ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast47c11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK119177.1| Oryza sativa (japonica cultivar-group) cDNA clon... 327 1e-86
2dbj|AK065389.1| Oryza sativa (japonica cultivar-group) cDNA clon... 327 1e-86
3gb|BT009221.1| Triticum aestivum clone wle1n.pk0074.b4:fis, full... 236 4e-59
4dbj|AK072400.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 1e-49
5dbj|AK060934.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 1e-49
6gb|AY107849.1| Zea mays PCO074182 mRNA sequence 159 7e-36
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 143 4e-31
8dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic D... 143 4e-31
9gb|AY389695.1| Hyacinthus orientalis auxin-independent growth pr... 111 1e-21
10dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 96 8e-17
11dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic D... 96 8e-17
12ref|NM_113544.2| Arabidopsis thaliana unknown protein AT3G26370 ... 48 0.018
13emb|BX823242.1|CNS0A5AI Arabidopsis thaliana Full-length cDNA Co... 48 0.018
14emb|BX823660.1|CNS0A4QV Arabidopsis thaliana Full-length cDNA Co... 48 0.018
15gb|AY087604.1| Arabidopsis thaliana clone 36984 mRNA, complete s... 48 0.018
16gb|AC144543.4| Mus musculus BAC clone RP23-394E9 from 12, comple... 44 0.28
17emb|AJ238837.1|PLE238837 Peltidocotyle lenha 28S rRNA gene, part... 44 0.28
18ref|NM_003480.2| Homo sapiens microfibrillar associated protein ... 42 1.1
19gb|BC005901.1| Homo sapiens microfibrillar associated protein 5,... 42 1.1
20dbj|AK124368.1| Homo sapiens cDNA FLJ42377 fis, clone UTERU20354... 42 1.1
21emb|CR619112.1| full-length cDNA clone CS0DI087YI10 of Placenta ... 42 1.1
22emb|CR609578.1| full-length cDNA clone CS0DI060YJ19 of Placenta ... 42 1.1
23emb|CR605401.1| full-length cDNA clone CS0DI061YI19 of Placenta ... 42 1.1
24emb|CR603417.1| full-length cDNA clone CS0DI022YB08 of Placenta ... 42 1.1
25gb|AF286937.1|AF286937 Peltidocotyle rugosa 28S ribosomal RNA ge... 42 1.1
26gb|AC092490.10| Homo sapiens 12 BAC RP11-20D14 (Roswell Park Can... 42 1.1
27gb|AF084927.1|HSMAGP10 Homo sapiens microfibril-associated glyco... 42 1.1
28gb|U37283.1|HSU37283 Human microfibril-associated glycoprotein-2... 42 1.1
29emb|AJ238836.1|PLE238836 Peltidocotyle lenha 28S rRNA gene, part... 42 1.1
30emb|AJ238835.1|PRU238835 Peltidocotyle rugosa 28S rRNA gene, par... 42 1.1
31emb|AJ238834.1|PLE238834 Peltidocotyle lenha 28S rRNA, partial, ... 42 1.1
32gb|AC161798.6| Mus musculus chromosome 7, clone RP23-267I20, com... 40 4.3
33emb|AL138766.10| Human DNA sequence from clone RP11-469M11 on ch... 40 4.3
34gb|AC090013.16| Homo sapiens 12 BAC RP11-407P2 (Roswell Park Can... 40 4.3
35gb|AC118002.2| Homo sapiens chromosome 11, clone RP11-258H15, co... 40 4.3
36gb|AC093648.4| Homo sapiens BAC clone RP11-360A10 from 4, comple... 40 4.3
37gb|AC090791.6| Homo sapiens chromosome 11, clone RP11-466I1, com... 40 4.3
38gb|AC157782.7| Mus musculus chromosome 7, clone RP23-86L13, comp... 40 4.3
39emb|BX323884.5| Zebrafish DNA sequence from clone DKEY-187A12 in... 40 4.3
40gb|AC011286.7| Homo sapiens BAC clone RP11-4H21 from 2, complete... 40 4.3
41emb|BX510920.6| Zebrafish DNA sequence from clone DKEY-30J22 in ... 40 4.3 
>dbj|AK119177.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-G06, full
            insert sequence
          Length = 1997

 Score =  327 bits (165), Expect = 1e-86
 Identities = 288/329 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    taattatcacgccttaaagttcctacctgatattgaagaaatggctgataagttggcaac 60
            ||||||||| ||  |||||||||| ||||| ||||||||||||||||||||| ||||| |
Sbjct: 1022 taattatcatgcactaaagttcctgcctgacattgaagaaatggctgataagctggcagc 1081

                                                                        
Query: 61   aaagatgaggaaccgaactaccagcgggaatccatacatggcccttcatctgagatatga 120
            || ||||||||||||||||  ||| |  ||||| |||||||| ||||||||||||| |||
Sbjct: 1082 aaggatgaggaaccgaactggcagtgtaaatccgtacatggctcttcatctgagatttga 1141

                                                                        
Query: 121  gaaaggaatggtgggcctgtccttttgcgattttgctggaacacgtgacgagaaagcgat 180
            |||||||||||| |||||||||||||| ||||||||||| || || || ||||||| |||
Sbjct: 1142 gaaaggaatggtaggcctgtccttttgtgattttgctgggacgcgggaggagaaagagat 1201

                                                                        
Query: 181  gatggcagcttatagacagaaagaatggccacggcgctttaagaatggatctcacctgtg 240
            |||||| |||||||| ||||||||||||||| |||||| ||||||||| |||||||||||
Sbjct: 1202 gatggctgcttataggcagaaagaatggccaaggcgctataagaatgggtctcacctgtg 1261

                                                                        
Query: 241  gccattagcattgaaaaagaggaaagaagggcgttgcccccttgagcctggcgagatagc 300
            |||||||||  || ||||||| |||||||| |||||||| ||||||||||||||||| ||
Sbjct: 1262 gccattagctctgcaaaagagaaaagaaggccgttgccctcttgagcctggcgagatcgc 1321

                                         
Query: 301  tgtgatcctgagagcactgggatacacaa 329
            | | |||||  | |||||||| |||||||
Sbjct: 1322 tatcatcctccgggcactgggttacacaa 1350
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>dbj|AK065389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021B10, full
            insert sequence
          Length = 2052

 Score =  327 bits (165), Expect = 1e-86
 Identities = 288/329 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    taattatcacgccttaaagttcctacctgatattgaagaaatggctgataagttggcaac 60
            ||||||||| ||  |||||||||| ||||| ||||||||||||||||||||| ||||| |
Sbjct: 1014 taattatcatgcactaaagttcctgcctgacattgaagaaatggctgataagctggcagc 1073

                                                                        
Query: 61   aaagatgaggaaccgaactaccagcgggaatccatacatggcccttcatctgagatatga 120
            || ||||||||||||||||  ||| |  ||||| |||||||| ||||||||||||| |||
Sbjct: 1074 aaggatgaggaaccgaactggcagtgtaaatccgtacatggctcttcatctgagatttga 1133

                                                                        
Query: 121  gaaaggaatggtgggcctgtccttttgcgattttgctggaacacgtgacgagaaagcgat 180
            |||||||||||| |||||||||||||| ||||||||||| || || || ||||||| |||
Sbjct: 1134 gaaaggaatggtaggcctgtccttttgtgattttgctgggacgcgggaggagaaagagat 1193

                                                                        
Query: 181  gatggcagcttatagacagaaagaatggccacggcgctttaagaatggatctcacctgtg 240
            |||||| |||||||| ||||||||||||||| |||||| ||||||||| |||||||||||
Sbjct: 1194 gatggctgcttataggcagaaagaatggccaaggcgctataagaatgggtctcacctgtg 1253

                                                                        
Query: 241  gccattagcattgaaaaagaggaaagaagggcgttgcccccttgagcctggcgagatagc 300
            |||||||||  || ||||||| |||||||| |||||||| ||||||||||||||||| ||
Sbjct: 1254 gccattagctctgcaaaagagaaaagaaggccgttgccctcttgagcctggcgagatcgc 1313

                                         
Query: 301  tgtgatcctgagagcactgggatacacaa 329
            | | |||||  | |||||||| |||||||
Sbjct: 1314 tatcatcctccgggcactgggttacacaa 1342
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>gb|BT009221.1| Triticum aestivum clone wle1n.pk0074.b4:fis, full insert mRNA
           sequence
          Length = 1474

 Score =  236 bits (119), Expect = 4e-59
 Identities = 248/291 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   taattatcacgccttaaagttcctacctgatattgaagaaatggctgataagttggcaac 60
           ||||||||||||||||||||| |||||||  ||||||||||||||||| ||  |||||||
Sbjct: 475 taattatcacgccttaaagtttctacctggcattgaagaaatggctgacaaactggcaac 534

                                                                       
Query: 61  aaagatgaggaaccgaactaccagcgggaatccatacatggcccttcatctgagatatga 120
           || |||| |||| ||||||   ||||  |||||||||||||| |||||||| ||||  ||
Sbjct: 535 aaggatgcggaatcgaactgggagcgtaaatccatacatggctcttcatcttagattcga 594

                                                                       
Query: 121 gaaaggaatggtgggcctgtccttttgcgattttgctggaacacgtgacgagaaagcgat 180
           |||||||||||||||  | |||||||| ||||||||||||||  | || |||||||| ||
Sbjct: 595 gaaaggaatggtgggtttatccttttgtgattttgctggaaccagagaggagaaagcaat 654

                                                                       
Query: 181 gatggcagcttatagacagaaagaatggccacggcgctttaagaatggatctcacctgtg 240
           |||||| |  |||||||||||| |||||||| | ||||| ||||||||||||||||| ||
Sbjct: 655 gatggctgaatatagacagaaacaatggccaagacgcttcaagaatggatctcacctttg 714

                                                              
Query: 241 gccattagcattgaaaaagaggaaagaagggcgttgcccccttgagcctgg 291
           | | |||||| || ||||||| |||||||| || ||||| |||||||||||
Sbjct: 715 gtctttagcactggaaaagagaaaagaaggccgctgcccgcttgagcctgg 765
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>dbj|AK072400.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078C17, full
            insert sequence
          Length = 2520

 Score =  204 bits (103), Expect = 1e-49
 Identities = 244/291 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1    taattatcacgccttaaagttcctacctgatattgaagaaatggctgataagttggcaac 60
            |||||| || ||||| |||||  ||||||| || |||||||||||||| ||| | |||||
Sbjct: 1570 taattaccatgccttgaagtttttacctgaaatcgaagaaatggctgagaagctagcaac 1629

                                                                        
Query: 61   aaagatgaggaaccgaactaccagcgggaatccatacatggcccttcatctgagatatga 120
            || |||||||||||||||   ||  |  |||||||||||||| |||||||| || | |||
Sbjct: 1630 aaggatgaggaaccgaacgggcaatgtaaatccatacatggctcttcatcttaggtttga 1689

                                                                        
Query: 121  gaaaggaatggtgggcctgtccttttgcgattttgctggaacacgtgacgagaaagcgat 180
            ||||||||||||||| || || |||||||||||||| |||||  | || |||||||| ||
Sbjct: 1690 gaaaggaatggtgggtctttcattttgcgattttgcgggaactagagaggagaaagcaat 1749

                                                                        
Query: 181  gatggcagcttatagacagaaagaatggccacggcgctttaagaatggatctcacctgtg 240
            |||||| | ||||||||||||| |||||||| | ||||| ||||||||||||||||| ||
Sbjct: 1750 gatggctgattatagacagaaacaatggccaagacgcttcaagaatggatctcacctttg 1809

                                                               
Query: 241  gccattagcattgaaaaagaggaaagaagggcgttgcccccttgagcctgg 291
            | |||||||| || | || || |||||||| || ||||| |||||||||||
Sbjct: 1810 gtcattagcactggagaaaagaaaagaaggtcgctgccctcttgagcctgg 1860
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>dbj|AK060934.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-B09, full
           insert sequence
          Length = 1111

 Score =  204 bits (103), Expect = 1e-49
 Identities = 244/291 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   taattatcacgccttaaagttcctacctgatattgaagaaatggctgataagttggcaac 60
           |||||| || ||||| |||||  ||||||| || |||||||||||||| ||| | |||||
Sbjct: 145 taattaccatgccttgaagtttttacctgaaatcgaagaaatggctgagaagctagcaac 204

                                                                       
Query: 61  aaagatgaggaaccgaactaccagcgggaatccatacatggcccttcatctgagatatga 120
           || |||||||||||||||   ||  |  |||||||||||||| |||||||| || | |||
Sbjct: 205 aaggatgaggaaccgaacgggcaatgtaaatccatacatggctcttcatcttaggtttga 264

                                                                       
Query: 121 gaaaggaatggtgggcctgtccttttgcgattttgctggaacacgtgacgagaaagcgat 180
           ||||||||||||||| || || |||||||||||||| |||||  | || |||||||| ||
Sbjct: 265 gaaaggaatggtgggtctttcattttgcgattttgcgggaactagagaggagaaagcaat 324

                                                                       
Query: 181 gatggcagcttatagacagaaagaatggccacggcgctttaagaatggatctcacctgtg 240
           |||||| | ||||||||||||| |||||||| | ||||| ||||||||||||||||| ||
Sbjct: 325 gatggctgattatagacagaaacaatggccaagacgcttcaagaatggatctcacctttg 384

                                                              
Query: 241 gccattagcattgaaaaagaggaaagaagggcgttgcccccttgagcctgg 291
           | |||||||| || | || || |||||||| || ||||| |||||||||||
Sbjct: 385 gtcattagcactggagaaaagaaaagaaggtcgctgccctcttgagcctgg 435
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>gb|AY107849.1| Zea mays PCO074182 mRNA sequence
          Length = 723

 Score =  159 bits (80), Expect = 7e-36
 Identities = 239/291 (82%), Gaps = 1/291 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   taattatcacgccttaaagttcctacctgatattgaagaaatggctgataagttggcaac 60
           ||||||||| || || ||||| |||||||| ||||||||||||||||| ||| | |||||
Sbjct: 417 taattatcatgctttgaagtttctacctgacattgaagaaatggctgacaagctagcaac 476

                                                                       
Query: 61  aaagatgaggaaccgaactaccagcgggaatccatacatggcccttcatctgagatatga 120
           || ||||||||| |||||    ||    |||||||||||||| |||||  || ||| |||
Sbjct: 477 aaggatgaggaatcgaacaggaagtttaaatccatacatggctcttcacttgcgatttga 536

                                                                       
Query: 121 gaaaggaatggtgggcctgtccttttgcgattttgctggaacacgtgacgagaaagcgat 180
           |||||||||||||||||| || ||||| |||||||||||||| || || |||||||| ||
Sbjct: 537 gaaaggaatggtgggcctttcattttgtgattttgctggaacccgngaggagaaagctat 596

                                                                       
Query: 181 gatggcagcttatagacagaaagaatggccacggcgctttaagaatggatctcacctgtg 240
           ||||||  |||| |||||  || |||||||| |||| |  ||||||||||| ||| | ||
Sbjct: 597 gatggctacttacagacaacaacaatggccaaggcggtacaagaatggatcacacttatg 656

                                                              
Query: 241 gccattagcattgaaaaagaggaaagaagggcgttgcccccttgagcctgg 291
           |||| ||||  |  |||||| ||||| ||| || |||||||||||||||||
Sbjct: 657 gccactagcgctacaaaaga-gaaaggaggccgatgcccccttgagcctgg 706
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  143 bits (72), Expect = 4e-31
 Identities = 108/120 (90%)
 Strand = Plus / Plus

                                                                           
Query: 104     cttcatctgagatatgagaaaggaatggtgggcctgtccttttgcgattttgctggaaca 163
               ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||| || 
Sbjct: 3201541 cttcatctgagatttgagaaaggaatggtaggcctgtccttttgtgattttgctgggacg 3201600

                                                                           
Query: 164     cgtgacgagaaagcgatgatggcagcttatagacagaaagaatggccacggcgctttaag 223
               || || ||||||| ||||||||| |||||||| ||||||||||||||| |||||| ||||
Sbjct: 3201601 cgggaggagaaagagatgatggctgcttataggcagaaagaatggccaaggcgctataag 3201660



 Score =  103 bits (52), Expect = 3e-19
 Identities = 94/108 (87%)
 Strand = Plus / Plus

                                                                           
Query: 222     agaatggatctcacctgtggccattagcattgaaaaagaggaaagaagggcgttgccccc 281
               ||||||| ||||||||||||||||||||  || ||||||| |||||||| |||||||| |
Sbjct: 3201770 agaatgggtctcacctgtggccattagctctgcaaaagagaaaagaaggccgttgccctc 3201829

                                                               
Query: 282     ttgagcctggcgagatagctgtgatcctgagagcactgggatacacaa 329
               |||||||||||||||| ||| | |||||  | |||||||| |||||||
Sbjct: 3201830 ttgagcctggcgagatcgctatcatcctccgggcactgggttacacaa 3201877



 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 71/79 (89%)
 Strand = Plus / Plus

                                                                           
Query: 1       taattatcacgccttaaagttcctacctgatattgaagaaatggctgataagttggcaac 60
               ||||||||| ||  |||||||||| ||||| ||||||||||||||||||||| ||||| |
Sbjct: 3201335 taattatcatgcactaaagttcctgcctgacattgaagaaatggctgataagctggcagc 3201394

                                  
Query: 61      aaagatgaggaaccgaact 79
               || ||||||||||||||||
Sbjct: 3201395 aaggatgaggaaccgaact 3201413
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>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1103G11
          Length = 182931

 Score =  143 bits (72), Expect = 4e-31
 Identities = 108/120 (90%)
 Strand = Plus / Plus

                                                                         
Query: 104   cttcatctgagatatgagaaaggaatggtgggcctgtccttttgcgattttgctggaaca 163
             ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||| || 
Sbjct: 73728 cttcatctgagatttgagaaaggaatggtaggcctgtccttttgtgattttgctgggacg 73787

                                                                         
Query: 164   cgtgacgagaaagcgatgatggcagcttatagacagaaagaatggccacggcgctttaag 223
             || || ||||||| ||||||||| |||||||| ||||||||||||||| |||||| ||||
Sbjct: 73788 cgggaggagaaagagatgatggctgcttataggcagaaagaatggccaaggcgctataag 73847



 Score =  103 bits (52), Expect = 3e-19
 Identities = 94/108 (87%)
 Strand = Plus / Plus

                                                                         
Query: 222   agaatggatctcacctgtggccattagcattgaaaaagaggaaagaagggcgttgccccc 281
             ||||||| ||||||||||||||||||||  || ||||||| |||||||| |||||||| |
Sbjct: 73957 agaatgggtctcacctgtggccattagctctgcaaaagagaaaagaaggccgttgccctc 74016

                                                             
Query: 282   ttgagcctggcgagatagctgtgatcctgagagcactgggatacacaa 329
             |||||||||||||||| ||| | |||||  | |||||||| |||||||
Sbjct: 74017 ttgagcctggcgagatcgctatcatcctccgggcactgggttacacaa 74064



 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 71/79 (89%)
 Strand = Plus / Plus

                                                                         
Query: 1     taattatcacgccttaaagttcctacctgatattgaagaaatggctgataagttggcaac 60
             ||||||||| ||  |||||||||| ||||| ||||||||||||||||||||| ||||| |
Sbjct: 73522 taattatcatgcactaaagttcctgcctgacattgaagaaatggctgataagctggcagc 73581

                                
Query: 61    aaagatgaggaaccgaact 79
             || ||||||||||||||||
Sbjct: 73582 aaggatgaggaaccgaact 73600
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>gb|AY389695.1| Hyacinthus orientalis auxin-independent growth protein (AXI1) mRNA,
           partial cds
          Length = 635

 Score =  111 bits (56), Expect = 1e-21
 Identities = 125/148 (84%)
 Strand = Plus / Plus

                                                                       
Query: 95  tacatggcccttcatctgagatatgagaaaggaatggtgggcctgtccttttgcgatttt 154
           |||||||| |||||| |||| | |||||| ||||||||||| || ||||| || ||||||
Sbjct: 476 tacatggcacttcatttgaggtttgagaagggaatggtgggtctttccttctgtgatttt 535

                                                                       
Query: 155 gctggaacacgtgacgagaaagcgatgatggcagcttatagacagaaagaatggccacgg 214
           |  |||||| | || |||||||| |||||||| || ||||||||||| ||||||||  ||
Sbjct: 536 gtcggaacaagagaggagaaagcaatgatggccgcatatagacagaaggaatggccgagg 595

                                       
Query: 215 cgctttaagaatggatctcacctgtggc 242
           || | |||||||||||||||||| ||||
Sbjct: 596 cggtataagaatggatctcacctttggc 623
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 95.6 bits (48), Expect = 8e-17
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                            
Query: 104      cttcatctgagatatgagaaaggaatggtgggcctgtccttttgcgattttgctggaaca 163
                |||||||| || | |||||||||||||||||| || || |||||||||||||| ||||| 
Sbjct: 28276084 cttcatcttaggtttgagaaaggaatggtgggtctttcattttgcgattttgcgggaact 28276025

                                                                
Query: 164      cgtgacgagaaagcgatgatggcagcttatagacagaaagaatggcca 211
                 | || |||||||| |||||||| | ||||||||||||| ||||||||
Sbjct: 28276024 agagaggagaaagcaatgatggctgattatagacagaaacaatggcca 28275977



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                            
Query: 1        taattatcacgccttaaagttcctacctgatattgaagaaatggctgataagttggcaac 60
                |||||| || ||||| |||||  ||||||| || |||||||||||||| ||| | |||||
Sbjct: 28276275 taattaccatgccttgaagtttttacctgaaatcgaagaaatggctgagaagctagcaac 28276216

                                  
Query: 61       aaagatgaggaaccgaac 78
                || |||||||||||||||
Sbjct: 28276215 aaggatgaggaaccgaac 28276198



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                            
Query: 222      agaatggatctcacctgtggccattagcattgaaaaagaggaaagaagggcgttgccccc 281
                |||||||||||||||| ||| |||||||| || | || || |||||||| || ||||| |
Sbjct: 28275855 agaatggatctcacctttggtcattagcactggagaaaagaaaagaaggtcgctgccctc 28275796

                          
Query: 282      ttgagcctgg 291
                ||||||||||
Sbjct: 28275795 ttgagcctgg 28275786
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>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0623A10
          Length = 156517

 Score = 95.6 bits (48), Expect = 8e-17
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                         
Query: 104   cttcatctgagatatgagaaaggaatggtgggcctgtccttttgcgattttgctggaaca 163
             |||||||| || | |||||||||||||||||| || || |||||||||||||| ||||| 
Sbjct: 74113 cttcatcttaggtttgagaaaggaatggtgggtctttcattttgcgattttgcgggaact 74054

                                                             
Query: 164   cgtgacgagaaagcgatgatggcagcttatagacagaaagaatggcca 211
              | || |||||||| |||||||| | ||||||||||||| ||||||||
Sbjct: 74053 agagaggagaaagcaatgatggctgattatagacagaaacaatggcca 74006



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                         
Query: 1     taattatcacgccttaaagttcctacctgatattgaagaaatggctgataagttggcaac 60
             |||||| || ||||| |||||  ||||||| || |||||||||||||| ||| | |||||
Sbjct: 74304 taattaccatgccttgaagtttttacctgaaatcgaagaaatggctgagaagctagcaac 74245

                               
Query: 61    aaagatgaggaaccgaac 78
             || |||||||||||||||
Sbjct: 74244 aaggatgaggaaccgaac 74227



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                         
Query: 222   agaatggatctcacctgtggccattagcattgaaaaagaggaaagaagggcgttgccccc 281
             |||||||||||||||| ||| |||||||| || | || || |||||||| || ||||| |
Sbjct: 73884 agaatggatctcacctttggtcattagcactggagaaaagaaaagaaggtcgctgccctc 73825

                       
Query: 282   ttgagcctgg 291
             ||||||||||
Sbjct: 73824 ttgagcctgg 73815
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>ref|NM_113544.2| Arabidopsis thaliana unknown protein AT3G26370 mRNA, complete cds
          Length = 2000

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 89   aatccatacatggcccttcatctgagatatgagaaaggaatggt 132
            |||||||| ||||| |||||||| ||||  ||||||||||||||
Sbjct: 1128 aatccatatatggctcttcatcttagattcgagaaaggaatggt 1171
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>emb|BX823242.1|CNS0A5AI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS15ZD06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 953

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 89  aatccatacatggcccttcatctgagatatgagaaaggaatggt 132
           |||||||| ||||| |||||||| ||||  ||||||||||||||
Sbjct: 118 aatccatatatggctcttcatcttagattcgagaaaggaatggt 161
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>emb|BX823660.1|CNS0A4QV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS63ZC08 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1969

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 89   aatccatacatggcccttcatctgagatatgagaaaggaatggt 132
            |||||||| ||||| |||||||| ||||  ||||||||||||||
Sbjct: 1129 aatccatatatggctcttcatcttagattcgagaaaggaatggt 1172
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>gb|AY087604.1| Arabidopsis thaliana clone 36984 mRNA, complete sequence
          Length = 1216

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 89  aatccatacatggcccttcatctgagatatgagaaaggaatggt 132
           |||||||| ||||| |||||||| ||||  ||||||||||||||
Sbjct: 344 aatccatatatggctcttcatcttagattcgagaaaggaatggt 387
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>gb|AC144543.4| Mus musculus BAC clone RP23-394E9 from 12, complete sequence
          Length = 219234

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 300    ctgtgatcctgagagcactggg 321
              ||||||||||||||||||||||
Sbjct: 117937 ctgtgatcctgagagcactggg 117916
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>emb|AJ238837.1|PLE238837 Peltidocotyle lenha 28S rRNA gene, partial, specimen INVE 22373
          Length = 992

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 127 aatggtgggcctgtccttttgc 148
           ||||||||||||||||||||||
Sbjct: 480 aatggtgggcctgtccttttgc 501
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>ref|NM_003480.2| Homo sapiens microfibrillar associated protein 5 (MFAP5), mRNA
          Length = 2900

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 249 cattgaaaaagaggaaagaag 269
           |||||||||||||||||||||
Sbjct: 737 cattgaaaaagaggaaagaag 757
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>gb|BC005901.1| Homo sapiens microfibrillar associated protein 5, mRNA (cDNA clone
           MGC:14490 IMAGE:4247343), complete cds
          Length = 1005

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 249 cattgaaaaagaggaaagaag 269
           |||||||||||||||||||||
Sbjct: 578 cattgaaaaagaggaaagaag 598
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>dbj|AK124368.1| Homo sapiens cDNA FLJ42377 fis, clone UTERU2035469, moderately
           similar to Mus musculus microfibril-associated
           glycoprotein-2 (Magp2) mRNA
          Length = 2308

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 249 cattgaaaaagaggaaagaag 269
           |||||||||||||||||||||
Sbjct: 709 cattgaaaaagaggaaagaag 729
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>emb|CR619112.1| full-length cDNA clone CS0DI087YI10 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 2565

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 249 cattgaaaaagaggaaagaag 269
           |||||||||||||||||||||
Sbjct: 432 cattgaaaaagaggaaagaag 452
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>emb|CR609578.1| full-length cDNA clone CS0DI060YJ19 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1474

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 249 cattgaaaaagaggaaagaag 269
           |||||||||||||||||||||
Sbjct: 599 cattgaaaaagaggaaagaag 619
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>emb|CR605401.1| full-length cDNA clone CS0DI061YI19 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1455

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 249 cattgaaaaagaggaaagaag 269
           |||||||||||||||||||||
Sbjct: 599 cattgaaaaagaggaaagaag 619
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>emb|CR603417.1| full-length cDNA clone CS0DI022YB08 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1420

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 249 cattgaaaaagaggaaagaag 269
           |||||||||||||||||||||
Sbjct: 614 cattgaaaaagaggaaagaag 634
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>gb|AF286937.1|AF286937 Peltidocotyle rugosa 28S ribosomal RNA gene, partial sequence
          Length = 1300

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 127 aatggtgggcctgtccttttg 147
           |||||||||||||||||||||
Sbjct: 486 aatggtgggcctgtccttttg 506
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>gb|AC092490.10| Homo sapiens 12 BAC RP11-20D14 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 173911

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 249  cattgaaaaagaggaaagaag 269
            |||||||||||||||||||||
Sbjct: 1702 cattgaaaaagaggaaagaag 1682
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>gb|AF084927.1|HSMAGP10 Homo sapiens microfibril-associated glycoprotein 2 (MAGP2) gene,
           exon 10 and complete cds
          Length = 537

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 249 cattgaaaaagaggaaagaag 269
           |||||||||||||||||||||
Sbjct: 155 cattgaaaaagaggaaagaag 175
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>gb|U37283.1|HSU37283 Human microfibril-associated glycoprotein-2 MAGP-2 mRNA, complete
           cds
          Length = 911

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 249 cattgaaaaagaggaaagaag 269
           |||||||||||||||||||||
Sbjct: 710 cattgaaaaagaggaaagaag 730
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>emb|AJ238836.1|PLE238836 Peltidocotyle lenha 28S rRNA gene, partial, specimen INVE 22021
          Length = 993

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 127 aatggtgggcctgtccttttg 147
           |||||||||||||||||||||
Sbjct: 480 aatggtgggcctgtccttttg 500
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>emb|AJ238835.1|PRU238835 Peltidocotyle rugosa 28S rRNA gene, partial, specimen INVE 22374
          Length = 995

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 127 aatggtgggcctgtccttttg 147
           |||||||||||||||||||||
Sbjct: 480 aatggtgggcctgtccttttg 500
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>emb|AJ238834.1|PLE238834 Peltidocotyle lenha 28S rRNA, partial, specimen INVE 21912
          Length = 992

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 127 aatggtgggcctgtccttttg 147
           |||||||||||||||||||||
Sbjct: 480 aatggtgggcctgtccttttg 500
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>gb|AC161798.6| Mus musculus chromosome 7, clone RP23-267I20, complete sequence
          Length = 182519

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    tagcattgaaaaagaggaaa 265
              ||||||||||||||||||||
Sbjct: 157672 tagcattgaaaaagaggaaa 157691
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>emb|AL138766.10| Human DNA sequence from clone RP11-469M11 on chromosome 10, complete
             sequence
          Length = 131207

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 302   gtgatcctgagagcactggg 321
             ||||||||||||||||||||
Sbjct: 78912 gtgatcctgagagcactggg 78893
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>gb|AC090013.16| Homo sapiens 12 BAC RP11-407P2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 85446

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   ttatagacagaaagaatggc 209
             ||||||||||||||||||||
Sbjct: 59868 ttatagacagaaagaatggc 59887
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>gb|AC118002.2| Homo sapiens chromosome 11, clone RP11-258H15, complete sequence
          Length = 160686

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 251    ttgaaaaagaggaaagaagg 270
              ||||||||||||||||||||
Sbjct: 119863 ttgaaaaagaggaaagaagg 119882
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>gb|AC093648.4| Homo sapiens BAC clone RP11-360A10 from 4, complete sequence
          Length = 84761

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 131   gtgggcctgtccttttgcgatttt 154
             |||||||||||||||||| |||||
Sbjct: 46911 gtgggcctgtccttttgccatttt 46934
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>gb|AC090791.6| Homo sapiens chromosome 11, clone RP11-466I1, complete sequence
          Length = 172865

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 251    ttgaaaaagaggaaagaagg 270
              ||||||||||||||||||||
Sbjct: 103638 ttgaaaaagaggaaagaagg 103657
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>gb|AC157782.7| Mus musculus chromosome 7, clone RP23-86L13, complete sequence
          Length = 167982

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 246  tagcattgaaaaagaggaaa 265
            ||||||||||||||||||||
Sbjct: 1211 tagcattgaaaaagaggaaa 1230
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>emb|BX323884.5| Zebrafish DNA sequence from clone DKEY-187A12 in linkage group 13,
             complete sequence
          Length = 137509

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 155   gctggaacacgtgacgagaaagcg 178
             |||||||||||||||| |||||||
Sbjct: 99409 gctggaacacgtgacgtgaaagcg 99386
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>gb|AC011286.7| Homo sapiens BAC clone RP11-4H21 from 2, complete sequence
          Length = 168863

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   tgaaaaagaggaaagaaggg 271
             ||||||||||||||||||||
Sbjct: 73101 tgaaaaagaggaaagaaggg 73082
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>emb|BX510920.6| Zebrafish DNA sequence from clone DKEY-30J22 in linkage group 20,
             complete sequence
          Length = 220240

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 243   cattagcattgaaaaagagg 262
             ||||||||||||||||||||
Sbjct: 66235 cattagcattgaaaaagagg 66216


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,008,384
Number of Sequences: 3902068
Number of extensions: 3008384
Number of successful extensions: 58386
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58301
Number of HSP's gapped (non-prelim): 84
length of query: 329
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 307
effective length of database: 17,147,199,772
effective search space: 5264190330004
effective search space used: 5264190330004
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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