ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast46h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY596566.1| Saccharum officinarum clone SCJFLR1074C07, comple... 268 1e-68
2dbj|AK121673.1| Oryza sativa (japonica cultivar-group) cDNA clon... 262 8e-67
3gb|AY103657.1| Zea mays PCO102715 mRNA sequence 262 8e-67
4ref|XM_462684.1| Oryza sativa (japonica cultivar-group), predic... 240 3e-60
5ref|XM_473739.1| Oryza sativa (japonica cultivar-group), predic... 240 3e-60
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 176 4e-41
7emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4,... 176 4e-41
8gb|AC116367.10| Oryza sativa (japonica cultivar-group) chromosom... 46 0.089
9emb|CR956404.10| Pig DNA sequence from clone PigE-75D22 on chrom... 46 0.089
10dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.089
11gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 46 0.089
12gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.089
13emb|CT009685.18| Pig DNA sequence from clone CH242-172A22 on chr... 46 0.089
14gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 44 0.35
15gb|AC136223.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
16gb|AC135420.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
17gb|BC073149.1| Homo sapiens cDNA clone IMAGE:5764805, partial cds 42 1.4
18gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 42 1.4
19gb|BC063459.1| Homo sapiens cDNA clone IMAGE:5180482, partial cds 42 1.4
20gb|BC048429.1| Homo sapiens cDNA clone IMAGE:5275617, **** WARNI... 42 1.4
21gb|BC110996.1| Homo sapiens CXYorf1-related protein, mRNA (cDNA ... 42 1.4
22gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 1.4
23emb|AL662945.3|OSJN00141 Oryza sativa genomic DNA, chromosome 4,... 42 1.4
24gb|AC160393.2| Mus musculus BAC clone RP23-136M3 from chromosome... 42 1.4
25dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
26dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
27gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.4
28dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
29dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
30emb|AL078621.19|HSA395L14 Human DNA sequence from clone RP11-395... 42 1.4
31emb|BX537637.1|HSM806439 Homo sapiens mRNA; cDNA DKFZp686C24272 ... 42 1.4
32dbj|D84678.1| Triticum aestivum mRNA for omega-3 fatty acid desa... 42 1.4
33gb|AC154521.2| Mus musculus BAC clone RP23-473O6 from chromosome... 40 5.5
34ref|NM_194920.1| Oryza sativa (japonica cultivar-group) putative... 40 5.5
35gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 5.5
36ref|NM_190357.1| Oryza sativa (japonica cultivar-group), predic... 40 5.5
37gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genom... 40 5.5
38gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
39ref|XM_366890.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 40 5.5
40gb|AC132490.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
41gb|AY356020.1| Canis familiaris isolate cOR12J1 olfactory recept... 40 5.5
42gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.5
43ref|XM_548814.2| PREDICTED: Canis familiaris cOR12J1 olfactory r... 40 5.5
44ref|XM_747071.1| Aspergillus fumigatus Af293 glutamate/leucine/p... 40 5.5
45emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete ch... 40 5.5
46emb|AL606682.3|OSJN00085 Oryza sativa genomic DNA, chromosome 4,... 40 5.5
47emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4,... 40 5.5
48gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
49gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequ... 40 5.5
50gb|AC034204.6| Homo sapiens chromosome 5 clone CTB-192J21, compl... 40 5.5
51gb|AC034243.7| Homo sapiens chromosome 5 clone RP1-204O11, compl... 40 5.5
52dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
53dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
54dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
55dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
56gb|AC134239.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
57gb|AC027689.10|AC027689 Homo sapiens chromosome 18 clone RP11-24... 40 5.5
58dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
59dbj|AP003302.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
60dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.5
61emb|AJ011077.1|HSA011077 Homo sapiens alphaE-catenin gene, 5'UTR 40 5.5
62dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.5
63dbj|AP002867.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
64dbj|AP003338.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
65dbj|AK109045.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
66gb|AY786992.1| Azospirillum lipoferum nitrogenase subunit NifH (... 40 5.5
67emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 5.5
68dbj|AK058898.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
69gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
70gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
71emb|AL772419.4|CNS08C9X Oryza sativa chromosome 12, . BAC OJ1115... 40 5.5
72emb|AL731630.2|OSJN00273 Oryza sativa genomic DNA, chromosome 4,... 40 5.5
73emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4,... 40 5.5
74emb|AL935139.9| Mouse DNA sequence from clone RP23-74F20 on chro... 40 5.5
75dbj|AB034704.1| Rubrivivax gelatinosus photosynthetic gene clust... 40 5.5
76dbj|AP005120.2| Homo sapiens genomic DNA, chromosome 18p clone:R... 40 5.5 
>gb|AY596566.1| Saccharum officinarum clone SCJFLR1074C07, complete sequence
          Length = 908

 Score =  268 bits (135), Expect = 1e-68
 Identities = 233/266 (87%), Gaps = 6/266 (2%)
 Strand = Plus / Plus

                                                                       
Query: 118 ctttgcatggcagcagtggctacctccaaggggcgggtgatcgctgggagcctcgtcgcg 177
           ||||||||||||||||  |||| |||||||||||||| ||||||||| ||| |||||   
Sbjct: 125 ctttgcatggcagcagcagctagctccaaggggcgggcgatcgctggaagcttcgtcagc 184

                                                                       
Query: 178 cgcgtcctcgccggcaaggccgccaacgcctccccgaggagggcggtgcacgcgtcggcc 237
           |||||||| |||||||||||||||      |||||||||||||| |||||||| ||||| 
Sbjct: 185 cgcgtcctggccggcaaggccgcc------tccccgaggagggccgtgcacgcctcggcg 238

                                                                       
Query: 238 tacgacaagaacgtggacgagcaggtgcgcccggccttcgtgccggacgatgtgatcggc 297
           |||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 239 tacgacaagaacctggaggagcaggtgcgcccggcgttcgtgccggacgatgtgatcggc 298

                                                                       
Query: 298 ggcgccgggagcccagacaagtactggggccctcacccgaccaccggcgtcttcggcccg 357
           |||||||||| ||| |||||||||||| |||| ||||| || |||||||| || ||||||
Sbjct: 299 ggcgccgggaaccccgacaagtactggagcccgcaccccacgaccggcgtgtttggcccg 358

                                     
Query: 358 gccgcggtcgaccccaagctgtccgc 383
           || ||||| |||||||||||| ||||
Sbjct: 359 gcggcggtggaccccaagctggccgc 384
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>dbj|AK121673.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068C09, full
           insert sequence
          Length = 787

 Score =  262 bits (132), Expect = 8e-67
 Identities = 230/263 (87%), Gaps = 6/263 (2%)
 Strand = Plus / Plus

                                                                       
Query: 113 tcgacctttgcatggcagcagtggctacctccaaggggcgggtgatcgctgggagcctcg 172
           |||||||||||||||||||||| |||| |||||||||||||||||||||||| ||| |||
Sbjct: 160 tcgacctttgcatggcagcagtagctagctccaaggggcgggtgatcgctggaagcttcg 219

                                                                       
Query: 173 tcgcgcgcgtcctcgccggcaaggccgccaacgcctccccgaggagggcggtgcacgcgt 232
           |||| |||||||| |||||||||||||||      |||||||||||    |||  ||| |
Sbjct: 220 tcgcccgcgtcctggccggcaaggccgcc------tccccgaggagatttgtgagcgctt 273

                                                                       
Query: 233 cggcctacgacaagaacgtggacgagcaggtgcgcccggccttcgtgccggacgatgtga 292
           | |||||||||||||||||||| |||||||||||||||||  | ||||||||||||||||
Sbjct: 274 cagcctacgacaagaacgtggaagagcaggtgcgcccggcggtggtgccggacgatgtga 333

                                                                       
Query: 293 tcggcggcgccgggagcccagacaagtactggggccctcacccgaccaccggcgtcttcg 352
           ||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 334 tcggcagcgtcgggagccctgacaagtactggggccctcacccgaccaccggcgtgttcg 393

                                  
Query: 353 gcccggccgcggtcgaccccaag 375
           | || || ||||| ||| |||||
Sbjct: 394 ggccagcggcggtggacgccaag 416
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>gb|AY103657.1| Zea mays PCO102715 mRNA sequence
          Length = 859

 Score =  262 bits (132), Expect = 8e-67
 Identities = 236/271 (87%), Gaps = 6/271 (2%)
 Strand = Plus / Plus

                                                                       
Query: 113 tcgacctttgcatggcagcagtggctacctccaaggggcgggtgatcgctgggagcctcg 172
           |||| ||||||||||||||||  |||  |||||||||||||| ||||||||| ||| |||
Sbjct: 110 tcgatctttgcatggcagcagcagctggctccaaggggcgggcgatcgctggaagcttcg 169

                                                                       
Query: 173 tcgcgcgcgtcctcgccggcaaggccgccaacgcctccccgaggagggcggtgcacgcgt 232
           ||   ||||||||||||||||||||||||      || ||||||||||| |||||||| |
Sbjct: 170 tcagccgcgtcctcgccggcaaggccgcc------tcgccgaggagggccgtgcacgcct 223

                                                                       
Query: 233 cggcctacgacaagaacgtggacgagcaggtgcgcccggccttcgtgccggacgatgtga 292
           |||| |||||||||||| |||| || |||||||||||||| |||||||||||||||||||
Sbjct: 224 cggcgtacgacaagaacctggaggaccaggtgcgcccggcgttcgtgccggacgatgtga 283

                                                                       
Query: 293 tcggcggcgccgggagcccagacaagtactggggccctcacccgaccaccggcgtcttcg 352
           ||||| ||||||||||||| |||||||||||| |||| ||||| |  |||||||||||||
Sbjct: 284 tcggcagcgccgggagccccgacaagtactggagcccccaccccaagaccggcgtcttcg 343

                                          
Query: 353 gcccggccgcggtcgaccccaagctgtccgc 383
           ||||||| ||||| |||||||||||| ||||
Sbjct: 344 gcccggcggcggtggaccccaagctggccgc 374
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>ref|XM_462684.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 360

 Score =  240 bits (121), Expect = 3e-60
 Identities = 219/252 (86%), Gaps = 6/252 (2%)
 Strand = Plus / Plus

                                                                       
Query: 124 atggcagcagtggctacctccaaggggcgggtgatcgctgggagcctcgtcgcgcgcgtc 183
           ||||||||||| |||| |||||||||||||||||||||||| ||| ||||||| ||||||
Sbjct: 1   atggcagcagtagctagctccaaggggcgggtgatcgctggaagcttcgtcgcccgcgtc 60

                                                                       
Query: 184 ctcgccggcaaggccgccaacgcctccccgaggagggcggtgcacgcgtcggcctacgac 243
           || |||||||||||||||      |||||||||||    |||  ||| || |||||||||
Sbjct: 61  ctggccggcaaggccgcc------tccccgaggagatttgtgagcgcttcagcctacgac 114

                                                                       
Query: 244 aagaacgtggacgagcaggtgcgcccggccttcgtgccggacgatgtgatcggcggcgcc 303
           ||||||||||| |||||||||||||||||  | ||||||||||||||||||||| ||| |
Sbjct: 115 aagaacgtggaagagcaggtgcgcccggcggtggtgccggacgatgtgatcggcagcgtc 174

                                                                       
Query: 304 gggagcccagacaagtactggggccctcacccgaccaccggcgtcttcggcccggccgcg 363
           |||||||| ||||||||||||||||||||||||||||||||||| ||||| || || |||
Sbjct: 175 gggagccctgacaagtactggggccctcacccgaccaccggcgtgttcgggccagcggcg 234

                       
Query: 364 gtcgaccccaag 375
           || ||| |||||
Sbjct: 235 gtggacgccaag 246
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>ref|XM_473739.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 360

 Score =  240 bits (121), Expect = 3e-60
 Identities = 219/252 (86%), Gaps = 6/252 (2%)
 Strand = Plus / Plus

                                                                       
Query: 124 atggcagcagtggctacctccaaggggcgggtgatcgctgggagcctcgtcgcgcgcgtc 183
           ||||||||||| |||| |||||||||||||||||||||||| ||| ||||||| ||||||
Sbjct: 1   atggcagcagtagctagctccaaggggcgggtgatcgctggaagcttcgtcgcccgcgtc 60

                                                                       
Query: 184 ctcgccggcaaggccgccaacgcctccccgaggagggcggtgcacgcgtcggcctacgac 243
           || |||||||||||||||      |||||||||||    |||  ||| || |||||||||
Sbjct: 61  ctggccggcaaggccgcc------tccccgaggagatttgtgagcgcttcagcctacgac 114

                                                                       
Query: 244 aagaacgtggacgagcaggtgcgcccggccttcgtgccggacgatgtgatcggcggcgcc 303
           ||||||||||| |||||||||||||||||  | ||||||||||||||||||||| ||| |
Sbjct: 115 aagaacgtggaagagcaggtgcgcccggcggtggtgccggacgatgtgatcggcagcgtc 174

                                                                       
Query: 304 gggagcccagacaagtactggggccctcacccgaccaccggcgtcttcggcccggccgcg 363
           |||||||| ||||||||||||||||||||||||||||||||||| ||||| || || |||
Sbjct: 175 gggagccctgacaagtactggggccctcacccgaccaccggcgtgttcgggccagcggcg 234

                       
Query: 364 gtcgaccccaag 375
           || ||| |||||
Sbjct: 235 gtggacgccaag 246
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  176 bits (89), Expect = 4e-41
 Identities = 128/141 (90%)
 Strand = Plus / Minus

                                                                            
Query: 235      gcctacgacaagaacgtggacgagcaggtgcgcccggccttcgtgccggacgatgtgatc 294
                |||||||||||||||||||| |||||||||||||||||  | ||||||||||||||||||
Sbjct: 30206683 gcctacgacaagaacgtggaagagcaggtgcgcccggcggtggtgccggacgatgtgatc 30206624

                                                                            
Query: 295      ggcggcgccgggagcccagacaagtactggggccctcacccgaccaccggcgtcttcggc 354
                ||| ||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||| 
Sbjct: 30206623 ggcagcgtcgggagccctgacaagtactggggccctcacccgaccaccggcgtgttcggg 30206564

                                     
Query: 355      ccggccgcggtcgaccccaag 375
                || || ||||| ||| |||||
Sbjct: 30206563 ccagcggcggtggacgccaag 30206543



 Score =  129 bits (65), Expect = 8e-27
 Identities = 83/89 (93%)
 Strand = Plus / Minus

                                                                            
Query: 113      tcgacctttgcatggcagcagtggctacctccaaggggcgggtgatcgctgggagcctcg 172
                |||||||||||||||||||||| |||| |||||||||||||||||||||||| ||| |||
Sbjct: 30208073 tcgacctttgcatggcagcagtagctagctccaaggggcgggtgatcgctggaagcttcg 30208014

                                             
Query: 173      tcgcgcgcgtcctcgccggcaaggccgcc 201
                |||| |||||||| |||||||||||||||
Sbjct: 30208013 tcgcccgcgtcctggccggcaaggccgcc 30207985



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 146      aggggcgggtgatcgctggga 166
                |||||||||||||||||||||
Sbjct: 20487152 aggggcgggtgatcgctggga 20487132



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 146      aggggcgggtgatcgctggg 165
                ||||||||||||||||||||
Sbjct: 28330381 aggggcgggtgatcgctggg 28330362



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 282      ggacgatgtgatcggcggcg 301
                ||||||||||||||||||||
Sbjct: 27896412 ggacgatgtgatcggcggcg 27896393



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 146      aggggcgggtgatcgctggg 165
                ||||||||||||||||||||
Sbjct: 25740741 aggggcgggtgatcgctggg 25740722
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>emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNba0093F12,
              complete sequence
          Length = 186142

 Score =  176 bits (89), Expect = 4e-41
 Identities = 128/141 (90%)
 Strand = Plus / Minus

                                                                          
Query: 235    gcctacgacaagaacgtggacgagcaggtgcgcccggccttcgtgccggacgatgtgatc 294
              |||||||||||||||||||| |||||||||||||||||  | ||||||||||||||||||
Sbjct: 102974 gcctacgacaagaacgtggaagagcaggtgcgcccggcggtggtgccggacgatgtgatc 102915

                                                                          
Query: 295    ggcggcgccgggagcccagacaagtactggggccctcacccgaccaccggcgtcttcggc 354
              ||| ||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||| 
Sbjct: 102914 ggcagcgtcgggagccctgacaagtactggggccctcacccgaccaccggcgtgttcggg 102855

                                   
Query: 355    ccggccgcggtcgaccccaag 375
              || || ||||| ||| |||||
Sbjct: 102854 ccagcggcggtggacgccaag 102834



 Score =  129 bits (65), Expect = 8e-27
 Identities = 83/89 (93%)
 Strand = Plus / Minus

                                                                          
Query: 113    tcgacctttgcatggcagcagtggctacctccaaggggcgggtgatcgctgggagcctcg 172
              |||||||||||||||||||||| |||| |||||||||||||||||||||||| ||| |||
Sbjct: 104364 tcgacctttgcatggcagcagtagctagctccaaggggcgggtgatcgctggaagcttcg 104305

                                           
Query: 173    tcgcgcgcgtcctcgccggcaaggccgcc 201
              |||| |||||||| |||||||||||||||
Sbjct: 104304 tcgcccgcgtcctggccggcaaggccgcc 104276
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>gb|AC116367.10| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0059H21 map R3342S, complete sequence
          Length = 133790

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 146   aggggcgggtgatcgctgggagc 168
             |||||||||||||||||||||||
Sbjct: 37556 aggggcgggtgatcgctgggagc 37578
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>emb|CR956404.10| Pig DNA sequence from clone PigE-75D22 on chromosome 17, complete
              sequence
          Length = 135396

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 380    ccgccagcctcgcggcgccggcc 402
              |||||||||||||||||||||||
Sbjct: 131232 ccgccagcctcgcggcgccggcc 131210
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 146      aggggcgggtgatcgctgggagc 168
                |||||||||||||||||||||||
Sbjct: 27808116 aggggcgggtgatcgctgggagc 27808094
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 278     tgccggacgatgtgatcggcggcgccg 304
               |||||| ||||||||||||||||||||
Sbjct: 2728196 tgccggccgatgtgatcggcggcgccg 2728170
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 146      aggggcgggtgatcgctgggagc 168
                |||||||||||||||||||||||
Sbjct: 27832104 aggggcgggtgatcgctgggagc 27832082
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>emb|CT009685.18| Pig DNA sequence from clone CH242-172A22 on chromosome 17, complete
             sequence
          Length = 130271

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 380   ccgccagcctcgcggcgccggcc 402
             |||||||||||||||||||||||
Sbjct: 43532 ccgccagcctcgcggcgccggcc 43554
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 349     ttcggcccggccgcggtcgaccccaagctg 378
               ||||| ||||||| ||||||||||||||||
Sbjct: 4607285 ttcggaccggccgtggtcgaccccaagctg 4607314
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>gb|AC136223.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0093E24, complete sequence
          Length = 146492

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 148  gggcgggtgatcgctgggagc 168
            |||||||||||||||||||||
Sbjct: 1290 gggcgggtgatcgctgggagc 1270
to top
>gb|AC135420.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0060G17,
              complete sequence
          Length = 174949

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 148    gggcgggtgatcgctgggagc 168
              |||||||||||||||||||||
Sbjct: 168648 gggcgggtgatcgctgggagc 168628
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>gb|BC073149.1| Homo sapiens cDNA clone IMAGE:5764805, partial cds
          Length = 1498

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 371 ccaagctgtccgccagcctcg 391
           |||||||||||||||||||||
Sbjct: 126 ccaagctgtccgccagcctcg 106
to top
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 285     cgatgtgatcggcggcgccgg 305
               |||||||||||||||||||||
Sbjct: 2489160 cgatgtgatcggcggcgccgg 2489140
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>gb|BC063459.1| Homo sapiens cDNA clone IMAGE:5180482, partial cds
          Length = 2281

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 371 ccaagctgtccgccagcctcg 391
           |||||||||||||||||||||
Sbjct: 248 ccaagctgtccgccagcctcg 228
to top
>gb|BC048429.1| Homo sapiens cDNA clone IMAGE:5275617, **** WARNING: chimeric clone
           ****
          Length = 1917

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 371 ccaagctgtccgccagcctcg 391
           |||||||||||||||||||||
Sbjct: 127 ccaagctgtccgccagcctcg 147
to top
>gb|BC110996.1| Homo sapiens CXYorf1-related protein, mRNA (cDNA clone MGC:117230
           IMAGE:5727838), complete cds
          Length = 2080

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 371 ccaagctgtccgccagcctcg 391
           |||||||||||||||||||||
Sbjct: 154 ccaagctgtccgccagcctcg 134
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 285     cgatgtgatcggcggcgccgg 305
               |||||||||||||||||||||
Sbjct: 2263285 cgatgtgatcggcggcgccgg 2263305
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>emb|AL662945.3|OSJN00141 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000126_13, complete
              sequence
          Length = 113960

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 146    aggggcgggtgatcgctggga 166
              |||||||||||||||||||||
Sbjct: 100572 aggggcgggtgatcgctggga 100552
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>gb|AC160393.2| Mus musculus BAC clone RP23-136M3 from chromosome 12, complete sequence
          Length = 215692

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 65    agcagagcagaggctctccct 85
             |||||||||||||||||||||
Sbjct: 40237 agcagagcagaggctctccct 40217
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 148     gggcgggtgatcgctgggagc 168
               |||||||||||||||||||||
Sbjct: 8079057 gggcgggtgatcgctgggagc 8079037



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 146      aggggcgggtgatcgctggg 165
                ||||||||||||||||||||
Sbjct: 14002822 aggggcgggtgatcgctggg 14002803
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 148      gggcgggtgatcgctgggagc 168
                |||||||||||||||||||||
Sbjct: 31044153 gggcgggtgatcgctgggagc 31044133
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 392     cggcgccggccagcgccgcga 412
               |||||||||||||||||||||
Sbjct: 2780199 cggcgccggccagcgccgcga 2780219
to top
>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0516G10
          Length = 148937

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 148   gggcgggtgatcgctgggagc 168
             |||||||||||||||||||||
Sbjct: 99109 gggcgggtgatcgctgggagc 99089
to top
>dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0585G03
          Length = 173649

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 148   gggcgggtgatcgctgggagc 168
             |||||||||||||||||||||
Sbjct: 33377 gggcgggtgatcgctgggagc 33357
to top
>emb|AL078621.19|HSA395L14 Human DNA sequence from clone RP11-395L14. Contains (part of) up to six
             novel genes or pseudogenes, the gene for a novel forkhead
             protein similar to FOXD4 (forkhead box D4, FREAC5), the
             gene for a novel phosphoglucomutase like protein, a
             pseudogene similar to part of DEAD/H (Asp-Glu-Ala-Asp/His)
             box (S.cerevisiae CHL1-like helicase), an RPL23A (60S
             ribosomal protein L23A) pseudogene, the RABL2A gene for
             RAB-like 2A, the gene for a novel protein similar to small
             nuclear ribonucleoprotein polypeptide A' (SNRPA1) and the
             3' part of the gene for a novel protein similar to acrosin
             (ACR). Contains ESTs, STSs, GSSs and nine putative CpG
             islands, complete sequence
          Length = 176734

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 371   ccaagctgtccgccagcctcg 391
             |||||||||||||||||||||
Sbjct: 89414 ccaagctgtccgccagcctcg 89394
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>emb|BX537637.1|HSM806439 Homo sapiens mRNA; cDNA DKFZp686C24272 (from clone DKFZp686C24272)
          Length = 1614

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 371 ccaagctgtccgccagcctcg 391
           |||||||||||||||||||||
Sbjct: 130 ccaagctgtccgccagcctcg 110
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>dbj|D84678.1| Triticum aestivum mRNA for omega-3 fatty acid desaturase, complete
           cds
          Length = 1590

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 374 agctgtccgccagcctcgcggcgccggccagcgccgc 410
           ||||||| ||| ||| ||||||| |||||||||||||
Sbjct: 357 agctgtcggcccgccacgcggcggcggccagcgccgc 321
to top
>gb|AC154521.2| Mus musculus BAC clone RP23-473O6 from chromosome 13, complete sequence
          Length = 211603

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    catggcagcagtggctacct 142
              ||||||||||||||||||||
Sbjct: 144067 catggcagcagtggctacct 144086
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>ref|NM_194920.1| Oryza sativa (japonica cultivar-group) putative cyclophilin
           (OSJNAa0034B05.5), mRNA
          Length = 546

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 386 gcctcgcggcgccggccagcgccg 409
           |||||||||||||| |||||||||
Sbjct: 295 gcctcgcggcgccgtccagcgccg 272
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 384     cagcctcgcggcgccggccagcgccgcg 411
               |||| ||||||| |||||||||||||||
Sbjct: 2915216 cagcgtcgcggccccggccagcgccgcg 2915243
to top
>ref|NM_190357.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3099

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 282  ggacgatgtgatcggcggcg 301
            ||||||||||||||||||||
Sbjct: 2980 ggacgatgtgatcggcggcg 2961
to top
>gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete
             sequence
          Length = 132981

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   aggggcgggtgatcgctggg 165
             ||||||||||||||||||||
Sbjct: 45977 aggggcgggtgatcgctggg 45958
to top
>gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
            OSJNBa0004E08, complete sequence
          Length = 158294

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 386  gcctcgcggcgccggccagcgccg 409
            |||||||||||||| |||||||||
Sbjct: 9025 gcctcgcggcgccgtccagcgccg 9002
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>ref|XM_366890.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
           (MG02966.4) partial mRNA
          Length = 915

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 100 ctcggcagcaggctcgacctttgc 123
           |||| |||||||||||||||||||
Sbjct: 321 ctcgtcagcaggctcgacctttgc 298
to top
>gb|AC132490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0570A02,
             complete sequence
          Length = 146541

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   aggggcgggtgatcgctggg 165
             ||||||||||||||||||||
Sbjct: 82899 aggggcgggtgatcgctggg 82880
to top
>gb|AY356020.1| Canis familiaris isolate cOR12J1 olfactory receptor family 12
           subfamily J-like gene, partial sequence
          Length = 627

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 392 cggcgccggccagcgccgcg 411
           ||||||||||||||||||||
Sbjct: 346 cggcgccggccagcgccgcg 327
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 146      aggggcgggtgatcgctggg 165
                ||||||||||||||||||||
Sbjct: 18141372 aggggcgggtgatcgctggg 18141353



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 282     ggacgatgtgatcggcggcg 301
               ||||||||||||||||||||
Sbjct: 7511727 ggacgatgtgatcggcggcg 7511746
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>ref|XM_548814.2| PREDICTED: Canis familiaris cOR12J1 olfactory receptor family 12
           subfamily J-like (cOR12J1), mRNA
          Length = 1032

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 392 cggcgccggccagcgccgcg 411
           ||||||||||||||||||||
Sbjct: 535 cggcgccggccagcgccgcg 516
to top
>ref|XM_747071.1| Aspergillus fumigatus Af293 glutamate/leucine/phenylalanine/valine
            dehydrogenase (Afu4g06620) partial mRNA
          Length = 1377

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 188  ccggcaaggccgccaacgcc 207
            ||||||||||||||||||||
Sbjct: 1115 ccggcaaggccgccaacgcc 1134
to top
>emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete chromosome; segment 2/12
          Length = 306650

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 345    cgtcttcggcccggccgcgg 364
              ||||||||||||||||||||
Sbjct: 260106 cgtcttcggcccggccgcgg 260125
to top
>emb|AL606682.3|OSJN00085 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065O17,
             complete sequence
          Length = 167269

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   ggacgatgtgatcggcggcg 301
             ||||||||||||||||||||
Sbjct: 59265 ggacgatgtgatcggcggcg 59246
to top
>emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0070J16,
              complete sequence
          Length = 130718

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 146    aggggcgggtgatcgctggg 165
              ||||||||||||||||||||
Sbjct: 120468 aggggcgggtgatcgctggg 120449
to top
>gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAa0034B05, complete sequence
          Length = 125655

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 386   gcctcgcggcgccggccagcgccg 409
             |||||||||||||| |||||||||
Sbjct: 74680 gcctcgcggcgccgtccagcgccg 74657
to top
>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    ctcgccggcaaggccgccaa 203
              ||||||||||||||||||||
Sbjct: 640698 ctcgccggcaaggccgccaa 640717
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>gb|AC034204.6| Homo sapiens chromosome 5 clone CTB-192J21, complete sequence
          Length = 61027

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 115   gacctttgcatggcagcagtggct 138
             ||||||||| ||||||||||||||
Sbjct: 34610 gacctttgcttggcagcagtggct 34633
to top
>gb|AC034243.7| Homo sapiens chromosome 5 clone RP1-204O11, complete sequence
          Length = 191308

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 115   gacctttgcatggcagcagtggct 138
             ||||||||| ||||||||||||||
Sbjct: 46504 gacctttgcttggcagcagtggct 46527
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 146      aggggcgggtgatcgctggg 165
                ||||||||||||||||||||
Sbjct: 10615810 aggggcgggtgatcgctggg 10615791
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 386     gcctcgcggcgccggccagcgccg 409
               |||||||||||||| |||||||||
Sbjct: 3417896 gcctcgcggcgccgtccagcgccg 3417873
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 146      aggggcgggtgatcgctggg 165
                ||||||||||||||||||||
Sbjct: 18134913 aggggcgggtgatcgctggg 18134894



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 282     ggacgatgtgatcggcggcg 301
               ||||||||||||||||||||
Sbjct: 7509562 ggacgatgtgatcggcggcg 7509581
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 282      ggacgatgtgatcggcggcg 301
                ||||||||||||||||||||
Sbjct: 35034041 ggacgatgtgatcggcggcg 35034022



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 146    aggggcgggtgatcgctggg 165
              ||||||||||||||||||||
Sbjct: 849028 aggggcgggtgatcgctggg 849009
to top
>gb|AC134239.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0042A11, complete sequence
          Length = 113049

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   ggacgatgtgatcggcggcg 301
             ||||||||||||||||||||
Sbjct: 40623 ggacgatgtgatcggcggcg 40642
to top
>gb|AC027689.10|AC027689 Homo sapiens chromosome 18 clone RP11-245A17, complete sequence
          Length = 180573

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   gcgtcggcctacgacaagaa 248
             ||||||||||||||||||||
Sbjct: 81469 gcgtcggcctacgacaagaa 81488
to top
>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0485B12
          Length = 156047

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   ggacgatgtgatcggcggcg 301
             ||||||||||||||||||||
Sbjct: 41191 ggacgatgtgatcggcggcg 41172
to top
>dbj|AP003302.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0703B11
          Length = 144074

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   ggacgatgtgatcggcggcg 301
             ||||||||||||||||||||
Sbjct: 78269 ggacgatgtgatcggcggcg 78250
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 184     ctcgccggcaaggccgccaa 203
               ||||||||||||||||||||
Sbjct: 5153169 ctcgccggcaaggccgccaa 5153188
to top
>emb|AJ011077.1|HSA011077 Homo sapiens alphaE-catenin gene, 5'UTR
          Length = 3405

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 115  gacctttgcatggcagcagtggct 138
            ||||||||| ||||||||||||||
Sbjct: 2626 gacctttgcttggcagcagtggct 2649
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 234     ggcctacgacaagaacgtgg 253
               ||||||||||||||||||||
Sbjct: 4959592 ggcctacgacaagaacgtgg 4959573



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 393     ggcgccggccagcgccgcga 412
               ||||||||||||||||||||
Sbjct: 1300445 ggcgccggccagcgccgcga 1300464
to top
>dbj|AP002867.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0463F06
          Length = 144322

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   aggggcgggtgatcgctggg 165
             ||||||||||||||||||||
Sbjct: 71702 aggggcgggtgatcgctggg 71683
to top
>dbj|AP003338.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OJ1212_B09
          Length = 130728

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 146    aggggcgggtgatcgctggg 165
              ||||||||||||||||||||
Sbjct: 126228 aggggcgggtgatcgctggg 126209
to top
>dbj|AK109045.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-D07, full
           insert sequence
          Length = 1370

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 188 ccggcaaggccgccaacgcc 207
           ||||||||||||||||||||
Sbjct: 952 ccggcaaggccgccaacgcc 971
to top
>gb|AY786992.1| Azospirillum lipoferum nitrogenase subunit NifH (nifH) gene, partial
            cds; DraT (draT), DraG (draG), ArsC, Glutamine
            amidotransferases class-II (YafJ-like), AcpD, nucleoside
            phosphorylase, signal recognition particle GTPase, and
            MiaB (miaB) genes, complete cds; and DapF (dapF) gene,
            partial cds
          Length = 11856

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 389  tcgcggcgccggccagcgcc 408
            ||||||||||||||||||||
Sbjct: 6672 tcgcggcgccggccagcgcc 6653
to top
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 183     cctcgccggcaaggccgcca 202
               ||||||||||||||||||||
Sbjct: 1752178 cctcgccggcaaggccgcca 1752159
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>dbj|AK058898.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-H03, full
           insert sequence
          Length = 927

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 386 gcctcgcggcgccggccagcgccg 409
           |||||||||||||| |||||||||
Sbjct: 417 gcctcgcggcgccgtccagcgccg 394
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 386     gcctcgcggcgccggccagcgccg 409
               |||||||||||||| |||||||||
Sbjct: 3417817 gcctcgcggcgccgtccagcgccg 3417794
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 146      aggggcgggtgatcgctggg 165
                ||||||||||||||||||||
Sbjct: 10615692 aggggcgggtgatcgctggg 10615673
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>emb|AL772419.4|CNS08C9X Oryza sativa chromosome 12, . BAC OJ1115_G02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 112916

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   aggggcgggtgatcgctggg 165
             ||||||||||||||||||||
Sbjct: 79113 aggggcgggtgatcgctggg 79094
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>emb|AL731630.2|OSJN00273 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0072M01,
             complete sequence
          Length = 127712

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   aggggcgggtgatcgctggg 165
             ||||||||||||||||||||
Sbjct: 63667 aggggcgggtgatcgctggg 63648
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>emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0017B10,
              complete sequence
          Length = 150957

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 146    aggggcgggtgatcgctggg 165
              ||||||||||||||||||||
Sbjct: 122689 aggggcgggtgatcgctggg 122670
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>emb|AL935139.9| Mouse DNA sequence from clone RP23-74F20 on chromosome 2, complete
            sequence
          Length = 61467

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 33   ccactcttcttcccccaacc 52
            ||||||||||||||||||||
Sbjct: 2598 ccactcttcttcccccaacc 2617
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>dbj|AB034704.1| Rubrivivax gelatinosus photosynthetic gene cluster, complete cds,
             stain:IL144
          Length = 58996

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 391   gcggcgccggccagcgccgc 410
             ||||||||||||||||||||
Sbjct: 47517 gcggcgccggccagcgccgc 47498
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>dbj|AP005120.2| Homo sapiens genomic DNA, chromosome 18p clone:RP11-513M1, complete
              sequences
          Length = 125561

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 229    gcgtcggcctacgacaagaa 248
              ||||||||||||||||||||
Sbjct: 113470 gcgtcggcctacgacaagaa 113451


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,724,958
Number of Sequences: 3902068
Number of extensions: 2724958
Number of successful extensions: 69568
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66932
Number of HSP's gapped (non-prelim): 2636
length of query: 412
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 390
effective length of database: 17,147,199,772
effective search space: 6687407911080
effective search space used: 6687407911080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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