ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast47c10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_187973.1| Oryza sativa (japonica cultivar-group), Ozsa839... 167 4e-38
2dbj|AK071545.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 123 6e-25
4dbj|AP001366.1| Oryza sativa (japonica cultivar-group) genomic D... 123 6e-25
5emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genom... 48 0.027
6gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 46 0.11
7emb|BX000520.12| Mouse DNA sequence from clone RP23-261N8 on chr... 46 0.11
8ref|XM_510763.1| PREDICTED: Pan troglodytes similar to CDNA sequ... 44 0.42
9ref|XM_414651.1| PREDICTED: Gallus gallus similar to Ubiquinol-c... 44 0.42
10ref|XM_957217.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.42
11ref|XM_328373.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.42
12gb|AC104833.6| Mus Musculus Strain C57BL6/J Chromosome 15 BAC, R... 44 0.42
13gb|AC068633.13| Homo sapiens 3 BAC RP11-155B15 (Roswell Park Can... 44 0.42
14gb|AF083424.1|AF083424 Ateline herpesvirus 3 complete genome 44 0.42
15gb|AC167334.3| Gallus gallus BAC clone CH261-18C17 from chromoso... 44 0.42
16gb|AC159985.2| Gallus gallus BAC clone CH261-18F10 from chromoso... 44 0.42
17gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
18gb|AY596305.1| Chlamydomonas reinhardtii cell wall protein GP2 (... 42 1.7
19gb|AC106738.3| Homo sapiens chromosome 16 clone CTD-3032H12, com... 42 1.7
20gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 1.7
21emb|CR555306.1| Azoarcus sp. EbN1 complete genome 42 1.7
22dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
23gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 1.7
24emb|AL928574.7| Mouse DNA sequence from clone RP23-332L19 on chr... 42 1.7
25gb|AC120391.6| Mus musculus chromosome 1, clone RP24-310B3, comp... 40 6.6
26ref|XM_469226.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.6
27gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 6.6
28gb|AC150004.3| Mus musculus chromosome 7, clone RP24-368P9, comp... 40 6.6
29gb|AY669386.1| Chlamydomonas reinhardtii nitrite/nitrate transpo... 40 6.6
30ref|XM_950856.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.6
31ref|XM_326261.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.6
32gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 6.6
33gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 6.6
34gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.6
35gb|AC121314.7| Mus musculus chromosome 1, clone RP24-429M15, com... 40 6.6
36ref|XM_986931.1| PREDICTED: Mus musculus centrosomal protein 350... 40 6.6
37ref|XM_916986.2| PREDICTED: Mus musculus centrosomal protein 350... 40 6.6
38ref|XM_129509.8| PREDICTED: Mus musculus centrosomal protein 350... 40 6.6
39gb|AC110234.11| Mus musculus chromosome 5, clone RP23-76J15, com... 40 6.6
40emb|AL158155.24| Human DNA sequence from clone RP11-397D12 on ch... 40 6.6
41gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 6.6
42emb|AL354864.16| Human DNA sequence from clone RP11-435D7 on chr... 40 6.6
43emb|AL121756.14|HSDJ726C3 Human DNA sequence from clone RP4-726C... 40 6.6
44gb|AC090671.5| Homo sapiens 12 BAC RP11-755O11 (Roswell Park Can... 40 6.6
45emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.6
46emb|BX640425.1| Bordetella parapertussis strain 12822, complete ... 40 6.6
47emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genom... 40 6.6
48emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.6
49emb|AL670999.4| Mouse DNA sequence from clone RP23-168F16 on chr... 40 6.6
50emb|BX322649.4| Mouse DNA sequence from clone RP23-206P23 on chr... 40 6.6
51emb|CR536608.3| Human DNA sequence from clone CITF22-5B3 on chro... 40 6.6
52dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl... 40 6.6
53gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 6.6
54gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 40 6.6
55gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 40 6.6
56gb|AE005689.1| Caulobacter crescentus CB15 section 15 of 359 of ... 40 6.6
57gb|AE012185.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 6.6
58gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 6.6
59gb|DQ311227.1| Bombyx mori transketolase mRNA, complete cds 40 6.6
60gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 6.6
61gb|AC116369.5| Oryza sativa chromosome 3 BAC OSJNBb0113I20 genom... 40 6.6
62gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 6.6
63emb|AL110708.1|CNS018RH Botrytis cinerea strain T4 cDNA library 40 6.6
64gb|U33324.1|CCU33324 Caulobacter crescentus RNase PH (rph) gene,... 40 6.6
65dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
66gb|AC068291.6| Homo sapiens BAC clone RP11-670I21 from 2, comple... 40 6.6
67dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.6
68gb|AC130310.17| Homo sapiens chromosome 11, clone RP11-269A12, c... 40 6.6
69gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.6
70dbj|AK172956.1| Mus musculus mRNA for mKIAA0480 protein 40 6.6
71emb|AJ414383.1|RSO414383 Ralstonia solanacearum partial mutS gene 40 6.6
72dbj|AP006285.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.6
73emb|AJ223296.2|CRAJ3296 Chlamydomonas reinhardtii Nrt2;3 gene fo... 40 6.6
74emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 6.6
75gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.6
76emb|AL844588.17| Mouse DNA sequence from clone RP23-244N6 on chr... 40 6.6
77gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 6.6
78emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete ... 40 6.6
79gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 6.6
80gb|AC102628.5| Mus musculus chromosome 7, clone RP23-467K15, com... 40 6.6
81emb|AL603829.5| Mouse DNA sequence from clone RP23-416G21 on chr... 40 6.6 
>ref|NM_187973.1| Oryza sativa (japonica cultivar-group), Ozsa8393 predicted mRNA
          Length = 678

 Score =  167 bits (84), Expect = 4e-38
 Identities = 203/240 (84%), Gaps = 2/240 (0%)
 Strand = Plus / Plus

                                                                       
Query: 250 ggtggcgtccggggtggtgttctggtcgacggcgttcctgctgctgcg-ggcgctgctcc 308
           ||||| ||||||||||| |||||||| ||||||||||||||||  ||| |||||   |||
Sbjct: 12  ggtggtgtccggggtggcgttctggtggacggcgttcctgctggcgcgcggcgcct-tcc 70

                                                                       
Query: 309 ccaagcgctcctacgacttctgcaaccgcgccgtctccaccatgcacgccgtcaccggcg 368
           |||||||||||||||||||||||||||||||||||||| ||   ||||||| | ||| ||
Sbjct: 71  ccaagcgctcctacgacttctgcaaccgcgccgtctccgccgcccacgccgccgccgccg 130

                                                                       
Query: 369 tcgccctcggctgcctctccgtgcaggactgggcctcccccgtctcccccgtcgcctcac 428
           || |||||| ||||||||||||    |||||| ||  |||| |||||||| ||||| |  
Sbjct: 131 tctccctcgcctgcctctccgtcgccgactggtcccgccccctctcccccctcgccgccg 190

                                                                       
Query: 429 catcctcgccgcgccagatgagggcgctggcggtgacgctgtcgtacatgatctacgacg 488
           | ||||| || | |||||||| |||||||||||||||||||||||||||| | |||||||
Sbjct: 191 cctcctcccctccccagatgaaggcgctggcggtgacgctgtcgtacatggtgtacgacg 250
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>dbj|AK071545.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099M14, full
           insert sequence
          Length = 865

 Score =  165 bits (83), Expect = 2e-37
 Identities = 202/239 (84%), Gaps = 2/239 (0%)
 Strand = Plus / Plus

                                                                       
Query: 251 gtggcgtccggggtggtgttctggtcgacggcgttcctgctgctgcg-ggcgctgctccc 309
           |||| ||||||||||| |||||||| ||||||||||||||||  ||| |||||   ||||
Sbjct: 1   gtggtgtccggggtggcgttctggtggacggcgttcctgctggcgcgcggcgcct-tccc 59

                                                                       
Query: 310 caagcgctcctacgacttctgcaaccgcgccgtctccaccatgcacgccgtcaccggcgt 369
           ||||||||||||||||||||||||||||||||||||| ||   ||||||| | ||| |||
Sbjct: 60  caagcgctcctacgacttctgcaaccgcgccgtctccgccgcccacgccgccgccgccgt 119

                                                                       
Query: 370 cgccctcggctgcctctccgtgcaggactgggcctcccccgtctcccccgtcgcctcacc 429
           | |||||| ||||||||||||    |||||| ||  |||| |||||||| ||||| |  |
Sbjct: 120 ctccctcgcctgcctctccgtcgccgactggtcccgccccctctcccccctcgccgccgc 179

                                                                      
Query: 430 atcctcgccgcgccagatgagggcgctggcggtgacgctgtcgtacatgatctacgacg 488
            ||||| || | |||||||| |||||||||||||||||||||||||||| | |||||||
Sbjct: 180 ctcctcccctccccagatgaaggcgctggcggtgacgctgtcgtacatggtgtacgacg 238
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  123 bits (62), Expect = 6e-25
 Identities = 124/142 (87%), Gaps = 2/142 (1%)
 Strand = Plus / Plus

                                                                           
Query: 250     ggtggcgtccggggtggtgttctggtcgacggcgttcctgctgctgcg-ggcgctgctcc 308
               ||||| ||||||||||| |||||||| ||||||||||||||||  ||| |||||   |||
Sbjct: 8882492 ggtggtgtccggggtggcgttctggtggacggcgttcctgctggcgcgcggcgcct-tcc 8882550

                                                                           
Query: 309     ccaagcgctcctacgacttctgcaaccgcgccgtctccaccatgcacgccgtcaccggcg 368
               |||||||||||||||||||||||||||||||||||||| ||   ||||||| | ||| ||
Sbjct: 8882551 ccaagcgctcctacgacttctgcaaccgcgccgtctccgccgcccacgccgccgccgccg 8882610

                                     
Query: 369     tcgccctcggctgcctctccgt 390
               || |||||| ||||||||||||
Sbjct: 8882611 tctccctcgcctgcctctccgt 8882632



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                             
Query: 443     cagatgagggcgctggcggtgacgctgtcgtacatgatctacgacg 488
               ||||||| |||||||||||||||||||||||||||| | |||||||
Sbjct: 8882790 cagatgaaggcgctggcggtgacgctgtcgtacatggtgtacgacg 8882835
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>dbj|AP001366.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0469E09
          Length = 146081

 Score =  123 bits (62), Expect = 6e-25
 Identities = 124/142 (87%), Gaps = 2/142 (1%)
 Strand = Plus / Plus

                                                                          
Query: 250    ggtggcgtccggggtggtgttctggtcgacggcgttcctgctgctgcg-ggcgctgctcc 308
              ||||| ||||||||||| |||||||| ||||||||||||||||  ||| |||||   |||
Sbjct: 118520 ggtggtgtccggggtggcgttctggtggacggcgttcctgctggcgcgcggcgcct-tcc 118578

                                                                          
Query: 309    ccaagcgctcctacgacttctgcaaccgcgccgtctccaccatgcacgccgtcaccggcg 368
              |||||||||||||||||||||||||||||||||||||| ||   ||||||| | ||| ||
Sbjct: 118579 ccaagcgctcctacgacttctgcaaccgcgccgtctccgccgcccacgccgccgccgccg 118638

                                    
Query: 369    tcgccctcggctgcctctccgt 390
              || |||||| ||||||||||||
Sbjct: 118639 tctccctcgcctgcctctccgt 118660



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                            
Query: 443    cagatgagggcgctggcggtgacgctgtcgtacatgatctacgacg 488
              ||||||| |||||||||||||||||||||||||||| | |||||||
Sbjct: 118818 cagatgaaggcgctggcggtgacgctgtcgtacatggtgtacgacg 118863
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>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16
          Length = 348971

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 350   atgcacgccgtcaccggcgtcgcc 373
             ||||||||||||||||||||||||
Sbjct: 66953 atgcacgccgtcaccggcgtcgcc 66930
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 195     cgtcgtcgccgcgaagccgccgc 217
               |||||||||||||||||||||||
Sbjct: 3491871 cgtcgtcgccgcgaagccgccgc 3491893
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>emb|BX000520.12| Mouse DNA sequence from clone RP23-261N8 on chromosome X, complete
             sequence
          Length = 112153

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 16    ccctctcttccccccttccctgcctcccaccgtcc 50
             ||||| ||||||||||||||| |||||| ||||||
Sbjct: 26540 ccctcccttccccccttccctccctccctccgtcc 26506
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>ref|XM_510763.1| PREDICTED: Pan troglodytes similar to CDNA sequence BC038613
            (LOC453855), mRNA
          Length = 2982

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 285  tcctgctgctgcgggcgctgctccccaagc 314
            |||||||||| || ||||||||||||||||
Sbjct: 1487 tcctgctgctccgagcgctgctccccaagc 1458
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>ref|XM_414651.1| PREDICTED: Gallus gallus similar to Ubiquinol-cytochrome C
          reductase complex ubiquinone-binding protein QP-C
          (Ubiquinol-cytochrome C reductase complex 9.5 kDa
          protein) (Complex III subunit VII) (LOC416336), mRNA
          Length = 1150

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 17 cctctcttccccccttccctgc 38
          ||||||||||||||||||||||
Sbjct: 26 cctctcttccccccttccctgc 47
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>ref|XM_957217.1| Neurospora crassa OR74A hypothetical protein (NCU07668.1) partial
           mRNA
          Length = 1656

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 394 ggactgggcctcccccgtctcccccgtcgcctca 427
           ||||||||||||| || |||||||||||| ||||
Sbjct: 861 ggactgggcctccaccatctcccccgtcgactca 828
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>ref|XM_328373.1| Neurospora crassa OR74A hypothetical protein (NCU07668.1) partial
           mRNA
          Length = 1656

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 394 ggactgggcctcccccgtctcccccgtcgcctca 427
           ||||||||||||| || |||||||||||| ||||
Sbjct: 861 ggactgggcctccaccatctcccccgtcgactca 828
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>gb|AC104833.6| Mus Musculus Strain C57BL6/J Chromosome 15 BAC, RP23-319B16, Complete
              Sequence, complete sequence
          Length = 171061

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 25     ccccccttccctgcctcccacc 46
              ||||||||||||||||||||||
Sbjct: 155688 ccccccttccctgcctcccacc 155667
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>gb|AC068633.13| Homo sapiens 3 BAC RP11-155B15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 161735

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 18     ctctcttccccccttccctgcctccc 43
              ||||||||||||||||||| ||||||
Sbjct: 109774 ctctcttccccccttccctccctccc 109799
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>gb|AF083424.1|AF083424 Ateline herpesvirus 3 complete genome
          Length = 108409

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 403    ctcccccgtctcccccgtcgcc 424
              ||||||||||||||||||||||
Sbjct: 102185 ctcccccgtctcccccgtcgcc 102206



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 403    ctcccccgtctcccccgtcg 422
              ||||||||||||||||||||
Sbjct: 102122 ctcccccgtctcccccgtcg 102141



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 403    ctcccccgtctcccccgtcg 422
              ||||||||||||||||||||
Sbjct: 102023 ctcccccgtctcccccgtcg 102042



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 405    cccccgtctcccccgtcgcc 424
              ||||||||||||||||||||
Sbjct: 101971 cccccgtctcccccgtcgcc 101990
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>gb|AC167334.3| Gallus gallus BAC clone CH261-18C17 from chromosome unknown, complete
              sequence
          Length = 220538

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 17     cctctcttccccccttccctgc 38
              ||||||||||||||||||||||
Sbjct: 163252 cctctcttccccccttccctgc 163231
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>gb|AC159985.2| Gallus gallus BAC clone CH261-18F10 from chromosome unknown,
           complete sequence
          Length = 211288

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 17  cctctcttccccccttccctgc 38
           ||||||||||||||||||||||
Sbjct: 916 cctctcttccccccttccctgc 895
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>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05,
             complete sequence
          Length = 108479

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 363   ccggcgtcgccctcggctgcctctc 387
             |||||| ||||||||||||||||||
Sbjct: 76454 ccggcgccgccctcggctgcctctc 76430
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>gb|AY596305.1| Chlamydomonas reinhardtii cell wall protein GP2 (GP2) mRNA, partial
            cds
          Length = 4218

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 402  cctcccccgtctcccccgtcgcctc 426
            ||||||||| |||||||||||||||
Sbjct: 2623 cctcccccgactcccccgtcgcctc 2647
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>gb|AC106738.3| Homo sapiens chromosome 16 clone CTD-3032H12, complete sequence
          Length = 152312

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 21    tcttccccccttccctgcctcccac 45
             |||||||||||||||| ||||||||
Sbjct: 87239 tcttccccccttccctccctcccac 87215
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 284     ttcctgctgctgcgggcgctg 304
               |||||||||||||||||||||
Sbjct: 4846236 ttcctgctgctgcgggcgctg 4846256
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 461     gtgacgctgtcgtacatgatc 481
               |||||||||||||||||||||
Sbjct: 3452298 gtgacgctgtcgtacatgatc 3452278
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 363      ccggcgtcgccctcggctgcctctc 387
                |||||| ||||||||||||||||||
Sbjct: 29066399 ccggcgccgccctcggctgcctctc 29066375
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 450     gggcgctggcggtgacgctgtcgtacatg 478
               |||||||| ||| ||||||||||||||||
Sbjct: 1618730 gggcgctgacggcgacgctgtcgtacatg 1618758



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 197     tcgtcgccgcgaagccgccg 216
               ||||||||||||||||||||
Sbjct: 2322438 tcgtcgccgcgaagccgccg 2322457
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>emb|AL928574.7| Mouse DNA sequence from clone RP23-332L19 on chromosome 4, complete
             sequence
          Length = 114436

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    ccctctcttccccccttccct 36
             |||||||||||||||||||||
Sbjct: 66199 ccctctcttccccccttccct 66179
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>gb|AC120391.6| Mus musculus chromosome 1, clone RP24-310B3, complete sequence
          Length = 172679

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 283   gttcctgctgctgcgggcgctgct 306
             ||||||||||||||||| ||||||
Sbjct: 42389 gttcctgctgctgcgggtgctgct 42366
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>ref|XM_469226.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 999

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 235 cggcgtggcgagcctggtggcgtc 258
           ||||||||||||| ||||||||||
Sbjct: 432 cggcgtggcgagcttggtggcgtc 455
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 197     tcgtcgccgcgaagccgccg 216
               ||||||||||||||||||||
Sbjct: 1589474 tcgtcgccgcgaagccgccg 1589455
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>gb|AC150004.3| Mus musculus chromosome 7, clone RP24-368P9, complete sequence
          Length = 176113

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     tccccccttccctgcctccc 43
              ||||||||||||||||||||
Sbjct: 120381 tccccccttccctgcctccc 120362
to top
>gb|AY669386.1| Chlamydomonas reinhardtii nitrite/nitrate transporter (Nrt2;3) mRNA,
            complete cds, alternatively spliced
          Length = 2733

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 287  ctgctgctgcgggcgctgctcccc 310
            |||||||||||| |||||||||||
Sbjct: 1732 ctgctgctgcggccgctgctcccc 1709
to top
>ref|XM_950856.1| Neurospora crassa OR74A hypothetical protein (NCU06407.1) partial
            mRNA
          Length = 3396

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 403  ctcccccgtctcccccgtcg 422
            ||||||||||||||||||||
Sbjct: 2886 ctcccccgtctcccccgtcg 2905
to top
>ref|XM_326261.1| Neurospora crassa OR74A hypothetical protein (NCU06407.1) partial
            mRNA
          Length = 3396

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 403  ctcccccgtctcccccgtcg 422
            ||||||||||||||||||||
Sbjct: 2886 ctcccccgtctcccccgtcg 2905
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 197     tcgtcgccgcgaagccgccg 216
               ||||||||||||||||||||
Sbjct: 2836042 tcgtcgccgcgaagccgccg 2836023
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 230     tacggcggcgtggcgagcctggtg 253
               ||||||||||||||| ||||||||
Sbjct: 5446413 tacggcggcgtggcgggcctggtg 5446436
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 235      cggcgtggcgagcctggtggcgtc 258
                ||||||||||||| ||||||||||
Sbjct: 26221606 cggcgtggcgagcttggtggcgtc 26221583
to top
>gb|AC121314.7| Mus musculus chromosome 1, clone RP24-429M15, complete sequence
          Length = 175976

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 283    gttcctgctgctgcgggcgctgct 306
              ||||||||||||||||| ||||||
Sbjct: 160223 gttcctgctgctgcgggtgctgct 160200
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>ref|XM_986931.1| PREDICTED: Mus musculus centrosomal protein 350 (Cep350), mRNA
          Length = 12890

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 283  gttcctgctgctgcgggcgctgct 306
            ||||||||||||||||| ||||||
Sbjct: 7978 gttcctgctgctgcgggtgctgct 8001
to top
>ref|XM_916986.2| PREDICTED: Mus musculus centrosomal protein 350, transcript variant 5
            (Cep350), mRNA
          Length = 12896

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 283  gttcctgctgctgcgggcgctgct 306
            ||||||||||||||||| ||||||
Sbjct: 7975 gttcctgctgctgcgggtgctgct 7998
to top
>ref|XM_129509.8| PREDICTED: Mus musculus centrosomal protein 350, transcript variant 1
            (Cep350), mRNA
          Length = 12887

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 283  gttcctgctgctgcgggcgctgct 306
            ||||||||||||||||| ||||||
Sbjct: 7975 gttcctgctgctgcgggtgctgct 7998
to top
>gb|AC110234.11| Mus musculus chromosome 5, clone RP23-76J15, complete sequence
          Length = 235276

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     cctctcttccccccttccct 36
              ||||||||||||||||||||
Sbjct: 112182 cctctcttccccccttccct 112163
to top
>emb|AL158155.24| Human DNA sequence from clone RP11-397D12 on chromosome 9p12-13.3
              Contains the 3' end of a novel gene (FLJ22611), a novel
              gene, the GRHPR gene for glyoxylate
              reductase/hydroxypyruvate reductase, a novel gene
              (KIAA0354), a novel pseuodgene and a CpG island, complete
              sequence
          Length = 192336

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     tccccccttccctgcctccc 43
              ||||||||||||||||||||
Sbjct: 106524 tccccccttccctgcctccc 106505
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 361     caccggcgtcgccctcggctgcct 384
               |||||||||||| |||||||||||
Sbjct: 3181668 caccggcgtcgcgctcggctgcct 3181645
to top
>emb|AL354864.16| Human DNA sequence from clone RP11-435D7 on chromosome 1 Contains the 5'
              end of the PSMB2 gene for proteasome (prosome, macropain)
              subunit, beta type, 2, a novel transcript (FLJ38984), a
              putative novel transcript, the CLSPN gene for claspin
              homolog (Xenopus laevis) and the 5' end of the EIF2C4 gene
              for eukaryotic translation initiation factor 2C, 4,
              complete sequence
          Length = 194296

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 399    gggcctcccccgtctccccc 418
              ||||||||||||||||||||
Sbjct: 111670 gggcctcccccgtctccccc 111689
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>emb|AL121756.14|HSDJ726C3 Human DNA sequence from clone RP4-726C3 on chromosome 20 Contains the
             C20orf185 gene for the possible ortholog of potential
             ligand_binding protein RYA3 (Rat), the C20orf186 gene for
             the possible ortholog of potential ligand_binding protein
             RY2G5 (Rat), the 5' end of the SPAG4L gene for sperm
             associated antigen 4-like, a novel gene, a FAM16AX (family
             with sequence similarity 16, member A, X-linked)
             pseudogene, the BPIL3 gene for
             bactericidal/permeability-increasing protein-like 3 and a
             CpG island, complete sequence
          Length = 129502

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    ccccttccctgcctcccacc 46
             ||||||||||||||||||||
Sbjct: 75130 ccccttccctgcctcccacc 75149
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>gb|AC090671.5| Homo sapiens 12 BAC RP11-755O11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 186298

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     cccccttccctgcctcccac 45
              ||||||||||||||||||||
Sbjct: 151623 cccccttccctgcctcccac 151642
to top
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16
          Length = 349497

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 450    gggcgctggcggtgacgctgtcgt 473
              |||||||||||| |||||||||||
Sbjct: 175192 gggcgctggcggcgacgctgtcgt 175215
to top
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14
          Length = 348257

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 450    gggcgctggcggtgacgctgtcgt 473
              |||||||||||| |||||||||||
Sbjct: 298995 gggcgctggcggcgacgctgtcgt 299018
to top
>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16
          Length = 349841

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 451    ggcgctggcggtgacgctgt 470
              ||||||||||||||||||||
Sbjct: 265673 ggcgctggcggtgacgctgt 265654
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 197     tcgtcgccgcgaagccgccg 216
               ||||||||||||||||||||
Sbjct: 2566231 tcgtcgccgcgaagccgccg 2566212
to top
>emb|AL670999.4| Mouse DNA sequence from clone RP23-168F16 on chromosome 4 Contains
            the (pseudo)gene for a novel protein similar to
            high-mobility group box 1 (Hmgb1), complete sequence
          Length = 226259

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 50   ctacaactagccactgtcct 69
            ||||||||||||||||||||
Sbjct: 9913 ctacaactagccactgtcct 9932
to top
>emb|BX322649.4| Mouse DNA sequence from clone RP23-206P23 on chromosome 4, complete
             sequence
          Length = 50666

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    ctacaactagccactgtcct 69
             ||||||||||||||||||||
Sbjct: 17940 ctacaactagccactgtcct 17959
to top
>emb|CR536608.3| Human DNA sequence from clone CITF22-5B3 on chromosome 22, complete
            sequence
          Length = 9827

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 397  ctgggcctcccccgtctcccccgt 420
            ||||||||||||||| ||||||||
Sbjct: 3255 ctgggcctcccccgtttcccccgt 3232
to top
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 287    ctgctgctgcgggcgctgct 306
              ||||||||||||||||||||
Sbjct: 799080 ctgctgctgcgggcgctgct 799061
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 278     acggcgttcctgctgctgcgggcgctgc 305
               |||| |||||||||||||| ||||||||
Sbjct: 5349846 acggtgttcctgctgctgctggcgctgc 5349873
to top
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 348     ccatgcacgccgtcaccggc 367
               ||||||||||||||||||||
Sbjct: 2414977 ccatgcacgccgtcaccggc 2414958
to top
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 348     ccatgcacgccgtcaccggc 367
               ||||||||||||||||||||
Sbjct: 1987144 ccatgcacgccgtcaccggc 1987163
to top
>gb|AE005689.1| Caulobacter crescentus CB15 section 15 of 359 of the complete genome
          Length = 11119

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 199  gtcgccgcgaagccgccgcc 218
            ||||||||||||||||||||
Sbjct: 2733 gtcgccgcgaagccgccgcc 2714
to top
>gb|AE012185.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 93 of
            460 of the complete genome
          Length = 10953

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 278  acggcgttcctgctgctgcg 297
            ||||||||||||||||||||
Sbjct: 8645 acggcgttcctgctgctgcg 8626
to top
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 447     tgagggcgctggcggtgacg 466
               ||||||||||||||||||||
Sbjct: 3696848 tgagggcgctggcggtgacg 3696867
to top
>gb|DQ311227.1| Bombyx mori transketolase mRNA, complete cds
          Length = 3551

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 371 gccctcggctgcctctccgt 390
           ||||||||||||||||||||
Sbjct: 563 gccctcggctgcctctccgt 544
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 348     ccatgcacgccgtcaccggc 367
               ||||||||||||||||||||
Sbjct: 2455464 ccatgcacgccgtcaccggc 2455445
to top
>gb|AC116369.5| Oryza sativa chromosome 3 BAC OSJNBb0113I20 genomic sequence, complete
             sequence
          Length = 122939

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 235   cggcgtggcgagcctggtggcgtc 258
             ||||||||||||| ||||||||||
Sbjct: 51065 cggcgtggcgagcttggtggcgtc 51042
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 278     acggcgttcctgctgctgcg 297
               ||||||||||||||||||||
Sbjct: 4018129 acggcgttcctgctgctgcg 4018148
to top
>emb|AL110708.1|CNS018RH Botrytis cinerea strain T4 cDNA library
          Length = 660

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 16  ccctctcttccccccttccc 35
           ||||||||||||||||||||
Sbjct: 586 ccctctcttccccccttccc 605
to top
>gb|U33324.1|CCU33324 Caulobacter crescentus RNase PH (rph) gene, GrpE (grpE) gene and
           associated heat-inducible (hrcA) gene, complete cds
          Length = 2729

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 199 gtcgccgcgaagccgccgcc 218
           ||||||||||||||||||||
Sbjct: 657 gtcgccgcgaagccgccgcc 638
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 235      cggcgtggcgagcctggtggcgtc 258
                ||||||||||||| ||||||||||
Sbjct: 26312915 cggcgtggcgagcttggtggcgtc 26312892
to top
>gb|AC068291.6| Homo sapiens BAC clone RP11-670I21 from 2, complete sequence
          Length = 113955

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 20    ctcttccccccttccctgcctccc 43
             ||||||||||||||||| ||||||
Sbjct: 35136 ctcttccccccttccctccctccc 35113
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 286     cctgctgctgcgggcgctgc 305
               ||||||||||||||||||||
Sbjct: 7913989 cctgctgctgcgggcgctgc 7914008
to top
>gb|AC130310.17| Homo sapiens chromosome 11, clone RP11-269A12, complete sequence
          Length = 155537

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     tccccccttccctgcctccc 43
              ||||||||||||||||||||
Sbjct: 101388 tccccccttccctgcctccc 101407



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    tccccccttccctgcctccc 43
             ||||||||||||||||||||
Sbjct: 79332 tccccccttccctgcctccc 79313
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 233     ggcggcgtggcgagcctggtggcg 256
               |||||||||| |||||||||||||
Sbjct: 3583901 ggcggcgtggagagcctggtggcg 3583924
to top
>dbj|AK172956.1| Mus musculus mRNA for mKIAA0480 protein
          Length = 9413

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 283  gttcctgctgctgcgggcgctgct 306
            ||||||||||||||||| ||||||
Sbjct: 4503 gttcctgctgctgcgggtgctgct 4526
to top
>emb|AJ414383.1|RSO414383 Ralstonia solanacearum partial mutS gene
          Length = 2088

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 236 ggcgtggcgagcctggtggc 255
           ||||||||||||||||||||
Sbjct: 568 ggcgtggcgagcctggtggc 587
to top
>dbj|AP006285.2| Homo sapiens genomic DNA, chromosome 11 clone:RP13-25N22, complete
              sequence
          Length = 190267

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     tccccccttccctgcctccc 43
              ||||||||||||||||||||
Sbjct: 182392 tccccccttccctgcctccc 182411
to top
>emb|AJ223296.2|CRAJ3296 Chlamydomonas reinhardtii Nrt2;3 gene for nitrate transport protein
            and ppx-1 gene for protoporphyrinogen oxidase homologue
          Length = 5512

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 287  ctgctgctgcgggcgctgctcccc 310
            |||||||||||| |||||||||||
Sbjct: 4267 ctgctgctgcggccgctgctcccc 4244
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 236     ggcgtggcgagcctggtggc 255
               ||||||||||||||||||||
Sbjct: 1209171 ggcgtggcgagcctggtggc 1209152
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 453    cgctggcggtgacgctgtcg 472
              ||||||||||||||||||||
Sbjct: 402593 cgctggcggtgacgctgtcg 402612



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 450    gggcgctggcggtgacgctgtcgt 473
              ||||||||||| ||||||||||||
Sbjct: 217660 gggcgctggcgatgacgctgtcgt 217683
to top
>emb|AL844588.17| Mouse DNA sequence from clone RP23-244N6 on chromosome 2, complete
             sequence
          Length = 142422

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 19    tctcttccccccttccctgcctcccacc 46
             |||| ||||||||||||| |||||||||
Sbjct: 53139 tctcctccccccttccctccctcccacc 53112
to top
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 405     cccccgtctcccccgtcgcc 424
               ||||||||||||||||||||
Sbjct: 1497437 cccccgtctcccccgtcgcc 1497418
to top
>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29
          Length = 303450

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 362    accggcgtcgccctcggctgcctc 385
              |||||||||||||||||| |||||
Sbjct: 290592 accggcgtcgccctcggccgcctc 290615
to top
>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 445     gatgagggcgctggcggtga 464
               ||||||||||||||||||||
Sbjct: 1821266 gatgagggcgctggcggtga 1821285
to top
>gb|AC102628.5| Mus musculus chromosome 7, clone RP23-467K15, complete sequence
          Length = 178563

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    tccccccttccctgcctccc 43
             ||||||||||||||||||||
Sbjct: 39647 tccccccttccctgcctccc 39628
to top
>emb|AL603829.5| Mouse DNA sequence from clone RP23-416G21 on chromosome 11, complete
              sequence
          Length = 226220

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 16     ccctctcttccccccttccctgcc 39
              |||||||||||||||| |||||||
Sbjct: 190303 ccctctcttcccccctcccctgcc 190280


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,004,810
Number of Sequences: 3902068
Number of extensions: 3004810
Number of successful extensions: 70802
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68306
Number of HSP's gapped (non-prelim): 2494
length of query: 488
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 466
effective length of database: 17,147,199,772
effective search space: 7990595093752
effective search space used: 7990595093752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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