| Clone Name | bast47b06 |
|---|---|
| Clone Library Name | barley_pub |
>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein| Length = 346 Score = 33.5 bits (75), Expect = 0.14 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = +1 Query: 256 HLPRPPVVGPPKGHLPRPPVV 318 H P+PP+V PP H+PRPP+V Sbjct: 98 HGPKPPIVKPP--HVPRPPIV 116 Score = 27.3 bits (59), Expect = 9.9 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +1 Query: 259 LPRPPVVGPPKGHLPRPPVV 318 +P PP+V PP +P PPVV Sbjct: 201 IPTPPIVSPP--FVPNPPVV 218
>TCRG1_MOUSE (Q8CGF7) Transcription elongation regulator 1 (TATA box-binding| protein-associated factor 2S) (Transcription factor CA150) (p144) (Formin-binding protein 28) (FBP 28) Length = 1100 Score = 30.0 bits (66), Expect = 1.5 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +1 Query: 256 HLPRPPVVGPPKGHLPRPP 312 HL RPP + PP G +P PP Sbjct: 93 HLQRPPFMPPPMGAMPPPP 111
>TMC2_HUMAN (Q8TDI7) Transmembrane cochlear-expressed protein 2| Length = 906 Score = 28.9 bits (63), Expect = 3.4 Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 2/19 (10%) Frame = +1 Query: 253 GHLP--RPPVVGPPKGHLP 303 GHLP RPP +GP GH P Sbjct: 869 GHLPISRPPGIGPDSGHAP 887
>TCRG1_HUMAN (O14776) Transcription elongation regulator 1 (TATA box-binding| protein-associated factor 2S) (Transcription factor CA150) Length = 1098 Score = 28.1 bits (61), Expect = 5.8 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +1 Query: 256 HLPRPPVVGPPKGHLPRPP 312 HL RPP + PP +P PP Sbjct: 93 HLQRPPFMPPPMSSMPPPP 111
>POXM_DROME (P23757) Paired box pox-meso protein (Paired box mesodermal| protein) Length = 402 Score = 27.7 bits (60), Expect = 7.5 Identities = 11/15 (73%), Positives = 12/15 (80%) Frame = +1 Query: 16 PVHHHYHQLAAMAAS 60 P HHH+HQ AA AAS Sbjct: 223 PHHHHHHQSAAAAAS 237
>GLU2_MAIZE (P04706) Glutelin-2 precursor (Zein-gamma) (27 kDa zein)| (Alcohol-soluble reduced glutelin) (ASG) (Zein ZC2) Length = 223 Score = 27.7 bits (60), Expect = 7.5 Identities = 13/19 (68%), Positives = 13/19 (68%) Frame = +1 Query: 256 HLPRPPVVGPPKGHLPRPP 312 HLP PPV PP HLP PP Sbjct: 65 HLP-PPVHVPPPVHLPPPP 82
>WASP_HUMAN (P42768) Wiskott-Aldrich syndrome protein (WASp)| Length = 501 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/20 (65%), Positives = 14/20 (70%), Gaps = 1/20 (5%) Frame = +1 Query: 259 LPRPPVVGPPKGHL-PRPPV 315 LPRPP+VG KG P PPV Sbjct: 325 LPRPPIVGGNKGRSGPLPPV 344 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.137 0.460 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,945,437 Number of Sequences: 219361 Number of extensions: 158426 Number of successful extensions: 1165 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 948 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1153 length of database: 80,573,946 effective HSP length: 82 effective length of database: 62,586,344 effective search space used: 1502072256 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)