ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast47d06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK066999.1| Oryza sativa (japonica cultivar-group) cDNA clon... 539 e-150
2gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome... 214 2e-52
3gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome... 214 2e-52
4dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 214 2e-52
5ref|NM_001036386.1| Arabidopsis thaliana DNA binding / DNA topoi... 115 1e-22
6ref|NM_128760.2| Arabidopsis thaliana DNA binding / DNA topoisom... 115 1e-22
7gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D22 ma... 115 1e-22
8dbj|AK221174.1| Arabidopsis thaliana mRNA for putative DNA topoi... 115 1e-22
9emb|BX821034.1|CNS0A83Q Arabidopsis thaliana Full-length cDNA Co... 115 1e-22
10dbj|AK175923.1| Arabidopsis thaliana mRNA for putative DNA topoi... 115 1e-22
11dbj|AK175789.1| Arabidopsis thaliana mRNA for putative DNA topoi... 115 1e-22
12gb|AC147484.21| Medicago truncatula clone mth2-52b4, complete se... 96 1e-16
13ref|XM_515006.1| PREDICTED: Pan troglodytes similar to topoisome... 48 0.026
14dbj|AB179256.1| Macaca fascicularis testis cDNA clone: QtsA-1613... 48 0.026
15emb|Z78014.1|CEF42E8 Caenorhabditis elegans Cosmid F42E8, comple... 46 0.10
16ref|NM_073863.1| Caenorhabditis elegans F42E8.2 (F42E8.2) mRNA, ... 46 0.10
17ref|XM_658534.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 1.6
18ref|XM_790856.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 1.6
19gb|AC022311.5| Homo sapiens BAC clone RP11-146M24 from 2, comple... 42 1.6
20gb|DQ177331.1| Sus scrofa ADAMTS1 (ADAMTS1) gene, complete cds 42 1.6
21gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete... 40 6.3
22ref|XM_477078.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
23ref|NM_003935.3| Homo sapiens topoisomerase (DNA) III beta (TOP3... 40 6.3
24gb|AY176328.1| Kluyveromyces lactis CDP-diacylglycerol-glycerol-... 40 6.3
25gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
26gb|BC077740.1| Xenopus laevis methyl-CpG binding protein MBD3 lo... 40 6.3
27ref|XM_451376.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A08536g ... 40 6.3
28gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.3
29emb|BX901895.15| Zebrafish DNA sequence from clone CH211-218C11 ... 40 6.3
30gb|AC137073.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.3
31emb|AL161444.18| Human DNA sequence from clone RP11-312C2 on chr... 40 6.3
32emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 6.3
33emb|AL591391.5| Zebrafish DNA sequence from clone BUSM1-186F8 in... 40 6.3
34emb|AJ639658.1| Dugesia japonica pum gene for Pumilio homolog 40 6.3
35gb|BC002432.2| Homo sapiens topoisomerase (DNA) III beta, mRNA (... 40 6.3
36emb|CR625879.1| full-length cDNA clone CL0BB013ZD11 of Neuroblas... 40 6.3
37dbj|AK096695.1| Homo sapiens cDNA FLJ39376 fis, clone PERIC10000... 40 6.3
38emb|CR597544.1| full-length cDNA clone CS0DC004YD04 of Neuroblas... 40 6.3
39ref|XM_624959.1| PREDICTED: Apis mellifera similar to topoisomer... 40 6.3
40ref|XM_625162.1| PREDICTED: Apis mellifera similar to MGC53016 p... 40 6.3
41dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
42dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
43dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
44gb|AC145087.14| Mus musculus chromosome 1, clone RP23-255P18, co... 40 6.3
45dbj|AK100653.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
46dbj|AK099034.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
47dbj|AK072893.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
48dbj|AK061469.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
49emb|BX005479.5| Zebrafish DNA sequence from clone DKEY-209E8 in ... 40 6.3
50emb|CR456596.1| Homo sapiens TOP3B full length open reading fram... 40 6.3
51gb|AF125216.1|AF125216 Homo sapiens DNA topoisomerase III beta (... 40 6.3
52gb|AF053082.1|AF053082 Homo sapiens DNA topoisomerase III beta (... 40 6.3
53gb|AF017146.1|AF017146 Homo sapiens DNA topoisomerase III beta (... 40 6.3
54gb|AC006071.1|AC006071 Homo sapiens chromosome 17, clone hCIT.12... 40 6.3
55emb|BX005347.5| Zebrafish DNA sequence from clone DKEY-199K9 in ... 40 6.3
56gb|AF042332.1|AF042332 Oryza sativa subsp. japonica cycloartenol... 40 6.3
57emb|AL833505.1|HSM804818 Homo sapiens mRNA; cDNA DKFZp686C2037 (... 40 6.3
58emb|AL591418.11| Zebrafish DNA sequence from clone BUSM1-139E19 ... 40 6.3
59gb|AC171726.1| Lycopersicon esculentum chromosome 01 clone C01HB... 40 6.3 
>dbj|AK066999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092P06, full
            insert sequence
          Length = 3082

 Score =  539 bits (272), Expect = e-150
 Identities = 419/468 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    aggttgacatatacgagggaagcaccacggctcctgattaccttagtgagagtgaattga 60
            ||||||||||||| ||||| ||||||||  ||||||| ||||||||||||||||||||||
Sbjct: 1556 aggttgacatatatgagggtagcaccacacctcctgactaccttagtgagagtgaattga 1615

                                                                        
Query: 61   tctctctcatggagaagaatggcataggcacagatgcatcaattcctgtccatataaaca 120
            |||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||
Sbjct: 1616 tctctctcatggagaagaatggcataggtacagatgcatcaattcctgtgcatgtaaaca 1675

                                                                        
Query: 121  acatttcggagcgtaattatgtccaggtaaatactggaagaagattagtaccaacagccc 180
            |||| |  |||||||||||||| ||||| ||| | ||||||||||||||||||||| |||
Sbjct: 1676 acatctgcgagcgtaattatgttcaggtgaattccggaagaagattagtaccaacacccc 1735

                                                                        
Query: 181  tgggaactaccctgataagaggatatcagtgtattgatgccgatctctgcctgccagata 240
            ||||||||||  |||||||||| |||||||| |||||||| ||||| ||| | |||||||
Sbjct: 1736 tgggaactacattgataagagggtatcagtgcattgatgctgatctgtgcttaccagata 1795

                                                                        
Query: 241  tccgaagctttattgagcaacagattactctaattgcaaaaggaaaagctgatcatcttc 300
            ||||||| ||||||||||| |||||||||||||||||||||||  ||||||| |||||||
Sbjct: 1796 tccgaaggtttattgagcagcagattactctaattgcaaaaggtgaagctgaccatcttc 1855

                                                                        
Query: 301  aagtcattcaacatgttcttgaacagtttatgagaaagtactcttattttgtgaagaaga 360
            ||||  | || ||||||||| | |||||||||| ||||||||| || |||||||| ||||
Sbjct: 1856 aagttgtgcagcatgttcttcagcagtttatgaaaaagtactcgtactttgtgaaaaaga 1915

                                                                        
Query: 361  ttgaaaacatggatactttgttcgaagcacagttttcacctctggcagactctgggcgtc 420
            |||||||||||||| |||||||||||||||||||||||||| |||| |||||||| ||| 
Sbjct: 1916 ttgaaaacatggatgctttgttcgaagcacagttttcacctttggctgactctggacgtt 1975

                                                            
Query: 421  tattgagcaagtgtggaaaatgtggtcgatatatgaaatatatttcca 468
            || ||||||||||||||||||||| ||| |||||||| || |||||||
Sbjct: 1976 tactgagcaagtgtggaaaatgtgctcggtatatgaagtacatttcca 2023
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>gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0019D02, complete sequence
          Length = 154692

 Score =  214 bits (108), Expect = 2e-52
 Identities = 177/200 (88%)
 Strand = Plus / Plus

                                                                          
Query: 156    ggaagaagattagtaccaacagccctgggaactaccctgataagaggatatcagtgtatt 215
              ||||||||||||||||||||| |||||||||||||  |||||||||| |||||||| |||
Sbjct: 134393 ggaagaagattagtaccaacacccctgggaactacattgataagagggtatcagtgcatt 134452

                                                                          
Query: 216    gatgccgatctctgcctgccagatatccgaagctttattgagcaacagattactctaatt 275
              ||||| ||||| ||| | |||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 134453 gatgctgatctgtgcttaccagatatccgaaggtttattgagcagcagattactctaatt 134512

                                                                          
Query: 276    gcaaaaggaaaagctgatcatcttcaagtcattcaacatgttcttgaacagtttatgaga 335
              ||||||||  ||||||| |||||||||||  | || ||||||||| | |||||||||| |
Sbjct: 134513 gcaaaaggtgaagctgaccatcttcaagttgtgcagcatgttcttcagcagtttatgaaa 134572

                                  
Query: 336    aagtactcttattttgtgaa 355
              |||||||| || ||||||||
Sbjct: 134573 aagtactcgtactttgtgaa 134592



 Score =  176 bits (89), Expect = 4e-41
 Identities = 122/133 (91%)
 Strand = Plus / Plus

                                                                          
Query: 16     agggaagcaccacggctcctgattaccttagtgagagtgaattgatctctctcatggaga 75
              |||| ||||||||  ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 134125 agggtagcaccacacctcctgactaccttagtgagagtgaattgatctctctcatggaga 134184

                                                                          
Query: 76     agaatggcataggcacagatgcatcaattcctgtccatataaacaacatttcggagcgta 135
              ||||||||||||| |||||||||||||||||||| ||| |||||||||| |  |||||||
Sbjct: 134185 agaatggcataggtacagatgcatcaattcctgtgcatgtaaacaacatctgcgagcgta 134244

                           
Query: 136    attatgtccaggt 148
              ||||||| |||||
Sbjct: 134245 attatgttcaggt 134257



 Score =  141 bits (71), Expect = 2e-30
 Identities = 101/111 (90%)
 Strand = Plus / Plus

                                                                          
Query: 358    agattgaaaacatggatactttgttcgaagcacagttttcacctctggcagactctgggc 417
              ||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||| |
Sbjct: 135296 agattgaaaacatggatgctttgttcgaagcacagttttcacctttggctgactctggac 135355

                                                                 
Query: 418    gtctattgagcaagtgtggaaaatgtggtcgatatatgaaatatatttcca 468
              || || ||||||||||||||||||||| ||| |||||||| || |||||||
Sbjct: 135356 gtttactgagcaagtgtggaaaatgtgctcggtatatgaagtacatttcca 135406
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>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBb0004A05, complete sequence
          Length = 157913

 Score =  214 bits (108), Expect = 2e-52
 Identities = 177/200 (88%)
 Strand = Plus / Plus

                                                                         
Query: 156   ggaagaagattagtaccaacagccctgggaactaccctgataagaggatatcagtgtatt 215
             ||||||||||||||||||||| |||||||||||||  |||||||||| |||||||| |||
Sbjct: 19067 ggaagaagattagtaccaacacccctgggaactacattgataagagggtatcagtgcatt 19126

                                                                         
Query: 216   gatgccgatctctgcctgccagatatccgaagctttattgagcaacagattactctaatt 275
             ||||| ||||| ||| | |||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 19127 gatgctgatctgtgcttaccagatatccgaaggtttattgagcagcagattactctaatt 19186

                                                                         
Query: 276   gcaaaaggaaaagctgatcatcttcaagtcattcaacatgttcttgaacagtttatgaga 335
             ||||||||  ||||||| |||||||||||  | || ||||||||| | |||||||||| |
Sbjct: 19187 gcaaaaggtgaagctgaccatcttcaagttgtgcagcatgttcttcagcagtttatgaaa 19246

                                 
Query: 336   aagtactcttattttgtgaa 355
             |||||||| || ||||||||
Sbjct: 19247 aagtactcgtactttgtgaa 19266



 Score =  176 bits (89), Expect = 4e-41
 Identities = 122/133 (91%)
 Strand = Plus / Plus

                                                                         
Query: 16    agggaagcaccacggctcctgattaccttagtgagagtgaattgatctctctcatggaga 75
             |||| ||||||||  ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 18799 agggtagcaccacacctcctgactaccttagtgagagtgaattgatctctctcatggaga 18858

                                                                         
Query: 76    agaatggcataggcacagatgcatcaattcctgtccatataaacaacatttcggagcgta 135
             ||||||||||||| |||||||||||||||||||| ||| |||||||||| |  |||||||
Sbjct: 18859 agaatggcataggtacagatgcatcaattcctgtgcatgtaaacaacatctgcgagcgta 18918

                          
Query: 136   attatgtccaggt 148
             ||||||| |||||
Sbjct: 18919 attatgttcaggt 18931



 Score =  141 bits (71), Expect = 2e-30
 Identities = 101/111 (90%)
 Strand = Plus / Plus

                                                                         
Query: 358   agattgaaaacatggatactttgttcgaagcacagttttcacctctggcagactctgggc 417
             ||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||| |
Sbjct: 19970 agattgaaaacatggatgctttgttcgaagcacagttttcacctttggctgactctggac 20029

                                                                
Query: 418   gtctattgagcaagtgtggaaaatgtggtcgatatatgaaatatatttcca 468
             || || ||||||||||||||||||||| ||| |||||||| || |||||||
Sbjct: 20030 gtttactgagcaagtgtggaaaatgtgctcggtatatgaagtacatttcca 20080
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  214 bits (108), Expect = 2e-52
 Identities = 177/200 (88%)
 Strand = Plus / Plus

                                                                            
Query: 156      ggaagaagattagtaccaacagccctgggaactaccctgataagaggatatcagtgtatt 215
                ||||||||||||||||||||| |||||||||||||  |||||||||| |||||||| |||
Sbjct: 19089107 ggaagaagattagtaccaacacccctgggaactacattgataagagggtatcagtgcatt 19089166

                                                                            
Query: 216      gatgccgatctctgcctgccagatatccgaagctttattgagcaacagattactctaatt 275
                ||||| ||||| ||| | |||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 19089167 gatgctgatctgtgcttaccagatatccgaaggtttattgagcagcagattactctaatt 19089226

                                                                            
Query: 276      gcaaaaggaaaagctgatcatcttcaagtcattcaacatgttcttgaacagtttatgaga 335
                ||||||||  ||||||| |||||||||||  | || ||||||||| | |||||||||| |
Sbjct: 19089227 gcaaaaggtgaagctgaccatcttcaagttgtgcagcatgttcttcagcagtttatgaaa 19089286

                                    
Query: 336      aagtactcttattttgtgaa 355
                |||||||| || ||||||||
Sbjct: 19089287 aagtactcgtactttgtgaa 19089306



 Score =  176 bits (89), Expect = 4e-41
 Identities = 122/133 (91%)
 Strand = Plus / Plus

                                                                            
Query: 16       agggaagcaccacggctcctgattaccttagtgagagtgaattgatctctctcatggaga 75
                |||| ||||||||  ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 19088839 agggtagcaccacacctcctgactaccttagtgagagtgaattgatctctctcatggaga 19088898

                                                                            
Query: 76       agaatggcataggcacagatgcatcaattcctgtccatataaacaacatttcggagcgta 135
                ||||||||||||| |||||||||||||||||||| ||| |||||||||| |  |||||||
Sbjct: 19088899 agaatggcataggtacagatgcatcaattcctgtgcatgtaaacaacatctgcgagcgta 19088958

                             
Query: 136      attatgtccaggt 148
                ||||||| |||||
Sbjct: 19088959 attatgttcaggt 19088971



 Score =  141 bits (71), Expect = 2e-30
 Identities = 101/111 (90%)
 Strand = Plus / Plus

                                                                            
Query: 358      agattgaaaacatggatactttgttcgaagcacagttttcacctctggcagactctgggc 417
                ||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||| |
Sbjct: 19090010 agattgaaaacatggatgctttgttcgaagcacagttttcacctttggctgactctggac 19090069

                                                                   
Query: 418      gtctattgagcaagtgtggaaaatgtggtcgatatatgaaatatatttcca 468
                || || ||||||||||||||||||||| ||| |||||||| || |||||||
Sbjct: 19090070 gtttactgagcaagtgtggaaaatgtgctcggtatatgaagtacatttcca 19090120
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>ref|NM_001036386.1| Arabidopsis thaliana DNA binding / DNA topoisomerase/ DNA
            topoisomerase type I AT2G32000 transcript variant
            AT2G32000.2 mRNA, complete cds
          Length = 2734

 Score =  115 bits (58), Expect = 1e-22
 Identities = 97/110 (88%)
 Strand = Plus / Plus

                                                                        
Query: 39   taccttagtgagagtgaattgatctctctcatggagaagaatggcataggcacagatgca 98
            ||||||| |||||||||  |||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 1532 taccttactgagagtgagctgatatctctcatggagaagcatggcataggcacagatgca 1591

                                                              
Query: 99   tcaattcctgtccatataaacaacatttcggagcgtaattatgtccaggt 148
            |||||  |||| |||||||||||||||   || ||||||||||| |||||
Sbjct: 1592 tcaatagctgtacatataaacaacattggtgaacgtaattatgttcaggt 1641



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 83/102 (81%)
 Strand = Plus / Plus

                                                                        
Query: 195  ataagaggatatcagtgtattgatgccgatctctgcctgccagatatccgaagctttatt 254
            |||||||| ||||||||||||||| | || || ||| | ||||| ||||| || ||||| 
Sbjct: 1688 ataagaggctatcagtgtattgatccagacctttgcttaccagacatccggagttttatc 1747

                                                      
Query: 255  gagcaacagattactctaattgcaaaaggaaaagctgatcat 296
            |||||||| || |||||  |||| || ||  |||||||||||
Sbjct: 1748 gagcaacaaatcactcttgttgccaagggccaagctgatcat 1789
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>ref|NM_128760.2| Arabidopsis thaliana DNA binding / DNA topoisomerase/ DNA
            topoisomerase type I/ nucleic acid binding AT2G32000
            transcript variant AT2G32000.1 mRNA, complete cds
          Length = 2707

 Score =  115 bits (58), Expect = 1e-22
 Identities = 97/110 (88%)
 Strand = Plus / Plus

                                                                        
Query: 39   taccttagtgagagtgaattgatctctctcatggagaagaatggcataggcacagatgca 98
            ||||||| |||||||||  |||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 1496 taccttactgagagtgagctgatatctctcatggagaagcatggcataggcacagatgca 1555

                                                              
Query: 99   tcaattcctgtccatataaacaacatttcggagcgtaattatgtccaggt 148
            |||||  |||| |||||||||||||||   || ||||||||||| |||||
Sbjct: 1556 tcaatagctgtacatataaacaacattggtgaacgtaattatgttcaggt 1605



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 83/102 (81%)
 Strand = Plus / Plus

                                                                        
Query: 195  ataagaggatatcagtgtattgatgccgatctctgcctgccagatatccgaagctttatt 254
            |||||||| ||||||||||||||| | || || ||| | ||||| ||||| || ||||| 
Sbjct: 1652 ataagaggctatcagtgtattgatccagacctttgcttaccagacatccggagttttatc 1711

                                                      
Query: 255  gagcaacagattactctaattgcaaaaggaaaagctgatcat 296
            |||||||| || |||||  |||| || ||  |||||||||||
Sbjct: 1712 gagcaacaaatcactcttgttgccaagggccaagctgatcat 1753
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>gb|AC006223.4| Arabidopsis thaliana chromosome 2 clone F22D22 map TEn5, complete
             sequence
          Length = 103194

 Score =  115 bits (58), Expect = 1e-22
 Identities = 97/110 (88%)
 Strand = Plus / Plus

                                                                         
Query: 39    taccttagtgagagtgaattgatctctctcatggagaagaatggcataggcacagatgca 98
             ||||||| |||||||||  |||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 71951 taccttactgagagtgagctgatatctctcatggagaagcatggcataggcacagatgca 72010

                                                               
Query: 99    tcaattcctgtccatataaacaacatttcggagcgtaattatgtccaggt 148
             |||||  |||| |||||||||||||||   || ||||||||||| |||||
Sbjct: 72011 tcaatagctgtacatataaacaacattggtgaacgtaattatgttcaggt 72060



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 83/102 (81%)
 Strand = Plus / Plus

                                                                         
Query: 195   ataagaggatatcagtgtattgatgccgatctctgcctgccagatatccgaagctttatt 254
             |||||||| ||||||||||||||| | || || ||| | ||||| ||||| || ||||| 
Sbjct: 72233 ataagaggctatcagtgtattgatccagacctttgcttaccagacatccggagttttatc 72292

                                                       
Query: 255   gagcaacagattactctaattgcaaaaggaaaagctgatcat 296
             |||||||| || |||||  |||| || ||  |||||||||||
Sbjct: 72293 gagcaacaaatcactcttgttgccaagggccaagctgatcat 72334
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>dbj|AK221174.1| Arabidopsis thaliana mRNA for putative DNA topoisomerase III beta,
            complete cds, clone: RAFL22-97-K19
          Length = 2785

 Score =  115 bits (58), Expect = 1e-22
 Identities = 97/110 (88%)
 Strand = Plus / Plus

                                                                        
Query: 39   taccttagtgagagtgaattgatctctctcatggagaagaatggcataggcacagatgca 98
            ||||||| |||||||||  |||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 1537 taccttactgagagtgagctgatatctctcatggagaagcatggcataggcacagatgca 1596

                                                              
Query: 99   tcaattcctgtccatataaacaacatttcggagcgtaattatgtccaggt 148
            |||||  |||| |||||||||||||||   || ||||||||||| |||||
Sbjct: 1597 tcaatagctgtacatataaacaacattggtgaacgtaattatgttcaggt 1646



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 83/102 (81%)
 Strand = Plus / Plus

                                                                        
Query: 195  ataagaggatatcagtgtattgatgccgatctctgcctgccagatatccgaagctttatt 254
            |||||||| ||||||||||||||| | || || ||| | ||||| ||||| || ||||| 
Sbjct: 1693 ataagaggctatcagtgtattgatccagacctttgcttaccagacatccggagttttatc 1752

                                                      
Query: 255  gagcaacagattactctaattgcaaaaggaaaagctgatcat 296
            |||||||| || |||||  |||| || ||  |||||||||||
Sbjct: 1753 gagcaacaaatcactcttgttgccaagggccaagctgatcat 1794
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>emb|BX821034.1|CNS0A83Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH93ZD03 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2707

 Score =  115 bits (58), Expect = 1e-22
 Identities = 97/110 (88%)
 Strand = Plus / Plus

                                                                        
Query: 39   taccttagtgagagtgaattgatctctctcatggagaagaatggcataggcacagatgca 98
            ||||||| |||||||||  |||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 1496 taccttactgagagtgagctgatatctctcatggagaagcatggcataggcacagatgca 1555

                                                              
Query: 99   tcaattcctgtccatataaacaacatttcggagcgtaattatgtccaggt 148
            |||||  |||| |||||||||||||||   || ||||||||||| |||||
Sbjct: 1556 tcaatagctgtacatataaacaacattggtgaacgtaattatgttcaggt 1605



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 83/102 (81%)
 Strand = Plus / Plus

                                                                        
Query: 195  ataagaggatatcagtgtattgatgccgatctctgcctgccagatatccgaagctttatt 254
            |||||||| ||||||||||||||| | || || ||| | ||||| ||||| || ||||| 
Sbjct: 1652 ataagaggctatcagtgtattgatccagacctttgcttaccagacatccggagttttatc 1711

                                                      
Query: 255  gagcaacagattactctaattgcaaaaggaaaagctgatcat 296
            |||||||| || |||||  |||| || ||  |||||||||||
Sbjct: 1712 gagcaacaaatcactcttgttgccaagggccaagctgatcat 1753
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>dbj|AK175923.1| Arabidopsis thaliana mRNA for putative DNA topoisomerase III beta,
            complete cds, clone: RAFL22-58-I15
          Length = 2744

 Score =  115 bits (58), Expect = 1e-22
 Identities = 97/110 (88%)
 Strand = Plus / Plus

                                                                        
Query: 39   taccttagtgagagtgaattgatctctctcatggagaagaatggcataggcacagatgca 98
            ||||||| |||||||||  |||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 1532 taccttactgagagtgagctgatatctctcatggagaagcatggcataggcacagatgca 1591

                                                              
Query: 99   tcaattcctgtccatataaacaacatttcggagcgtaattatgtccaggt 148
            |||||  |||| |||||||||||||||   || ||||||||||| |||||
Sbjct: 1592 tcaatagctgtacatataaacaacattggtgaacgtaattatgttcaggt 1641



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 83/102 (81%)
 Strand = Plus / Plus

                                                                        
Query: 195  ataagaggatatcagtgtattgatgccgatctctgcctgccagatatccgaagctttatt 254
            |||||||| ||||||||||||||| | || || ||| | ||||| ||||| || ||||| 
Sbjct: 1688 ataagaggctatcagtgtattgatccagacctttgcttaccagacatccggagttttatc 1747

                                                      
Query: 255  gagcaacagattactctaattgcaaaaggaaaagctgatcat 296
            |||||||| || |||||  |||| || ||  |||||||||||
Sbjct: 1748 gagcaacaaatcactcttgttgccaagggccaagctgatcat 1789
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>dbj|AK175789.1| Arabidopsis thaliana mRNA for putative DNA topoisomerase III beta,
            complete cds, clone: RAFL22-37-I21
          Length = 2744

 Score =  115 bits (58), Expect = 1e-22
 Identities = 97/110 (88%)
 Strand = Plus / Plus

                                                                        
Query: 39   taccttagtgagagtgaattgatctctctcatggagaagaatggcataggcacagatgca 98
            ||||||| |||||||||  |||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 1532 taccttactgagagtgagctgatatctctcatggagaagcatggcataggcacagatgca 1591

                                                              
Query: 99   tcaattcctgtccatataaacaacatttcggagcgtaattatgtccaggt 148
            |||||  |||| |||||||||||||||   || ||||||||||| |||||
Sbjct: 1592 tcaatagctgtacatataaacaacattggtgaacgtaattatgttcaggt 1641



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 83/102 (81%)
 Strand = Plus / Plus

                                                                        
Query: 195  ataagaggatatcagtgtattgatgccgatctctgcctgccagatatccgaagctttatt 254
            |||||||| ||||||||||||||| | || || ||| | ||||| ||||| || ||||| 
Sbjct: 1688 ataagaggctatcagtgtattgatccagacctttgcttaccagacatccggagttttatc 1747

                                                      
Query: 255  gagcaacagattactctaattgcaaaaggaaaagctgatcat 296
            |||||||| || |||||  |||| || ||  |||||||||||
Sbjct: 1748 gagcaacaaatcactcttgttgccaagggccaagctgatcat 1789
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>gb|AC147484.21| Medicago truncatula clone mth2-52b4, complete sequence
          Length = 119559

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                         
Query: 58    tgatctctctcatggagaagaatggcataggcacagatgcatcaattcctgtccatataa 117
             |||||||||| |||||||||||||| ||||| |||||||||||||||||||| ||||| |
Sbjct: 18795 tgatctctctaatggagaagaatggaataggaacagatgcatcaattcctgtacatatca 18736

                                             
Query: 118   acaacatttcggagcgtaattatgtccaggta 149
             |||| || |  ||||| |||||||| ||||||
Sbjct: 18735 acaatatatgtgagcggaattatgtgcaggta 18704



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 71/82 (86%)
 Strand = Plus / Minus

                                                                         
Query: 196   taagaggatatcagtgtattgatgccgatctctgcctgccagatatccgaagctttattg 255
             ||||||| ||||| |  |||||| | || ||||||||||| |||||||| ||||||||||
Sbjct: 18581 taagaggttatcaatcaattgatccagacctctgcctgcccgatatccgtagctttattg 18522

                                   
Query: 256   agcaacagattactctaattgc 277
             ||||||| |||||||| |||||
Sbjct: 18521 agcaacaaattactcttattgc 18500
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>ref|XM_515006.1| PREDICTED: Pan troglodytes similar to topoisomerase (DNA) III beta;
           topoisomerase III beta (LOC458682), mRNA
          Length = 3540

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 66  ctcatggagaagaatggcataggcacagatgc 97
           |||||||||||| ||||||| |||||||||||
Sbjct: 139 ctcatggagaagcatggcatcggcacagatgc 170
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>dbj|AB179256.1| Macaca fascicularis testis cDNA clone: QtsA-16130, similar to human
            topoisomerase (DNA) III beta (TOP3B), mRNA, RefSeq:
            NM_003935.3
          Length = 3219

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                            
Query: 66   ctcatggagaagaatggcataggcacagatgc 97
            |||||||||||| ||||||| |||||||||||
Sbjct: 2030 ctcatggagaagcatggcatcggcacagatgc 2061
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>emb|Z78014.1|CEF42E8 Caenorhabditis elegans Cosmid F42E8, complete sequence
          Length = 18327

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 291   gatcatcttcaagtcattcaaca 313
             |||||||||||||||||||||||
Sbjct: 14786 gatcatcttcaagtcattcaaca 14764
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>ref|NM_073863.1| Caenorhabditis elegans F42E8.2 (F42E8.2) mRNA, complete cds
          Length = 369

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 291 gatcatcttcaagtcattcaaca 313
           |||||||||||||||||||||||
Sbjct: 123 gatcatcttcaagtcattcaaca 145
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>ref|XM_658534.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6022.2), mRNA
          Length = 1833

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 221 cgatctctgcctgccagatat 241
           |||||||||||||||||||||
Sbjct: 745 cgatctctgcctgccagatat 725
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>ref|XM_790856.1| PREDICTED: Strongylocentrotus purpuratus similar to topoisomerase
            (DNA) III beta (LOC591288), mRNA
          Length = 2304

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 51   agtgaattgatctctctcatggagaagaatggc 83
            |||||| ||||||| |||||||||||| |||||
Sbjct: 1204 agtgaactgatctccctcatggagaagcatggc 1236
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>gb|AC022311.5| Homo sapiens BAC clone RP11-146M24 from 2, complete sequence
          Length = 154084

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 244    gaagctttattgagcaacaga 264
              |||||||||||||||||||||
Sbjct: 144753 gaagctttattgagcaacaga 144733
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>gb|DQ177331.1| Sus scrofa ADAMTS1 (ADAMTS1) gene, complete cds
          Length = 9026

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 336  aagtactcttattttgtgaagaaga 360
            |||||| ||||||||||||||||||
Sbjct: 7701 aagtacacttattttgtgaagaaga 7725
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>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 248     ctttattgagcaacagatta 267
               ||||||||||||||||||||
Sbjct: 1368604 ctttattgagcaacagatta 1368623
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>ref|XM_477078.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1525

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 gcctgccagatatccgaagc 248
           ||||||||||||||||||||
Sbjct: 795 gcctgccagatatccgaagc 814
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>ref|NM_003935.3| Homo sapiens topoisomerase (DNA) III beta (TOP3B), mRNA
          Length = 3124

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 66   ctcatggagaagaatggcataggcacagatgc 97
            |||||||||||| ||||||| ||||| |||||
Sbjct: 1939 ctcatggagaagcatggcatcggcacggatgc 1970
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>gb|AY176328.1| Kluyveromyces lactis CDP-diacylglycerol-glycerol-3-phosphate
           3-phosphatidyltransferase (PGS1) gene, complete cds
          Length = 3232

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 436 gaaaatgtggtcgatatatgaaat 459
           |||||||||||||||||| |||||
Sbjct: 200 gaaaatgtggtcgatatacgaaat 223
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>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBb0073M15, complete sequence
          Length = 143071

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 341  ctcttattttgtgaagaaga 360
            ||||||||||||||||||||
Sbjct: 7631 ctcttattttgtgaagaaga 7612
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>gb|BC077740.1| Xenopus laevis methyl-CpG binding protein MBD3 long form, mRNA (cDNA
            clone MGC:78880 IMAGE:4173813), complete cds
          Length = 2174

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 363  gaaaacatggatactttgtt 382
            ||||||||||||||||||||
Sbjct: 1370 gaaaacatggatactttgtt 1389
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>ref|XM_451376.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A08536g predicted mRNA
          Length = 900

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 436 gaaaatgtggtcgatatatgaaat 459
           |||||||||||||||||| |||||
Sbjct: 871 gaaaatgtggtcgatatacgaaat 894
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 341      ctcttattttgtgaagaaga 360
                ||||||||||||||||||||
Sbjct: 13602211 ctcttattttgtgaagaaga 13602192
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>emb|BX901895.15| Zebrafish DNA sequence from clone CH211-218C11 in linkage group 7,
              complete sequence
          Length = 208436

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 446    tcgatatatgaaatatattt 465
              ||||||||||||||||||||
Sbjct: 183366 tcgatatatgaaatatattt 183347
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>gb|AC137073.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0005A11, from chromosome 3, complete sequence
          Length = 168219

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 341    ctcttattttgtgaagaaga 360
              ||||||||||||||||||||
Sbjct: 162102 ctcttattttgtgaagaaga 162083
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>emb|AL161444.18| Human DNA sequence from clone RP11-312C2 on chromosome 9, complete
             sequence
          Length = 150563

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   gaagctttattgagcaacag 263
             ||||||||||||||||||||
Sbjct: 20854 gaagctttattgagcaacag 20835
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>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1062590

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 436    gaaaatgtggtcgatatatgaaat 459
              |||||||||||||||||| |||||
Sbjct: 754132 gaaaatgtggtcgatatacgaaat 754155
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>emb|AL591391.5| Zebrafish DNA sequence from clone BUSM1-186F8 in linkage group 7
             Contains the nitr1a_3 gene for novel immune-type receptor
             1a, allele 3, the nitr1c_3 gene for novel immune-type
             receptor 1c, allele 3, the nitr2e_1 gene for novel
             immune-type receptor 2e, allele 1, the nitr1b_2 gene for
             novel immune-ype receptor 1b, allele 2, the nitr2a_3 gene
             for novel immune-type receptor 2a, allele 3, the nitr2b_1
             gene for novel immune-type receptor 2b, allele 1, the
             nitr1f_1 gene for novel immune-type receptor 1f, allele 1,
             a novel immune-type receptor 2c pseudogene, the nitr3d_3
             gene for novel immune-type receptor 3d, allele 3, the
             nitr1h_1 gene for novel immune-type receptor 1h, allele 1,
             the nitr1d_5 gene for novel immune-type receptor 1d,
             allele 5 and two novel immune-type receptor 1 pseudogenes,
             complete sequence
          Length = 97640

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 446   tcgatatatgaaatatattt 465
             ||||||||||||||||||||
Sbjct: 30379 tcgatatatgaaatatattt 30360
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>emb|AJ639658.1| Dugesia japonica pum gene for Pumilio homolog
          Length = 3027

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 306  attcaacatgttcttgaaca 325
            ||||||||||||||||||||
Sbjct: 2335 attcaacatgttcttgaaca 2354
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>gb|BC002432.2| Homo sapiens topoisomerase (DNA) III beta, mRNA (cDNA clone MGC:1867
            IMAGE:3346377), complete cds
          Length = 3124

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 66   ctcatggagaagaatggcataggcacagatgc 97
            |||||||||||| ||||||| ||||| |||||
Sbjct: 1939 ctcatggagaagcatggcatcggcacggatgc 1970
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>emb|CR625879.1| full-length cDNA clone CL0BB013ZD11 of Neuroblastoma of Homo
           sapiens (human)
          Length = 2956

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 66  ctcatggagaagaatggcataggcacagatgc 97
           |||||||||||| ||||||| ||||| |||||
Sbjct: 888 ctcatggagaagcatggcatcggcacggatgc 919
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>dbj|AK096695.1| Homo sapiens cDNA FLJ39376 fis, clone PERIC1000025, highly similar
           to DNA TOPOISOMERASE III BETA-1 (EC 5.99.1.2)
          Length = 2889

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 66  ctcatggagaagaatggcataggcacagatgc 97
           |||||||||||| ||||||| ||||| |||||
Sbjct: 827 ctcatggagaagcatggcatcggcacggatgc 858
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>emb|CR597544.1| full-length cDNA clone CS0DC004YD04 of Neuroblastoma Cot
            25-normalized of Homo sapiens (human)
          Length = 2826

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 66   ctcatggagaagaatggcataggcacagatgc 97
            |||||||||||| ||||||| ||||| |||||
Sbjct: 1689 ctcatggagaagcatggcatcggcacggatgc 1720
to top
>ref|XM_624959.1| PREDICTED: Apis mellifera similar to topoisomerase III beta
           (LOC552584), partial mRNA
          Length = 1538

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 432 tgtggaaaatgtggtcgatatatgaaatatat 463
           |||||||||||| | || ||||||||||||||
Sbjct: 739 tgtggaaaatgtcgacgctatatgaaatatat 770
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>ref|XM_625162.1| PREDICTED: Apis mellifera similar to MGC53016 protein (LOC552787),
            mRNA
          Length = 2921

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 432  tgtggaaaatgtggtcgatatatgaaatatat 463
            |||||||||||| | || ||||||||||||||
Sbjct: 2122 tgtggaaaatgtcgacgctatatgaaatatat 2153
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 229     gcctgccagatatccgaagc 248
               ||||||||||||||||||||
Sbjct: 5784951 gcctgccagatatccgaagc 5784932
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 341      ctcttattttgtgaagaaga 360
                ||||||||||||||||||||
Sbjct: 13598086 ctcttattttgtgaagaaga 13598067
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>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1119_B04
          Length = 151721

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   gcctgccagatatccgaagc 248
             ||||||||||||||||||||
Sbjct: 91979 gcctgccagatatccgaagc 91960
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>gb|AC145087.14| Mus musculus chromosome 1, clone RP23-255P18, complete sequence
          Length = 187470

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 270   ctaattgcaaaaggaaaagctgat 293
             ||||||||||||||||| ||||||
Sbjct: 48871 ctaattgcaaaaggaaatgctgat 48894
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>dbj|AK100653.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111D19, full
            insert sequence
          Length = 2883

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 229  gcctgccagatatccgaagc 248
            ||||||||||||||||||||
Sbjct: 2252 gcctgccagatatccgaagc 2271
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>dbj|AK099034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135I03, full
           insert sequence
          Length = 995

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 341 ctcttattttgtgaagaaga 360
           ||||||||||||||||||||
Sbjct: 813 ctcttattttgtgaagaaga 832
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>dbj|AK072893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149L23, full
           insert sequence
          Length = 1526

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 gcctgccagatatccgaagc 248
           ||||||||||||||||||||
Sbjct: 796 gcctgccagatatccgaagc 815
to top
>dbj|AK061469.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D06, full
           insert sequence
          Length = 999

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 341 ctcttattttgtgaagaaga 360
           ||||||||||||||||||||
Sbjct: 817 ctcttattttgtgaagaaga 836
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>emb|BX005479.5| Zebrafish DNA sequence from clone DKEY-209E8 in linkage group 3,
             complete sequence
          Length = 171793

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 449   atatatgaaatatatttcca 468
             ||||||||||||||||||||
Sbjct: 28838 atatatgaaatatatttcca 28819
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>emb|CR456596.1| Homo sapiens TOP3B full length open reading frame (ORF) cDNA clone
            (cDNA clone C22ORF:pGEM.TOP3B.V4)
          Length = 2675

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 66   ctcatggagaagaatggcataggcacagatgc 97
            |||||||||||| ||||||| ||||| |||||
Sbjct: 1531 ctcatggagaagcatggcatcggcacggatgc 1562
to top
>gb|AF125216.1|AF125216 Homo sapiens DNA topoisomerase III beta (TOP3B) mRNA, complete cds
          Length = 2680

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 66   ctcatggagaagaatggcataggcacagatgc 97
            |||||||||||| ||||||| ||||| |||||
Sbjct: 1577 ctcatggagaagcatggcatcggcacggatgc 1608
to top
>gb|AF053082.1|AF053082 Homo sapiens DNA topoisomerase III beta (TOP3 beta) mRNA, complete
            cds
          Length = 2793

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 66   ctcatggagaagaatggcataggcacagatgc 97
            |||||||||||| ||||||| ||||| |||||
Sbjct: 1617 ctcatggagaagcatggcatcggcacggatgc 1648
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>gb|AF017146.1|AF017146 Homo sapiens DNA topoisomerase III beta (TOP3b) mRNA, complete cds
          Length = 2784

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 66   ctcatggagaagaatggcataggcacagatgc 97
            |||||||||||| ||||||| ||||| |||||
Sbjct: 1617 ctcatggagaagcatggcatcggcacggatgc 1648
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>gb|AC006071.1|AC006071 Homo sapiens chromosome 17, clone hCIT.124_H_2, complete sequence
          Length = 93713

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 246   agctttattgagcaacagattact 269
             ||||||||||||||||||| ||||
Sbjct: 33980 agctttattgagcaacagaatact 33957
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>emb|BX005347.5| Zebrafish DNA sequence from clone DKEY-199K9 in linkage group 17,
              complete sequence
          Length = 165991

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 293    tcatcttcaagtcattcaacatgt 316
              ||||||||||||||||||| ||||
Sbjct: 130148 tcatcttcaagtcattcaaaatgt 130125
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>gb|AF042332.1|AF042332 Oryza sativa subsp. japonica cycloartenol-C24-methyltransferase
           mRNA, complete cds
          Length = 1629

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 gcctgccagatatccgaagc 248
           ||||||||||||||||||||
Sbjct: 869 gcctgccagatatccgaagc 888
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>emb|AL833505.1|HSM804818 Homo sapiens mRNA; cDNA DKFZp686C2037 (from clone DKFZp686C2037)
          Length = 4182

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 66   ctcatggagaagaatggcataggcacagatgc 97
            |||||||||||| ||||||| ||||| |||||
Sbjct: 1746 ctcatggagaagcatggcatcggcacggatgc 1777
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>emb|AL591418.11| Zebrafish DNA sequence from clone BUSM1-139E19 in linkage group 7,
             complete sequence
          Length = 112025

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 446   tcgatatatgaaatatattt 465
             ||||||||||||||||||||
Sbjct: 34131 tcgatatatgaaatatattt 34112
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>gb|AC171726.1| Lycopersicon esculentum chromosome 01 clone C01HBa0088L02, complete
              sequence
          Length = 120525

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 302    agtcattcaacatgttcttgaaca 325
              ||||||||||||| ||||||||||
Sbjct: 102286 agtcattcaacattttcttgaaca 102263


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,850,469
Number of Sequences: 3902068
Number of extensions: 4850469
Number of successful extensions: 95792
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95572
Number of HSP's gapped (non-prelim): 220
length of query: 468
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 446
effective length of database: 17,147,199,772
effective search space: 7647651098312
effective search space used: 7647651098312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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