>ADRM1_RAT (Q9JMB5) Adhesion-regulating molecule 1 precursor (110 kDa cell|
           membrane glycoprotein) (Gp110)
          Length = 407

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 24/39 (61%), Positives = 30/39 (76%)
 Frame = +1

Query: 304 MCEFRAGKMSLEGTRVVPDTRKGLVRIGKGEEGLVHFQW 420
           + EFRAGKMSL+GT V PD RKGLV I + ++ L+HF W
Sbjct: 23  LVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCW 61

>ADRM1_MOUSE (Q9JKV1) Adhesion-regulating molecule 1 precursor (110 kDa cell|
           membrane glycoprotein) (Gp110) (ARM-1)
          Length = 407

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 24/39 (61%), Positives = 30/39 (76%)
 Frame = +1

Query: 304 MCEFRAGKMSLEGTRVVPDTRKGLVRIGKGEEGLVHFQW 420
           + EFRAGKMSL+GT V PD RKGLV I + ++ L+HF W
Sbjct: 23  LVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCW 61

>ADRM1_HUMAN (Q16186) Adhesion-regulating molecule 1 precursor (110 kDa cell|
           membrane glycoprotein) (Gp110)
          Length = 407

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 24/39 (61%), Positives = 30/39 (76%)
 Frame = +1

Query: 304 MCEFRAGKMSLEGTRVVPDTRKGLVRIGKGEEGLVHFQW 420
           + EFRAGKMSL+GT V PD RKGLV I + ++ L+HF W
Sbjct: 23  LVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCW 61

>YQK7_CAEEL (Q09289) Hypothetical protein C56G2.7|
          Length = 374

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 6/43 (13%)
 Frame = +1

Query: 310 EFRAGKMSLEG------TRVVPDTRKGLVRIGKGEEGLVHFQW 420
           EF+AG+  LE        +VV + +KGLV I +  + L+HF W
Sbjct: 20  EFKAGRSRLEAGSGDTMRKVVAEPKKGLVFIKQSNDMLIHFCW 62

>SYA_METCA (Q60BS6) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 867

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = +1

Query: 280 SSEPLQDIMCEFRAGKMSLEGTRVVPDTRKG--LVRIGKGEEGLV 408
           S E   D+ CEF   + ++E TR+V   R G  + R+  GE+G+V
Sbjct: 436 SQEIHLDVACEFTGYRNAVEDTRIVALLRDGQAVDRLEAGEDGVV 480

>MSRB_SYNEL (Q8DJK9) Peptide methionine sulfoxide reductase msrB (EC 1.8.4.6)|
          Length = 135

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -3

Query: 367 CVCLGPPVFPQETSYQHGT 311
           CVC G P+F  ET Y  GT
Sbjct: 47  CVCCGTPLFRSETKYDSGT 65

>KCNG2_RAT (Q9QYU3) Potassium voltage-gated channel subfamily G member 2|
           (Voltage-gated potassium channel subunit Kv6.2) (Cardiac
           potassium channel subunit)
          Length = 480

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 14/25 (56%), Positives = 14/25 (56%)
 Frame = +2

Query: 341 EHGWSQTHARGLFVLERVKKAWFIF 415
           E G   T  R LFVLE V  AWF F
Sbjct: 220 ERGECSTKCRNLFVLETVCVAWFSF 244

>RS1_RHOPA (Q6NDP1) 30S ribosomal protein S1 (RRP-S1)|
          Length = 565

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +1

Query: 250 PVRWVLPSMESSEPLQDIMCEFRAGKMSLEGTRVVPDTR 366
           P+R V P M +S+P Q +  + R G + +    V+ +TR
Sbjct: 149 PIRDVAPLMNNSQPFQILKMDRRRGNIVVSRRTVLEETR 187

>SYT_PYRFU (Q8U176) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA|
           ligase) (ThrRS)
          Length = 625

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -3

Query: 331 TSYQHGTHTLYPGVVHCSPSMAVPNEQVLLAI 236
           T Y       YP ++HCSPS A+  E+V+ AI
Sbjct: 459 TYYDENGEEKYPLILHCSPSGAI--ERVMYAI 488

>SYT_PYRAB (Q9UZ14) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA|
           ligase) (ThrRS)
          Length = 625

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -3

Query: 331 TSYQHGTHTLYPGVVHCSPSMAVPNEQVLLAI 236
           T Y       YP ++HCSPS A+  E+V+ AI
Sbjct: 459 TYYDENGEEKYPLILHCSPSGAI--ERVMYAI 488


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,411,351
Number of Sequences: 219361
Number of extensions: 782046
Number of successful extensions: 2121
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2121
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)