ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast47b03 |
|---|---|
| Clone Library Name | barley_pub |
>FXL17_MOUSE (Q9QZN1) F-box/LRR-repeat protein 17 (F-box and leucine-rich repeat| protein 17) (F-box only protein 13) (Fragment) Length = 462 Score = 56.6 bits (135), Expect = 3e-08 Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 1/150 (0%) Frame = +1 Query: 10 QRLPESPSQIGMASPPPSPPDWAGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGE 189 Q PE+P PPP PD LP LL +F L E + A +VC+ W R + Sbjct: 62 QEPPENPCDCHR-EPPPEIPDINQLPPSILLKIFSNLSLNERCLSASLVCKYW-RDLCLD 119 Query: 190 PDLWRRVDLSDCFDPTIDMVAMACAAVDRADGRLEHFAADC-FVTDALLFYMAKRTNGLK 366 W+++DLS T +++ + R+ +E +DC ++D+ + +A + GL Sbjct: 120 FQFWKQLDLSSRQQVTDELLEKIAS---RSQNIIEINISDCRSLSDSGVCVLAFKCPGLL 176 Query: 367 SLRLVNCMKVSDKGLVALGKRSPHLEELEL 456 C ++SD ++A+ P L+++ + Sbjct: 177 RYTAYRCKQLSDTSIIAVASHCPLLQKVHV 206
>YKK7_CAEEL (P34284) Hypothetical F-box/LRR-repeat protein C02F5.7| Length = 466 Score = 44.7 bits (104), Expect = 1e-04 Identities = 40/154 (25%), Positives = 61/154 (39%), Gaps = 26/154 (16%) Frame = +1 Query: 82 LPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDL----SDCFDPTIDMV 249 LP + LL VF L + L + VCR+W +A + W+RVDL D ++ + Sbjct: 60 LPKEVLLKVFSFLDT-KALCRSAQVCRSWSILALDGSN-WQRVDLFTFQRDVKTAVVENL 117 Query: 250 AMACAAVDRA----------DGRLEHFAADCFVTDALLFYMAKRTNG------------L 363 A C + D L F + C + L Y KR L Sbjct: 118 ARRCGGFLKELSLKGCENVHDSALRTFTSRCPNLEHLSLYRCKRVTDASCENLGRYCHKL 177 Query: 364 KSLRLVNCMKVSDKGLVALGKRSPHLEELELTTC 465 L L NC ++D+ + +G P+L L ++ C Sbjct: 178 NYLNLENCSSITDRAMKYIGDGCPNLSYLNISWC 211 Score = 40.0 bits (92), Expect = 0.003 Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%) Frame = +1 Query: 310 CF-VTDALLFYMAKRTNGLKSLRLVNCMKVSDKGLVALGKRSPHLEELELTTC 465 CF +TD + +A L+ L + NC ++SD+ LV+LG+ S +L+ LEL+ C Sbjct: 263 CFQLTDITVQNIANGATALEYLCMSNCNQISDRSLVSLGQHSHNLKVLELSGC 315
>SKP2_HUMAN (Q13309) S-phase kinase-associated protein 2 (F-box protein Skp2)| (Cyclin A/CDK2-associated protein p45) (p45skp2) (F-box/LRR-repeat protein 1) Length = 424 Score = 43.9 bits (102), Expect = 2e-04 Identities = 22/49 (44%), Positives = 32/49 (65%) Frame = +1 Query: 73 WAGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDLS 219 W LPD+ LL +F L PE+L +G VC+ W R+A+ E LW+ +DL+ Sbjct: 97 WDSLPDELLLGIFSCLCLPELLKVSG-VCKRWYRLASDE-SLWQTLDLT 143
>SKP2_MOUSE (Q9Z0Z3) S-phase kinase-associated protein 2 (F-box protein Skp2)| (Cyclin A/CDK2-associated protein p45) (F-box/WD-40 protein 1) (FWD1) Length = 424 Score = 42.0 bits (97), Expect = 8e-04 Identities = 21/49 (42%), Positives = 31/49 (63%) Frame = +1 Query: 73 WAGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDLS 219 W LPD+ LL +F L PE+L +G VC+ W R++ E LW+ +DL+ Sbjct: 97 WDSLPDELLLGIFSCLCLPELLRVSG-VCKRWYRLSLDE-SLWQSLDLA 143
>FXL16_RAT (Q5MJ12) F-box/LRR-repeat protein 16 (F-box and leucine-rich repeat| protein 16) (Spinal cord injury and regeneration-related protein 1) Length = 479 Score = 38.5 bits (88), Expect = 0.009 Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 2/88 (2%) Frame = +1 Query: 208 VDLSDCFDPTIDMVAMACAAVDRADGRLEHFAADCF-VTD-ALLFYMAKRTNGLKSLRLV 381 + +SDC + D A AA+ + L + + VTD AL ++ A++ + +LRL+ Sbjct: 247 LSVSDCINVADD----AIAAISQLLPNLAELSLQAYHVTDTALAYFTARQGHSTHTLRLL 302 Query: 382 NCMKVSDKGLVALGKRSPHLEELELTTC 465 +C ++++ G+V + P+L L L+ C Sbjct: 303 SCWEITNHGVVNVVHSLPNLTSLSLSGC 330 Score = 29.3 bits (64), Expect = 5.2 Identities = 39/114 (34%), Positives = 49/114 (42%), Gaps = 26/114 (22%) Frame = +1 Query: 202 RRVDLSDCFDPTIDMVAMACAAVDRADGRLEHFAAD-CF-VTDALLFYMAKRTNGLKSLR 375 R +DLS C P I +A+ A D RLE D C +TD L Y++ ++ L+SL Sbjct: 349 RSLDLSWC--PRITDMALEYVACDLH--RLEELVLDRCVRITDTGLSYLSTMSS-LRSLY 403 Query: 376 LVNCMKVSDKGLV-ALGKRS-----------------------PHLEELELTTC 465 L C +V D GL L RS LEELELT C Sbjct: 404 LRWCCQVQDFGLKHLLAMRSLRLLSLAGCPLLTTTGLSGLVQLQELEELELTNC 457
>FBX37_MOUSE (Q91W61) F-box only protein 37 (F-box/LRR-repeat protein 15)| Length = 296 Score = 38.1 bits (87), Expect = 0.011 Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 7/135 (5%) Frame = +1 Query: 82 LPDDALLTVFGRLGAPEV----LMGAGVVCRNWL-RVATGEPDLWRRVDLSDCFDPTIDM 246 L D+ L+ V R P++ L G G + R L +A G P L +R+ L+ C +D Sbjct: 97 LSDEDLVPVLAR--NPQLRSVALAGCGQLSRRALGALAEGCPRL-QRLSLAHC--DWVDG 151 Query: 247 VAMACAAVDRADGRLEHFAADCF-VTDALLFYMAKRTN-GLKSLRLVNCMKVSDKGLVAL 420 +A+ A DR E C + D + Y+A+R GL+SL L V D + L Sbjct: 152 LALRGLA-DRCPALEELDLTACRQLKDEAIVYLAQRRGAGLRSLSLAVNANVGDTAVQEL 210 Query: 421 GKRSPHLEELELTTC 465 + P LE L+LT C Sbjct: 211 ARNCPQLEHLDLTGC 225
>FXL16_HUMAN (Q8N461) F-box/LRR-repeat protein 16 (F-box and leucine-rich repeat| protein 16) Length = 479 Score = 38.1 bits (87), Expect = 0.011 Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 2/88 (2%) Frame = +1 Query: 208 VDLSDCFDPTIDMVAMACAAVDRADGRLEHFAADCF-VTD-ALLFYMAKRTNGLKSLRLV 381 + +SDC + D A AA+ + L + + VTD AL ++ A++ + +LRL+ Sbjct: 247 LSVSDCINVADD----AIAAISQLLPNLAELSLQAYHVTDTALAYFTARQGHSTHTLRLL 302 Query: 382 NCMKVSDKGLVALGKRSPHLEELELTTC 465 +C ++++ G+V + P+L L L+ C Sbjct: 303 SCWEITNHGVVNVVHSLPNLTALSLSGC 330 Score = 31.2 bits (69), Expect = 1.4 Identities = 41/114 (35%), Positives = 52/114 (45%), Gaps = 26/114 (22%) Frame = +1 Query: 202 RRVDLSDCFDPTIDMVAMACAAVDRADGRLEHFAAD-CF-VTDALLFYMAKRTNGLKSLR 375 R +DLS C P I +A+ A D RLE D C +TD L Y++ ++ L+SL Sbjct: 349 RSLDLSWC--PRITDMALEYVACDLH--RLEELVLDRCVRITDTGLSYLSTMSS-LRSLY 403 Query: 376 LVNCMKVSDKGL---VALGKR---SP------------------HLEELELTTC 465 L C +V D GL +ALG SP LEELELT C Sbjct: 404 LRWCCQVQDFGLKHLLALGSLRLLSPAGCPLLTTTGLSGLVQLQELEELELTNC 457
>FXL14_MOUSE (Q8BID8) F-box/LRR-repeat protein 14 (F-box and leucine-rich repeat| protein 14) Length = 400 Score = 36.6 bits (83), Expect = 0.033 Identities = 16/62 (25%), Positives = 33/62 (53%) Frame = +1 Query: 280 DGRLEHFAADCFVTDALLFYMAKRTNGLKSLRLVNCMKVSDKGLVALGKRSPHLEELELT 459 DG C ++D + M ++ +GL++L + C++++DKGL + + L ++L Sbjct: 305 DGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLY 364 Query: 460 TC 465 C Sbjct: 365 GC 366 Score = 30.8 bits (68), Expect = 1.8 Identities = 18/50 (36%), Positives = 28/50 (56%) Frame = +1 Query: 316 VTDALLFYMAKRTNGLKSLRLVNCMKVSDKGLVALGKRSPHLEELELTTC 465 V D L Y+A+ +GLKSL L +C +SD G+ + ++ L L + C Sbjct: 292 VGDQSLAYIAQGLDGLKSLSLCSC-HISDDGINRMVRQMHGLRTLNIGQC 340 Score = 28.5 bits (62), Expect = 8.9 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = +1 Query: 244 MVAMACAAVDRADGRLEHFAADCF-VTDALLFYMAKRTNGLKSLRLVNCMKVSDKGLVAL 420 + M +A + G + DC +TD L ++++ GL+ L L C +SD GL+ L Sbjct: 190 LAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHL 249 Query: 421 GKRSPHLEELELTTC 465 L L L +C Sbjct: 250 SHMG-SLRSLNLRSC 263
>FXL14_HUMAN (Q8N1E6) F-box/LRR-repeat protein 14 (F-box and leucine-rich repeat| protein 14) Length = 418 Score = 36.6 bits (83), Expect = 0.033 Identities = 16/62 (25%), Positives = 33/62 (53%) Frame = +1 Query: 280 DGRLEHFAADCFVTDALLFYMAKRTNGLKSLRLVNCMKVSDKGLVALGKRSPHLEELELT 459 DG C ++D + M ++ +GL++L + C++++DKGL + + L ++L Sbjct: 305 DGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLY 364 Query: 460 TC 465 C Sbjct: 365 GC 366 Score = 30.8 bits (68), Expect = 1.8 Identities = 18/50 (36%), Positives = 28/50 (56%) Frame = +1 Query: 316 VTDALLFYMAKRTNGLKSLRLVNCMKVSDKGLVALGKRSPHLEELELTTC 465 V D L Y+A+ +GLKSL L +C +SD G+ + ++ L L + C Sbjct: 292 VGDQSLAYIAQGLDGLKSLSLCSC-HISDDGINRMVRQMHGLRTLNIGQC 340 Score = 28.5 bits (62), Expect = 8.9 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = +1 Query: 244 MVAMACAAVDRADGRLEHFAADCF-VTDALLFYMAKRTNGLKSLRLVNCMKVSDKGLVAL 420 + M +A + G + DC +TD L ++++ GL+ L L C +SD GL+ L Sbjct: 190 LAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHL 249 Query: 421 GKRSPHLEELELTTC 465 L L L +C Sbjct: 250 SHMG-SLRSLNLRSC 263
>POF2_SCHPO (O74783) F-box/LRR-repeat protein 2 (F-box and leucine-rich repeat| protein 2) (F-box protein pof2) Length = 463 Score = 36.2 bits (82), Expect = 0.043 Identities = 17/46 (36%), Positives = 26/46 (56%) Frame = +1 Query: 328 LLFYMAKRTNGLKSLRLVNCMKVSDKGLVALGKRSPHLEELELTTC 465 +L Y++ LK+L + NC V D G+V + KR P+L L + C Sbjct: 137 ILEYISDNCPNLKALNIGNCGLVEDTGMVQIIKRCPYLNRLIIPNC 182
>FBXL2_HUMAN (Q9UKC9) F-box/LRR-repeat protein 2 (F-box and leucine-rich repeat| protein 2) (F-box protein FBL2/FBL3) Length = 423 Score = 35.8 bits (81), Expect = 0.056 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 3/131 (2%) Frame = +1 Query: 82 LPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDLSDCFDPTIDMVAMAC 261 LP + LL +F L L + + W +A + W+R+DL F+ ID+ Sbjct: 15 LPKELLLRIFSFLDIV-TLCRCAQISKAWNILALDGSN-WQRIDL---FNFQIDVEGRVV 69 Query: 262 AAVD-RADGRLEHFAA-DCF-VTDALLFYMAKRTNGLKSLRLVNCMKVSDKGLVALGKRS 432 + R G L + C V D+ L A+ ++ L L C K++D +L + Sbjct: 70 ENISKRCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFC 129 Query: 433 PHLEELELTTC 465 L+ L+LT+C Sbjct: 130 SKLKHLDLTSC 140 Score = 32.3 bits (72), Expect = 0.62 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +1 Query: 316 VTDALLFYMAKRTNGLKSLRLVNCMKVSDKGLVALGKRSPHLEELELTTC 465 +TD + + + + L++L L C ++D L ALG P L+ LE C Sbjct: 221 ITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARC 270
>FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leucine-rich repeat| protein 7) (F-box protein FBL6/FBL7) Length = 491 Score = 35.8 bits (81), Expect = 0.056 Identities = 20/50 (40%), Positives = 27/50 (54%) Frame = +1 Query: 316 VTDALLFYMAKRTNGLKSLRLVNCMKVSDKGLVALGKRSPHLEELELTTC 465 +TD + Y+AK LKSL + C VSD GL L +L+ L L +C Sbjct: 389 ITDHGVEYLAKNCTKLKSLDIGKCPLVSDTGLECLALNCFNLKRLSLKSC 438 Score = 32.7 bits (73), Expect = 0.47 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 5/93 (5%) Frame = +1 Query: 202 RRVDLSDCF---DPTIDMVAMACAAVDRADGRLEH-FAADCF-VTDALLFYMAKRTNGLK 366 R +D++DCF D + +A C +L H + C +TD L Y+ +K Sbjct: 275 RYLDMTDCFVLEDEGLHTIAAHCT-------QLTHLYLRRCVRLTDEGLRYLVIYCASIK 327 Query: 367 SLRLVNCMKVSDKGLVALGKRSPHLEELELTTC 465 L + +C VSD GL + K L L + C Sbjct: 328 ELSVSDCRFVSDFGLREIAKLESRLRYLSIAHC 360 Score = 31.6 bits (70), Expect = 1.1 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Frame = +1 Query: 268 VDRADGRLEHFA-ADCF-VTDALLFYMAKRTNGLKSLRLVNCMKVSDKGLVALGKRSPHL 441 + + + RL + + A C VTD + Y+AK + L+ L C ++D G+ L K L Sbjct: 345 IAKLESRLRYLSIAHCGRVTDVGIRYVAKYCSKLRYLNARGCEGITDHGVEYLAKNCTKL 404 Query: 442 EELELTTC 465 + L++ C Sbjct: 405 KSLDIGKC 412
>GRR1_YEAST (P24814) Ubiquitin ligase complex F-box protein GRR1| Length = 1151 Score = 35.8 bits (81), Expect = 0.056 Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 4/102 (3%) Frame = +1 Query: 172 RVATGEPDLWRRVDLSDC---FDPTIDMVAMACAAVDRADGRLEHFAADCF-VTDALLFY 339 +V P L R +DLS C D TI+ + V+ A F C +TDA LF Sbjct: 567 KVVDDMPSL-RLIDLSGCENITDKTIESI------VNLAPKLRNVFLGKCSRITDASLFQ 619 Query: 340 MAKRTNGLKSLRLVNCMKVSDKGLVALGKRSPHLEELELTTC 465 ++K L+++ +C ++D G+ AL ++ ++ C Sbjct: 620 LSKLGKNLQTVHFGHCFNITDNGVRALFHSCTRIQYVDFACC 661 Score = 30.0 bits (66), Expect = 3.1 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 6/92 (6%) Frame = +1 Query: 208 VDLSDCFDPTIDMVAM---ACAAVDRADGRLEHFAADCFVTDALLFYMAKRTNGLKSLRL 378 V CF+ T + V +C + D FA +T+ L+ +A LK + L Sbjct: 630 VHFGHCFNITDNGVRALFHSCTRIQYVD-----FACCTNLTNRTLYELADLPK-LKRIGL 683 Query: 379 VNCMKVSDKGL---VALGKRSPHLEELELTTC 465 V C +++D+GL V+L R+ LE + L+ C Sbjct: 684 VKCTQMTDEGLLNMVSLRGRNDTLERVHLSYC 715
>FBX37_HUMAN (Q9H469) F-box only protein 37 (F-box/LRR-repeat protein 15)| Length = 296 Score = 35.4 bits (80), Expect = 0.073 Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 7/135 (5%) Frame = +1 Query: 82 LPDDALLTVFGRLGAPEV----LMGAGVVCRNWL-RVATGEPDLWRRVDLSDCFDPTIDM 246 L D+ L+ V R P++ L G G + R L +A G P L +R+ L+ C +D Sbjct: 97 LSDEDLVPVLAR--NPQLRSVALGGCGQLSRRALGALAEGCPRL-QRLSLAHC--DWVDG 151 Query: 247 VAMACAAVDRADGRLEHFAADCF-VTDALLFYMAKRTN-GLKSLRLVNCMKVSDKGLVAL 420 +A+ A DR E C + D + Y+A+R GL+SL L V D + L Sbjct: 152 LALRGLA-DRCPALEELDLTACRQLKDEAIVYLAQRRGAGLRSLSLAVNANVGDAAVQEL 210 Query: 421 GKRSPHLEELELTTC 465 + P L L+LT C Sbjct: 211 ARNCPELHHLDLTGC 225
>FBXL2_MOUSE (Q8BH16) F-box/LRR-repeat protein 2 (F-box and leucine-rich repeat| protein 2) Length = 423 Score = 34.7 bits (78), Expect = 0.12 Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 5/133 (3%) Frame = +1 Query: 82 LPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDL----SDCFDPTIDMV 249 LP + LL +F L L + + W +A + W+RVDL +D ++ + Sbjct: 15 LPKELLLRIFSFLDIV-TLCRCAQISKAWNILALDGSN-WQRVDLFNFQTDVEGRVVENI 72 Query: 250 AMACAAVDRADGRLEHFAADCF-VTDALLFYMAKRTNGLKSLRLVNCMKVSDKGLVALGK 426 + C R + C V D+ L A+ ++ L L C K++D +L + Sbjct: 73 SKRCGGFLR-----KLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSR 127 Query: 427 RSPHLEELELTTC 465 L+ L+LT+C Sbjct: 128 FCSKLKHLDLTSC 140 Score = 32.3 bits (72), Expect = 0.62 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +1 Query: 316 VTDALLFYMAKRTNGLKSLRLVNCMKVSDKGLVALGKRSPHLEELELTTC 465 +TD + + + + L++L L C ++D L ALG P L+ LE C Sbjct: 221 ITDDGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQVLEAARC 270
>MAF_MOUSE (P54843) Transcription factor Maf (Proto-oncogene c-maf)| Length = 370 Score = 34.3 bits (77), Expect = 0.16 Identities = 19/48 (39%), Positives = 22/48 (45%) Frame = -2 Query: 155 TTPAPMSTSGAPRRPNTVRRASSGRPAQSGGDGGGDAMPIWLGLSGSL 12 T AP + GA N A G PA +GG GGGD G G+L Sbjct: 196 TAGAPGTAGGASSSSNGAGGAGGGGPANTGGGGGGDGGGGTAGAGGAL 243
>FBX6_MOUSE (Q9QZN4) F-box only protein 6 (F-box only protein 6b)| Length = 295 Score = 33.9 bits (76), Expect = 0.21 Identities = 18/49 (36%), Positives = 27/49 (55%) Frame = +1 Query: 82 LPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDLSDCF 228 LP++ LL +F + AP++L +VCR W R LW+R L + F Sbjct: 7 LPENILLELFIHIPAPQLLRNCRLVCRLW-RDLIDVVSLWKRKSLREGF 54
>FBXL3_MOUSE (Q8C4V4) F-box/LRR-repeat protein 3 (F-box/LRR-repeat protein 3A)| (F-box and leucine-rich repeat protein 3A) Length = 428 Score = 33.9 bits (76), Expect = 0.21 Identities = 23/61 (37%), Positives = 27/61 (44%) Frame = +1 Query: 22 ESPSQIGMASPPPSPPDWAGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLW 201 E P + P DW L D +L VF L + A VCRNW +V PDLW Sbjct: 19 EKPKRPRTTQERSQPCDWGNLLQDIVLHVFKYLPLLD-RAHASQVCRNWNQV-FHMPDLW 76 Query: 202 R 204 R Sbjct: 77 R 77
>FXL13_MOUSE (Q8CDU4) F-box/LRR-repeat protein 13 (F-box and leucine-rich repeat| protein 13) Length = 790 Score = 33.5 bits (75), Expect = 0.28 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 2/90 (2%) Frame = +1 Query: 202 RRVDLSDCFDPTIDMVAMACAAVDRADGRLEHFAADCF--VTDALLFYMAKRTNGLKSLR 375 R V +SDC + T + C + LEH +TD ++ +A + SL Sbjct: 608 REVSVSDCVNITDFGIRAYC----KTSLLLEHLDVSYCSQLTDDIIKTIAIFCTRITSLN 663 Query: 376 LVNCMKVSDKGLVALGKRSPHLEELELTTC 465 + C K++D G+ L R +L L+++ C Sbjct: 664 IAGCPKITDAGMEILSARCHYLHILDISGC 693 Score = 32.0 bits (71), Expect = 0.81 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +1 Query: 361 LKSLRLVNCMKVSDKGLVALGKRSPHLEELELTTC 465 L+ L L NC + D ++ L +R P+L L L C Sbjct: 532 LRELNLTNCSLLGDSSVIRLSERCPNLHYLNLRNC 566
>LRC29_HUMAN (Q8WV35) Leucine-rich repeat-containing protein 29| (F-box/LRR-repeat protein 9) (F-box and leucine-rich repeat protein 9) (F-box protein FBL9) Length = 223 Score = 33.5 bits (75), Expect = 0.28 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +1 Query: 316 VTDALLFYMAKRTNGLKSLRLVNCMKVSDKGLVALGKRSPHLEELELTTC 465 +TD L +A+ L+ L L +C ++SDKG P L+ L L++C Sbjct: 113 LTDNGLVAVARGCPSLEHLALSHCSRLSDKGWAQAASSWPRLQHLNLSSC 162 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +1 Query: 361 LKSLRLVNCMKVSDKGLVALGKRSPHLEELELTTC 465 L+ L L +++D GLVA+ + P LE L L+ C Sbjct: 102 LRQLSLSLLPELTDNGLVAVARGCPSLEHLALSHC 136
>JHD1_DROME (Q9VHH9) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 1345 Score = 33.5 bits (75), Expect = 0.28 Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 1/101 (0%) Frame = +1 Query: 88 DDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDLSDCFDPTIDMVAMACAA 267 D +L + R + L+ VC+ W A +PDLW++++ S+ M A A Sbjct: 1066 DPTVLKIIFRYLPQDTLVTCCSVCKVWSNAAV-DPDLWKKMNCSE-----HKMSASLLTA 1119 Query: 268 VDRADGRLEHFAAD-CFVTDALLFYMAKRTNGLKSLRLVNC 387 + R + EH D + L ++ R LK+L L NC Sbjct: 1120 IVRR--QPEHLILDWTQIAKRQLAWLVARLPALKNLSLQNC 1158
>FXL17_HUMAN (Q9UF56) F-box/LRR-repeat protein 17 (F-box and leucine-rich repeat| protein 17) (F-box only protein 13) (Fragment) Length = 370 Score = 33.5 bits (75), Expect = 0.28 Identities = 25/112 (22%), Positives = 43/112 (38%) Frame = +1 Query: 106 VFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDLSDCFDPTIDMVAMACAAVDRADG 285 +F L E + A +VC+ W + + W+++DLS Sbjct: 1 IFSNLSLDERCLSASLVCKYWRDLCL-DFQFWKQLDLSSRQQ------------------ 41 Query: 286 RLEHFAADCFVTDALLFYMAKRTNGLKSLRLVNCMKVSDKGLVALGKRSPHL 441 VTD LL +A R+ + + + +C +SD G+ L + P L Sbjct: 42 ----------VTDELLEKIASRSQNIIEINISDCRSMSDNGVCVLAFKCPGL 83 Score = 30.0 bits (66), Expect = 3.1 Identities = 18/74 (24%), Positives = 32/74 (43%) Frame = +1 Query: 229 DPTIDMVAMACAAVDRADGRLEHFAADCFVTDALLFYMAKRTNGLKSLRLVNCMKVSDKG 408 D +I VA C + + H +TD L + + LK + C K+SD+G Sbjct: 96 DTSIIAVASHCPLLQKV-----HVGNQDKLTDEGLKQLGSKCRELKDIHFGQCYKISDEG 150 Query: 409 LVALGKRSPHLEEL 450 ++ + K L+ + Sbjct: 151 MIVIAKGCLKLQRI 164 Score = 28.5 bits (62), Expect = 8.9 Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Frame = +1 Query: 259 CAAVDRADGR--LEHFAADCFVTDALLFYMAKRTNGLKSLRLVNCMKVSDKGLVALGKRS 432 C V +G+ E + C +TD L + + + ++++ + C +++D+G + + S Sbjct: 252 CVEVIAKEGQNLKELYLVSCKITDYALIAIGRYSMTIETVDVGWCKEITDQGATLIAQSS 311 Query: 433 PHLEELELTTC 465 L L L C Sbjct: 312 KSLRYLGLMRC 322
>FBXW5_HUMAN (Q969U6) F-box/WD-repeat protein 5 (F-box and WD-40 domain protein| 5) Length = 566 Score = 33.5 bits (75), Expect = 0.28 Identities = 19/41 (46%), Positives = 24/41 (58%) Frame = +1 Query: 82 LPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWR 204 LPD + +F LG +VL AG+VCR W V+ E LWR Sbjct: 9 LPDSLVYQIFLSLGPADVL-AAGLVCRQWQAVSRDE-FLWR 47
>FXL13_HUMAN (Q8NEE6) F-box/LRR-repeat protein 13 (F-box and leucine-rich repeat| protein 13) Length = 735 Score = 33.1 bits (74), Expect = 0.36 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +1 Query: 361 LKSLRLVNCMKVSDKGLVALGKRSPHLEELELTTC 465 ++ L L NC+++SD ++ L +R P+L L L C Sbjct: 481 IRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNC 515
>YB95_SCHPO (O42970) Hypothetical serine-rich protein C1E8.05 precursor| Length = 317 Score = 32.7 bits (73), Expect = 0.47 Identities = 19/69 (27%), Positives = 29/69 (42%) Frame = -2 Query: 329 SASVTKQSAAKCSRRPXXXXXXXXXXXXXXMVGSKQSDRSTRRHRSGSPVATRSQLRQTT 150 S+S +K S++ S S +S S +S S ++ S + TT Sbjct: 172 SSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSKSSSKFSSSSFITSTT 231 Query: 149 PAPMSTSGA 123 PA S+SGA Sbjct: 232 PASSSSSGA 240
>FXL20_MOUSE (Q9CZV8) F-box/LRR-repeat protein 20 (F-box and leucine-rich repeat| protein 20) (F-box/LRR-repeat protein 2-like) Length = 436 Score = 32.3 bits (72), Expect = 0.62 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +1 Query: 340 MAKRTNGLKSLRLVNCMKVSDKGLVALGKRSPHLEELELTTC 465 + + GLK+L L C ++ D+ L +G P L L L TC Sbjct: 190 LVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTC 231 Score = 32.0 bits (71), Expect = 0.81 Identities = 17/50 (34%), Positives = 26/50 (52%) Frame = +1 Query: 316 VTDALLFYMAKRTNGLKSLRLVNCMKVSDKGLVALGKRSPHLEELELTTC 465 +TD L + + + L+SL C ++D L ALG+ P L LE+ C Sbjct: 234 ITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARC 283 Score = 28.5 bits (62), Expect = 8.9 Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 1/91 (1%) Frame = +1 Query: 196 LWRRVDLSDCFDPTIDMVAMACAAVDRADGRLEHFAADCF-VTDALLFYMAKRTNGLKSL 372 L ++++S C T D + A V G F C + D L Y+ L +L Sbjct: 170 LLEQLNISWCDQVTKDGIQ---ALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTL 226 Query: 373 RLVNCMKVSDKGLVALGKRSPHLEELELTTC 465 L C++++D+GL+ + + L+ L + C Sbjct: 227 NLQTCLQITDEGLITICRGCHKLQSLCASGC 257
>FXL20_HUMAN (Q96IG2) F-box/LRR-repeat protein 20 (F-box and leucine-rich repeat| protein 20) (F-box/LRR-repeat protein 2-like) Length = 436 Score = 32.3 bits (72), Expect = 0.62 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +1 Query: 340 MAKRTNGLKSLRLVNCMKVSDKGLVALGKRSPHLEELELTTC 465 + + GLK+L L C ++ D+ L +G P L L L TC Sbjct: 190 LVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTC 231 Score = 32.0 bits (71), Expect = 0.81 Identities = 17/50 (34%), Positives = 26/50 (52%) Frame = +1 Query: 316 VTDALLFYMAKRTNGLKSLRLVNCMKVSDKGLVALGKRSPHLEELELTTC 465 +TD L + + + L+SL C ++D L ALG+ P L LE+ C Sbjct: 234 ITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARC 283 Score = 28.5 bits (62), Expect = 8.9 Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 1/91 (1%) Frame = +1 Query: 196 LWRRVDLSDCFDPTIDMVAMACAAVDRADGRLEHFAADCF-VTDALLFYMAKRTNGLKSL 372 L ++++S C T D + A V G F C + D L Y+ L +L Sbjct: 170 LLEQLNISWCDQVTKDGIQ---ALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTL 226 Query: 373 RLVNCMKVSDKGLVALGKRSPHLEELELTTC 465 L C++++D+GL+ + + L+ L + C Sbjct: 227 NLQTCLQITDEGLITICRGCHKLQSLCASGC 257
>FXL20_RAT (Q9QZH7) F-box/LRR-repeat protein 20 (F-box and leucine-rich repeat| protein 20) (F-box/LRR-repeat protein 2-like) Length = 276 Score = 32.3 bits (72), Expect = 0.62 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +1 Query: 340 MAKRTNGLKSLRLVNCMKVSDKGLVALGKRSPHLEELELTTC 465 + + GLK+L L C ++ D+ L +G P L L L TC Sbjct: 190 LVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTC 231 Score = 28.5 bits (62), Expect = 8.9 Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 1/91 (1%) Frame = +1 Query: 196 LWRRVDLSDCFDPTIDMVAMACAAVDRADGRLEHFAADCF-VTDALLFYMAKRTNGLKSL 372 L ++++S C T D + A V G F C + D L Y+ L +L Sbjct: 170 LLEQLNISWCDQVTKDGIQ---ALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTL 226 Query: 373 RLVNCMKVSDKGLVALGKRSPHLEELELTTC 465 L C++++D+GL+ + + L+ L + C Sbjct: 227 NLQTCLQITDEGLITICRGCHKLQSLCASGC 257
>FBXW5_MOUSE (Q9QXW2) F-box/WD-repeat protein 5 (F-box and WD-40 domain protein| 5) Length = 573 Score = 32.3 bits (72), Expect = 0.62 Identities = 18/41 (43%), Positives = 24/41 (58%) Frame = +1 Query: 82 LPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWR 204 LPD + +F LG +VL AG+VCR W V+ E LW+ Sbjct: 9 LPDSLVYQIFLSLGPADVL-AAGLVCRQWQAVSRDE-FLWK 47
>PUR2_RHOBA (Q7UPZ8) Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS)| (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase) Length = 437 Score = 32.0 bits (71), Expect = 0.81 Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 11/97 (11%) Frame = +1 Query: 31 SQIGMASPPPSPPDWAGLPD---DALLTVFGRLGAPEVLMGAGVVCRNWLR---VATGEP 192 + +G+ P P AGL D DA L FG A L G+ V C+N LR + T + Sbjct: 64 NNVGLVIVGPEAPLVAGLVDALTDAGLRAFGPSKAASELEGSKVFCKNLLRSADIPTADY 123 Query: 193 DLWRRVD-----LSDCFDPTIDMVAMACAAVDRADGR 288 +R D + D F D V + A A G+ Sbjct: 124 RTFRSADDASRYIKDRFSEPTDPVNVVVKADGLAAGK 160
>FBXL3_HUMAN (Q9UKT7) F-box/LRR-repeat protein 3 (F-box/LRR-repeat protein 3A)| (F-box and leucine-rich repeat protein 3A) Length = 428 Score = 32.0 bits (71), Expect = 0.81 Identities = 20/45 (44%), Positives = 23/45 (51%) Frame = +1 Query: 70 DWAGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWR 204 DW L D +L VF L + A VCRNW +V PDLWR Sbjct: 35 DWGNLLQDIILQVFKYLPLLD-RAHASQVCRNWNQV-FHMPDLWR 77
>FBX6_RAT (Q923V4) F-box only protein 6 (F-box only protein 6b)| (F-box/G-domain protein 2) Length = 284 Score = 31.6 bits (70), Expect = 1.1 Identities = 17/49 (34%), Positives = 26/49 (53%) Frame = +1 Query: 82 LPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDLSDCF 228 LP++ LL +F + AP++L +VC W R LW+R L + F Sbjct: 7 LPENILLELFTHVPAPQLLRNCRLVCSLW-RDLIDVMTLWKRKSLREGF 54
>FBX2_MOUSE (Q80UW2) F-box only protein 2| Length = 297 Score = 31.6 bits (70), Expect = 1.1 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = +1 Query: 76 AGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLW 201 A LP+ LL V L A E++ +VC W + G P LW Sbjct: 52 AELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAP-LW 92
>FBX39_RAT (Q66H10) F-box only protein 39| Length = 443 Score = 31.6 bits (70), Expect = 1.1 Identities = 20/50 (40%), Positives = 24/50 (48%) Frame = +1 Query: 55 PPSPPDWAGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWR 204 P WA LPD L VF LG + A +VCR W ++ DLWR Sbjct: 10 PQDQSCWATLPDVCLRRVFWWLGDRD-RSRAALVCRKWNQIMY-SADLWR 57
>RAD7_YEAST (P06779) DNA repair protein RAD7| Length = 565 Score = 31.2 bits (69), Expect = 1.4 Identities = 16/35 (45%), Positives = 18/35 (51%) Frame = +1 Query: 361 LKSLRLVNCMKVSDKGLVALGKRSPHLEELELTTC 465 LK L +C K+S G L SPHL EL L C Sbjct: 236 LKRLTFSDCSKISFDGYKTLAIFSPHLTELSLQMC 270
>EMAP_STRPU (Q26613) 77 kDa echinoderm microtubule-associated protein| Length = 686 Score = 31.2 bits (69), Expect = 1.4 Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 7/44 (15%) Frame = -2 Query: 161 RQTTPAPMSTSGAPRRPNTVRRASSGRPAQS-------GGDGGG 51 R +T P S S PRRPNT R SS RP GG GG Sbjct: 4 RPSTARPNSAS--PRRPNTPGRPSSARPGSGRTRASPRGGSAGG 45
>FBX39_MOUSE (Q5NBU5) F-box only protein 39| Length = 443 Score = 31.2 bits (69), Expect = 1.4 Identities = 19/44 (43%), Positives = 23/44 (52%) Frame = +1 Query: 73 WAGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWR 204 WA LPD L VF LG + A +VCR W ++ DLWR Sbjct: 16 WATLPDVCLRRVFWWLGDRD-RSRAALVCRKWNQIMY-SADLWR 57
>ASF1_HELAN (P22357) Anther-specific protein SF18 precursor (Fragment)| Length = 161 Score = 31.2 bits (69), Expect = 1.4 Identities = 16/37 (43%), Positives = 19/37 (51%) Frame = -2 Query: 149 PAPMSTSGAPRRPNTVRRASSGRPAQSGGDGGGDAMP 39 PAP + G+P P G P +GGDGGG A P Sbjct: 113 PAPPAGGGSP--PPAGGDGGGGAPPPAGGDGGGGAPP 147 Score = 28.9 bits (63), Expect = 6.8 Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%) Frame = -2 Query: 152 TPAPMSTSGA--PRRPNTVRRASSGRPAQSGGDGGGDAMP 39 TP+P G P P A G P +GGDGGG A P Sbjct: 101 TPSPPGGDGGSGPAPP-----AGGGSPPPAGGDGGGGAPP 135
>CHSTE_MOUSE (Q80V53) Carbohydrate sulfotransferase D4ST1 (EC 2.8.2.-) (Dermatan| 4-sulfotransferase 1) (D4ST-1) Length = 376 Score = 31.2 bits (69), Expect = 1.4 Identities = 21/75 (28%), Positives = 31/75 (41%) Frame = +1 Query: 151 VVCRNWLRVATGEPDLWRRVDLSDCFDPTIDMVAMACAAVDRADGRLEHFAADCFVTDAL 330 V C NW RV + VD+ D D+V +A + RL+H+ FV D L Sbjct: 157 VACSNWKRVLKVLAGILNNVDVRLKMDHRSDLVFLADLRPEEIRYRLQHYFKFLFVRDPL 216 Query: 331 LFYMAKRTNGLKSLR 375 ++ N +R Sbjct: 217 ERLLSAYRNKFGEIR 231
>LEUD_PSEPK (Q88LE7) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 214 Score = 30.8 bits (68), Expect = 1.8 Identities = 21/62 (33%), Positives = 32/62 (51%) Frame = +1 Query: 193 DLWRRVDLSDCFDPTIDMVAMACAAVDRADGRLEHFAADCFVTDALLFYMAKRTNGLKSL 372 +L+++V+ + + TID+ A A V R DG++ HF D F LL NGL + Sbjct: 137 ELFKQVEANPGYQLTIDLQAQA---VTRPDGKVLHFEIDAFRKHCLL-------NGLDDI 186 Query: 373 RL 378 L Sbjct: 187 GL 188
>FBX39_BOVIN (Q32LM4) F-box only protein 39| Length = 443 Score = 30.8 bits (68), Expect = 1.8 Identities = 20/50 (40%), Positives = 24/50 (48%) Frame = +1 Query: 55 PPSPPDWAGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWR 204 P WA LPD L VF LG + A +VCR W ++ DLWR Sbjct: 10 PQDQSCWATLPDVCLRRVFWWLGDRD-RSRAALVCRKWNQMMY-SADLWR 57
>PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)| Length = 5120 Score = 30.4 bits (67), Expect = 2.3 Identities = 33/120 (27%), Positives = 47/120 (39%), Gaps = 3/120 (2%) Frame = -2 Query: 425 LPRATKPLSETFMQLTSRRLFKPLVLLAM*KSSASVTKQSAAKCSRRPXXXXXXXXXXXX 246 +P TKP ++T + KPL ++ KS + QS AK Sbjct: 573 MPETTKPPADTH-PAGDKPDSKPLPQVSRQKSDPKLASQSGAK----------------- 614 Query: 245 XXMVGSKQSDRSTRRHRSGSPVATRSQLRQTTPAPM-STSGAPRRP--NTVRRASSGRPA 75 SD T++ +PV + QT PAP T AP+ P T R +S +PA Sbjct: 615 --------SDAKTQKPSEPAPVKDDPKKLQTKPAPKPDTKPAPKGPQAGTGPRPTSAQPA 666
>ATU_DROME (Q94546) Another transcription unit protein| Length = 725 Score = 30.4 bits (67), Expect = 2.3 Identities = 26/86 (30%), Positives = 31/86 (36%), Gaps = 2/86 (2%) Frame = -2 Query: 329 SASVTKQ--SAAKCSRRPXXXXXXXXXXXXXXMVGSKQSDRSTRRHRSGSPVATRSQLRQ 156 S SVT Q SA R S+ S R RSGS + SQL Sbjct: 20 SRSVTPQGGSAPGSQRSRRSGSGSDRSRSGSRSSRSRSGSGSPRSARSGSAESRHSQLSG 79 Query: 155 TTPAPMSTSGAPRRPNTVRRASSGRP 78 + + S S RR + R SG P Sbjct: 80 SARSKRSRSAHSRRSGSARSRKSGTP 105
>ARK72_RAT (Q8CG45) Aflatoxin B1 aldehyde reductase member 2 (EC 1.-.-.-)| (rAFAR2) Length = 367 Score = 30.4 bits (67), Expect = 2.3 Identities = 17/32 (53%), Positives = 19/32 (59%) Frame = -2 Query: 197 RSGSPVATRSQLRQTTPAPMSTSGAPRRPNTV 102 RSG VA R +PAP + SGAP RP TV Sbjct: 19 RSGPSVA-RPLAMSRSPAPRAVSGAPLRPGTV 49
>FBX2_HUMAN (Q9UK22) F-box only protein 2| Length = 296 Score = 30.4 bits (67), Expect = 2.3 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = +1 Query: 82 LPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLW 201 LP+ LL V L A E++ +VC W + G P LW Sbjct: 50 LPEPLLLRVLAALPAAELVQACRLVCLRWKELVDGAP-LW 88
>GAF1_SCHPO (Q10280) Transcription factor gaf1 (Gaf-1)| Length = 855 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/42 (45%), Positives = 21/42 (50%) Frame = -2 Query: 170 SQLRQTTPAPMSTSGAPRRPNTVRRASSGRPAQSGGDGGGDA 45 S L + P P S S PRRPNT R SS Q G G D+ Sbjct: 403 SSLPISAPVPNSNSQFPRRPNTFRTNSSKSVGQ--GSSGVDS 442
>JHD1B_HUMAN (Q8NHM5) JmjC domain-containing histone demethylation protein 1B (EC| 1.14.11.-) (F-box/LRR-repeat protein 10) (F-box and leucine-rich repeat protein 10) (F-box protein FBL10) (Protein JEMMA) (Jumonji containing domain EMSY-interactor methyltr Length = 1336 Score = 30.0 bits (66), Expect = 3.1 Identities = 35/130 (26%), Positives = 52/130 (40%), Gaps = 10/130 (7%) Frame = +1 Query: 52 PPP--SPPDWAGLPDDAL--------LTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLW 201 PPP PPD L D A + VF L ++ + V CR W R + LW Sbjct: 1045 PPPISPPPDSLPLDDGAAHVMHREVWMAVFSYLSHQDLCVCMRV-CRTWNRWCC-DKRLW 1102 Query: 202 RRVDLSDCFDPTIDMVAMACAAVDRADGRLEHFAADCFVTDALLFYMAKRTNGLKSLRLV 381 R+DL+ C T M + R L+ + ++ L ++ R GL+ L L Sbjct: 1103 TRIDLNHCKSIT---PLMLSGIIRRQPVSLDLSWTN--ISKKQLSWLINRLPGLRDLVLS 1157 Query: 382 NCMKVSDKGL 411 C ++ L Sbjct: 1158 GCSWIAVSAL 1167
>ACON2_ECOLI (P36683) Aconitate hydratase 2 (EC 4.2.1.3) (Citrate hydro-lyase 2)| (Aconitase 2) Length = 865 Score = 30.0 bits (66), Expect = 3.1 Identities = 18/53 (33%), Positives = 29/53 (54%) Frame = +1 Query: 28 PSQIGMASPPPSPPDWAGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATG 186 P+++ +A PP+ D A L ++ +VFG+ GA + G + N RVA G Sbjct: 732 PTRLWVA--PPTRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVADG 782
>HME2_CHICK (Q05917) Homeobox protein engrailed-2 (Gg-En-2)| Length = 288 Score = 30.0 bits (66), Expect = 3.1 Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 7/39 (17%) Frame = -2 Query: 134 TSGAPRRPNTVRRASS-------GRPAQSGGDGGGDAMP 39 T+G PRRP R S G P GG GGG P Sbjct: 70 TAGEPRRPGAESRRSPAAAAPAPGAPVPGGGGGGGGGSP 108
>CAT8_YEAST (P39113) Regulatory protein CAT8| Length = 1433 Score = 30.0 bits (66), Expect = 3.1 Identities = 16/61 (26%), Positives = 31/61 (50%) Frame = -2 Query: 230 SKQSDRSTRRHRSGSPVATRSQLRQTTPAPMSTSGAPRRPNTVRRASSGRPAQSGGDGGG 51 S+++ +S ++ +P +T Q+R+T+ P ++ PRRP R + + GG Sbjct: 1362 SQENSKSATGNQLDTP-STLFQMRRTSSGPSASHRGPRRPQKNRYNTDRSKSSGGGSSNT 1420 Query: 50 D 48 D Sbjct: 1421 D 1421
>MDC1_MOUSE (Q5PSV9) Mediator of DNA damage checkpoint protein 1| Length = 1707 Score = 30.0 bits (66), Expect = 3.1 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Frame = -2 Query: 215 RSTRRHRSGSPVATRSQLRQTTPA--PMSTSGAPRRPNTVRRASSGRPAQS 69 R+TR S S + T + T P P++++ P PN RAS GR ++S Sbjct: 1199 RATRGRPSKSSIKTPESVVPTGPELQPLTSAKQPVTPNLTSRASRGRSSKS 1249
>KPC1_ASPNG (Q00078) Protein kinase C-like (EC 2.7.11.13)| Length = 1096 Score = 29.6 bits (65), Expect = 4.0 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = -2 Query: 140 MSTSGAPRRPNTVRRASSGRPAQSGGDGGGDAMPIWLGLSGS 15 M GAP RP+T A S P+ GG G + G +G+ Sbjct: 360 MEHGGAPGRPDTAGGAGSAHPSGPGGPGAAPSQGYGDGSAGA 401
>GLMM_BACLD (Q65P47) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 448 Score = 29.6 bits (65), Expect = 4.0 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 7/81 (8%) Frame = +1 Query: 241 DMVAMACAAVDRADGRLEHFAADCFVTDALLFYMAKRTNGLKSLR-------LVNCMKVS 399 D + CA +++GRL V L FY A G+KS++ +V MK Sbjct: 259 DQIMYICAKYLKSEGRLTDNTVVSTVMSNLGFYKALEAEGIKSVQTAVGDRYVVEAMKKG 318 Query: 400 DKGLVALGKRSPHLEELELTT 462 G G++S HL L+ T Sbjct: 319 --GFTLGGEQSGHLIFLDYNT 337
>COIA1_HUMAN (P39060) Collagen alpha-1(XVIII) chain precursor [Contains:| Endostatin] Length = 1516 Score = 29.6 bits (65), Expect = 4.0 Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 1/51 (1%) Frame = -2 Query: 188 SPVATRSQLRQTTPAPMSTSGAPRRPNTVRRASSGRPAQSGGDG-GGDAMP 39 SP+ QT P P G P R T R G P G DG GD P Sbjct: 553 SPLGPAGPALQTVPGPQGPPGPPGRDGTPGR--DGEPGDPGEDGKPGDTGP 601
>SCND2_HUMAN (Q9GZW5) SCAN domain-containing protein 2| Length = 306 Score = 29.6 bits (65), Expect = 4.0 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Frame = -2 Query: 212 STRRHRSGSPVATRSQLRQTTPAPMSTSGAPRRPNTVRRASSG--RPAQSGGDG 57 S R RS S A ++ T ++ + APRRP RR +G RP + G G Sbjct: 194 SARTGRSTSSCARAARAPSATEGALTRTPAPRRPLQRRRPGTGPWRPGRQRGAG 247
>DLT_DROME (Q8T626) Protein disks lost (Protein vanaso) (Codanin 1 homolog)| Length = 1240 Score = 29.6 bits (65), Expect = 4.0 Identities = 22/67 (32%), Positives = 31/67 (46%) Frame = -2 Query: 227 KQSDRSTRRHRSGSPVATRSQLRQTTPAPMSTSGAPRRPNTVRRASSGRPAQSGGDGGGD 48 +Q + S+ RS +++ S TTPAP G P + + S P +SGG G G Sbjct: 108 QQLNESSILSRSSCSMSSTSN---TTPAPQQPQGRRSTPGSGAQFCS-TPNRSGGGGAGG 163 Query: 47 AMPIWLG 27 I LG Sbjct: 164 GHSICLG 170
>WASF2_HUMAN (Q9Y6W5) Wiskott-Aldrich syndrome protein family member 2| (WASP-family protein member 2) (WAVE-2 protein) (Verprolin homology domain-containing protein 2) Length = 498 Score = 26.2 bits (56), Expect(2) = 4.1 Identities = 11/27 (40%), Positives = 13/27 (48%) Frame = +1 Query: 49 SPPPSPPDWAGLPDDALLTVFGRLGAP 129 +PPP PP G+P FG G P Sbjct: 321 APPPPPPPMIGIPPPPPPVGFGSPGTP 347 Score = 21.9 bits (45), Expect(2) = 4.1 Identities = 7/17 (41%), Positives = 11/17 (64%) Frame = +1 Query: 19 PESPSQIGMASPPPSPP 69 P+ S + + PPP+PP Sbjct: 289 PKRSSVVSPSHPPPAPP 305
>WASF4_HUMAN (Q8IV90) Wiskott-Aldrich syndrome protein family member 4| (WASP-family protein member 4) Length = 625 Score = 25.8 bits (55), Expect(2) = 5.1 Identities = 11/27 (40%), Positives = 13/27 (48%) Frame = +1 Query: 49 SPPPSPPDWAGLPDDALLTVFGRLGAP 129 +PPP PP G+P FG G P Sbjct: 449 APPPPPPPMIGIPPPPPPIGFGSPGTP 475 Score = 21.9 bits (45), Expect(2) = 5.1 Identities = 7/17 (41%), Positives = 11/17 (64%) Frame = +1 Query: 19 PESPSQIGMASPPPSPP 69 P+ S + + PPP+PP Sbjct: 417 PKRSSVVSPSHPPPAPP 433
>TOM40_MOUSE (Q9QYA2) Probable mitochondrial import receptor subunit TOM40| homolog (Translocase of outer membrane 40 kDa subunit homolog) Length = 359 Score = 29.3 bits (64), Expect = 5.2 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = +1 Query: 19 PESPSQIGMASPPPSPP 69 P +PS +G+ PPPSPP Sbjct: 16 PPTPSLVGLPPPPPSPP 32
>UN13D_HUMAN (Q70J99) Unc-13 homolog D (Munc13-4)| Length = 1090 Score = 29.3 bits (64), Expect = 5.2 Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 4/43 (9%) Frame = +1 Query: 16 LPESPSQIGMASPPPS----PPDWAGLPDDALLTVFGRLGAPE 132 L + P Q+ PPS P A L +DAL TV RLG PE Sbjct: 29 LQDPPPQMAPEIQPPSHHFSPEQRALLYEDALYTVLHRLGHPE 71
>TOM40_RAT (Q75Q40) Probable mitochondrial import receptor subunit TOM40| homolog (Translocase of outer membrane 40 kDa subunit homolog) (38 kDa mitochondrial outer membrane protein) (OM38) Length = 361 Score = 29.3 bits (64), Expect = 5.2 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = +1 Query: 19 PESPSQIGMASPPPSPP 69 P +PS +G+ PPPSPP Sbjct: 17 PPTPSLVGLPPPPPSPP 33
>VE2_HPV5B (P26545) Regulatory protein E2| Length = 514 Score = 29.3 bits (64), Expect = 5.2 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 4/62 (6%) Frame = -2 Query: 224 QSDRSTRRHRSGSPVATRSQLRQ----TTPAPMSTSGAPRRPNTVRRASSGRPAQSGGDG 57 Q RS RHRS S +RS+ + +T STS R T R S GR + G Sbjct: 264 QQRRSRSRHRSRSRSRSRSKSQTHTTWSTTRSRSTSVGKTRALTSRSRSRGRSPSTCRRG 323 Query: 56 GG 51 GG Sbjct: 324 GG 325
>VE2_HPV05 (P06921) Regulatory protein E2| Length = 514 Score = 29.3 bits (64), Expect = 5.2 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Frame = -2 Query: 224 QSDRSTRRHRSGSPVATRSQLR----QTTPAPMSTSGAPRRPNTVRRASSGRPAQSGGDG 57 Q RS RHRS S +RS+ + ++T STS R T R S GR + G Sbjct: 264 QQRRSRSRHRSRSRSRSRSKSQTHTTRSTTRSRSTSLTKTRALTSRSRSRGRSPTTCRRG 323 Query: 56 GG 51 GG Sbjct: 324 GG 325
>HNRPL_MOUSE (Q8R081) Heterogeneous nuclear ribonucleoprotein L (hnRNP L)| Length = 555 Score = 29.3 bits (64), Expect = 5.2 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = +1 Query: 34 QIGMASPPPSPPDWAGLPDDALLTVFG 114 Q G PPP PPD+ D +L V+G Sbjct: 328 QYGHPPPPPPPPDYGPHADSPVLMVYG 354
>EL5_ORYSA (Q9LRB7) E3 ubiquitin ligase EL5 (EC 6.3.2.-)| Length = 325 Score = 29.3 bits (64), Expect = 5.2 Identities = 17/37 (45%), Positives = 19/37 (51%) Frame = -2 Query: 161 RQTTPAPMSTSGAPRRPNTVRRASSGRPAQSGGDGGG 51 R+ STSG RRP RR+ SG GG GGG Sbjct: 65 RRRAVTTTSTSGRGRRPRPRRRSGSG---GDGGTGGG 98
>MED3_YEAST (P40356) RNA polymerase II mediator complex subunit 3| (Poly-glutamine domain protein 1) (Hyper-recombination suppressor protein 1) Length = 397 Score = 29.3 bits (64), Expect = 5.2 Identities = 14/46 (30%), Positives = 24/46 (52%) Frame = -2 Query: 206 RRHRSGSPVATRSQLRQTTPAPMSTSGAPRRPNTVRRASSGRPAQS 69 R +SGS + T + T AP++ PR+P ++A + AQ+ Sbjct: 185 RGPKSGSTMGTPTVHNSTAAAPIAAPKKPRKPRQTKKAKAQAQAQA 230
>VE2_HPV12 (P36782) Regulatory protein E2| Length = 494 Score = 29.3 bits (64), Expect = 5.2 Identities = 19/57 (33%), Positives = 27/57 (47%) Frame = -2 Query: 224 QSDRSTRRHRSGSPVATRSQLRQTTPAPMSTSGAPRRPNTVRRASSGRPAQSGGDGG 54 Q RS R+RS S +RSQ + S S + R P+ + + +QS G GG Sbjct: 258 QQRRSRSRYRSQSNSRSRSQSQTRALGATSVSRSSRSPSVTQIRNRRSRSQSRGRGG 314
>RHLB_XANCP (Q8P4D4) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 573 Score = 29.3 bits (64), Expect = 5.2 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -2 Query: 227 KQSDRSTRRHRSGSPVATRSQLRQTTPAPMSTSGAPRRPNTV 102 +++ R RR R+G PV + +TP P APR+P V Sbjct: 502 ERAPRKRRRRRNGRPVEGAEPVVASTPVP--APAAPRKPTQV 541
>RHLB_XANAC (Q8PFZ3) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 571 Score = 29.3 bits (64), Expect = 5.2 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = -2 Query: 230 SKQSDRSTRRHRSGSPVATRSQLRQTTPAPMSTSGAPRRPNTV 102 ++++ R RR R+G PV +TP P APR+P V Sbjct: 499 AERAPRKRRRRRNGRPVEGAEPALASTPVP--APAAPRKPTQV 539
>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 505 Score = 24.6 bits (52), Expect(2) = 5.2 Identities = 9/14 (64%), Positives = 9/14 (64%) Frame = +1 Query: 52 PPPSPPDWAGLPDD 93 PPP PP GLP D Sbjct: 381 PPPGPPPPPGLPSD 394 Score = 23.1 bits (48), Expect(2) = 5.2 Identities = 9/18 (50%), Positives = 9/18 (50%) Frame = +1 Query: 16 LPESPSQIGMASPPPSPP 69 LP PS PPP PP Sbjct: 347 LPALPSSAPSGPPPPPPP 364
>OTSB_ECOLI (P31678) Trehalose-phosphatase (EC 3.1.3.12) (Trehalose 6-phosphate| phosphatase) (TPP) Length = 266 Score = 28.9 bits (63), Expect = 6.8 Identities = 16/45 (35%), Positives = 25/45 (55%) Frame = +1 Query: 82 LPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWRRVDL 216 L D++ V RLG V +G G +W R+A G PD+W +++ Sbjct: 200 LTDESGFAVVNRLGGMSVKIGTGATQASW-RLA-GVPDVWSWLEM 242
>XKDO_BACSU (P54334) Phage-like element PBSX protein xkdO| Length = 1332 Score = 28.9 bits (63), Expect = 6.8 Identities = 17/50 (34%), Positives = 22/50 (44%) Frame = -2 Query: 176 TRSQLRQTTPAPMSTSGAPRRPNTVRRASSGRPAQSGGDGGGDAMPIWLG 27 T + + T AP T P +RR SG PA+S G + WLG Sbjct: 328 TYRKKKSPTKAPNRTLKVPGE--VIRRRQSGTPAESAPRTSGSKLKNWLG 375
>VASP_BOVIN (Q2TA49) Vasodilator-stimulated phosphoprotein (VASP)| Length = 382 Score = 28.9 bits (63), Expect = 6.8 Identities = 19/60 (31%), Positives = 25/60 (41%) Frame = -2 Query: 230 SKQSDRSTRRHRSGSPVATRSQLRQTTPAPMSTSGAPRRPNTVRRASSGRPAQSGGDGGG 51 S+ +R R +G P A + P P G P P +SSG A + G GGG Sbjct: 149 SELMERERRASNAGGPPAASAGAPPPPPGPPPPPGPPPPPGL---SSSGVSAATQGAGGG 205
>TSYL1_HUMAN (Q9H0U9) Testis-specific Y-encoded-like protein 1 (TSPY-like 1)| Length = 438 Score = 28.9 bits (63), Expect = 6.8 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +1 Query: 43 MASPPPSPPDWAGLPDDALLTVFGRLGAPEVLMGAG 150 +A PPP P + G+P DA GR G P++ + G Sbjct: 57 VALPPPPPSEEGGVPQDAA----GRGGTPQIRVVGG 88
>FBX39_HUMAN (Q8N4B4) F-box only protein 39| Length = 442 Score = 28.9 bits (63), Expect = 6.8 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = +1 Query: 55 PPSPPDWAGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRVATGEPDLWR 204 P WA LPD L VF LG + A +VCR W ++ +LWR Sbjct: 10 PQDQSCWAFLPDLCLCRVFWWLGDRD-RSRAALVCRKWNQMMY-SAELWR 57
>VKGC_RAT (O88496) Vitamin K-dependent gamma-carboxylase (EC 6.4.-.-)| (Gamma-glutamyl carboxylase) (Vitamin K gamma glutamyl carboxylase) Length = 758 Score = 28.5 bits (62), Expect = 8.9 Identities = 10/18 (55%), Positives = 15/18 (83%) Frame = +2 Query: 308 IVSSPMRCSSTWPRELMA 361 + SSP+ CS+ WPR+L+A Sbjct: 304 LASSPLFCSAEWPRKLVA 321
>FMN_CHICK (Q05858) Formin (Limb deformity protein)| Length = 1213 Score = 28.5 bits (62), Expect = 8.9 Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 6/79 (7%) Frame = +1 Query: 19 PESPSQIGMASPPPSPPDWAGLPDDALLTVFGRLGAPEVLMGAGVVCRNWLRV------A 180 P P G PPP PP GL ++ L+ P + + W R+ Sbjct: 732 PVPPPLPGSGLPPPPPPPGPGLFFNSTLSSSQGPRKPAIEPSRPMKPLYWTRIQLQGSRK 791 Query: 181 TGEPDLWRRVDLSDCFDPT 237 T P LW ++ D D T Sbjct: 792 TAIPTLWESLEEPDILDTT 810
>CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor| Length = 1759 Score = 28.5 bits (62), Expect = 8.9 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 2/64 (3%) Frame = -2 Query: 203 RHRSGSPVATRSQLRQTTPAPMSTSGAPRRPNTVRRASSGRPAQSGGDG--GGDAMPIWL 30 R SG P R P P+ G P + G P Q+G DG G D +P Sbjct: 1235 RGESGQPGQPGLPGRDGQPGPVGPPGDDGYPGAPGQDIYGPPGQAGQDGYPGLDGLPGAP 1294 Query: 29 GLSG 18 GL+G Sbjct: 1295 GLNG 1298
>ARR4_ARATH (O82798) Two-component response regulator ARR4 (Response regulator| 1) Length = 259 Score = 28.5 bits (62), Expect = 8.9 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = +1 Query: 10 QRLPESPSQIGMASPPPSPP 69 ++LPE S + + PPPSPP Sbjct: 173 RKLPEDSSSVNSSLPPPSPP 192
>RHLB_XANOR (Q5GUR8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 574 Score = 28.5 bits (62), Expect = 8.9 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 7/65 (10%) Frame = -2 Query: 230 SKQSDRSTRRHRSGSPVATRSQLRQTTPAPMSTSGAPRRPNTV-------RRASSGRPAQ 72 ++++ R RR R+G PV +T P++ APR+P V SSG P+ Sbjct: 502 AERAPRKRRRRRNGRPVEGAEPAVAST--PIAAPAAPRKPTQVVATPVRAANKSSGSPSL 559 Query: 71 SGGDG 57 G G Sbjct: 560 LGRIG 564
>YQOA_CAEEL (Q09299) Putative RNA-binding protein EEED8.10| Length = 738 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +1 Query: 358 GLKSLRLVNCMKVSDKGLVALGKRSPHLEELEL 456 GLK LR+ C K++D+ L + +R L L L Sbjct: 444 GLKELRINECYKITDENLSMIARRMEDLSILTL 476
>FMN2_MOUSE (Q9JL04) Formin-2| Length = 1567 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +1 Query: 16 LPESPSQIGMASPPPSPPDWAGLPDDALLTVFGRLGAPEVLMGAG 150 +P P+ G+A PPP P G+P A + P +L G+G Sbjct: 1042 IPPPPALPGVAIPPPPPLPGMGVPPPAPPPPGAGIPPPPLLPGSG 1086
>VKGC_MOUSE (Q9QYC7) Vitamin K-dependent gamma-carboxylase (EC 6.4.-.-)| (Gamma-glutamyl carboxylase) (Vitamin K gamma glutamyl carboxylase) Length = 757 Score = 28.5 bits (62), Expect = 8.9 Identities = 10/18 (55%), Positives = 15/18 (83%) Frame = +2 Query: 308 IVSSPMRCSSTWPRELMA 361 + SSP+ CS+ WPR+L+A Sbjct: 304 LASSPLFCSAEWPRKLVA 321
>MATK_DIAEN (Q6LA20) Maturase K (Intron maturase)| Length = 522 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +1 Query: 55 PPSPPDWAGLPDDALLTVFGRL 120 P S P WA LPD +L FGR+ Sbjct: 403 PISKPIWADLPDSDILDQFGRI 424
>COT2_MOUSE (P43135) COUP transcription factor 2 (COUP-TF2) (COUP-TF II)| (Apolipoprotein AI regulatory protein 1) (ARP-1) Length = 414 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%) Frame = -2 Query: 185 PVATRSQLRQTTPAPMSTSGAPRRPNTVRRAS-SGRPAQ--SGGDGG 54 P + SQ Q P P GAP P T + + PAQ +GG GG Sbjct: 16 PGSQGSQASQAPPVPGPPPGAPHTPQTPGQGGPASTPAQTAAGGQGG 62
>COT2_HUMAN (P24468) COUP transcription factor 2 (COUP-TF2) (COUP-TF II)| (Apolipoprotein AI regulatory protein 1) (ARP-1) Length = 414 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%) Frame = -2 Query: 185 PVATRSQLRQTTPAPMSTSGAPRRPNTVRRAS-SGRPAQ--SGGDGG 54 P + SQ Q P P GAP P T + + PAQ +GG GG Sbjct: 16 PGSQGSQASQAPPVPGPPPGAPHTPQTPGQGGPASTPAQTAAGGQGG 62
>COT2_BOVIN (Q9TTR7) COUP transcription factor 2 (COUP-TF2) (COUP-TF II)| Length = 414 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%) Frame = -2 Query: 185 PVATRSQLRQTTPAPMSTSGAPRRPNTVRRAS-SGRPAQ--SGGDGG 54 P + SQ Q P P GAP P T + + PAQ +GG GG Sbjct: 16 PGSQGSQASQAPPVPGPPPGAPHTPQTPGQGGPASTPAQTAAGGQGG 62 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,740,614 Number of Sequences: 219361 Number of extensions: 1124179 Number of successful extensions: 6662 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 5643 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6584 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
