>AGC1_YEAST (Q12482) Mitochondrial aspartate-glutamate transporter AGC1|
           (Aspartate-glutamate carrier 1)
          Length = 902

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 14/44 (31%)
 Frame = +2

Query: 359 LYPIDTIKTRLQAARAGSQIQ--------------WKGLYSGLG 448
           +YPID IKTR+QA R+ +Q +               KGLYSGLG
Sbjct: 548 VYPIDFIKTRMQAQRSLAQYKNSIDCLLKIISREGIKGLYSGLG 591

>PET8_YEAST (P38921) Putative mitochondrial carrier protein PET8|
          Length = 284

 Score = 32.7 bits (73), Expect = 0.43
 Identities = 19/34 (55%), Positives = 22/34 (64%), Gaps = 5/34 (14%)
 Frame = +2

Query: 362 YPIDTIKTRLQA-----ARAGSQIQWKGLYSGLG 448
           +PIDTIKTRLQA     A  G    +KG+Y GLG
Sbjct: 23  FPIDTIKTRLQAKGGFFANGG----YKGIYRGLG 52

>MFRN1_BRARE (Q287T7) Mitoferrin-1 (Mitochondrial iron transporter 1) (Solute|
           carrier family 25 member 37) (Protein frascati)
          Length = 332

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 10/29 (34%), Positives = 21/29 (72%)
 Frame = +2

Query: 359 LYPIDTIKTRLQAARAGSQIQWKGLYSGL 445
           +YP+D++KTR+Q+ +   + Q++ +Y  L
Sbjct: 51  MYPVDSVKTRMQSLQPDPKAQYRSVYGAL 79

>CMC1_DROME (Q9VA73) Calcium-binding mitochondrial carrier Aralar1|
          Length = 695

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = +2

Query: 359 LYPIDTIKTRLQAARAGSQI 418
           +YPID +KTR+Q  RAGS I
Sbjct: 360 VYPIDLVKTRMQNQRAGSYI 379

>AGC1_ASHGO (Q75AH6) Mitochondrial aspartate-glutamate transporter AGC1|
           (Aspartate-glutamate carrier 1)
          Length = 911

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 14/44 (31%)
 Frame = +2

Query: 359 LYPIDTIKTRLQAARAGSQIQ--------------WKGLYSGLG 448
           +YPID +KTR+QA R  S+ +               +GLYSGLG
Sbjct: 541 VYPIDMVKTRMQAQRDFSKYKNSIDCLLKILSKEGVRGLYSGLG 584

>YDE9_SCHPO (Q10442) Putative mitochondrial carrier C12B10.09|
          Length = 345

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
 Frame = +2

Query: 359 LYPIDTIKTRLQAARAGSQIQ---WKGLYSGLG 448
           L+PIDT+KTRLQA   G  ++   + G+Y GLG
Sbjct: 100 LFPIDTLKTRLQA--KGGFVKNGGFHGVYRGLG 130

>CSPG3_RAT (P55067) Neurocan core protein precursor (Chondroitin sulfate|
           proteoglycan 3) (245 kDa early postnatal core
           glycoprotein) [Contains: 150 kDa adult core
           glycoprotein]
          Length = 1257

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 412 TSSSSSLKPGLDGVDGVERRLHHDP 338
           T S+  LKPG D   GV+  +HH P
Sbjct: 576 TDSTPGLKPGADEAPGVKSAIHHPP 600

>MFRN1_HUMAN (Q9NYZ2) Mitoferrin-1 (Mitochondrial iron transporter 1) (Solute|
           carrier family 25 member 37) (Mitochondria solute
           carrier protein)
          Length = 347

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +2

Query: 359 LYPIDTIKTRLQAARAGSQIQWKGLYSGL 445
           +YP+D++KTR+Q+     + Q+  +Y  L
Sbjct: 63  MYPVDSVKTRMQSLSPDPKAQYTSIYGAL 91

>PET8_ASHGO (O60029) Putative mitochondrial carrier protein PET8|
          Length = 271

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
 Frame = +2

Query: 362 YPIDTIKTRLQAARAG--SQIQWKGLYSGLG 448
           +PIDT+KTRLQ A+ G      ++G+Y GLG
Sbjct: 24  FPIDTLKTRLQ-AKGGFFHNGGYRGIYRGLG 53

>DYN2_HUMAN (P50570) Dynamin-2 (EC 3.6.5.5)|
          Length = 870

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
 Frame = +2

Query: 119 AQASFFYPPDPARGGSRAVSCGSSFLP----LPSRP 214
           A ASF  PP P+R G ++V   S   P    +PSRP
Sbjct: 800 AAASFSAPPIPSRPGPQSVFANSDLFPAPPQIPSRP 835

>MFRN1_RAT (Q66H23) Mitoferrin-1 (Mitochondrial iron transporter 1) (Solute|
           carrier family 25 member 37)
          Length = 338

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = +2

Query: 359 LYPIDTIKTRLQAARAGSQIQWKGLYSGL 445
           +YP+D++KTR+Q+     + ++  +Y  L
Sbjct: 63  MYPVDSVKTRMQSLNPDPKARYTSIYGAL 91

>MFRN1_MOUSE (Q920G8) Mitoferrin-1 (Mitochondrial iron transporter 1) (Solute|
           carrier family 25 member 37) (Mitochondria solute
           carrier protein)
          Length = 338

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = +2

Query: 359 LYPIDTIKTRLQAARAGSQIQWKGLYSGL 445
           +YP+D++KTR+Q+     + ++  +Y  L
Sbjct: 63  MYPVDSVKTRMQSLNPDPKARYTSIYGAL 91


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,323,595
Number of Sequences: 219361
Number of extensions: 471824
Number of successful extensions: 1647
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1646
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)