPANCLLAHERTSPASLSSNYEAPISDP 306
           R  A    PA    A  R  PAS +S    P+S P
Sbjct: 208 RTPAPPAQPAAVAAAPARRGPASPASPAAGPVSAP 242



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>PROB2_PSEHT (Q3IHK8) Glutamate 5-kinase 2 (EC 2.7.2.11) (Gamma-glutamyl kinase|
           2) (GK 2)
          Length = 367

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 20/118 (16%)
 Frame = -3

Query: 320 LSGGQGSDIG----AS*LEESDAG----------------LVRSCASKQLAGSTTARCRG 201
           L+GG G+++G    A+ L+ +D                  ++  C S+QL G+   +   
Sbjct: 200 LAGGSGTNLGTGGMATKLQAADIARRAGVEVIIAKGAGKNVILKCMSEQLPGTRFLKLTA 259

Query: 200 RTDGREPTWLGGEEKVRCCSAR*RPTGAAGPRDGGRLAPVAGAPLAPWSRGAATQSCG 27
             +GR+  WL                  AGP+  G++   AGA  A  ++GA+  + G
Sbjct: 260 PKEGRKK-WL-----------------LAGPKSSGQIVIDAGAITALQTKGASLLAKG 299



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>CF141_HUMAN (Q5SZD1) Protein C6orf141|
          Length = 244

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 9/39 (23%)
 Frame = -3

Query: 128 PTGAAGPRDGGR----LAPVA-----GAPLAPWSRGAAT 39
           P GAA P D  R    L P       GAPLAP +R  AT
Sbjct: 13  PQGAANPMDSSRSLGDLGPFPREVGRGAPLAPGARNPAT 51



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>ACOX_RALEU (P27748) Acetoin catabolism protein X|
          Length = 359

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/62 (27%), Positives = 26/62 (41%)
 Frame = -3

Query: 353 CCCRTGLKKINLSGGQGSDIGAS*LEESDAGLVRSCASKQLAGSTTARCRGRTDGREPTW 174
           C    G+  I + GG G+             +VR C +  +AG +T       + REPT 
Sbjct: 111 CMADAGVAAIIVLGGDGTH----------RAVVRECGAVPIAGLSTGTNNAYPEMREPTI 160

Query: 173 LG 168
           +G
Sbjct: 161 IG 162


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,194,166
Number of Sequences: 219361
Number of extensions: 901536
Number of successful extensions: 3339
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3330
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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