>ERF1_LYCES (Q84XB3) Ethylene-responsive transcription factor 1|
           (Ethylene-responsive element-binding factor 1) (EREBP-1)
           (ERF1-like protein) (LeERF1)
          Length = 244

 Score = 58.2 bits (139), Expect = 8e-09
 Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 4/60 (6%)
 Frame = +1

Query: 214 YCRSASFGSLV---ADQWSESLPFRADDSDDMVVYGALRDAFSCGWLPDG-SFAAVKPEP 381
           YCRS+SF SL+    + W + LP + +DS+DMV+YG L+DAFS GW P   +   VK EP
Sbjct: 20  YCRSSSFSSLMPCLTESWGD-LPLKVNDSEDMVIYGFLQDAFSIGWTPSNLTSEEVKLEP 78

>ERF2_NICSY (Q9LW50) Ethylene-responsive transcription factor 2|
           (Ethylene-responsive element-binding factor 2) (EREBP-2)
           (NsERF2)
          Length = 237

 Score = 51.2 bits (121), Expect = 9e-07
 Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
 Frame = +1

Query: 214 YCRSASFGSLV---ADQWSESLPFRADDSDDMVVYGALRDAFSCGWLP-DGSFAAVKPEP 381
           Y R++SF SL+    D W + LP + DDS+DMV+YG L DA + GW P + +   +K EP
Sbjct: 12  YHRTSSFSSLMPCLTDTWGD-LPLKVDDSEDMVIYGLLSDALTTGWTPFNLTSTEIKAEP 70

>ERF1A_ARATH (O80337) Ethylene-responsive transcription factor 1A|
           (Ethylene-responsive element-binding factor 1A)
           (EREBP-1A) (AtERF1)
          Length = 268

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 12/110 (10%)
 Frame = +1

Query: 97  MLLNPASEALVLDSIRQHLMEDTXXXXXXXXXXXXXXX---------XYCRSASFGSLV- 246
           M  +  S+   L+SIR+HL+ ++                         Y R+ SF  L  
Sbjct: 3   MTADSQSDYAFLESIRRHLLGESEPILSESTASSVTQSCVTGQSIKPVYGRNPSFSKLYP 62

Query: 247 --ADQWSESLPFRADDSDDMVVYGALRDAFSCGWLPDGSFAAVKPEPLPS 390
              + W + LP + +DS+DM+VYG L DAF  GW P  S +       PS
Sbjct: 63  CFTESWGD-LPLKENDSEDMLVYGILNDAFHGGWEPSSSSSDEDRSSFPS 111

>ERF13_ARATH (Q8L9K1) Ethylene-responsive transcription factor 13|
           (Ethylene-responsive element-binding factor 13)
           (EREBP-13) (AtERF13)
          Length = 226

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
 Frame = +1

Query: 214 YCRSASFGSLVA-DQWSESLPFRADDSDDMVVYGALRDAFSCGWLPDGSFAAVKPEPLPS 390
           Y R+ SF +++  D WS+ LP   DDS DM +Y  LRDA S GW P     +V P   P+
Sbjct: 16  YFRNPSFSNVILNDNWSD-LPLSVDDSQDMAIYNTLRDAVSSGWTP-----SVPPVTSPA 69

Query: 391 PES 399
            E+
Sbjct: 70  EEN 72

>ERF2_TOBAC (Q40479) Ethylene-responsive transcription factor 2|
           (Ethylene-responsive element-binding factor 2) (EREBP-2)
           (NtERF2)
          Length = 233

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
 Frame = +1

Query: 229 SFGSLV---ADQWSESLPFRADDSDDMVVYGALRDAFSCGWLP-DGSFAAVKPEP 381
           SF SL+    D W + LP + DDS+DMV+YG L DA + GW P + +   +K EP
Sbjct: 13  SFSSLMPCLTDTWGD-LPLKVDDSEDMVIYGLLSDALTAGWTPFNLTSTEIKAEP 66

>ERF1_TOBAC (Q40476) Ethylene-responsive transcription factor 1|
           (Ethylene-responsive element-binding factor 1) (EREBP-1)
           (NtERF1)
          Length = 236

 Score = 45.4 bits (106), Expect = 5e-05
 Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
 Frame = +1

Query: 214 YCRSASFGSLV---ADQWSESLPFRADDSDDMVVYGALRDAFSCGWLP 348
           Y R++SF  L+    + W + LP + DDS+DMV+Y  L+DA + GW P
Sbjct: 21  YRRNSSFSRLIPCLTETWGD-LPLKVDDSEDMVIYTLLKDALNVGWSP 67

>ERF2_ARATH (O80338) Ethylene-responsive transcription factor 2|
           (Ethylene-responsive element-binding factor 2) (EREBP-2)
           (AtERF2)
          Length = 243

 Score = 35.8 bits (81), Expect = 0.041
 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 9/57 (15%)
 Frame = +1

Query: 238 SLVADQWSESLPFRADDSDDMVVYGALRDAF---------SCGWLPDGSFAAVKPEP 381
           S   + W   LP + +DS+DM+VYG L+DAF         SC +     F AVK EP
Sbjct: 39  SCFTESWG-GLPLKENDSEDMLVYGLLKDAFHFDTSSSDLSCLF----DFPAVKVEP 90

>BCL3_MOUSE (Q9Z2F6) B-cell lymphoma 3-encoded protein homolog (Protein Bcl-3)|
          Length = 440

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = -3

Query: 365 AAKEPSGSQPQEKASRRAP*TTMSSESSARNGSDSLHWSATRLPKLA 225
           A++  SGSQP+    + A   T S ESS+R  S+ L  S +  P L+
Sbjct: 349 ASRAASGSQPEPSPDQSA---TNSPESSSRLSSNGLQSSPSSSPSLS 392

>YDIF_BACSU (O05519) Hypothetical ABC transporter ATP-binding protein ydiF|
          Length = 642

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 19/53 (35%), Positives = 25/53 (47%)
 Frame = +1

Query: 7   LHAIASFTHSDQLTHRPDHPGTQQSRGAARMLLNPASEALVLDSIRQHLMEDT 165
           LH +  F+H D  T      G Q++R A   LL    + L+LD    HL  DT
Sbjct: 146 LHGLG-FSHFDDSTQVQSLSGGQKTRLALGKLLLTQPDLLILDEPTNHLDIDT 197


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,107,278
Number of Sequences: 219361
Number of extensions: 593492
Number of successful extensions: 2564
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2562
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)