>RFXK_HUMAN (O14593) DNA-binding protein RFXANK (Regulatory factor X subunit B)|
           (RFX-B) (Ankyrin repeat family A protein 1)
          Length = 260

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
 Frame = +3

Query: 24  TTLSLLAPCTPWTTEPVPDSP-------SHHM*ATLQQERQRGAELSCLLACL 161
           T +  L PCTP    P PD+        S    +T    RQRG E+S L A L
Sbjct: 37  TVVLSLFPCTPEPVNPEPDASVSSPQAGSSLKHSTTLTNRQRGNEVSALPATL 89

>MYG1_HUMAN (Q9HB07) MYG1 protein|
          Length = 376

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
 Frame = -3

Query: 192 RQLHTHTQPNPSKQASKITLPLSVFLVVGWLTCDARVSQALARSSMEYTE-----LGERE 28
           R L   + P P +  SK+  P  +    G   CD  ++ AL R   EY +       + E
Sbjct: 24  RMLGPESVPPPKRSRSKLMAPPRIGTHNGTFHCDEALACALLRLLPEYRDAEIVRTRDPE 83

Query: 27  WLASCAMI 4
            LASC ++
Sbjct: 84  KLASCDIV 91

>YFIO_ECOLI (P0AC02) UPF0169 lipoprotein yfiO precursor|
          Length = 245

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 27  TLSLLAPCTPWTTEPVPDSPSHHM*ATLQQERQRG 131
           TLSL       + E VPD+P + + AT QQ+ Q G
Sbjct: 12  TLSLFLAGCSGSKEEVPDNPPNEIYATAQQKLQDG 46

>YFIO_ECOL6 (P0AC03) UPF0169 lipoprotein yfiO precursor|
          Length = 245

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 27  TLSLLAPCTPWTTEPVPDSPSHHM*ATLQQERQRG 131
           TLSL       + E VPD+P + + AT QQ+ Q G
Sbjct: 12  TLSLFLAGCSGSKEEVPDNPPNEIYATAQQKLQDG 46

>YFIO_ECO57 (P0AC04) UPF0169 lipoprotein yfiO precursor|
          Length = 245

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 27  TLSLLAPCTPWTTEPVPDSPSHHM*ATLQQERQRG 131
           TLSL       + E VPD+P + + AT QQ+ Q G
Sbjct: 12  TLSLFLAGCSGSKEEVPDNPPNEIYATAQQKLQDG 46


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,527,805
Number of Sequences: 219361
Number of extensions: 548006
Number of successful extensions: 1707
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1707
length of database: 80,573,946
effective HSP length: 40
effective length of database: 71,799,506
effective search space used: 1723188144
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)