ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast46g06 |
|---|---|
| Clone Library Name | barley_pub |
>ALDH2_BACSU (P39616) Probable aldehyde dehydrogenase ywdH (EC 1.2.1.3)| Length = 457 Score = 52.8 bits (125), Expect = 3e-07 Identities = 25/92 (27%), Positives = 43/92 (46%) Frame = +1 Query: 151 RATFEGGRTRPXXXXXXXXXXXXXXXXDKEEEAFRALHADLGKHRAEAYRDEVGVLTKSA 330 +A F G TRP E + AL+ DL K EAY E+G++ + Sbjct: 13 KAYFAAGHTRPLESRLNILRKLKQAVRTHEADLIAALYQDLHKSEQEAYSTEIGIVLEEI 72 Query: 331 NAALREMGKWAAPEKVWAPLAAFPASAHVVPE 426 + ++ + KW+ P++V PL + + ++PE Sbjct: 73 SFVMKRLRKWSKPKRVKTPLTHLGSKSIIIPE 104
>AL3A1_HUMAN (P30838) Aldehyde dehydrogenase, dimeric NADP-preferring (EC| 1.2.1.5) (ALDH class 3) (ALDHIII) Length = 453 Score = 44.7 bits (104), Expect = 9e-05 Identities = 25/76 (32%), Positives = 37/76 (48%) Frame = +1 Query: 151 RATFEGGRTRPXXXXXXXXXXXXXXXXDKEEEAFRALHADLGKHRAEAYRDEVGVLTKSA 330 RA F GRTRP ++E+E AL ADL K+ AY +EV + + Sbjct: 12 RAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEI 71 Query: 331 NAALREMGKWAAPEKV 378 ++++ +WAA E V Sbjct: 72 EYMIQKLPEWAADEPV 87
>AL3B1_MOUSE (Q80VQ0) Aldehyde dehydrogenase 3B1 (EC 1.2.1.5) (Aldehyde| dehydrogenase 7) Length = 468 Score = 43.5 bits (101), Expect = 2e-04 Identities = 29/103 (28%), Positives = 43/103 (41%) Frame = +1 Query: 118 LPALQRRLGELRATFEGGRTRPXXXXXXXXXXXXXXXXDKEEEAFRALHADLGKHRAEAY 297 + + + +L +LR F+ GRTR D +++ AL DL K EA Sbjct: 1 MDSFEDKLQQLREAFKEGRTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFEAE 60 Query: 298 RDEVGVLTKSANAALREMGKWAAPEKVWAPLAAFPASAHVVPE 426 E+ + + ALR + W EKV LA SA + E Sbjct: 61 VSEIAISQAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKE 103
>AL3B1_RAT (Q5XI42) Aldehyde dehydrogenase 3B1 (EC 1.2.1.5)| Length = 468 Score = 42.7 bits (99), Expect = 4e-04 Identities = 28/103 (27%), Positives = 42/103 (40%) Frame = +1 Query: 118 LPALQRRLGELRATFEGGRTRPXXXXXXXXXXXXXXXXDKEEEAFRALHADLGKHRAEAY 297 + + + +L +LR F GRTR D +++ AL DL K E+ Sbjct: 1 MDSFEDKLQQLREAFNAGRTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFESE 60 Query: 298 RDEVGVLTKSANAALREMGKWAAPEKVWAPLAAFPASAHVVPE 426 E+ + + ALR + W EKV LA SA + E Sbjct: 61 VSEIAISQAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKE 103
>AL3A2_RAT (P30839) Fatty aldehyde dehydrogenase (EC 1.2.1.3) (Aldehyde| dehydrogenase, microsomal) (Aldehyde dehydrogenase family 3 member A2) (Aldehyde dehydrogenase 10) Length = 484 Score = 41.2 bits (95), Expect = 0.001 Identities = 26/100 (26%), Positives = 42/100 (42%) Frame = +1 Query: 127 LQRRLGELRATFEGGRTRPXXXXXXXXXXXXXXXXDKEEEAFRALHADLGKHRAEAYRDE 306 ++R++ LR TF GR+RP ++E++ A+ ADL K AY E Sbjct: 1 MERQVQRLRQTFRSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLSKSELNAYSHE 60 Query: 307 VGVLTKSANAALREMGKWAAPEKVWAPLAAFPASAHVVPE 426 V + + L + + A+ L A+V PE Sbjct: 61 VITILGEIDFMLGNLPELASARPAKKNLLTMMDEAYVQPE 100
>AL3A2_MACFA (Q60HH8) Fatty aldehyde dehydrogenase (EC 1.2.1.3) (Aldehyde| dehydrogenase, microsomal) (Aldehyde dehydrogenase family 3 member A2) (Aldehyde dehydrogenase 10) Length = 485 Score = 39.7 bits (91), Expect = 0.003 Identities = 23/100 (23%), Positives = 41/100 (41%) Frame = +1 Query: 127 LQRRLGELRATFEGGRTRPXXXXXXXXXXXXXXXXDKEEEAFRALHADLGKHRAEAYRDE 306 ++R + +R F GR+RP ++E++ A+ ADL K AY E Sbjct: 1 MEREVQRVRQAFLSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLCKSELNAYSQE 60 Query: 307 VGVLTKSANAALREMGKWAAPEKVWAPLAAFPASAHVVPE 426 V + + L + +W + V L A++ P+ Sbjct: 61 VITVLGEIDFMLENLPEWVTAKPVKKNLLTMMDEAYIQPQ 100
>AL3B1_HUMAN (P43353) Aldehyde dehydrogenase 3B1 (EC 1.2.1.5) (Aldehyde| dehydrogenase 7) Length = 468 Score = 37.4 bits (85), Expect = 0.015 Identities = 28/96 (29%), Positives = 36/96 (37%) Frame = +1 Query: 139 LGELRATFEGGRTRPXXXXXXXXXXXXXXXXDKEEEAFRALHADLGKHRAEAYRDEVGVL 318 L LR F GRTRP + ++ AL DL K E+ EV + Sbjct: 8 LRRLREAFHAGRTRPAEFRAAQLQGLGRFLQENKQLLHDALAQDLHKSAFESEVSEVAIS 67 Query: 319 TKSANAALREMGKWAAPEKVWAPLAAFPASAHVVPE 426 ALR + W E+V LA SA + E Sbjct: 68 QGEVTLALRNLRAWMKDERVPKNLATQLDSAFIRKE 103
>AL3A1_RAT (P11883) Aldehyde dehydrogenase, dimeric NADP-preferring (EC| 1.2.1.5) (ALDH class 3) (Tumor-associated aldehyde dehydrogenase) (HTC-ALDH) Length = 452 Score = 33.9 bits (76), Expect = 0.16 Identities = 19/76 (25%), Positives = 32/76 (42%) Frame = +1 Query: 151 RATFEGGRTRPXXXXXXXXXXXXXXXXDKEEEAFRALHADLGKHRAEAYRDEVGVLTKSA 330 R F G+TR + + AL +DLGK+ +Y +EV + + Sbjct: 11 REAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEEL 70 Query: 331 NAALREMGKWAAPEKV 378 + ++E+ WA E V Sbjct: 71 DTTIKELPDWAEDEPV 86
>AL3A2_HUMAN (P51648) Fatty aldehyde dehydrogenase (EC 1.2.1.3) (Aldehyde| dehydrogenase, microsomal) (Aldehyde dehydrogenase family 3 member A2) (Aldehyde dehydrogenase 10) Length = 485 Score = 33.5 bits (75), Expect = 0.21 Identities = 20/100 (20%), Positives = 39/100 (39%) Frame = +1 Query: 127 LQRRLGELRATFEGGRTRPXXXXXXXXXXXXXXXXDKEEEAFRALHADLGKHRAEAYRDE 306 ++ + +R F GR+RP ++E++ A+ ADL K Y E Sbjct: 1 MELEVRRVRQAFLSGRSRPLRFRLQQLEALRRMVQEREKDILTAIAADLCKSEFNVYSQE 60 Query: 307 VGVLTKSANAALREMGKWAAPEKVWAPLAAFPASAHVVPE 426 V + + L + +W + V + A++ P+ Sbjct: 61 VITVLGEIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQ 100
>RS13_XANOR (Q5GWV6) 30S ribosomal protein S13| Length = 118 Score = 29.6 bits (65), Expect = 3.1 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 1/74 (1%) Frame = +1 Query: 106 AAVELPALQRRLGELRATFEGGRTRPXXXXXXXXXXXXXXXXDKEEEAFRALHADLGKHR 285 A V LPA + L++ + GRTR D E L A++GK+ Sbjct: 5 AGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEVGKYV 64 Query: 286 AEA-YRDEVGVLTK 324 E R E+G+ K Sbjct: 65 VEGDLRREIGIAIK 78
>RS13_XANCP (Q9Z3F0) 30S ribosomal protein S13| Length = 118 Score = 29.6 bits (65), Expect = 3.1 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 1/74 (1%) Frame = +1 Query: 106 AAVELPALQRRLGELRATFEGGRTRPXXXXXXXXXXXXXXXXDKEEEAFRALHADLGKHR 285 A V LPA + L++ + GRTR D E L A++GK+ Sbjct: 5 AGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEVGKYV 64 Query: 286 AEA-YRDEVGVLTK 324 E R E+G+ K Sbjct: 65 VEGDLRREIGIAIK 78
>RS13_XANC8 (Q4URG0) 30S ribosomal protein S13| Length = 118 Score = 29.6 bits (65), Expect = 3.1 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 1/74 (1%) Frame = +1 Query: 106 AAVELPALQRRLGELRATFEGGRTRPXXXXXXXXXXXXXXXXDKEEEAFRALHADLGKHR 285 A V LPA + L++ + GRTR D E L A++GK+ Sbjct: 5 AGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEVGKYV 64 Query: 286 AEA-YRDEVGVLTK 324 E R E+G+ K Sbjct: 65 VEGDLRREIGIAIK 78
>RS13_XANC5 (Q3BWW2) 30S ribosomal protein S13| Length = 118 Score = 29.6 bits (65), Expect = 3.1 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 1/74 (1%) Frame = +1 Query: 106 AAVELPALQRRLGELRATFEGGRTRPXXXXXXXXXXXXXXXXDKEEEAFRALHADLGKHR 285 A V LPA + L++ + GRTR D E L A++GK+ Sbjct: 5 AGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEVGKYV 64 Query: 286 AEA-YRDEVGVLTK 324 E R E+G+ K Sbjct: 65 VEGDLRREIGIAIK 78
>RS13_XANAC (Q8NKX3) 30S ribosomal protein S13| Length = 118 Score = 29.6 bits (65), Expect = 3.1 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 1/74 (1%) Frame = +1 Query: 106 AAVELPALQRRLGELRATFEGGRTRPXXXXXXXXXXXXXXXXDKEEEAFRALHADLGKHR 285 A V LPA + L++ + GRTR D E L A++GK+ Sbjct: 5 AGVNLPAQKHVWVGLQSIYGIGRTRSKKLCESAGVTSTTKIRDLSEPEIERLRAEVGKYV 64 Query: 286 AEA-YRDEVGVLTK 324 E R E+G+ K Sbjct: 65 VEGDLRREIGIAIK 78
>KIFC2_HUMAN (Q96AC6) Kinesin-like protein KIFC2| Length = 838 Score = 28.9 bits (63), Expect = 5.3 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = -3 Query: 197 CRHDRGRVLPPSKVARSSPRRRCSAGSSTAAPISST 90 CR R PP+ +AR SPR R +G +A S T Sbjct: 717 CRSPPTRARPPAPLARRSPRGRRISGRQSAPSSSPT 752 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.131 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,387,729 Number of Sequences: 219361 Number of extensions: 315468 Number of successful extensions: 1682 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1671 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1682 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
