ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast47d02 |
|---|---|
| Clone Library Name | barley_pub |
>PIC2_YEAST (P40035) Mitochondrial phosphate carrier protein 2 (Phosphate| transport protein 2) (PTP 2) (mPic 2) (Pi carrier isoform 2) Length = 300 Score = 52.4 bits (124), Expect = 3e-07 Identities = 22/35 (62%), Positives = 27/35 (77%) Frame = +2 Query: 290 KIVMYSPAFYAACTAGGIASCGLTHMAVTPLDLVK 394 KI +Y+ FYA CT GGI +CG TH ++TPLDLVK Sbjct: 9 KIQLYTKEFYATCTLGGIIACGPTHSSITPLDLVK 43
>MPCP_CAEEL (P40614) Phosphate carrier protein, mitochondrial precursor (PTP)| Length = 340 Score = 45.8 bits (107), Expect = 2e-05 Identities = 20/42 (47%), Positives = 28/42 (66%) Frame = +2 Query: 269 SIRAPNEKIVMYSPAFYAACTAGGIASCGLTHMAVTPLDLVK 394 ++ AP + + S +YA C GG+ SCG+TH A+ PLDLVK Sbjct: 28 AVSAPGQ-VEFGSGKYYAYCALGGVLSCGITHTAIVPLDLVK 68
>MPCP_RAT (P16036) Phosphate carrier protein, mitochondrial precursor (PTP)| (Solute carrier family 25 member 3) Length = 356 Score = 45.4 bits (106), Expect = 3e-05 Identities = 20/30 (66%), Positives = 22/30 (73%) Frame = +2 Query: 305 SPAFYAACTAGGIASCGLTHMAVTPLDLVK 394 S +YA C GG+ SCGLTH AV PLDLVK Sbjct: 55 SMKYYALCGFGGVLSCGLTHTAVVPLDLVK 84
>MPCP_MOUSE (Q8VEM8) Phosphate carrier protein, mitochondrial precursor (PTP)| (Solute carrier family 25 member 3) Length = 357 Score = 45.4 bits (106), Expect = 3e-05 Identities = 20/30 (66%), Positives = 22/30 (73%) Frame = +2 Query: 305 SPAFYAACTAGGIASCGLTHMAVTPLDLVK 394 S +YA C GG+ SCGLTH AV PLDLVK Sbjct: 56 SMKYYALCGFGGVLSCGLTHTAVVPLDLVK 85
>MPCP_CHOFU (O61703) Phosphate carrier protein, mitochondrial precursor| (Phosphate transport protein) (PTP) Length = 349 Score = 44.3 bits (103), Expect = 7e-05 Identities = 19/30 (63%), Positives = 22/30 (73%) Frame = +2 Query: 305 SPAFYAACTAGGIASCGLTHMAVTPLDLVK 394 S ++A C GGI SCG+TH AV PLDLVK Sbjct: 45 STKYFALCGLGGILSCGITHTAVVPLDLVK 74
>MPCP_HUMAN (Q00325) Phosphate carrier protein, mitochondrial precursor (PTP)| (Solute carrier family 25 member 3) Length = 362 Score = 40.8 bits (94), Expect = 8e-04 Identities = 18/30 (60%), Positives = 20/30 (66%) Frame = +2 Query: 305 SPAFYAACTAGGIASCGLTHMAVTPLDLVK 394 S F+ C GGI SCG TH A+ PLDLVK Sbjct: 61 SGRFFILCGLGGIISCGTTHTALVPLDLVK 90
>MPCP_BOVIN (P12234) Phosphate carrier protein, mitochondrial precursor (PTP)| (Solute carrier family 25 member 3) Length = 362 Score = 40.8 bits (94), Expect = 8e-04 Identities = 18/30 (60%), Positives = 20/30 (66%) Frame = +2 Query: 305 SPAFYAACTAGGIASCGLTHMAVTPLDLVK 394 S F+ C GGI SCG TH A+ PLDLVK Sbjct: 61 SGRFFILCGLGGIISCGTTHTALVPLDLVK 90
>MPCP_YEAST (P23641) Mitochondrial phosphate carrier protein (Phosphate| transport protein) (PTP) (mPic 1) (Mitochondrial import receptor) (p32) Length = 311 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +2 Query: 293 IVMYSPAFYAACTAGGIASCGLTHMAVTPLDLVK 394 I YS + Y G CG TH ++ P+D+VK Sbjct: 9 IPQYSVSDYMKFALAGAIGCGSTHSSMVPIDVVK 42
>GHC2_MOUSE (Q9DB41) Mitochondrial glutamate carrier 2 (GC-2) (Glutamate/H(+)| symporter 2) (Solute carrier family 25 member 18) (Fragment) Length = 312 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/31 (45%), Positives = 22/31 (70%) Frame = +2 Query: 302 YSPAFYAACTAGGIASCGLTHMAVTPLDLVK 394 ++ +F A CTAG +A+ +AVTPLD++K Sbjct: 218 FTHSFVAGCTAGSVAA-----VAVTPLDVLK 243
>RISB_SALTY (P66038) 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) (DMRL| synthase) (Lumazine synthase) (Riboflavin synthase beta chain) Length = 156 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = -2 Query: 387 RSSGVTAMWVRPQLAIPPAVQAA*KAGEYMTIFSLGARIEKG 262 + +T +WV +P A +A K+G+Y + +LG I G Sbjct: 45 KDDNITVVWVPGAYELPLATEALAKSGKYDAVVALGTVIRGG 86
>RISB_SALTI (P66039) 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) (DMRL| synthase) (Lumazine synthase) (Riboflavin synthase beta chain) Length = 156 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = -2 Query: 387 RSSGVTAMWVRPQLAIPPAVQAA*KAGEYMTIFSLGARIEKG 262 + +T +WV +P A +A K+G+Y + +LG I G Sbjct: 45 KDDNITVVWVPGAYELPLATEALAKSGKYDAVVALGTVIRGG 86
>RISB_SHIFL (P61718) 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) (DMRL| synthase) (Lumazine synthase) (Riboflavin synthase beta chain) Length = 156 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = -2 Query: 387 RSSGVTAMWVRPQLAIPPAVQAA*KAGEYMTIFSLGARIEKG 262 + +T +WV +P A A K G+Y + +LG I G Sbjct: 45 KDENITVVWVPGAYELPLAAGALAKTGKYDAVIALGTVIRGG 86
>RISB_ECOLI (P61714) 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) (DMRL| synthase) (Lumazine synthase) (Riboflavin synthase beta chain) Length = 156 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = -2 Query: 387 RSSGVTAMWVRPQLAIPPAVQAA*KAGEYMTIFSLGARIEKG 262 + +T +WV +P A A K G+Y + +LG I G Sbjct: 45 KDENITVVWVPGAYELPLAAGALAKTGKYDAVIALGTVIRGG 86
>RISB_ECOL6 (P61715) 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) (DMRL| synthase) (Lumazine synthase) (Riboflavin synthase beta chain) Length = 156 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = -2 Query: 387 RSSGVTAMWVRPQLAIPPAVQAA*KAGEYMTIFSLGARIEKG 262 + +T +WV +P A A K G+Y + +LG I G Sbjct: 45 KDENITVVWVPGAYELPLAAGALAKTGKYDAVIALGTVIRGG 86
>RISB_ECO57 (P61717) 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) (DMRL| synthase) (Lumazine synthase) (Riboflavin synthase beta chain) Length = 156 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = -2 Query: 387 RSSGVTAMWVRPQLAIPPAVQAA*KAGEYMTIFSLGARIEKG 262 + +T +WV +P A A K G+Y + +LG I G Sbjct: 45 KDENITVVWVPGAYELPLAAGALAKTGKYDAVIALGTVIRGG 86
>GHC2_HUMAN (Q9H1K4) Mitochondrial glutamate carrier 2 (GC-2) (Glutamate/H(+)| symporter 2) (Solute carrier family 25 member 18) Length = 315 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/31 (41%), Positives = 21/31 (67%) Frame = +2 Query: 302 YSPAFYAACTAGGIASCGLTHMAVTPLDLVK 394 ++ +F + C AG IA+ +AVTPLD++K Sbjct: 221 FAHSFVSGCVAGSIAA-----VAVTPLDVLK 246 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.308 0.130 0.360 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,077,180 Number of Sequences: 219361 Number of extensions: 224598 Number of successful extensions: 419 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 409 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 417 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits)
