ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast47d02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 151 bits (76), Expect = 2e-33 Identities = 106/116 (91%) Strand = Plus / Plus Query: 278 gcgcccaacgagaaaatcgtcatgtactcgccggccttctacgccgcctgcaccgccggg 337 ||||||| ||||| |||| |||||||||||||| ||||||||||||||||| |||||| Sbjct: 5649343 gcgcccagggagaagatcgagatgtactcgccggcgttctacgccgcctgcacggccggg 5649402 Query: 338 gggatcgccagctgcggcctcacccacatggccgtcaccccgctcgacctggtcaa 393 || ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 5649403 ggcatcgccagctgcggcctcacccacatggcggtcaccccgctcgacctcgtcaa 5649458 Score = 69.9 bits (35), Expect = 6e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 81 cggcggcgatggcgctctccgacctctcccgcgactcgctcct 123 |||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 5649173 cggcggcgatggcgctctccgaccgctcccgcgagtcgctcct 5649215
>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021C04 Length = 162115 Score = 151 bits (76), Expect = 2e-33 Identities = 106/116 (91%) Strand = Plus / Plus Query: 278 gcgcccaacgagaaaatcgtcatgtactcgccggccttctacgccgcctgcaccgccggg 337 ||||||| ||||| |||| |||||||||||||| ||||||||||||||||| |||||| Sbjct: 41490 gcgcccagggagaagatcgagatgtactcgccggcgttctacgccgcctgcacggccggg 41549 Query: 338 gggatcgccagctgcggcctcacccacatggccgtcaccccgctcgacctggtcaa 393 || ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 41550 ggcatcgccagctgcggcctcacccacatggcggtcaccccgctcgacctcgtcaa 41605 Score = 69.9 bits (35), Expect = 6e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 81 cggcggcgatggcgctctccgacctctcccgcgactcgctcct 123 |||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 41320 cggcggcgatggcgctctccgaccgctcccgcgagtcgctcct 41362
>dbj|AK066979.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090N24, full insert sequence Length = 1410 Score = 151 bits (76), Expect = 2e-33 Identities = 106/116 (91%) Strand = Plus / Plus Query: 278 gcgcccaacgagaaaatcgtcatgtactcgccggccttctacgccgcctgcaccgccggg 337 ||||||| ||||| |||| |||||||||||||| ||||||||||||||||| |||||| Sbjct: 249 gcgcccagggagaagatcgagatgtactcgccggcgttctacgccgcctgcacggccggg 308 Query: 338 gggatcgccagctgcggcctcacccacatggccgtcaccccgctcgacctggtcaa 393 || ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 309 ggcatcgccagctgcggcctcacccacatggcggtcaccccgctcgacctcgtcaa 364 Score = 69.9 bits (35), Expect = 6e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 81 cggcggcgatggcgctctccgacctctcccgcgactcgctcct 123 |||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 79 cggcggcgatggcgctctccgaccgctcccgcgagtcgctcct 121
>ref|XM_467970.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1612 Score = 143 bits (72), Expect = 5e-31 Identities = 117/132 (88%) Strand = Plus / Plus Query: 262 gcccttctcgatccgcgcgcccaacgagaaaatcgtcatgtactcgccggccttctacgc 321 |||| ||||||||| || |||| ||||| |||| |||||||||||||| |||||||| Sbjct: 326 gcccatctcgatccaggctcccagggagaagatcgagatgtactcgccggcgttctacgc 385 Query: 322 cgcctgcaccgccggggggatcgccagctgcggcctcacccacatggccgtcaccccgct 381 ||||||||| ||||| ||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 386 cgcctgcactgccggtgggatcgccagctgcgggctcacccacatggccgtcacgccgct 445 Query: 382 cgacctggtcaa 393 |||||| ||||| Sbjct: 446 cgacctcgtcaa 457 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 86 gcgatggcgctctccgacctctcccgcgactcgctcctccc 126 ||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 174 gcgatggcgctctccgaccgctcccgcgagtcgctcctccc 214
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 143 bits (72), Expect = 5e-31 Identities = 117/132 (88%) Strand = Plus / Minus Query: 262 gcccttctcgatccgcgcgcccaacgagaaaatcgtcatgtactcgccggccttctacgc 321 |||| ||||||||| || |||| ||||| |||| |||||||||||||| |||||||| Sbjct: 32341501 gcccatctcgatccaggctcccagggagaagatcgagatgtactcgccggcgttctacgc 32341442 Query: 322 cgcctgcaccgccggggggatcgccagctgcggcctcacccacatggccgtcaccccgct 381 ||||||||| ||||| ||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 32341441 cgcctgcactgccggtgggatcgccagctgcgggctcacccacatggccgtcacgccgct 32341382 Query: 382 cgacctggtcaa 393 |||||| ||||| Sbjct: 32341381 cgacctcgtcaa 32341370 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 86 gcgatggcgctctccgacctctcccgcgactcgctcctccc 126 ||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 32341653 gcgatggcgctctccgaccgctcccgcgagtcgctcctccc 32341613
>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A11 Length = 132352 Score = 143 bits (72), Expect = 5e-31 Identities = 117/132 (88%) Strand = Plus / Minus Query: 262 gcccttctcgatccgcgcgcccaacgagaaaatcgtcatgtactcgccggccttctacgc 321 |||| ||||||||| || |||| ||||| |||| |||||||||||||| |||||||| Sbjct: 117333 gcccatctcgatccaggctcccagggagaagatcgagatgtactcgccggcgttctacgc 117274 Query: 322 cgcctgcaccgccggggggatcgccagctgcggcctcacccacatggccgtcaccccgct 381 ||||||||| ||||| ||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 117273 cgcctgcactgccggtgggatcgccagctgcgggctcacccacatggccgtcacgccgct 117214 Query: 382 cgacctggtcaa 393 |||||| ||||| Sbjct: 117213 cgacctcgtcaa 117202 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 86 gcgatggcgctctccgacctctcccgcgactcgctcctccc 126 ||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 117485 gcgatggcgctctccgaccgctcccgcgagtcgctcctccc 117445
>dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1767_D02 Length = 139145 Score = 143 bits (72), Expect = 5e-31 Identities = 117/132 (88%) Strand = Plus / Minus Query: 262 gcccttctcgatccgcgcgcccaacgagaaaatcgtcatgtactcgccggccttctacgc 321 |||| ||||||||| || |||| ||||| |||| |||||||||||||| |||||||| Sbjct: 3014 gcccatctcgatccaggctcccagggagaagatcgagatgtactcgccggcgttctacgc 2955 Query: 322 cgcctgcaccgccggggggatcgccagctgcggcctcacccacatggccgtcaccccgct 381 ||||||||| ||||| ||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 2954 cgcctgcactgccggtgggatcgccagctgcgggctcacccacatggccgtcacgccgct 2895 Query: 382 cgacctggtcaa 393 |||||| ||||| Sbjct: 2894 cgacctcgtcaa 2883 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 86 gcgatggcgctctccgacctctcccgcgactcgctcctccc 126 ||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 3166 gcgatggcgctctccgaccgctcccgcgagtcgctcctccc 3126
>dbj|AK069611.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022H13, full insert sequence Length = 1612 Score = 143 bits (72), Expect = 5e-31 Identities = 117/132 (88%) Strand = Plus / Plus Query: 262 gcccttctcgatccgcgcgcccaacgagaaaatcgtcatgtactcgccggccttctacgc 321 |||| ||||||||| || |||| ||||| |||| |||||||||||||| |||||||| Sbjct: 326 gcccatctcgatccaggctcccagggagaagatcgagatgtactcgccggcgttctacgc 385 Query: 322 cgcctgcaccgccggggggatcgccagctgcggcctcacccacatggccgtcaccccgct 381 ||||||||| ||||| ||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 386 cgcctgcactgccggtgggatcgccagctgcgggctcacccacatggccgtcacgccgct 445 Query: 382 cgacctggtcaa 393 |||||| ||||| Sbjct: 446 cgacctcgtcaa 457 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 86 gcgatggcgctctccgacctctcccgcgactcgctcctccc 126 ||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 174 gcgatggcgctctccgaccgctcccgcgagtcgctcctccc 214
>gb|AY104226.1| Zea mays PCO060710 mRNA sequence Length = 1639 Score = 143 bits (72), Expect = 5e-31 Identities = 114/128 (89%) Strand = Plus / Plus Query: 266 ttctcgatccgcgcgcccaacgagaaaatcgtcatgtactcgccggccttctacgccgcc 325 |||||||||| |||||||| ||||| |||| |||||||||||||||||||| |||||| Sbjct: 291 ttctcgatccaggcgcccaaggagaagatcgagatgtactcgccggccttctatgccgcc 350 Query: 326 tgcaccgccggggggatcgccagctgcggcctcacccacatggccgtcaccccgctcgac 385 ||||| ||||| || |||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 351 tgcactgccggaggaatcgccagctgcgggctcacccacatggccgtcacgcctctcgac 410 Query: 386 ctggtcaa 393 || ||||| Sbjct: 411 ctcgtcaa 418 Score = 67.9 bits (34), Expect = 2e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 85 ggcgatggcgctctccgacctctcccgcgactcgctcctccc 126 |||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 137 ggcgatggcgctctccgaccgctcccgcgagtcgctcctccc 178
>dbj|AB016064.1| Zea mays mRNA for mitochondrial phosphate transporter, complete cds Length = 1444 Score = 143 bits (72), Expect = 5e-31 Identities = 114/128 (89%) Strand = Plus / Plus Query: 266 ttctcgatccgcgcgcccaacgagaaaatcgtcatgtactcgccggccttctacgccgcc 325 |||||||||| |||||||| ||||| |||| |||||||||||||||||||| |||||| Sbjct: 199 ttctcgatccaggcgcccaaggagaagatcgagatgtactcgccggccttctatgccgcc 258 Query: 326 tgcaccgccggggggatcgccagctgcggcctcacccacatggccgtcaccccgctcgac 385 ||||| ||||| || |||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 259 tgcactgccggaggaatcgccagctgcgggctcacccacatggccgtcacgcctctcgac 318 Query: 386 ctggtcaa 393 || ||||| Sbjct: 319 ctcgtcaa 326 Score = 67.9 bits (34), Expect = 2e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 85 ggcgatggcgctctccgacctctcccgcgactcgctcctccc 126 |||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 45 ggcgatggcgctctccgaccgctcccgcgagtcgctcctccc 86
>dbj|AB016065.1| Oryza sativa (japonica cultivar-group) mRNA for mitochondrial phosphate transporter, complete cds Length = 1552 Score = 135 bits (68), Expect = 1e-28 Identities = 116/132 (87%) Strand = Plus / Plus Query: 262 gcccttctcgatccgcgcgcccaacgagaaaatcgtcatgtactcgccggccttctacgc 321 |||| ||||||||| || |||| ||||| |||| |||||||||||||| || ||||| Sbjct: 291 gcccatctcgatccaggctcccagggagaagatcgagatgtactcgccggcgttttacgc 350 Query: 322 cgcctgcaccgccggggggatcgccagctgcggcctcacccacatggccgtcaccccgct 381 ||||||||| ||||| ||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 351 cgcctgcactgccggtgggatcgccagctgcgggctcacccacatggccgtcacgccgct 410 Query: 382 cgacctggtcaa 393 |||||| ||||| Sbjct: 411 cgacctcgtcaa 422 Score = 65.9 bits (33), Expect = 9e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 86 gcgatggcgctctccgacctctcccgcgactcgctcctccc 126 ||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 139 gcgatggcgctctccgaccgctcccgcgagtcgctcctccc 179
>ref|XM_462662.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1083 Score = 109 bits (55), Expect = 7e-21 Identities = 85/95 (89%) Strand = Plus / Plus Query: 299 atgtactcgccggccttctacgccgcctgcaccgccggggggatcgccagctgcggcctc 358 |||||||||||||||||||||||||| ||||| ||||| || |||||||||||||| ||| Sbjct: 190 atgtactcgccggccttctacgccgcgtgcacggccggcggcatcgccagctgcgggctc 249 Query: 359 acccacatggccgtcaccccgctcgacctggtcaa 393 || |||||| ||||||| |||||||| || ||||| Sbjct: 250 acgcacatgaccgtcacgccgctcgatctcgtcaa 284
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 109 bits (55), Expect = 7e-21 Identities = 85/95 (89%) Strand = Plus / Plus Query: 299 atgtactcgccggccttctacgccgcctgcaccgccggggggatcgccagctgcggcctc 358 |||||||||||||||||||||||||| ||||| ||||| || |||||||||||||| ||| Sbjct: 22337278 atgtactcgccggccttctacgccgcgtgcacggccggcggcatcgccagctgcgggctc 22337337 Query: 359 acccacatggccgtcaccccgctcgacctggtcaa 393 || |||||| ||||||| |||||||| || ||||| Sbjct: 22337338 acgcacatgaccgtcacgccgctcgatctcgtcaa 22337372 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ggcccggcggcgatggcgctc 97 ||||||||||||||||||||| Sbjct: 23498208 ggcccggcggcgatggcgctc 23498188
>dbj|AK105021.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-E02, full insert sequence Length = 1772 Score = 109 bits (55), Expect = 7e-21 Identities = 85/95 (89%) Strand = Plus / Plus Query: 299 atgtactcgccggccttctacgccgcctgcaccgccggggggatcgccagctgcggcctc 358 |||||||||||||||||||||||||| ||||| ||||| || |||||||||||||| ||| Sbjct: 388 atgtactcgccggccttctacgccgcgtgcacggccggcggcatcgccagctgcgggctc 447 Query: 359 acccacatggccgtcaccccgctcgacctggtcaa 393 || |||||| ||||||| |||||||| || ||||| Sbjct: 448 acgcacatgaccgtcacgccgctcgatctcgtcaa 482
>dbj|AK069397.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012A09, full insert sequence Length = 1703 Score = 109 bits (55), Expect = 7e-21 Identities = 85/95 (89%) Strand = Plus / Plus Query: 299 atgtactcgccggccttctacgccgcctgcaccgccggggggatcgccagctgcggcctc 358 |||||||||||||||||||||||||| ||||| ||||| || |||||||||||||| ||| Sbjct: 251 atgtactcgccggccttctacgccgcgtgcacggccggcggcatcgccagctgcgggctc 310 Query: 359 acccacatggccgtcaccccgctcgacctggtcaa 393 || |||||| ||||||| |||||||| || ||||| Sbjct: 311 acgcacatgaccgtcacgccgctcgatctcgtcaa 345
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 109 bits (55), Expect = 7e-21 Identities = 85/95 (89%) Strand = Plus / Plus Query: 299 atgtactcgccggccttctacgccgcctgcaccgccggggggatcgccagctgcggcctc 358 |||||||||||||||||||||||||| ||||| ||||| || |||||||||||||| ||| Sbjct: 88182 atgtactcgccggccttctacgccgcgtgcacggccggcggcatcgccagctgcgggctc 88241 Query: 359 acccacatggccgtcaccccgctcgacctggtcaa 393 || |||||| ||||||| |||||||| || ||||| Sbjct: 88242 acgcacatgaccgtcacgccgctcgatctcgtcaa 88276
>gb|AF452453.1|AF452453 Glycine max phosphate transporter mRNA, complete cds; nuclear gene for mitochondrial product Length = 1470 Score = 93.7 bits (47), Expect = 4e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 299 atgtactcgccggccttctacgccgcctgcaccgccggggggatcgccagctgcggcctc 358 |||||||| || |||||||||||||||||||||||||| || ||| |||||| |||||| Sbjct: 175 atgtactcccctgccttctacgccgcctgcaccgccggtggaatcctcagctgtggcctc 234 Query: 359 acccacatggccgtcaccccgctcgacctggtcaa 393 || |||||||||||||| || || ||||| ||||| Sbjct: 235 actcacatggccgtcactcctcttgacctagtcaa 269
>dbj|AB016063.1| Glycine max mRNA for mitochondrial phosphate transporter, complete cds Length = 1640 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 300 tgtactcgccggccttctacgccgcctgcaccgccggggggatcgccagctgcggcctca 359 ||||||| || |||||||||||||||||||||||||| || ||| |||||| ||||||| Sbjct: 363 tgtactcccccgccttctacgccgcctgcaccgccggtggaatcctcagctgtggcctca 422 Query: 360 cccacatggccgtcaccccgctcgacctggtcaa 393 | |||||| ||||||| || || ||||| ||||| Sbjct: 423 ctcacatgaccgtcactcctcttgacctagtcaa 456
>dbj|AB077283.1| Lotus japonicus LjMPT mRNA for mitochondrial phosphate transporter, complete cds Length = 1621 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 299 atgtactcgccggccttctacgccgcctgcaccgccggggggatcgccagctgcggcctc 358 |||||||| || || ||||||||||||||||||| ||| || ||| ||| || || ||| Sbjct: 296 atgtactcccctgctttctacgccgcctgcaccgtcggcggtatcctcagttgtggactc 355 Query: 359 acccacatggccgtcaccccgctcgacctggtcaa 393 || |||||| ||||||| || || ||||| ||||| Sbjct: 356 actcacatgaccgtcactcctcttgaccttgtcaa 390
>ref|NM_187525.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1137 Score = 44.1 bits (22), Expect = 0.34 Identities = 37/42 (88%) Strand = Plus / Plus Query: 352 cggcctcacccacatggccgtcaccccgctcgacctggtcaa 393 ||||||||||||| | |||||||| || |||||||| ||||| Sbjct: 249 cggcctcacccacctcgccgtcactcccctcgacctcgtcaa 290
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.34 Identities = 37/42 (88%) Strand = Plus / Plus Query: 352 cggcctcacccacatggccgtcaccccgctcgacctggtcaa 393 ||||||||||||| | |||||||| || |||||||| ||||| Sbjct: 8629245 cggcctcacccacctcgccgtcactcccctcgacctcgtcaa 8629286
>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02, complete sequence Length = 137327 Score = 44.1 bits (22), Expect = 0.34 Identities = 37/42 (88%) Strand = Plus / Plus Query: 352 cggcctcacccacatggccgtcaccccgctcgacctggtcaa 393 ||||||||||||| | |||||||| || |||||||| ||||| Sbjct: 110217 cggcctcacccacctcgccgtcactcccctcgacctcgtcaa 110258
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.34 Identities = 37/42 (88%) Strand = Plus / Plus Query: 352 cggcctcacccacatggccgtcaccccgctcgacctggtcaa 393 ||||||||||||| | |||||||| || |||||||| ||||| Sbjct: 8627080 cggcctcacccacctcgccgtcactcccctcgacctcgtcaa 8627121
>dbj|AK058971.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-D01, full insert sequence Length = 1849 Score = 44.1 bits (22), Expect = 0.34 Identities = 37/42 (88%) Strand = Plus / Plus Query: 352 cggcctcacccacatggccgtcaccccgctcgacctggtcaa 393 ||||||||||||| | |||||||| || |||||||| ||||| Sbjct: 529 cggcctcacccacctcgccgtcactcccctcgacctcgtcaa 570
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 cgacctctcccgcgactcgct 120 ||||||||||||||||||||| Sbjct: 285209 cgacctctcccgcgactcgct 285229
>dbj|AK071044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081F09, full insert sequence Length = 1809 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ggcccggcggcgatggcgctc 97 ||||||||||||||||||||| Sbjct: 97 ggcccggcggcgatggcgctc 117
>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21, complete sequence Length = 139298 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ggcccggcggcgatggcgctc 97 ||||||||||||||||||||| Sbjct: 54111 ggcccggcggcgatggcgctc 54091
>gb|BC017454.1| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA (cDNA clone MGC:20429 IMAGE:4647090), complete cds Length = 1004 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cggcccggcggcgatggcgc 95 |||||||||||||||||||| Sbjct: 41 cggcccggcggcgatggcgc 60
>gb|BC022334.1| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA (cDNA clone MGC:22779 IMAGE:4703567), complete cds Length = 930 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cggcccggcggcgatggcgc 95 |||||||||||||||||||| Sbjct: 23 cggcccggcggcgatggcgc 42
>ref|XM_752711.1| Ustilago maydis 521 hypothetical protein (UM01657.1) partial mRNA Length = 5787 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 gcgcccggatctctcggccc 81 |||||||||||||||||||| Sbjct: 4126 gcgcccggatctctcggccc 4145
>gb|BC047763.1| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA (cDNA clone IMAGE:6201042), with apparent retained intron Length = 1343 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cggcccggcggcgatggcgc 95 |||||||||||||||||||| Sbjct: 30 cggcccggcggcgatggcgc 49
>gb|BC008183.1| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA (cDNA clone MGC:16998 IMAGE:4183256), complete cds Length = 994 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cggcccggcggcgatggcgc 95 |||||||||||||||||||| Sbjct: 24 cggcccggcggcgatggcgc 43
>gb|BC002516.2| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA (cDNA clone IMAGE:3140193), partial cds Length = 907 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cggcccggcggcgatggcgc 95 |||||||||||||||||||| Sbjct: 18 cggcccggcggcgatggcgc 37
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16 Length = 345012 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ctcggcccggcggcgatggcgctc 97 ||||||||||| |||||||||||| Sbjct: 224856 ctcggcccggccgcgatggcgctc 224833
>dbj|AK094291.1| Homo sapiens cDNA FLJ36972 fis, clone BRACE2006245 Length = 2161 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 cggcccggcggcgatggcgc 95 |||||||||||||||||||| Sbjct: 838 cggcccggcggcgatggcgc 819
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 tcggcccggcggcgatggcgctct 98 |||||||||||||||| ||||||| Sbjct: 37337 tcggcccggcggcgattgcgctct 37360
>ref|NM_014595.1| Homo sapiens 5', 3'-nucleotidase, cytosolic (NT5C), mRNA Length = 970 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cggcccggcggcgatggcgc 95 |||||||||||||||||||| Sbjct: 63 cggcccggcggcgatggcgc 82
>tpg|BK000192.1| TPA: TPA_exp: Homo sapiens cytosolic 5'(3')-deoxyribonucleotidase (NT5C) gene, complete cds Length = 1554 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cggcccggcggcgatggcgc 95 |||||||||||||||||||| Sbjct: 63 cggcccggcggcgatggcgc 82
>gb|AC022211.5|AC022211 Homo sapiens BAC clone RP11-649A18 from 17, complete sequence Length = 191155 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 cggcccggcggcgatggcgc 95 |||||||||||||||||||| Sbjct: 21381 cggcccggcggcgatggcgc 21362
>gb|AF154829.2|AF154829 Homo sapiens deoxy-5'-nucleotidase mRNA, complete cds Length = 970 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cggcccggcggcgatggcgc 95 |||||||||||||||||||| Sbjct: 63 cggcccggcggcgatggcgc 82
>dbj|AK000419.1| Homo sapiens cDNA FLJ20412 fis, clone KAT02154 Length = 970 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cggcccggcggcgatggcgc 95 |||||||||||||||||||| Sbjct: 63 cggcccggcggcgatggcgc 82
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 ccggcggcgatggcgctctccgac 103 |||||||||||||||||| ||||| Sbjct: 2689174 ccggcggcgatggcgctcgccgac 2689151
>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome Length = 2056416 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 cgcgcccaacgagaaaatcg 296 |||||||||||||||||||| Sbjct: 138460 cgcgcccaacgagaaaatcg 138441 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,036,524 Number of Sequences: 3902068 Number of extensions: 1036524 Number of successful extensions: 30201 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 43 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 29827 Number of HSP's gapped (non-prelim): 374 length of query: 394 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 372 effective length of database: 17,147,199,772 effective search space: 6378758315184 effective search space used: 6378758315184 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
