ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast46e11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001031101.1| Gallus gallus myotubularin related protein 9 (MTMR9), mRNA Length = 4819 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 aaacaaaacaaaactctctcc 44 ||||||||||||||||||||| Sbjct: 1967 aaacaaaacaaaactctctcc 1947
>gb|AC158990.2| Mus musculus BAC clone RP23-416E18 from chromosome 13, complete sequence Length = 191036 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 aaacaaaacaaaactctctcc 44 ||||||||||||||||||||| Sbjct: 6059 aaacaaaacaaaactctctcc 6039
>gb|AC132852.12| Mus musculus chromosome 9, clone RP24-298N7, complete sequence Length = 183786 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 aaaacggaaacaaaacaaaac 37 ||||||||||||||||||||| Sbjct: 18387 aaaacggaaacaaaacaaaac 18367
>gb|AC135809.4| Mus musculus BAC clone RP23-353F16 from chromosome 7, complete sequence Length = 195041 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 aaacaaaacaaaactctctcc 44 ||||||||||||||||||||| Sbjct: 170956 aaacaaaacaaaactctctcc 170936
>gb|AC165425.2| Mus musculus BAC clone RP23-252G18 from chromosome 9, complete sequence Length = 217329 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 aaaacggaaacaaaacaaaac 37 ||||||||||||||||||||| Sbjct: 160929 aaaacggaaacaaaacaaaac 160909
>gb|U49116.1|IAU49116 Influenza A virus (A/swine/Hong Kong/168/1993(H1N1)) matrix protein M2 (M) gene, partial cds; and matrix protein M1 (M) gene, complete cds Length = 976 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 ccatggcctccgctgcttgct 179 ||||||||||||||||||||| Sbjct: 610 ccatggcctccgctgcttgct 590
>gb|U49117.1|IAU49117 Influenza A virus (A/duck/Nanchang/1749/1992(H11N2)) matrix protein M2 (M) and matrix protein M1 (M) genes, complete cds Length = 1010 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 ccatggcctccgctgcttgct 179 ||||||||||||||||||||| Sbjct: 623 ccatggcctccgctgcttgct 603
>gb|CY010701.1| Influenza A virus (A/New York/625/1996(H3N2)) segment 7, complete sequence Length = 988 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 ccatggcctccgctgcttgct 179 ||||||||||||||||||||| Sbjct: 623 ccatggcctccgctgcttgct 603
>gb|AC158365.2| Mus musculus BAC clone RP23-182N12 from chromosome 12, complete sequence Length = 220129 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 aaaacggaaacaaaacaaaac 37 ||||||||||||||||||||| Sbjct: 134113 aaaacggaaacaaaacaaaac 134133
>emb|AL132953.2|ATF18N11 Arabidopsis thaliana DNA chromosome 3, BAC clone F18N11 Length = 91274 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 aaaacggaaacaaaacaaaac 37 ||||||||||||||||||||| Sbjct: 46911 aaaacggaaacaaaacaaaac 46931
>emb|AJ851634.1| Gallus gallus mRNA for hypothetical protein, clone 14c5 Length = 4819 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 aaacaaaacaaaactctctcc 44 ||||||||||||||||||||| Sbjct: 1967 aaacaaaacaaaactctctcc 1947
>emb|AJ458296.1|INA458296 Influenza A virus (A/Israel/6/2002(H1N2)) partial M1 gene for matrix protein 1 and partial M2 gene for matrix protein 2, genomic RNA Length = 749 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 ccatggcctccgctgcttgct 179 ||||||||||||||||||||| Sbjct: 487 ccatggcctccgctgcttgct 467
>emb|AJ427302.1|INA427302 Influenza A virus (A/curlew sandpiper/Hong Kong/208/89(H10N5)) M1 gene for matrix protein 1, genomic RNA Length = 982 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 ccatggcctccgctgcttgct 179 ||||||||||||||||||||| Sbjct: 610 ccatggcctccgctgcttgct 590
>gb|CY003753.2| Influenza A virus (A/Nanchang/0074/94(H3N2)) segment 7, complete sequence Length = 989 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 ccatggcctccgctgcttgct 179 ||||||||||||||||||||| Sbjct: 623 ccatggcctccgctgcttgct 603
>gb|CY009013.1| Influenza A virus (A/Nanchang/12/93(H3N2)) segment 7, complete sequence Length = 995 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 ccatggcctccgctgcttgct 179 ||||||||||||||||||||| Sbjct: 623 ccatggcctccgctgcttgct 603
>gb|CY006332.2| Influenza A virus (A/Nanchang/A2/94(H3N2)) segment 7, complete sequence Length = 988 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 ccatggcctccgctgcttgct 179 ||||||||||||||||||||| Sbjct: 623 ccatggcctccgctgcttgct 603
>gb|CY005494.1| Influenza A virus (A/duck/Nanchang/1904/1992(H7N1)) segment 7, complete sequence Length = 1027 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 ccatggcctccgctgcttgct 179 ||||||||||||||||||||| Sbjct: 635 ccatggcctccgctgcttgct 615
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 108 gaataaagcagaggaggggagagag 132 ||||||||||||||||||| ||||| Sbjct: 1882510 gaataaagcagaggaggggggagag 1882486
>gb|AC020754.4|AC020754 Homo sapiens chromosome 3 clone RP11-37I4 map 3p, complete sequence Length = 161612 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 caaaacggaaacaaaacaaaa 36 ||||||||||||||||||||| Sbjct: 79807 caaaacggaaacaaaacaaaa 79827
>gb|AC018821.4|AC018821 Homo sapiens chromosome 3 clone RP11-294H24 map 3p, complete sequence Length = 153879 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 caaaacggaaacaaaacaaaa 36 ||||||||||||||||||||| Sbjct: 147781 caaaacggaaacaaaacaaaa 147801
>gb|CY008253.1| Influenza A virus (A/Canterbury/312/2004(H3N2)) segment 7, complete sequence Length = 988 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 ccatggcctccgctgcttgct 179 ||||||||||||||||||||| Sbjct: 623 ccatggcctccgctgcttgct 603
>gb|CY005531.1| Influenza A virus (A/duck/Nanchang/1749/1992(H11N2)) segment 7, complete sequence Length = 1027 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 ccatggcctccgctgcttgct 179 ||||||||||||||||||||| Sbjct: 635 ccatggcctccgctgcttgct 615
>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0081C13 Length = 144624 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 108 gaataaagcagaggaggggagagag 132 ||||||||||||||||||| ||||| Sbjct: 22071 gaataaagcagaggaggggggagag 22047
>dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585B01 Length = 133231 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 108 gaataaagcagaggaggggagagag 132 ||||||||||||||||||| ||||| Sbjct: 119154 gaataaagcagaggaggggggagag 119130
>gb|AC153642.7| Mus musculus 6 BAC RP23-334E23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 227781 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ccaaaacggaaacaaaacaaa 35 ||||||||||||||||||||| Sbjct: 96687 ccaaaacggaaacaaaacaaa 96707
>gb|CY007836.1| Influenza A virus (A/Nanchang/A1/94(H3N2)) segment 7, complete sequence Length = 975 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 ccatggcctccgctgcttgct 179 ||||||||||||||||||||| Sbjct: 610 ccatggcctccgctgcttgct 590
>gb|AC090955.3| Homo sapiens chromosome 3 clone RP11-622A14 map 3p, complete sequence Length = 209168 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 caaaacggaaacaaaacaaaa 36 ||||||||||||||||||||| Sbjct: 16141 caaaacggaaacaaaacaaaa 16161
>emb|AL136338.4|CNS01DW5 Human chromosome 14 DNA sequence BAC C-2022M23 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 143177 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 aaacaaaacaaaactctctcc 44 ||||||||||||||||||||| Sbjct: 95704 aaacaaaacaaaactctctcc 95724
>emb|AL606918.9| Mouse DNA sequence from clone RP23-327O13 on chromosome 4, complete sequence Length = 192787 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 aaacggaaacaaaacaaaact 38 ||||||||||||||||||||| Sbjct: 120205 aaacggaaacaaaacaaaact 120185
>gb|CY006348.1| Influenza A virus (A/Nanchang/58/93(H3N2)) segment 7, complete sequence Length = 997 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 ccatggcctccgctgcttgct 179 ||||||||||||||||||||| Sbjct: 623 ccatggcctccgctgcttgct 603
>gb|CY006340.1| Influenza A virus (A/Nanchang/0058/94(H3N2)) segment 7, complete sequence Length = 998 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 ccatggcctccgctgcttgct 179 ||||||||||||||||||||| Sbjct: 623 ccatggcctccgctgcttgct 603
>gb|AC021999.5| Homo sapiens chromosome 3 clone RP11-129J10 map 3p, complete sequence Length = 153152 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 caaaacggaaacaaaacaaaa 36 ||||||||||||||||||||| Sbjct: 71335 caaaacggaaacaaaacaaaa 71355
>gb|AC124664.14| Mus musculus chromosome 1, clone RP23-103B18, complete sequence Length = 220456 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 15 ccaaaacggaaacaaaacaaaactctct 42 ||||||| ||||||||||||||| |||| Sbjct: 133927 ccaaaacagaaacaaaacaaaaccctct 133954
>gb|AC101933.8| Mus musculus chromosome 7, clone RP24-70M5, complete sequence Length = 205123 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 caaaacaaaactctctcctc 46 |||||||||||||||||||| Sbjct: 3107 caaaacaaaactctctcctc 3088
>gb|AC154431.2| Mus musculus BAC clone RP23-174B22 from chromosome 13, complete sequence Length = 195030 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 tccaaaacggaaacaaaacaaaac 37 |||||||| ||||||||||||||| Sbjct: 101513 tccaaaacagaaacaaaacaaaac 101536
>gb|AC127254.3| Mus musculus BAC clone RP24-290D19 from chromosome 9, complete sequence Length = 187995 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aaacaaaacaaaactctctc 43 |||||||||||||||||||| Sbjct: 4149 aaacaaaacaaaactctctc 4168
>gb|AC125464.4| Mus musculus BAC clone RP23-113C9 from 14, complete sequence Length = 203804 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aaacaaaacaaaactctctc 43 |||||||||||||||||||| Sbjct: 33736 aaacaaaacaaaactctctc 33717
>gb|AC122320.4| Mus musculus BAC clone RP23-315F17 from 14, complete sequence Length = 197655 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aaacaaaacaaaactctctc 43 |||||||||||||||||||| Sbjct: 29364 aaacaaaacaaaactctctc 29383
>emb|AL513343.22| Human DNA sequence from clone RP11-90O23 on chromosome 1 Contains the 5' end of the ATP2B4 gene for ATPase Ca++ transporting plasma membrane 4 and a TGF beta-inducible nuclear protein 1 (TINP1) pseudogene, complete sequence Length = 147676 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 cgcggcctctgcgacccagccccg 248 ||||||||||||||||| |||||| Sbjct: 84363 cgcggcctctgcgaccccgccccg 84386
>emb|AL355345.13| Human DNA sequence from clone RP1-70P1 on chromosome 6 Contains part of the gene for a novel protein (contains KIAA1880 and FLJ32945), complete sequence Length = 54829 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 17 aaaacggaaacaaaacaaaactct 40 ||||| |||||||||||||||||| Sbjct: 39294 aaaacagaaacaaaacaaaactct 39271
>emb|CR925797.8| Zebrafish DNA sequence from clone CH211-194I8 in linkage group 13, complete sequence Length = 65727 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ccaaaacggaaacaaaacaa 34 |||||||||||||||||||| Sbjct: 9037 ccaaaacggaaacaaaacaa 9056
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 caagagcgccatggcctccg 170 |||||||||||||||||||| Sbjct: 169321 caagagcgccatggcctccg 169340
>gb|DP000062.1| Sus scrofa target 117 genomic scaffold Length = 605739 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aaacaaaacaaaactctctc 43 |||||||||||||||||||| Sbjct: 557723 aaacaaaacaaaactctctc 557742
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 ccggccccggcgtccggctc 352 |||||||||||||||||||| Sbjct: 799432 ccggccccggcgtccggctc 799413
>gb|AC010441.6| Homo sapiens chromosome 5 clone CTD-2228J3, complete sequence Length = 157076 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aaacaaaacaaaactctctc 43 |||||||||||||||||||| Sbjct: 83830 aaacaaaacaaaactctctc 83849
>gb|AC008643.6| Homo sapiens chromosome 5 clone CTB-180E20, complete sequence Length = 103788 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aaacaaaacaaaactctctc 43 |||||||||||||||||||| Sbjct: 11321 aaacaaaacaaaactctctc 11340
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 tcagtcgtctcatgctccgg 281 |||||||||||||||||||| Sbjct: 3476806 tcagtcgtctcatgctccgg 3476787
>gb|AC119271.11| Mus musculus chromosome 7, clone RP24-373F15, complete sequence Length = 178814 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 caaaacaaaactctctcctc 46 |||||||||||||||||||| Sbjct: 4549 caaaacaaaactctctcctc 4568
>gb|AC138136.2| Homo sapiens chromosome 8, clone RP11-158D1, complete sequence Length = 82309 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aaacaaaacaaaactctctc 43 |||||||||||||||||||| Sbjct: 55447 aaacaaaacaaaactctctc 55466
>gb|AC090453.4| Homo sapiens chromosome 8, clone RP11-380B11, complete sequence Length = 166452 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aaacaaaacaaaactctctc 43 |||||||||||||||||||| Sbjct: 140136 aaacaaaacaaaactctctc 140117
>dbj|AK102618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099G21, full insert sequence Length = 1998 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 agcagaggaggggagagaga 133 |||||||||||||||||||| Sbjct: 9 agcagaggaggggagagaga 28
>gb|AC005003.2|AC005003 Homo sapiens PAC clone RP3-400N23 from 22q11.2-q22, complete sequence Length = 65750 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aaacaaaacaaaactctctc 43 |||||||||||||||||||| Sbjct: 5279 aaacaaaacaaaactctctc 5260
>emb|AL049829.4|CNS0000B Human chromosome 14 DNA sequence BAC R-124D2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 196292 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aaacaaaacaaaactctctc 43 |||||||||||||||||||| Sbjct: 44046 aaacaaaacaaaactctctc 44065
>dbj|AP006307.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-673J3, complete sequence Length = 143669 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aaacaaaacaaaactctctc 43 |||||||||||||||||||| Sbjct: 90659 aaacaaaacaaaactctctc 90678
>gb|AC157945.2| Mus musculus BAC clone RP23-289C11 from chromosome 9, complete sequence Length = 216396 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 aaacaaaacaaaactctctc 43 |||||||||||||||||||| Sbjct: 116204 aaacaaaacaaaactctctc 116223
>emb|AL683818.12| Mouse DNA sequence from clone RP23-229B23 on chromosome 4, complete sequence Length = 210718 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 aaacggaaacaaaacaaaac 37 |||||||||||||||||||| Sbjct: 24163 aaacggaaacaaaacaaaac 24182
>emb|AL626774.23| Mouse DNA sequence from clone RP23-198O15 on chromosome 4, complete sequence Length = 181545 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aaacaaaacaaaactctctc 43 |||||||||||||||||||| Sbjct: 24635 aaacaaaacaaaactctctc 24616
>emb|AL161871.6|CNS01RHN Human chromosome 14 DNA sequence BAC R-66E7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 148068 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 ctgcttgctagccagctagctacc 194 |||||||||||| ||||||||||| Sbjct: 46885 ctgcttgctagctagctagctacc 46862
>emb|AL928741.2| Mouse DNA sequence from clone RP23-264P3 on chromosome 2, complete sequence Length = 185830 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 ccaaaacggaaacaaaacaaaact 38 |||||| ||||||||||||||||| Sbjct: 159640 ccaaaagggaaacaaaacaaaact 159617
>dbj|AB037997.1| Danio rerio hagoromo gene, exons 1 to 6, partial cds Length = 52301 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccaaaacggaaacaaaacaa 34 |||||||||||||||||||| Sbjct: 33680 ccaaaacggaaacaaaacaa 33661
>dbj|AP000074.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region, section 10/19, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 aaacaaaacaaaactctctc 43 |||||||||||||||||||| Sbjct: 61559 aaacaaaacaaaactctctc 61540 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,281,640 Number of Sequences: 3902068 Number of extensions: 3281640 Number of successful extensions: 423150 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 422572 Number of HSP's gapped (non-prelim): 578 length of query: 379 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 357 effective length of database: 17,147,199,772 effective search space: 6121550318604 effective search space used: 6121550318604 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
