>CCDC4_HUMAN (Q6ZU67) Coiled-coil domain-containing protein 4|
          Length = 530

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = +1

Query: 19  PIPHPPYDPRRAQKILVAILSSSHPGEE---EASRSPEKGRSSPRISSLREICTERAGEG 189
           P P PP+ P  A    V+I SS  P ++   ++S  P  GR++   SS    CT    +G
Sbjct: 52  PPPPPPFAPHAA----VSISSSEPPPQQFQAQSSYPPGPGRAAAAASSSSPSCTPATSQG 107

Query: 190 SI 195
            +
Sbjct: 108 HL 109

>FBRL_NEUCR (Q9HE26) Fibrillarin|
          Length = 323

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 15/25 (60%), Positives = 15/25 (60%)
 Frame = -1

Query: 153 GGDPRGRAPLLGGSRGFFFPGVGGG 79
           GGD  GR    GGSRG F  G GGG
Sbjct: 20  GGDRGGRGGARGGSRGGFGGGRGGG 44

>MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor|
           (Mu-protocadherin)
          Length = 845

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
 Frame = +1

Query: 7   NWSAPIPHPPYDPRRAQKILVAILSSSHPGEEEASRSPE---KGRSSPRISSLREICT-E 174
           NW AP+P P +DP+ A+  + A    + PG      +PE     R+    +++R I T E
Sbjct: 725 NW-APVPSPTHDPKPAEAPMPA--EPAPPGPASPGGAPEPPAAARAGGSPTAVRSILTKE 781

Query: 175 RAGEG 189
           R  EG
Sbjct: 782 RRPEG 786


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,876,311
Number of Sequences: 219361
Number of extensions: 614961
Number of successful extensions: 2114
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2111
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)