ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast47c04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CDC5_YEAST (P32562) Cell cycle serine/threonine-protein kinase C... 29 6.2
2YSC84_YEAST (P32793) Protein YSC84 (LAS seventeen-binding protei... 28 8.1

>CDC5_YEAST (P32562) Cell cycle serine/threonine-protein kinase CDC5/MSD2 (EC|
           2.7.11.21)
          Length = 705

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 2   YCWLRPLFPPSLPPTVLQLA 61
           Y W R  FPPS+P TV+  A
Sbjct: 334 YVWFRGTFPPSIPSTVMSEA 353



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>YSC84_YEAST (P32793) Protein YSC84 (LAS seventeen-binding protein 4)|
          Length = 468

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = -1

Query: 291 SRNAVDQNTTPDATRLATPP*SSIGRRLRGDDDW-SDGQGREMAAGGVPACAEQGDPG 121
           S ++ D+++T   TR +     S+G R R DDD+  DG GR    G   +  E  D G
Sbjct: 252 SFDSTDESSTRPNTRSSRRRGMSLGSRSRYDDDYDDDGYGRGRGYGDFDSEDEDYDYG 309


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,887,396
Number of Sequences: 219361
Number of extensions: 653889
Number of successful extensions: 2139
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2138
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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