| Clone Name | bast46h11 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ATG11_ASPFU (Q4WY31) Autophagy-related protein 11 | 31 | 1.2 | 2 | INADL_MOUSE (Q63ZW7) InaD-like protein (Inadl protein) (Pals1-as... | 30 | 2.7 |
|---|
>ATG11_ASPFU (Q4WY31) Autophagy-related protein 11| Length = 1264 Score = 31.2 bits (69), Expect = 1.2 Identities = 17/31 (54%), Positives = 20/31 (64%) Frame = +1 Query: 208 GRARRRSDLESLPAPPMFTFPFL*RPSPPDE 300 G R + LES+PAP + FPFL RPS P E Sbjct: 139 GWQRALTTLESIPAPKV--FPFLGRPSTPKE 167
>INADL_MOUSE (Q63ZW7) InaD-like protein (Inadl protein) (Pals1-associated tight| junction protein) (Protein associated to tight junctions) (Channel-interacting PDZ domain-containing protein) Length = 1834 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/29 (51%), Positives = 18/29 (62%) Frame = -1 Query: 282 PSEEGEGKHGRCGEAL*IGSATSSSQDQG 196 PS EG G+HGR + + S TSSS D G Sbjct: 964 PSSEGNGQHGRFDDMGHLHSLTSSSLDLG 992 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,997,795 Number of Sequences: 219361 Number of extensions: 765438 Number of successful extensions: 2311 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2212 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2309 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)