ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast47a10 |
|---|---|
| Clone Library Name | barley_pub |
>CCDC9_HUMAN (Q9Y3X0) Coiled-coil domain-containing protein 9| Length = 531 Score = 32.0 bits (71), Expect = 0.71 Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 23/94 (24%) Frame = -1 Query: 441 SESARRECSGRMRRTWGRELTPNWEKECCDSEN-----------------SMSAKKRSEE 313 SE RRE S R R WG P++E+ C E+ SM+ ++RSE Sbjct: 208 SERDRREESRRHGRNWG---GPDFERVRCGLEHERQGRRAGLGSAGDMTLSMTGRERSE- 263 Query: 312 SGLLAWK------EAERSANSRRSWGRWRSVLEW 229 L WK + ER R+ G+WR EW Sbjct: 264 --YLRWKQEREKIDQERLQRHRKPTGQWRR--EW 293
>DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-associated| transcription factor 1) (DATF-1) (hDido1) Length = 2240 Score = 30.8 bits (68), Expect = 1.6 Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 3/92 (3%) Frame = -1 Query: 354 DSENSMSAKKRSEESGLLAWKEAERSANSRRSWGRWR---SVLEWSEVASKKTRTE*GRE 184 D++ S +R E W ER + R W R R S +W + + RE Sbjct: 2104 DAQGRASEDRRRERERGRNWSR-ERDWDRPREWDRHRDKDSSRDWDRNRERSANRDRERE 2162 Query: 183 ADERKRVTEVSVRWTTPEGERERRDWSSPTRS 88 AD K R E ER+RR +RS Sbjct: 2163 ADRGKEWDRSRERSRNRERERDRRRDRDRSRS 2194
>MOG1_CAEEL (P34498) Probable pre-mRNA-splicing factor ATP-dependent RNA| helicase mog-1 (EC 3.6.1.-) (Sex determination protein mog-1) (Masculinization of germ line protein 1) Length = 1131 Score = 30.4 bits (67), Expect = 2.1 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 4/99 (4%) Frame = -1 Query: 369 EKECCDSENSMSAKKRSEESGLLAWKEAERSANSRRSW----GRWRSVLEWSEVASKKTR 202 EK + M K R ++ + R +SRR W G + + S+ + Sbjct: 80 EKHRDRDDRGMKYKSRDDDRRRDRDRSERREPSSRRGWKDRSGDQTPRFKVPDTPSRMSW 139 Query: 201 TE*GREADERKRVTEVSVRWTTPEGERERRDWSSPTRSL 85 + RE RKR S TP GER+R+ + RS+ Sbjct: 140 DQDDREGSSRKRN---SWDMPTPRGERDRKRYMDSERSI 175
>IAG2_RAT (O35777) Implantation-associated protein| Length = 335 Score = 30.0 bits (66), Expect = 2.7 Identities = 20/86 (23%), Positives = 37/86 (43%) Frame = +2 Query: 137 VVHLTDTSVTRFLSSASRPYSVLVFFDATSLHSKTDLHLPQLRREFALLSASFHANNPDS 316 V+ + + + R YSV+V F A LH + + Q EF +L+ + ++ + Sbjct: 53 VIRMNGDKFRPLVKAPPRNYSVIVMFTALQLHRQC-VVCKQADEEFQILANFWRYSSAFT 111 Query: 317 SDLFFADIXXXXXXXXXXXXGVNSLP 394 + +FFA + +NS P Sbjct: 112 NRIFFAMVDFDEGSDVFQMLNMNSAP 137
>TINY_ARATH (Q39127) Transcriptional factor TINY| Length = 218 Score = 30.0 bits (66), Expect = 2.7 Identities = 16/49 (32%), Positives = 22/49 (44%) Frame = -1 Query: 387 ELTPNWEKECCDSENSMSAKKRSEESGLLAWKEAERSANSRRSWGRWRS 241 E T +WE EN KK ++SG K +R+WG+W S Sbjct: 5 ESTKSWEASAVRQENEEEKKKPVKDSG----KHPVYRGVRKRNWGKWVS 49
>IF2_BRUME (Q8YEB3) Translation initiation factor IF-2| Length = 959 Score = 29.6 bits (65), Expect = 3.5 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 6/91 (6%) Frame = -1 Query: 351 SENSMSAKKRS-EESGLLAWKEAERSANS--RRSWGRWRSVLEWSEVASKKTRTE*GREA 181 S + M A++R+ EE+ + +E R+ RR+ R E E A ++ E +A Sbjct: 152 SRSEMDARRRALEEAQIREVEERARAVEEAKRRAEEDARRAKEHEESARRQAEEEARLKA 211 Query: 180 D---ERKRVTEVSVRWTTPEGERERRDWSSP 97 + RK E + R PE ERRD + P Sbjct: 212 EAEARRKAEEEAAKRMPQPEARSERRDDARP 242
>IF2_BRUSU (Q8FXT2) Translation initiation factor IF-2| Length = 959 Score = 29.3 bits (64), Expect = 4.6 Identities = 27/79 (34%), Positives = 34/79 (43%) Frame = -1 Query: 333 AKKRSEESGLLAWKEAERSANSRRSWGRWRSVLEWSEVASKKTRTE*GREADERKRVTEV 154 AK+R+EE A KE E SA + E A K E R+A+E E Sbjct: 181 AKRRAEEDARRA-KEREESARRQAE-----------EEARLKAEAEARRKAEE-----EA 223 Query: 153 SVRWTTPEGERERRDWSSP 97 + R PE ERRD + P Sbjct: 224 AKRMPQPEARSERRDDARP 242
>IF2_BRUAB (Q57AA0) Translation initiation factor IF-2| Length = 959 Score = 29.3 bits (64), Expect = 4.6 Identities = 27/79 (34%), Positives = 34/79 (43%) Frame = -1 Query: 333 AKKRSEESGLLAWKEAERSANSRRSWGRWRSVLEWSEVASKKTRTE*GREADERKRVTEV 154 AK+R+EE A KE E SA + E A K E R+A+E E Sbjct: 181 AKRRAEEDARRA-KEREESARRQAE-----------EEARLKAEAEARRKAEE-----EA 223 Query: 153 SVRWTTPEGERERRDWSSP 97 + R PE ERRD + P Sbjct: 224 AKRMPQPEARSERRDDARP 242
>IF2_BRUA2 (Q2YQR7) Translation initiation factor IF-2| Length = 959 Score = 29.3 bits (64), Expect = 4.6 Identities = 27/79 (34%), Positives = 34/79 (43%) Frame = -1 Query: 333 AKKRSEESGLLAWKEAERSANSRRSWGRWRSVLEWSEVASKKTRTE*GREADERKRVTEV 154 AK+R+EE A KE E SA + E A K E R+A+E E Sbjct: 181 AKRRAEEDARRA-KEREESARRQAE-----------EEARLKAEAEARRKAEE-----EA 223 Query: 153 SVRWTTPEGERERRDWSSP 97 + R PE ERRD + P Sbjct: 224 AKRMPQPEARSERRDDARP 242
>SAS10_HUMAN (Q9NQZ2) Something about silencing protein 10 (Disrupter of| silencing SAS10) (Charged amino acid-rich leucine zipper 1) Length = 479 Score = 28.9 bits (63), Expect = 6.0 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 6/72 (8%) Frame = -1 Query: 354 DSENSMSAKKRSEES------GLLAWKEAERSANSRRSWGRWRSVLEWSEVASKKTRTE* 193 D E+ +A + EE G EAE S + SWG+ + + ++ SK + Sbjct: 91 DDEDGGNAGEEEEEENADDDGGSSVQSEAEASVDPSLSWGQRKKLYYDTDYGSKSRGRQS 150 Query: 192 GREADERKRVTE 157 +EA+E +R E Sbjct: 151 QQEAEEEEREEE 162
>T232_BACTB (Q99335) Transposase for insertion sequence element IS232| Length = 431 Score = 28.5 bits (62), Expect = 7.9 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%) Frame = -1 Query: 180 DERKRVTE---VSVRWTTPEGERERRDWSSPTR 91 DE KR+ V VR+ TP GE+ + DW R Sbjct: 125 DEGKRILSGHSVGVRYETPPGEQAQLDWKESIR 157
>CVCA_PEA (P13915) Convicilin precursor| Length = 571 Score = 28.5 bits (62), Expect = 7.9 Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 1/56 (1%) Frame = -1 Query: 255 GRWRSVLEWSEVASKKTRTE*GREADERKRVTEVSVRWTTPEGERE-RRDWSSPTR 91 G WR E E +K + RE E+K V RW E E + +W R Sbjct: 57 GEWRPSYEKEEHEEEKQKYRYQREKKEQKEVQPGRERWEREEDEEQVEEEWRGSQR 112 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.312 0.131 0.430 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,085,730 Number of Sequences: 219361 Number of extensions: 365015 Number of successful extensions: 1141 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1122 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1140 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)
