ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast47c05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467694.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1719 Score = 228 bits (115), Expect = 1e-56 Identities = 186/209 (88%), Gaps = 3/209 (1%) Strand = Plus / Plus Query: 182 gcggcgctgccgaggttcgcggaggcgccgcagtaccggaacggggaggggtgcccggcg 241 |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 252 gcggcgttgccgaggttcgcggaggcgccggagtacaggaacggggaggggtgcccggcg 311 Query: 242 ccgtccgcggccgcggccggcgtgtgcgacccggggctggtgcacatcgccatgaccctc 301 || | ||| | ||| || |||||||||||||||||||| |||||||| ||||| ||| Sbjct: 312 gcg---gtggcgggggcgggggtgtgcgacccggggctggtccacatcgcgatgacgctc 368 Query: 302 gacgcgcactacctgcggggctccatggcggcaatctactcgctgctcaggcacgcctcc 361 ||||||||||||||| |||| ||||||||||| |||||||||||||||| |||||| || Sbjct: 369 gacgcgcactacctgagggggtccatggcggccatctactcgctgctcaagcacgcgtcg 428 Query: 362 tgcccggagtcgctcttcttccacttcct 390 |||||||||||| | |||||||||||||| Sbjct: 429 tgcccggagtcgatattcttccacttcct 457
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 228 bits (115), Expect = 1e-56 Identities = 186/209 (88%), Gaps = 3/209 (1%) Strand = Plus / Minus Query: 182 gcggcgctgccgaggttcgcggaggcgccgcagtaccggaacggggaggggtgcccggcg 241 |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 30919542 gcggcgttgccgaggttcgcggaggcgccggagtacaggaacggggaggggtgcccggcg 30919483 Query: 242 ccgtccgcggccgcggccggcgtgtgcgacccggggctggtgcacatcgccatgaccctc 301 || | ||| | ||| || |||||||||||||||||||| |||||||| ||||| ||| Sbjct: 30919482 gcg---gtggcgggggcgggggtgtgcgacccggggctggtccacatcgcgatgacgctc 30919426 Query: 302 gacgcgcactacctgcggggctccatggcggcaatctactcgctgctcaggcacgcctcc 361 ||||||||||||||| |||| ||||||||||| |||||||||||||||| |||||| || Sbjct: 30919425 gacgcgcactacctgagggggtccatggcggccatctactcgctgctcaagcacgcgtcg 30919366 Query: 362 tgcccggagtcgctcttcttccacttcct 390 |||||||||||| | |||||||||||||| Sbjct: 30919365 tgcccggagtcgatattcttccacttcct 30919337 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 239 gcgccgtccgcggccgcggccggc 262 ||||||||||||||||| |||||| Sbjct: 29014375 gcgccgtccgcggccgccgccggc 29014398 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 ggcggcggcgctgccgaggt 197 |||||||||||||||||||| Sbjct: 24285037 ggcggcggcgctgccgaggt 24285018 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cgccgcaagaatccaagaag 119 |||||||||||||||||||| Sbjct: 8163826 cgccgcaagaatccaagaag 8163845 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 tggccggcgaggcggcggcg 187 |||||||||||||||||||| Sbjct: 7585265 tggccggcgaggcggcggcg 7585284
>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684F11 Length = 147731 Score = 228 bits (115), Expect = 1e-56 Identities = 186/209 (88%), Gaps = 3/209 (1%) Strand = Plus / Minus Query: 182 gcggcgctgccgaggttcgcggaggcgccgcagtaccggaacggggaggggtgcccggcg 241 |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 103119 gcggcgttgccgaggttcgcggaggcgccggagtacaggaacggggaggggtgcccggcg 103060 Query: 242 ccgtccgcggccgcggccggcgtgtgcgacccggggctggtgcacatcgccatgaccctc 301 || | ||| | ||| || |||||||||||||||||||| |||||||| ||||| ||| Sbjct: 103059 gcg---gtggcgggggcgggggtgtgcgacccggggctggtccacatcgcgatgacgctc 103003 Query: 302 gacgcgcactacctgcggggctccatggcggcaatctactcgctgctcaggcacgcctcc 361 ||||||||||||||| |||| ||||||||||| |||||||||||||||| |||||| || Sbjct: 103002 gacgcgcactacctgagggggtccatggcggccatctactcgctgctcaagcacgcgtcg 102943 Query: 362 tgcccggagtcgctcttcttccacttcct 390 |||||||||||| | |||||||||||||| Sbjct: 102942 tgcccggagtcgatattcttccacttcct 102914
>dbj|AK070652.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063C09, full insert sequence Length = 1719 Score = 228 bits (115), Expect = 1e-56 Identities = 186/209 (88%), Gaps = 3/209 (1%) Strand = Plus / Plus Query: 182 gcggcgctgccgaggttcgcggaggcgccgcagtaccggaacggggaggggtgcccggcg 241 |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 252 gcggcgttgccgaggttcgcggaggcgccggagtacaggaacggggaggggtgcccggcg 311 Query: 242 ccgtccgcggccgcggccggcgtgtgcgacccggggctggtgcacatcgccatgaccctc 301 || | ||| | ||| || |||||||||||||||||||| |||||||| ||||| ||| Sbjct: 312 gcg---gtggcgggggcgggggtgtgcgacccggggctggtccacatcgcgatgacgctc 368 Query: 302 gacgcgcactacctgcggggctccatggcggcaatctactcgctgctcaggcacgcctcc 361 ||||||||||||||| |||| ||||||||||| |||||||||||||||| |||||| || Sbjct: 369 gacgcgcactacctgagggggtccatggcggccatctactcgctgctcaagcacgcgtcg 428 Query: 362 tgcccggagtcgctcttcttccacttcct 390 |||||||||||| | |||||||||||||| Sbjct: 429 tgcccggagtcgatattcttccacttcct 457
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 214 bits (108), Expect = 2e-52 Identities = 186/212 (87%) Strand = Plus / Plus Query: 177 aggcggcggcgctgccgaggttcgcggaggcgccgcagtaccggaacggggaggggtgcc 236 ||||||||||||||||||||||||| ||||||||| ||||| |||||||||| ||||| | Sbjct: 7640635 aggcggcggcgctgccgaggttcgctgaggcgccggagtacaggaacggggaagggtgtc 7640694 Query: 237 cggcgccgtccgcggccgcggccggcgtgtgcgacccggggctggtgcacatcgccatga 296 | ||| || | |||| ||||| || ||||| ||| | ||||||||||||||| | |||| Sbjct: 7640695 ccgcggcggcgacggcggcggcgggggtgtgtgacgctgggctggtgcacatctcgatga 7640754 Query: 297 ccctcgacgcgcactacctgcggggctccatggcggcaatctactcgctgctcaggcacg 356 | || ||||||||||||||||| || ||||||||||| | ||||||||||||| ||||| Sbjct: 7640755 cgctggacgcgcactacctgcgcgggtccatggcggcggtgtactcgctgctcaagcacg 7640814 Query: 357 cctcctgcccggagtcgctcttcttccacttc 388 |||||||||||||||||||||||||||||||| Sbjct: 7640815 cctcctgcccggagtcgctcttcttccacttc 7640846 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 cccggcgccgtccgcggccgc 255 ||||||||||||||||||||| Sbjct: 21421424 cccggcgccgtccgcggccgc 21421404 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ccaccaccaccacgcgggac 67 |||||||||||||||||||| Sbjct: 16226239 ccaccaccaccacgcgggac 16226220
>dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1136_C11 Length = 124827 Score = 214 bits (108), Expect = 2e-52 Identities = 186/212 (87%) Strand = Plus / Plus Query: 177 aggcggcggcgctgccgaggttcgcggaggcgccgcagtaccggaacggggaggggtgcc 236 ||||||||||||||||||||||||| ||||||||| ||||| |||||||||| ||||| | Sbjct: 63890 aggcggcggcgctgccgaggttcgctgaggcgccggagtacaggaacggggaagggtgtc 63949 Query: 237 cggcgccgtccgcggccgcggccggcgtgtgcgacccggggctggtgcacatcgccatga 296 | ||| || | |||| ||||| || ||||| ||| | ||||||||||||||| | |||| Sbjct: 63950 ccgcggcggcgacggcggcggcgggggtgtgtgacgctgggctggtgcacatctcgatga 64009 Query: 297 ccctcgacgcgcactacctgcggggctccatggcggcaatctactcgctgctcaggcacg 356 | || ||||||||||||||||| || ||||||||||| | ||||||||||||| ||||| Sbjct: 64010 cgctggacgcgcactacctgcgcgggtccatggcggcggtgtactcgctgctcaagcacg 64069 Query: 357 cctcctgcccggagtcgctcttcttccacttc 388 |||||||||||||||||||||||||||||||| Sbjct: 64070 cctcctgcccggagtcgctcttcttccacttc 64101
>ref|XM_469293.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 353 cacgcctcctgcccggagtcgctcttcttccacttcctcgcc 394 |||||||||||||||||||| || |||||||||||||||| Sbjct: 259 cacgcctcctgcccggagtccgtccacttccacttcctcgcc 300
>gb|AC133335.4| Oryza sativa chromosome 3 BAC OSJNBa0005H05 genomic sequence, complete sequence Length = 55268 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 353 cacgcctcctgcccggagtcgctcttcttccacttcctcgcc 394 |||||||||||||||||||| || |||||||||||||||| Sbjct: 6784 cacgcctcctgcccggagtccgtccacttccacttcctcgcc 6825
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 353 cacgcctcctgcccggagtcgctcttcttccacttcctcgcc 394 |||||||||||||||||||| || |||||||||||||||| Sbjct: 26587066 cacgcctcctgcccggagtccgtccacttccacttcctcgcc 26587107 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ggccggcgaggcggcggcgc 188 |||||||||||||||||||| Sbjct: 26400139 ggccggcgaggcggcggcgc 26400158
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 353 cacgcctcctgcccggagtcgctcttcttccacttcctcgcc 394 |||||||||||||||||||| || |||||||||||||||| Sbjct: 26678389 cacgcctcctgcccggagtccgtccacttccacttcctcgcc 26678430 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ggccggcgaggcggcggcgc 188 |||||||||||||||||||| Sbjct: 26491448 ggccggcgaggcggcggcgc 26491467
>gb|AC079889.20| Oryza sativa chromosome 3 BAC OSJNBa0092M19 genomic sequence, complete sequence Length = 136712 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 353 cacgcctcctgcccggagtcgctcttcttccacttcctcgcc 394 |||||||||||||||||||| || |||||||||||||||| Sbjct: 109880 cacgcctcctgcccggagtccgtccacttccacttcctcgcc 109921
>dbj|AB008466.1| Streptomyces galilaeus aklavinone-aclacinomycin biosynthesis gene cluster, complete cds Length = 25883 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 393 ccgccgcgccgggcgacggcgagc 416 |||||||||||||||||||||||| Sbjct: 4768 ccgccgcgccgggcgacggcgagc 4791
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 404 ggcgacggcgagctgcgcgccgcgctg 430 ||||||||| ||||||||||||||||| Sbjct: 2467731 ggcgacggcaagctgcgcgccgcgctg 2467757 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 cgagctgcgcgccgcgctgg 431 |||||||||||||||||||| Sbjct: 1054065 cgagctgcgcgccgcgctgg 1054084
>gb|AY300024.1| Argopecten purpuratus clone GTT3GT5 microsatellite sequence Length = 733 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 38 catcactgctccaccaccaccac 60 ||||||||||||||||||||||| Sbjct: 412 catcactgctccaccaccaccac 434
>dbj|AP006630.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT12F12, TM0028a, complete sequence Length = 60126 Score = 46.1 bits (23), Expect = 0.097 Identities = 92/115 (80%) Strand = Plus / Minus Query: 284 cacatcgccatgaccctcgacgcgcactacctgcggggctccatggcggcaatctactcg 343 ||||||||||||||||||||| | |||||| || |||||||| || ||| || |||| Sbjct: 54500 cacatcgccatgaccctcgactccggctacctccgcggctccatagccgcagtccactcc 54441 Query: 344 ctgctcaggcacgcctcctgcccggagtcgctcttcttccacttcctcgccgccg 398 | ||| | ||| | ||||||||||| |||||||||||||| ||||||||| Sbjct: 54440 gtcctccgccactcttcctgcccggaaaacgtcttcttccacttcgtcgccgccg 54386
>gb|AC150702.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1356E08, complete sequence Length = 136853 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 235 cccggcgccgtccgcggccgcggccg 260 |||||||||| ||||||||||||||| Sbjct: 115046 cccggcgccgcccgcggccgcggccg 115021
>gb|AC109645.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0410D09, complete sequence Length = 43883 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 235 cccggcgccgtccgcggccgcggccg 260 |||||||||| ||||||||||||||| Sbjct: 23708 cccggcgccgcccgcggccgcggccg 23683
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 235 cccggcgccgtccgcggccgcggccg 260 |||||||||| ||||||||||||||| Sbjct: 18256449 cccggcgccgcccgcggccgcggccg 18256424 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 cccggcgccgtccgcggccgc 255 ||||||||||||||||||||| Sbjct: 6921019 cccggcgccgtccgcggccgc 6921039
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 170 gccggcgaggcggcggcgctgc 191 |||||||||||||||||||||| Sbjct: 5702383 gccggcgaggcggcggcgctgc 5702362 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 ggcgacggcgagctgcgcgc 423 |||||||||||||||||||| Sbjct: 2901280 ggcgacggcgagctgcgcgc 2901299
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 390 tcgccgccgcgccgggcgacgg 411 |||||||||||||||||||||| Sbjct: 428154 tcgccgccgcgccgggcgacgg 428133
>dbj|AB091693.1| Sphingomonas sp. P2 aromatic compounds-catabolic genes extending xylA to ahdA2e, partial and complete cds Length = 13985 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 cttcttcctggccggcgaggcg 181 |||||||||||||||||||||| Sbjct: 10164 cttcttcctggccggcgaggcg 10185
>dbj|AK109915.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-C06, full insert sequence Length = 1961 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 235 cccggcgccgtccgcggccgcggccg 260 |||||||||| ||||||||||||||| Sbjct: 207 cccggcgccgcccgcggccgcggccg 182
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 235 cccggcgccgtccgcggccgcggccg 260 |||||||||| ||||||||||||||| Sbjct: 18415730 cccggcgccgcccgcggccgcggccg 18415705 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 cccggcgccgtccgcggccgc 255 ||||||||||||||||||||| Sbjct: 6987486 cccggcgccgtccgcggccgc 6987506
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 gccggcgaggcggcggcgctg 190 ||||||||||||||||||||| Sbjct: 2462062 gccggcgaggcggcggcgctg 2462042
>gb|BC022138.1| Mus musculus nodal modulator 1, mRNA (cDNA clone IMAGE:5100048) Length = 3988 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 agtcgctcttcttccacttcc 389 ||||||||||||||||||||| Sbjct: 3109 agtcgctcttcttccacttcc 3129
>gb|BC072630.1| Mus musculus nodal modulator 1, mRNA (cDNA clone MGC:99906 IMAGE:6833516), complete cds Length = 4224 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 agtcgctcttcttccacttcc 389 ||||||||||||||||||||| Sbjct: 3339 agtcgctcttcttccacttcc 3359
>gb|BC033923.1| Mus musculus nodal modulator 1, mRNA (cDNA clone MGC:37848 IMAGE:5099899), complete cds Length = 2861 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 agtcgctcttcttccacttcc 389 ||||||||||||||||||||| Sbjct: 1977 agtcgctcttcttccacttcc 1997
>gb|BC025133.1| Mus musculus nodal modulator 1, mRNA (cDNA clone IMAGE:4187384) Length = 2156 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 agtcgctcttcttccacttcc 389 ||||||||||||||||||||| Sbjct: 1272 agtcgctcttcttccacttcc 1292
>gb|BC024503.1| Mus musculus nodal modulator 1, mRNA (cDNA clone IMAGE:4983418), complete cds Length = 1521 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 agtcgctcttcttccacttcc 389 ||||||||||||||||||||| Sbjct: 636 agtcgctcttcttccacttcc 656
>ref|NM_196968.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBb0094K03.5), mRNA Length = 1201 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 ggccggcgaggcggcggcgct 189 ||||||||||||||||||||| Sbjct: 1005 ggccggcgaggcggcggcgct 1025
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 gggtgcccggcgccgtccgcg 250 ||||||||||||||||||||| Sbjct: 2582233 gggtgcccggcgccgtccgcg 2582253
>gb|AC120135.7| Mus musculus chromosome 7, clone RP23-64O4, complete sequence Length = 220872 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 369 agtcgctcttcttccacttcc 389 ||||||||||||||||||||| Sbjct: 162524 agtcgctcttcttccacttcc 162504
>gb|AC136971.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032K12, complete sequence Length = 166936 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 cccggcgccgtccgcggccgc 255 ||||||||||||||||||||| Sbjct: 46277 cccggcgccgtccgcggccgc 46297
>gb|AC115036.10| Mus musculus chromosome 7, clone RP24-274F20, complete sequence Length = 173506 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 369 agtcgctcttcttccacttcc 389 ||||||||||||||||||||| Sbjct: 30282 agtcgctcttcttccacttcc 30262
>ref|NM_153057.2| Mus musculus nodal modulator 1 (Nomo1), mRNA Length = 4130 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 agtcgctcttcttccacttcc 389 ||||||||||||||||||||| Sbjct: 3272 agtcgctcttcttccacttcc 3292
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 398 gcgccgggcgacggcgagctgcgcg 422 |||||||||||||||| |||||||| Sbjct: 195232 gcgccgggcgacggcgtgctgcgcg 195208
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14 Length = 348525 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 398 gcgccgggcgacggcgagctgcgcg 422 |||||||||||||||| |||||||| Sbjct: 42985 gcgccgggcgacggcgtgctgcgcg 43009
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 398 gcgccgggcgacggcgagctgcgcg 422 |||||||||||||||| |||||||| Sbjct: 65640 gcgccgggcgacggcgtgctgcgcg 65616 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 cgagctgcgcgccgcgctgg 431 |||||||||||||||||||| Sbjct: 347345 cgagctgcgcgccgcgctgg 347364
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 392 gccgccgcgccgggcgacggc 412 ||||||||||||||||||||| Sbjct: 223495 gccgccgcgccgggcgacggc 223515
>dbj|AK142338.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430005K07 product:Protein PM5 precursor homolog, full insert sequence Length = 4223 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 agtcgctcttcttccacttcc 389 ||||||||||||||||||||| Sbjct: 3363 agtcgctcttcttccacttcc 3383
>dbj|AK165643.1| Mus musculus RCB-0464 Meth-A cDNA, RIKEN full-length enriched library, clone:G430089F02 product:Protein PM5 precursor homolog [Mus musculus], full insert sequence Length = 4117 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 agtcgctcttcttccacttcc 389 ||||||||||||||||||||| Sbjct: 3257 agtcgctcttcttccacttcc 3277
>dbj|AK166764.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0009K17 product:Similar to pM5 protein, full insert sequence Length = 2264 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 agtcgctcttcttccacttcc 389 ||||||||||||||||||||| Sbjct: 1403 agtcgctcttcttccacttcc 1423
>dbj|AK043279.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730080G08 product:inferred: pM5 protein {Homo sapiens}, full insert sequence Length = 1070 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 agtcgctcttcttccacttcc 389 ||||||||||||||||||||| Sbjct: 210 agtcgctcttcttccacttcc 230
>dbj|AK035957.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630020N16 product:PROTEIN PM5 PRECURSOR homolog [Homo sapiens], full insert sequence Length = 4226 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 agtcgctcttcttccacttcc 389 ||||||||||||||||||||| Sbjct: 3365 agtcgctcttcttccacttcc 3385
>dbj|AK080754.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930101I11 product:Protein PM5 precursor homolog [Mus musculus], full insert sequence Length = 4117 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 agtcgctcttcttccacttcc 389 ||||||||||||||||||||| Sbjct: 3256 agtcgctcttcttccacttcc 3276
>dbj|AK082963.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530025D07 product:PROTEIN PM5 PRECURSOR homolog [Homo sapiens], full insert sequence Length = 4112 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 agtcgctcttcttccacttcc 389 ||||||||||||||||||||| Sbjct: 3252 agtcgctcttcttccacttcc 3272
>dbj|AK030584.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330435A20 product:Pm5 protein homolog [Homo sapiens], full insert sequence Length = 4211 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 agtcgctcttcttccacttcc 389 ||||||||||||||||||||| Sbjct: 3361 agtcgctcttcttccacttcc 3381
>dbj|AK082495.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230056M18 product:PROTEIN PM5 PRECURSOR homolog [Homo sapiens], full insert sequence Length = 4130 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 agtcgctcttcttccacttcc 389 ||||||||||||||||||||| Sbjct: 3272 agtcgctcttcttccacttcc 3292
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 cccggcgccgtccgcggccgc 255 ||||||||||||||||||||| Sbjct: 13980902 cccggcgccgtccgcggccgc 13980922
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 ggccggcgaggcggcggcgct 189 ||||||||||||||||||||| Sbjct: 17032519 ggccggcgaggcggcggcgct 17032539 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 356 gcctcctgcccggagtcgctcttcttccacttcctcgccg 395 ||||||||||||| ||| || ||||||||||||||||| Sbjct: 16076873 gcctcctgcccggggtcagtccacttccacttcctcgccg 16076834 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 388 cctcgccgccgcgccgggcgacggcgag 415 ||||||||||||| ||| |||||||||| Sbjct: 9305215 cctcgccgccgcggcggacgacggcgag 9305188
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 409 cggcgagctgcgcgccgcgct 429 ||||||||||||||||||||| Sbjct: 505965 cggcgagctgcgcgccgcgct 505945
>gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094K03 genomic sequence, complete sequence Length = 135216 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 ggccggcgaggcggcggcgct 189 ||||||||||||||||||||| Sbjct: 73011 ggccggcgaggcggcggcgct 73031
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 415 gctgcgcgccgcgctgggggc 435 ||||||||||||||||||||| Sbjct: 497101 gctgcgcgccgcgctgggggc 497081 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 245 tccgcggccgcggccggcgtgtgc 268 ||||||||||||||||||| |||| Sbjct: 1598785 tccgcggccgcggccggcgggtgc 1598762 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 gagctgcgcgccgcgctggg 432 |||||||||||||||||||| Sbjct: 676741 gagctgcgcgccgcgctggg 676760
>dbj|AK200117.1| Mus musculus cDNA, clone:Y1G0133H07, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000033121, based on BLAT search Length = 121 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 agtcgctcttcttccacttcc 389 ||||||||||||||||||||| Sbjct: 96 agtcgctcttcttccacttcc 116
>dbj|AK190977.1| Mus musculus cDNA, clone:Y1G0104G18, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000033121, based on BLAT search Length = 121 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 agtcgctcttcttccacttcc 389 ||||||||||||||||||||| Sbjct: 96 agtcgctcttcttccacttcc 116
>dbj|AP005456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0513E02 Length = 141477 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 cccggcgccgtccgcggccgc 255 ||||||||||||||||||||| Sbjct: 55924 cccggcgccgtccgcggccgc 55904
>dbj|AK121929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106J23, full insert sequence Length = 1063 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 ggccggcgaggcggcggcgct 189 ||||||||||||||||||||| Sbjct: 867 ggccggcgaggcggcggcgct 887
>gb|AY439015.3| Mycobacterium smegmatis isolate mc2 155 insertion sequence IS1096 TnpA (tnpA) and TnpR genes, complete cds; and GPL gene cluster, complete sequence Length = 67229 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 234 gcccggcgccgtccgcggccgcggc 258 |||||||||||| |||||||||||| Sbjct: 51565 gcccggcgccgtacgcggccgcggc 51589
>gb|AY105952.1| Zea mays PCO068771 mRNA sequence Length = 983 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 236 ccggcgccgtccgcggccgcg 256 ||||||||||||||||||||| Sbjct: 467 ccggcgccgtccgcggccgcg 447
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 404 ggcgacggcgagctgcgcgccgcgc 428 ||||||||||||| ||||||||||| Sbjct: 2851202 ggcgacggcgagcagcgcgccgcgc 2851226
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 ggccggcgaggcggcggcgct 189 ||||||||||||||||||||| Sbjct: 17041559 ggccggcgaggcggcggcgct 17041579 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 356 gcctcctgcccggagtcgctcttcttccacttcctcgccg 395 ||||||||||||| ||| || ||||||||||||||||| Sbjct: 16085114 gcctcctgcccggggtcagtccacttccacttcctcgccg 16085075 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 388 cctcgccgccgcgccgggcgacggcgag 415 ||||||||||||| ||| |||||||||| Sbjct: 9310354 cctcgccgccgcggcggacgacggcgag 9310327
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 cccggcgccgtccgcggccgc 255 ||||||||||||||||||||| Sbjct: 13935182 cccggcgccgtccgcggccgc 13935202
>emb|AL732536.5|CNS08C9B Oryza sativa chromosome 12, . BAC OJ1111_F12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 115351 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 cccggcgccgtccgcggccgc 255 ||||||||||||||||||||| Sbjct: 9578 cccggcgccgtccgcggccgc 9598
>emb|AL928747.3|CNS08CBK Oryza sativa chromosome 12, . BAC OSJNBa0017A21 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144552 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 cccggcgccgtccgcggccgc 255 ||||||||||||||||||||| Sbjct: 117530 cccggcgccgtccgcggccgc 117550
>dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynthetic gene cluster, partial and complete cds Length = 113234 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 393 ccgccgcgccgggcgacggcgagctgcgcgccg 425 ||||||| ||||||| || |||||||||||||| Sbjct: 45891 ccgccgccccgggcgccgacgagctgcgcgccg 45923
>gb|AC079830.9| Oryza sativa chromosome 3 BAC OSJNBb0009F04 genomic sequence, complete sequence Length = 129655 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ggccggcgaggcggcggcgc 188 |||||||||||||||||||| Sbjct: 48179 ggccggcgaggcggcggcgc 48198
>ref|XM_480961.1| Oryza sativa (japonica cultivar-group), mRNA Length = 225 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ggccggcgaggcggcggcgc 188 |||||||||||||||||||| Sbjct: 177 ggccggcgaggcggcggcgc 196
>ref|XM_472403.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 786 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gggtgcccggcgccgtccgcggcc 253 |||||||||||||| ||||||||| Sbjct: 390 gggtgcccggcgccatccgcggcc 367
>ref|XM_467350.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2372 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 239 gcgccgtccgcggccgcggccggc 262 ||||||||||||||||| |||||| Sbjct: 167 gcgccgtccgcggccgccgccggc 190
>ref|XM_466720.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1289 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 ggcggcggcgctgccgaggt 197 |||||||||||||||||||| Sbjct: 636 ggcggcggcgctgccgaggt 617
>gb|DQ214335.1| Taeniopygia guttata clone 0058P0016H07 RAP1B member of RAS oncogene family variant 1-like mRNA, complete sequence Length = 593 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ggccggcgaggcggcggcgc 188 |||||||||||||||||||| Sbjct: 114 ggccggcgaggcggcggcgc 133
>ref|XM_450702.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1563 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 ttcctcgccgccgcgccgggcgacggcg 413 |||| ||||| ||||||||||||||||| Sbjct: 607 ttccccgccggcgcgccgggcgacggcg 634
>ref|NM_196801.1| Oryza sativa (japonica cultivar-group) putative glycosyl transferase (OSJNBb0039C14.14), mRNA Length = 795 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 356 gcctcctgcccggagtcgctcttcttccacttcctcgccg 395 ||||||||||||| ||| || ||||||||||||||||| Sbjct: 100 gcctcctgcccggggtcagtccacttccacttcctcgccg 139
>ref|NM_195831.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0015I18.15), mRNA Length = 645 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 388 cctcgccgccgcgccgggcgacggcgag 415 ||||||||||||| ||| |||||||||| Sbjct: 115 cctcgccgccgcggcggacgacggcgag 88
>ref|XM_469255.1| Oryza sativa (japonica cultivar-group), mRNA Length = 510 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ggccggcgaggcggcggcgc 188 |||||||||||||||||||| Sbjct: 211 ggccggcgaggcggcggcgc 230
>gb|BT018051.1| Zea mays clone EL01N0531F06.c mRNA sequence Length = 755 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 343 gctgctcaggcacgcctcctgccc 366 ||||||| |||||||||||||||| Sbjct: 493 gctgctccggcacgcctcctgccc 516
>gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, complete sequence Length = 142018 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ctgctccaccaccaccacgc 62 |||||||||||||||||||| Sbjct: 55769 ctgctccaccaccaccacgc 55750
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 cgagctgcgcgccgcgctgg 431 |||||||||||||||||||| Sbjct: 108068 cgagctgcgcgccgcgctgg 108087
>gb|AC145271.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1140B01, complete sequence Length = 135184 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 ccggcgccgtccgcggccgc 255 |||||||||||||||||||| Sbjct: 49511 ccggcgccgtccgcggccgc 49492
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ccgcggccgcggccggcgtg 265 |||||||||||||||||||| Sbjct: 1251842 ccgcggccgcggccggcgtg 1251823 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 cgacggcgagctgcgcgccg 425 |||||||||||||||||||| Sbjct: 1194654 cgacggcgagctgcgcgccg 1194635
>ref|XM_420198.1| PREDICTED: Gallus gallus similar to CCG1 (LOC422204), mRNA Length = 4233 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 gcgctgctcttcttcttcct 168 |||||||||||||||||||| Sbjct: 3756 gcgctgctcttcttcttcct 3737
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 ccgcggccgcggccggcgtg 265 |||||||||||||||||||| Sbjct: 2253521 ccgcggccgcggccggcgtg 2253540
>gb|AC084158.2| Caenorhabditis elegans cosmid Y69A2AR, complete sequence Length = 188616 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cactgctccaccaccaccac 60 |||||||||||||||||||| Sbjct: 151176 cactgctccaccaccaccac 151195
>gb|AC133523.3| Mus musculus BAC clone RP23-34E20 from 19, complete sequence Length = 250866 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 catccctccctccatcaccc 29 |||||||||||||||||||| Sbjct: 121236 catccctccctccatcaccc 121217
>emb|CR733247.1| Gallus gallus finished cDNA, clone ChEST869c12 Length = 1659 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 gcgctgctcttcttcttcct 168 |||||||||||||||||||| Sbjct: 1161 gcgctgctcttcttcttcct 1142
>gb|AF257324.1| Streptomyces galilaeus aclacinomycin biosynthesis gene cluster, partial sequence Length = 13533 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 393 ccgccgcgccgggcgacggcgagc 416 |||||||||||||| ||||||||| Sbjct: 526 ccgccgcgccgggccacggcgagc 549
>gb|AY230191.1| Brachiola algerae small subunit ribosomal RNA gene and intergenic spacer region, complete sequence; and large subunit ribosomal RNA gene, partial sequence Length = 1879 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 acgcgggacaactcaccacagcct 82 |||||||||||||||||| ||||| Sbjct: 882 acgcgggacaactcaccagagcct 905
>emb|AL358782.9| Human DNA sequence from clone RP11-574P20 on chromosome 10 Contains part of the RAI17 gene for retinoic acid induced 17, complete sequence Length = 43872 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 gaggggtgcccggcgccgtc 246 |||||||||||||||||||| Sbjct: 8666 gaggggtgcccggcgccgtc 8685
>emb|AL158055.12| Human DNA sequence from clone RP11-348F1 on chromosome Xp11.1-11.22 Contains the NUDT11 gene for nudix (nucleoside diphosphate linked moiety X)-type motif 11, two novel genes, the NUDT10 gene for nudix (nucleoside diphosphate linked moiety X)-type motif 10 and three CpG islands, complete sequence Length = 184873 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 cccgcatcaccatcactgct 47 |||||||||||||||||||| Sbjct: 78899 cccgcatcaccatcactgct 78880
>gb|AY233211.2| Streptomyces griseoflavus strain Goe 3592 gilvocarcin biosynthetic gene cluster, complete sequence Length = 33846 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cccggcgccgtccgcggccg 254 |||||||||||||||||||| Sbjct: 11225 cccggcgccgtccgcggccg 11244
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 cgagctgcgcgccgcgctgg 431 |||||||||||||||||||| Sbjct: 327273 cgagctgcgcgccgcgctgg 327254 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 410 ggcgagctgcgcgccgcgctgggg 433 ||||||||||||||||||| |||| Sbjct: 148081 ggcgagctgcgcgccgcgccgggg 148104
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 cgagctgcgcgccgcgctgg 431 |||||||||||||||||||| Sbjct: 91146 cgagctgcgcgccgcgctgg 91127
>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12 Length = 349028 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 gcgacggcgagctgcgcgccgcgc 428 |||||||||| ||||||||||||| Sbjct: 182605 gcgacggcgaactgcgcgccgcgc 182582
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ccgcggccgcggccggcgtg 265 |||||||||||||||||||| Sbjct: 2121188 ccgcggccgcggccggcgtg 2121169 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 cgacggcgagctgcgcgccg 425 |||||||||||||||||||| Sbjct: 2063647 cgacggcgagctgcgcgccg 2063628
>gb|AY963290.1| Brachiola algerae isolate Undeen small subunit ribosomal RNA gene, partial sequence Length = 1306 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 acgcgggacaactcaccacagcct 82 |||||||||||||||||| ||||| Sbjct: 858 acgcgggacaactcaccagagcct 881
>gb|AY963289.1| Brachiola algerae isolate 404 small subunit ribosomal RNA gene, partial sequence Length = 1291 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 acgcgggacaactcaccacagcct 82 |||||||||||||||||| ||||| Sbjct: 845 acgcgggacaactcaccagagcct 868
>emb|AL731635.3|OSJN00277 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0016B03, complete sequence Length = 125780 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ggccggcgaggcggcggcgc 188 |||||||||||||||||||| Sbjct: 22943 ggccggcgaggcggcggcgc 22962
>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04, complete sequence Length = 143301 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gggtgcccggcgccgtccgcggcc 253 |||||||||||||| ||||||||| Sbjct: 132047 gggtgcccggcgccatccgcggcc 132024
>emb|AL662945.3|OSJN00141 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000126_13, complete sequence Length = 113960 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gggtgcccggcgccgtccgcggcc 253 |||||||||||||| ||||||||| Sbjct: 14834 gggtgcccggcgccatccgcggcc 14811
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 cttcctcgccgccgcgccgg 404 |||||||||||||||||||| Sbjct: 1525902 cttcctcgccgccgcgccgg 1525921
>emb|AJ319869.1|AME319869 Amycolatopsis mediterranei rA gene, kA gene, ORFA, ORFB, ORFC and ORFD Length = 7451 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 cgtccgcggccgcggccggc 262 |||||||||||||||||||| Sbjct: 2444 cgtccgcggccgcggccggc 2425
>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and flanking regions Length = 116831 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 cggcgccgtccgcggccgcggccg 260 ||||||||||| |||||||||||| Sbjct: 4404 cggcgccgtccccggccgcggccg 4427
>emb|AJ277081.1|AME277081 Amycolatopsis mediterranei kA gene for putative histidine kinase Length = 1419 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 cgtccgcggccgcggccggc 262 |||||||||||||||||||| Sbjct: 30 cgtccgcggccgcggccggc 11
>emb|AJ781003.1| Cacao swollen shoot virus complete genome Length = 7297 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 cgctgctcttcttcttcctg 169 |||||||||||||||||||| Sbjct: 6607 cgctgctcttcttcttcctg 6588
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 ggcggcggcgctgccgaggt 197 |||||||||||||||||||| Sbjct: 3692590 ggcggcggcgctgccgaggt 3692609 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cggcgaggcggcggcgctgc 191 |||||||||||||||||||| Sbjct: 1759106 cggcgaggcggcggcgctgc 1759125
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 cgaggcggcggcgctgccga 194 |||||||||||||||||||| Sbjct: 40359 cgaggcggcggcgctgccga 40378
>gb|AC090482.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0015I18, from chromosome 10, complete sequence Length = 161479 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 388 cctcgccgccgcgccgggcgacggcgag 415 ||||||||||||| ||| |||||||||| Sbjct: 61202 cctcgccgccgcggcggacgacggcgag 61229
>gb|DQ399653.1| Nonomuraea longicatena K-252a biosynthesis gene cluster, complete sequence Length = 20300 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 ctggccggcgaggcggcggcgctg 190 |||||||| ||||||||||||||| Sbjct: 4574 ctggccggggaggcggcggcgctg 4551
>gb|AC160646.2| Gallus gallus BAC clone CH261-24P2 from chromosome unknown, complete sequence Length = 212960 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 tggccggcgaggcggcggcg 187 |||||||||||||||||||| Sbjct: 54915 tggccggcgaggcggcggcg 54934
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gcgccgtccgcggccgcggc 258 |||||||||||||||||||| Sbjct: 797743 gcgccgtccgcggccgcggc 797724
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 ccggcgccgtccgcggccgc 255 |||||||||||||||||||| Sbjct: 21128865 ccggcgccgtccgcggccgc 21128884 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gggtgcccggcgccgtccgcggcc 253 |||||||||||||| ||||||||| Sbjct: 20401414 gggtgcccggcgccatccgcggcc 20401391 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ggccggcgaggcggcggcgc 188 |||||||||||||||||||| Sbjct: 2297624 ggccggcgaggcggcggcgc 2297643
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 ccggcgccgtccgcggccgc 255 |||||||||||||||||||| Sbjct: 15260259 ccggcgccgtccgcggccgc 15260278 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 ttcctcgccgccgcgccgggcgacggcg 413 |||| ||||| ||||||||||||||||| Sbjct: 12312542 ttccccgccggcgcgccgggcgacggcg 12312569
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ggccggcgaggcggcggcgc 188 |||||||||||||||||||| Sbjct: 8914687 ggccggcgaggcggcggcgc 8914706
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 ccggcgccgtccgcggccgc 255 |||||||||||||||||||| Sbjct: 5516302 ccggcgccgtccgcggccgc 5516283
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ggccggcgaggcggcggcgc 188 |||||||||||||||||||| Sbjct: 26636252 ggccggcgaggcggcggcgc 26636271
>gb|AC161790.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0011F12, complete sequence Length = 122262 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 388 cctcgccgccgcgccgggcgacggcgag 415 ||||||||||||| ||| |||||||||| Sbjct: 23058 cctcgccgccgcggcggacgacggcgag 23031
>gb|AC087549.2|AC087549 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0039C14, complete sequence Length = 135098 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 356 gcctcctgcccggagtcgctcttcttccacttcctcgccg 395 ||||||||||||| ||| || ||||||||||||||||| Sbjct: 91978 gcctcctgcccggggtcagtccacttccacttcctcgccg 91939
>dbj|AB030621.2| Mus musculus Chetk-alpha gene for choline/ethanolamine kinase-alpha and alternative splicing, complete cds Length = 17266 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 catccctccctccatcaccc 29 |||||||||||||||||||| Sbjct: 8805 catccctccctccatcaccc 8786
>gb|AY894423.1| Anncaliia meligethi small subunit ribosomal RNA gene and intergenic spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence Length = 1876 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 acgcgggacaactcaccacagcct 82 |||||||||||||||||| ||||| Sbjct: 884 acgcgggacaactcaccagagcct 907
>dbj|AP005064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0049G15 Length = 155303 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ggccggcgaggcggcggcgc 188 |||||||||||||||||||| Sbjct: 16349 ggccggcgaggcggcggcgc 16368
>dbj|AP003859.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1033_B09 Length = 120648 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ggccggcgaggcggcggcgc 188 |||||||||||||||||||| Sbjct: 98330 ggccggcgaggcggcggcgc 98349
>dbj|AP003212.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0049H05 Length = 161934 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ggccggcgaggcggcggcgc 188 |||||||||||||||||||| Sbjct: 109966 ggccggcgaggcggcggcgc 109985
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gccggggcagccgtggcgct 153 |||||||||||||||||||| Sbjct: 6521940 gccggggcagccgtggcgct 6521959 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 404 ggcgacggcgagctgcgcgccgcgctgg 431 ||||||| ||| |||||||||||||||| Sbjct: 796286 ggcgacgacgaactgcgcgccgcgctgg 796313
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0503B05 Length = 156814 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cgccgcaagaatccaagaag 119 |||||||||||||||||||| Sbjct: 152019 cgccgcaagaatccaagaag 152038
>dbj|AP004742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0026F02 Length = 132237 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ccaccaccaccacgcgggac 67 |||||||||||||||||||| Sbjct: 51131 ccaccaccaccacgcgggac 51112
>dbj|AP004681.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0040M10 Length = 162790 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ccaccaccaccacgcgggac 67 |||||||||||||||||||| Sbjct: 131032 ccaccaccaccacgcgggac 131013
>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1705_E12 Length = 191416 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 tggccggcgaggcggcggcg 187 |||||||||||||||||||| Sbjct: 178971 tggccggcgaggcggcggcg 178990
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1740_D06 Length = 187410 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 ccggcgccgtccgcggccgc 255 |||||||||||||||||||| Sbjct: 154235 ccggcgccgtccgcggccgc 154254
>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0418B08 Length = 165909 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 ccggcgccgtccgcggccgc 255 |||||||||||||||||||| Sbjct: 39448 ccggcgccgtccgcggccgc 39467
>dbj|AP004030.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_E05 Length = 101333 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 tggccggcgaggcggcggcg 187 |||||||||||||||||||| Sbjct: 2025 tggccggcgaggcggcggcg 2044
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1168F12 Length = 141524 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 386 ttcctcgccgccgcgccgggcgacggcg 413 |||| ||||| ||||||||||||||||| Sbjct: 96096 ttccccgccggcgcgccgggcgacggcg 96123
>dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ2055_H10 Length = 119290 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 ggcggcggcgctgccgaggt 197 |||||||||||||||||||| Sbjct: 85425 ggcggcggcgctgccgaggt 85406
>dbj|AP004747.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0407A09 Length = 103788 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 ggcggcggcgctgccgaggt 197 |||||||||||||||||||| Sbjct: 14575 ggcggcggcgctgccgaggt 14556
>dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0724B10 Length = 169143 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 239 gcgccgtccgcggccgcggccggc 262 ||||||||||||||||| |||||| Sbjct: 60540 gcgccgtccgcggccgccgccggc 60563
>dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1218_D07 Length = 114511 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 239 gcgccgtccgcggccgcggccggc 262 ||||||||||||||||| |||||| Sbjct: 97433 gcgccgtccgcggccgccgccggc 97456
>dbj|AK112070.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-D07, full insert sequence Length = 1289 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 ggcggcggcgctgccgaggt 197 |||||||||||||||||||| Sbjct: 636 ggcggcggcgctgccgaggt 617
>gb|AY037858.1| Cercopithicine herpesvirus 15 strain LCL8664, complete genome Length = 171096 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 163 cttcctggccggcgaggcggcggcgctg 190 |||||||||||||| |||||||| |||| Sbjct: 55623 cttcctggccggcgtggcggcggagctg 55596
>dbj|AK108347.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-B08, full insert sequence Length = 1096 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gggtgcccggcgccgtccgcggcc 253 |||||||||||||| ||||||||| Sbjct: 434 gggtgcccggcgccatccgcggcc 411
>gb|AF069063.1|AF069063 Nosema algerae small subunit ribosomal RNA gene, complete sequence, non-transcribed spacer region, and large subunit ribosomal RNA gene, partial sequence Length = 1878 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 acgcgggacaactcaccacagcct 82 |||||||||||||||||| ||||| Sbjct: 882 acgcgggacaactcaccagagcct 905
>dbj|AK106252.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-E04, full insert sequence Length = 1400 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 356 gcctcctgcccggagtcgctcttcttccacttcctcgccg 395 ||||||||||||| ||| || ||||||||||||||||| Sbjct: 748 gcctcctgcccggggtcagtccacttccacttcctcgccg 709
>dbj|AK069852.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036I06, full insert sequence Length = 1660 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cgccgcaagaatccaagaag 119 |||||||||||||||||||| Sbjct: 69 cgccgcaagaatccaagaag 88
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 tggccggcgaggcggcggcg 187 |||||||||||||||||||| Sbjct: 5576350 tggccggcgaggcggcggcg 5576369
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 cggcgaggcggcggcgctgc 191 |||||||||||||||||||| Sbjct: 1278837 cggcgaggcggcggcgctgc 1278856
>dbj|AK067007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091D15, full insert sequence Length = 2373 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 239 gcgccgtccgcggccgcggccggc 262 ||||||||||||||||| |||||| Sbjct: 167 gcgccgtccgcggccgccgccggc 190
>dbj|AK066173.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055M08, full insert sequence Length = 3551 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ccaccaccaccacgcgggac 67 |||||||||||||||||||| Sbjct: 32 ccaccaccaccacgcgggac 51
>dbj|AB091435.1| Burkholderia multivorans genes for probable lipoprotein transmembrane, 3-isopropylmalate dehydratase large and small subunits, 3-isopropylmalate dehydrogenase oxidoreductase, aspartate-semialdehyde dehydrogenase, probable transmembrane protein, tRNA pseudouridine synthase, N-(5'-phosphoribosyl) anthranilate isomerase, tryptophan synthase beta chain, probable DNA-methyltransferasee, tryptophan synthase alpha chain, acetyl-CoA carboxylase beta subunit, partial and complete cds Length = 12977 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 cgagctgcgcgccgcgctgg 431 |||||||||||||||||||| Sbjct: 12607 cgagctgcgcgccgcgctgg 12626
>gb|AC172026.3| Gallus gallus BAC clone CH261-126J23 from chromosome ul, complete sequence Length = 179661 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 gcgctgctcttcttcttcct 168 |||||||||||||||||||| Sbjct: 123466 gcgctgctcttcttcttcct 123485
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 163 cttcctggccggcgaggcggcggcgctg 190 |||||||||||||| | ||||||||||| Sbjct: 4711658 cttcctggccggcgtgccggcggcgctg 4711631
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 gagctgcgcgccgcgctggg 432 |||||||||||||||||||| Sbjct: 4326923 gagctgcgcgccgcgctggg 4326904 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 409 cggcgagctgcgcgccgcgctgggggcc 436 ||||||||||||||||| |||| ||||| Sbjct: 3928820 cggcgagctgcgcgccgggctgcgggcc 3928793 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 ttcctggccggcgaggcggcggcg 187 ||||||||||||||||||| |||| Sbjct: 1699548 ttcctggccggcgaggcggtggcg 1699525
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 cgagctgcgcgccgcgctgg 431 |||||||||||||||||||| Sbjct: 2426824 cgagctgcgcgccgcgctgg 2426805
>emb|AL731612.3|OSJN00254 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070D17, complete sequence Length = 163376 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ggccggcgaggcggcggcgc 188 |||||||||||||||||||| Sbjct: 122631 ggccggcgaggcggcggcgc 122650
>emb|AL607002.3|OSJN00117 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085H03, complete sequence Length = 132393 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 ccggcgccgtccgcggccgc 255 |||||||||||||||||||| Sbjct: 66251 ccggcgccgtccgcggccgc 66270
>gb|AF024656.1|AF024656 Visvesvaria algerae small subunit ribosomal RNA gene, complete sequence Length = 1366 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 acgcgggacaactcaccacagcct 82 |||||||||||||||||| ||||| Sbjct: 881 acgcgggacaactcaccagagcct 904
>dbj|AB013443.1| Coprinus cinereus eln2 gene for cytochrome P450, complete cds Length = 3300 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 tcttcttccacttcctcgcc 394 |||||||||||||||||||| Sbjct: 1539 tcttcttccacttcctcgcc 1520
>dbj|AB070947.1| Streptomyces avermitilis polyketide-9 biosynthetic gene cluster Length = 24268 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 ggcgacggcgagctgcgcgc 423 |||||||||||||||||||| Sbjct: 16589 ggcgacggcgagctgcgcgc 16570 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,301,750 Number of Sequences: 3902068 Number of extensions: 5301750 Number of successful extensions: 146017 Number of sequences better than 10.0: 155 Number of HSP's better than 10.0 without gapping: 168 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 136042 Number of HSP's gapped (non-prelim): 9975 length of query: 444 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 422 effective length of database: 17,147,199,772 effective search space: 7236118303784 effective search space used: 7236118303784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
