>CHLP_SYNY3 (Q55087) Geranylgeranyl hydrogenase|
          Length = 407

 Score = 71.6 bits (174), Expect = 4e-13
 Identities = 30/57 (52%), Positives = 43/57 (75%)
 Frame = +2

Query: 209 QAFLLERSPAGAKPCGGAIPLCMLDEFAIPLGLVDRRVTRMRVLSPSNLAADFGRAL 379
           + +L ER    AKPCGGAIPLCM+DEF +P  ++DRRV +M+++SPSN+  + G+ L
Sbjct: 27  ETYLFERKLDNAKPCGGAIPLCMVDEFDLPPEIIDRRVRKMKMISPSNIEVNIGQTL 83

>BCHP_RHOCA (P26172) Geranylgeranyl hydrogenase|
          Length = 391

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 20/49 (40%), Positives = 31/49 (63%)
 Frame = +2

Query: 218 LLERSPAGAKPCGGAIPLCMLDEFAIPLGLVDRRVTRMRVLSPSNLAAD 364
           LL+R+    KPCGGAIP  ++ +F IP  L+  ++T  R++SP+    D
Sbjct: 30  LLDRA-GRIKPCGGAIPPRLIRDFDIPDHLLVAKITSARMISPTGRFVD 77

>RNZ_MYCLE (Q49744) Putative ribonuclease Z (EC 3.1.26.11) (RNase Z) (tRNase|
           Z) (tRNA 3 endonuclease)
          Length = 220

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/56 (26%), Positives = 22/56 (39%)
 Frame = +2

Query: 215 FLLERSPAGAKPCGGAIPLCMLDEFAIPLGLVDRRVTRMRVLSPSNLAADFGRALP 382
           F +E  P      GG +P   LDE A     +   + R  ++   +  AD G   P
Sbjct: 139 FRIESGPTSVVLTGGTVPCASLDELAAEADALVHTIIRKNIVIRVHQQADQGHLQP 194


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.134    0.475 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,720,651
Number of Sequences: 219361
Number of extensions: 306612
Number of successful extensions: 932
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)