| Clone Name | bast46h02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 153 bits (77), Expect = 5e-34 Identities = 152/177 (85%) Strand = Plus / Minus Query: 196 cgcggagctcgccgtcgttcgcgtccgtcctggcgtcgtccgtccggaacccgcggttcc 255 ||||| ||||| ||||||||||||| || ||||||||||||||| |||||||| |||||| Sbjct: 20461987 cgcggggctcgtcgtcgttcgcgtcggtgctggcgtcgtccgtcaggaacccgaggttcc 20461928 Query: 256 tcgggccggccgtggtgcggccgctctgcatcgtcacggcgaccaacgcatcccacgtcc 315 | | ||| | | ||||||||||||||| |||| | | | |||||||| || ||||||| Sbjct: 20461927 tggcgcccggcaccgtgcggccgctctgcgtcgtgaagcccaccaacgcgtcgcacgtcc 20461868 Query: 316 aggccgccgtcgtctgcggccgccggcacggcgtgcgcctccgcgtgcgcagcggcg 372 |||||||||| | ||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 20461867 aggccgccgtgctgtgcggccgccgccacggggtgcgcctccgcgtgcgcagcggcg 20461811 Score = 105 bits (53), Expect = 1e-19 Identities = 89/101 (88%) Strand = Plus / Minus Query: 272 gcggccgctctgcatcgtcacggcgaccaacgcatcccacgtccaggccgccgtcgtctg 331 ||||||| |||| ||| ||||| |||| ||||| |||||||||||||||||||| |||| Sbjct: 20486383 gcggccggtctggatcatcacgccgacgaacgcctcccacgtccaggccgccgtgctctg 20486324 Query: 332 cggccgccggcacggcgtgcgcctccgcgtgcgcagcggcg 372 |||||||||| ||||||| ||||||||| | |||||||||| Sbjct: 20486323 cggccgccggaacggcgtccgcctccgcatccgcagcggcg 20486283 Score = 85.7 bits (43), Expect = 9e-14 Identities = 85/99 (85%) Strand = Plus / Minus Query: 274 ggccgctctgcatcgtcacggcgaccaacgcatcccacgtccaggccgccgtcgtctgcg 333 |||||||||||||||||||| || || |||| || ||||||||||||||||| |||||| Sbjct: 20438095 ggccgctctgcatcgtcacgccggccgacgcgtcgcacgtccaggccgccgtgctctgcg 20438036 Query: 334 gccgccggcacggcgtgcgcctccgcgtgcgcagcggcg 372 ||||| | || ||||||||||||| ||||||||||| Sbjct: 20438035 gccgcgccgagggggtgcgcctccgcgcgcgcagcggcg 20437997 Score = 83.8 bits (42), Expect = 4e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 275 gccgctctgcatcgtcacggcgaccaacgcatcccacgtccaggccgccgtcgtctgcgg 334 |||||| |||||||||| ||||| || | |||||| |||||||||||||||||||||| Sbjct: 20466048 gccgctgtgcatcgtcatggcgaagaagacctcccacatccaggccgccgtcgtctgcgg 20465989 Query: 335 ccgccggcacggcgtgcgcctccgcgtgcgcagcggcg 372 ||||||||| | || ||| |||||| ||||||||||| Sbjct: 20465988 ccgccggcatcgtgtccgcgtccgcgcgcgcagcggcg 20465951 Score = 48.1 bits (24), Expect = 0.020 Identities = 39/44 (88%) Strand = Plus / Minus Query: 329 ctgcggccgccggcacggcgtgcgcctccgcgtgcgcagcggcg 372 |||||||||||| ||| ||| ||| |||||||||||||||||| Sbjct: 20421550 ctgcggccgccgccacaacgtccgcatccgcgtgcgcagcggcg 20421507
>dbj|AP003686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0659D09 Length = 168253 Score = 153 bits (77), Expect = 5e-34 Identities = 152/177 (85%) Strand = Plus / Minus Query: 196 cgcggagctcgccgtcgttcgcgtccgtcctggcgtcgtccgtccggaacccgcggttcc 255 ||||| ||||| ||||||||||||| || ||||||||||||||| |||||||| |||||| Sbjct: 34282 cgcggggctcgtcgtcgttcgcgtcggtgctggcgtcgtccgtcaggaacccgaggttcc 34223 Query: 256 tcgggccggccgtggtgcggccgctctgcatcgtcacggcgaccaacgcatcccacgtcc 315 | | ||| | | ||||||||||||||| |||| | | | |||||||| || ||||||| Sbjct: 34222 tggcgcccggcaccgtgcggccgctctgcgtcgtgaagcccaccaacgcgtcgcacgtcc 34163 Query: 316 aggccgccgtcgtctgcggccgccggcacggcgtgcgcctccgcgtgcgcagcggcg 372 |||||||||| | ||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 34162 aggccgccgtgctgtgcggccgccgccacggggtgcgcctccgcgtgcgcagcggcg 34106 Score = 105 bits (53), Expect = 1e-19 Identities = 89/101 (88%) Strand = Plus / Minus Query: 272 gcggccgctctgcatcgtcacggcgaccaacgcatcccacgtccaggccgccgtcgtctg 331 ||||||| |||| ||| ||||| |||| ||||| |||||||||||||||||||| |||| Sbjct: 58678 gcggccggtctggatcatcacgccgacgaacgcctcccacgtccaggccgccgtgctctg 58619 Query: 332 cggccgccggcacggcgtgcgcctccgcgtgcgcagcggcg 372 |||||||||| ||||||| ||||||||| | |||||||||| Sbjct: 58618 cggccgccggaacggcgtccgcctccgcatccgcagcggcg 58578 Score = 85.7 bits (43), Expect = 9e-14 Identities = 85/99 (85%) Strand = Plus / Minus Query: 274 ggccgctctgcatcgtcacggcgaccaacgcatcccacgtccaggccgccgtcgtctgcg 333 |||||||||||||||||||| || || |||| || ||||||||||||||||| |||||| Sbjct: 10390 ggccgctctgcatcgtcacgccggccgacgcgtcgcacgtccaggccgccgtgctctgcg 10331 Query: 334 gccgccggcacggcgtgcgcctccgcgtgcgcagcggcg 372 ||||| | || ||||||||||||| ||||||||||| Sbjct: 10330 gccgcgccgagggggtgcgcctccgcgcgcgcagcggcg 10292 Score = 83.8 bits (42), Expect = 4e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 275 gccgctctgcatcgtcacggcgaccaacgcatcccacgtccaggccgccgtcgtctgcgg 334 |||||| |||||||||| ||||| || | |||||| |||||||||||||||||||||| Sbjct: 38343 gccgctgtgcatcgtcatggcgaagaagacctcccacatccaggccgccgtcgtctgcgg 38284 Query: 335 ccgccggcacggcgtgcgcctccgcgtgcgcagcggcg 372 ||||||||| | || ||| |||||| ||||||||||| Sbjct: 38283 ccgccggcatcgtgtccgcgtccgcgcgcgcagcggcg 38246
>dbj|AK073505.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046H14, full insert sequence Length = 1813 Score = 153 bits (77), Expect = 5e-34 Identities = 152/177 (85%) Strand = Plus / Plus Query: 196 cgcggagctcgccgtcgttcgcgtccgtcctggcgtcgtccgtccggaacccgcggttcc 255 ||||| ||||| ||||||||||||| || ||||||||||||||| |||||||| |||||| Sbjct: 200 cgcggggctcgtcgtcgttcgcgtcggtgctggcgtcgtccgtcaggaacccgaggttcc 259 Query: 256 tcgggccggccgtggtgcggccgctctgcatcgtcacggcgaccaacgcatcccacgtcc 315 | | ||| | | ||||||||||||||| |||| | | | |||||||| || ||||||| Sbjct: 260 tggcgcccggcaccgtgcggccgctctgcgtcgtgaagcccaccaacgcgtcgcacgtcc 319 Query: 316 aggccgccgtcgtctgcggccgccggcacggcgtgcgcctccgcgtgcgcagcggcg 372 |||||||||| | ||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 320 aggccgccgtgctgtgcggccgccgccacggggtgcgcctccgcgtgcgcagcggcg 376
>dbj|AK109673.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-B05, full insert sequence Length = 1972 Score = 105 bits (53), Expect = 1e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 272 gcggccgctctgcatcgtcacggcgaccaacgcatcccacgtccaggccgccgtcgtctg 331 ||||||| |||| ||| ||||| |||| ||||| |||||||||||||||||||| |||| Sbjct: 289 gcggccggtctggatcatcacgccgacgaacgcctcccacgtccaggccgccgtgctctg 348 Query: 332 cggccgccggcacggcgtgcgcctccgcgtgcgcagcggcg 372 |||||||||| ||||||| ||||||||| | |||||||||| Sbjct: 349 cggccgccggaacggcgtccgcctccgcatccgcagcggcg 389
>gb|AY451241.1| Cynodon dactylon FAD-linked oxidoreductase BG60 mRNA, complete cds Length = 1569 Score = 99.6 bits (50), Expect = 6e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 295 cgaccaacgcatcccacgtccaggccgccgtcgtctgcggccgccggcacggcgtgcgcc 354 |||||||||| |||||| ||||||||||||| || |||||||||||||||||| ||||| Sbjct: 257 cgaccaacgcctcccacatccaggccgccgtggtgtgcggccgccggcacggcatgcgca 316 Query: 355 tccgcgtgcgcagcggcg 372 ||||||||||||| |||| Sbjct: 317 tccgcgtgcgcagtggcg 334
>emb|AJ512487.2|PPR512487 Phleum pratense partial phlp4 gene for pollen allergen Phl p 4, allele A1 Length = 1567 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 275 gccgctctgcatcgtcacggcgaccaacgcatcccacgtccaggccgccgtcgtctgcgg 334 |||| ||| ||||||||| | |||||||| |||||| ||||| ||||||| || ||||| Sbjct: 180 gccgatctacatcgtcacccccaccaacgcctcccacatccagtccgccgtggtgtgcgg 239 Query: 335 ccgccggcacggcgtgcgcctccgcgtgcgcagcggcg 372 |||||||||||| || ||| |||||||||||||||||| Sbjct: 240 ccgccggcacggtgtccgcatccgcgtgcgcagcggcg 277
>emb|AJ862831.1| Secale cereale partial secc4 gene for pollen allergen Sec c 4, allele B Length = 1644 Score = 83.8 bits (42), Expect = 4e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 275 gccgctctgcatcgtcacggcgaccaacgcatcccacgtccaggccgccgtcgtctgcgg 334 |||||||| |||| |||| | |||||||| |||||| ||||| |||| || || ||||| Sbjct: 225 gccgctctacatcatcacccccaccaacgcctcccacatccagtccgcggtggtgtgcgg 284 Query: 335 ccgccggcacggcgtgcgcctccgcgtgcgcagcggcg 372 ||||||||||||||| ||| |||||||||| ||||||| Sbjct: 285 ccgccggcacggcgtccgcatccgcgtgcggagcggcg 322
>gb|AC133608.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0085G12, complete sequence Length = 121470 Score = 79.8 bits (40), Expect = 6e-12 Identities = 79/92 (85%) Strand = Plus / Minus Query: 281 ctgcatcgtcacggcgaccaacgcatcccacgtccaggccgccgtcgtctgcggccgccg 340 ||||||||| ||||| || |||| |||||||||||||||||||| ||||||| ||| Sbjct: 74501 ctgcatcgtggcggcgtccgacgcgtcccacgtccaggccgccgtgcggtgcggccaccg 74442 Query: 341 gcacggcgtgcgcctccgcgtgcgcagcggcg 372 | |||||| |||||||||||||||||||||| Sbjct: 74441 gagcggcgtccgcctccgcgtgcgcagcggcg 74410
>emb|AJ862833.1| Triticum aestivum partial tria4 gene for pollen allergen Tri a 4, allele B Length = 1603 Score = 79.8 bits (40), Expect = 6e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 297 accaacgcatcccacgtccaggccgccgtcgtctgcggccgccggcacggcgtgcgcctc 356 |||||||| |||||| |||| |||| || || |||||||||||||||||||| |||||| Sbjct: 238 accaacgcctcccacatccaatccgcggtggtgtgcggccgccggcacggcgtccgcctc 297 Query: 357 cgcgtgcgcagcggcg 372 |||||||| ||||||| Sbjct: 298 cgcgtgcggagcggcg 313
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 79.8 bits (40), Expect = 6e-12 Identities = 79/92 (85%) Strand = Plus / Minus Query: 281 ctgcatcgtcacggcgaccaacgcatcccacgtccaggccgccgtcgtctgcggccgccg 340 ||||||||| ||||| || |||| |||||||||||||||||||| ||||||| ||| Sbjct: 17006894 ctgcatcgtggcggcgtccgacgcgtcccacgtccaggccgccgtgcggtgcggccaccg 17006835 Query: 341 gcacggcgtgcgcctccgcgtgcgcagcggcg 372 | |||||| |||||||||||||||||||||| Sbjct: 17006834 gagcggcgtccgcctccgcgtgcgcagcggcg 17006803
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 79.8 bits (40), Expect = 6e-12 Identities = 79/92 (85%) Strand = Plus / Minus Query: 281 ctgcatcgtcacggcgaccaacgcatcccacgtccaggccgccgtcgtctgcggccgccg 340 ||||||||| ||||| || |||| |||||||||||||||||||| ||||||| ||| Sbjct: 17101546 ctgcatcgtggcggcgtccgacgcgtcccacgtccaggccgccgtgcggtgcggccaccg 17101487 Query: 341 gcacggcgtgcgcctccgcgtgcgcagcggcg 372 | |||||| |||||||||||||||||||||| Sbjct: 17101486 gagcggcgtccgcctccgcgtgcgcagcggcg 17101455
>emb|AJ512488.2|PPR512488 Phleum pratense partial phlp4 gene for pollen allergen Phl p 4, allele B1 Length = 1580 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Plus Query: 275 gccgctctgcatcgtcacggcgaccaacgcatcccacgtccaggccgccgtcgtctgcgg 334 |||||||| |||| |||| | ||||||| |||||| ||||| ||||||| || ||||| Sbjct: 180 gccgctctacatcatcacccccaccaacgtctcccacatccagtccgccgtggtgtgcgg 239 Query: 335 ccgccggcacggcgtgcgcctccgcgtgcgcagcggcg 372 |||||| ||| |||| ||| |||||||||||||||||| Sbjct: 240 ccgccgccacagcgtccgcatccgcgtgcgcagcggcg 277
>emb|AJ862834.1| Hordeum vulgare partial horv4 gene for pollen allergen Hor v 4 Length = 1608 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Plus Query: 275 gccgctctgcatcgtcacggcgaccaacgcatcccacgtccaggccgccgtcgtctgcgg 334 |||||||| |||| |||| | |||||| | |||||| ||||| | || || || ||||| Sbjct: 219 gccgctctacatcatcacccccaccaacacctcccacatccagtctgctgtggtgtgcgg 278 Query: 335 ccgccggcacggcgtgcgcctccgcgtgcgcagcggcg 372 ||||||||||||||| |||||||||||||| ||||||| Sbjct: 279 ccgccggcacggcgtccgcctccgcgtgcggagcggcg 316
>gb|DQ251188.1| Phleum pratense major pollen allergen Phl p 4 precursor, mRNA, complete cds Length = 1741 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Plus Query: 275 gccgctctgcatcgtcacggcgaccaacgcatcccacgtccaggccgccgtcgtctgcgg 334 |||||||| |||| |||| | ||||||| |||||| ||||| ||||||| || ||||| Sbjct: 266 gccgctctacatcatcacccccaccaacgtctcccacatccagtccgccgtggtgtgcgg 325 Query: 335 ccgccggcacggcgtgcgcctccgcgtgcgcagcggcg 372 |||||| ||| |||| ||| |||||||||||||||||| Sbjct: 326 ccgccgccacagcgtccgcatccgcgtgcgcagcggcg 363
>emb|AJ862830.1| Secale cereale partial secc4 gene for pollen allergen Sec c 4, allele A Length = 1603 Score = 71.9 bits (36), Expect = 1e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 297 accaacgcatcccacgtccaggccgccgtcgtctgcggccgccggcacggcgtgcgcctc 356 |||||||| || ||| ||||| |||| || || |||||||||||||||||| | |||||| Sbjct: 241 accaacgcctcgcacatccagtccgcggtggtgtgcggccgccggcacggcatccgcctc 300 Query: 357 cgcgtgcgcagcggcg 372 |||||||| ||||||| Sbjct: 301 cgcgtgcggagcggcg 316
>gb|BT009387.1| Triticum aestivum clone wlm96.pk035.d7:fis, full insert mRNA sequence Length = 1805 Score = 71.9 bits (36), Expect = 1e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 289 tcacggcgaccaacgcatcccacgtccaggccgccgtcgtctgcggccgccggcacggcg 348 ||||| |||| ||||| |||||||| ||||||||||| | |||||||||||| ||| Sbjct: 269 tcacgccgacgaacgcctcccacgtgcaggccgccgtgctgtgcggccgccggagcgggc 328 Query: 349 tgcgcctccgcgtgcgcagcggcg 372 ||||| |||||||||||||||||| Sbjct: 329 tgcgcatccgcgtgcgcagcggcg 352
>emb|AJ862832.1| Triticum aestivum partial tria4 gene for pollen allergen Tri a 4, allele A Length = 1603 Score = 60.0 bits (30), Expect = 5e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 275 gccgctctgcatcgtcacggcgaccaacgcatcccacgtccaggccgccgtcgtctgcgg 334 |||||||| |||| |||| | |||||||| || ||| ||||| |||| || || ||||| Sbjct: 216 gccgctctacatcatcacccccaccaacgcctcgcacatccagtccgcggtggtgtgcgg 275 Query: 335 ccgccggcacggcgtgcgcctccgcgtgcgcagcggcg 372 ||||||||| |||| ||||||||||| || ||||||| Sbjct: 276 acgccggcacagcgtccgcctccgcgtccggagcggcg 313
>dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016D02 Length = 157822 Score = 48.1 bits (24), Expect = 0.020 Identities = 39/44 (88%) Strand = Plus / Minus Query: 329 ctgcggccgccggcacggcgtgcgcctccgcgtgcgcagcggcg 372 |||||||||||| ||| ||| ||| |||||||||||||||||| Sbjct: 144945 ctgcggccgccgccacaacgtccgcatccgcgtgcgcagcggcg 144902
>dbj|AK072611.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133A01, full insert sequence Length = 2030 Score = 48.1 bits (24), Expect = 0.020 Identities = 39/44 (88%) Strand = Plus / Plus Query: 329 ctgcggccgccggcacggcgtgcgcctccgcgtgcgcagcggcg 372 |||||||||||| ||| ||| ||| |||||||||||||||||| Sbjct: 316 ctgcggccgccgccacaacgtccgcatccgcgtgcgcagcggcg 359
>ref|XM_468176.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3248 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 137 tgccgccgacgacttcctccgg 158 |||||||||||||||||||||| Sbjct: 2883 tgccgccgacgacttcctccgg 2862
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 287 cgtcacggcgaccaacgcatcccacg 312 ||||| |||||||||||||||||||| Sbjct: 285909 cgtcagggcgaccaacgcatcccacg 285884
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 137 tgccgccgacgacttcctccgg 158 |||||||||||||||||||||| Sbjct: 33494122 tgccgccgacgacttcctccgg 33494101
>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0054K20 Length = 153584 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 137 tgccgccgacgacttcctccgg 158 |||||||||||||||||||||| Sbjct: 68997 tgccgccgacgacttcctccgg 68976
>dbj|AK072337.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043H01, full insert sequence Length = 3406 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 137 tgccgccgacgacttcctccgg 158 |||||||||||||||||||||| Sbjct: 3041 tgccgccgacgacttcctccgg 3020
>dbj|AK071978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088I16, full insert sequence Length = 3248 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 137 tgccgccgacgacttcctccgg 158 |||||||||||||||||||||| Sbjct: 2882 tgccgccgacgacttcctccgg 2861
>ref|XM_481787.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1650 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 349 tgcgcctccgcgtgcgcagcggcg 372 ||||| |||||||||||||||||| Sbjct: 296 tgcgcatccgcgtgcgcagcggcg 319
>emb|AJ862835.1| Lolium perenne partial lolp4 gene for pollen allergen Lol p 4 Length = 1272 Score = 40.1 bits (20), Expect = 5.0 Identities = 44/52 (84%) Strand = Plus / Plus Query: 321 gccgtcgtctgcggccgccggcacggcgtgcgcctccgcgtgcgcagcggcg 372 ||||| || ||||||||||| ||| ||| ||| ||||||| |||||||||| Sbjct: 2 gccgtggtgtgcggccgccgttacgacgtccgcatccgcgtacgcagcggcg 53
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 cacggcgaccaacgcatcccacgt 313 ||||| |||||||||||||||||| Sbjct: 1198584 cacggtgaccaacgcatcccacgt 1198607
>gb|AF363310.1| Polycope sp. OC-2001 18S ribosomal RNA gene, partial sequence Length = 1818 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 ggagctcgccgtcgttcgcg 218 |||||||||||||||||||| Sbjct: 1352 ggagctcgccgtcgttcgcg 1371
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 gccgtcgtctgcggccgccg 340 |||||||||||||||||||| Sbjct: 3115361 gccgtcgtctgcggccgccg 3115342
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 349 tgcgcctccgcgtgcgcagcggcg 372 ||||| |||||||||||||||||| Sbjct: 15504538 tgcgcatccgcgtgcgcagcggcg 15504515
>dbj|AP004645.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_B10 Length = 148508 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 349 tgcgcctccgcgtgcgcagcggcg 372 ||||| |||||||||||||||||| Sbjct: 52296 tgcgcatccgcgtgcgcagcggcg 52273
>gb|DQ231522.1| Zea mays molybdenum cofactor biosynthesis protein (Vp10) gene, complete cds Length = 10034 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 339 cggcacggcgtgcgcctccgcgtg 362 |||||||||||||| ||||||||| Sbjct: 4340 cggcacggcgtgcggctccgcgtg 4317
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 gccgtcgtctgcggccgccg 340 |||||||||||||||||||| Sbjct: 3115306 gccgtcgtctgcggccgccg 3115287
>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159711 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 gccgtcgtctgcggccgccg 340 |||||||||||||||||||| Sbjct: 39482 gccgtcgtctgcggccgccg 39501 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,923,478 Number of Sequences: 3902068 Number of extensions: 1923478 Number of successful extensions: 38010 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 35 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 37624 Number of HSP's gapped (non-prelim): 378 length of query: 372 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 350 effective length of database: 17,147,199,772 effective search space: 6001519920200 effective search space used: 6001519920200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)