| Clone Name | bast46e10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_469768.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1724 Score = 93.7 bits (47), Expect = 4e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 252 ggcggcggtggtggcagcgctggcggcgttctgcgcgacggacccgctgcggctgggctc 311 ||||| || |||||| ||||||||||||||||||| |||||||||||||||| ||| Sbjct: 276 ggcggtggcggtggcggcgctggcggcgttctgcgggacggacccgctgcggacggggag 335 Query: 312 catggtggacttcccgggcttcg 334 ||||||||||||||||||||||| Sbjct: 336 catggtggacttcccgggcttcg 358
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 93.7 bits (47), Expect = 4e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 252 ggcggcggtggtggcagcgctggcggcgttctgcgcgacggacccgctgcggctgggctc 311 ||||| || |||||| ||||||||||||||||||| |||||||||||||||| ||| Sbjct: 30636988 ggcggtggcggtggcggcgctggcggcgttctgcgggacggacccgctgcggacggggag 30636929 Query: 312 catggtggacttcccgggcttcg 334 ||||||||||||||||||||||| Sbjct: 30636928 catggtggacttcccgggcttcg 30636906 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cgcggcggcggtggtggcagc 269 ||||||||||||||||||||| Sbjct: 12335496 cgcggcggcggtggtggcagc 12335476 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggtggccgcggcggcggtggtggc 266 |||||| ||||||||||||||||| Sbjct: 25261055 ggtggcggcggcggcggtggtggc 25261078
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 93.7 bits (47), Expect = 4e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 252 ggcggcggtggtggcagcgctggcggcgttctgcgcgacggacccgctgcggctgggctc 311 ||||| || |||||| ||||||||||||||||||| |||||||||||||||| ||| Sbjct: 125404 ggcggtggcggtggcggcgctggcggcgttctgcgggacggacccgctgcggacggggag 125463 Query: 312 catggtggacttcccgggcttcg 334 ||||||||||||||||||||||| Sbjct: 125464 catggtggacttcccgggcttcg 125486
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 93.7 bits (47), Expect = 4e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 252 ggcggcggtggtggcagcgctggcggcgttctgcgcgacggacccgctgcggctgggctc 311 ||||| || |||||| ||||||||||||||||||| |||||||||||||||| ||| Sbjct: 30728410 ggcggtggcggtggcggcgctggcggcgttctgcgggacggacccgctgcggacggggag 30728351 Query: 312 catggtggacttcccgggcttcg 334 ||||||||||||||||||||||| Sbjct: 30728350 catggtggacttcccgggcttcg 30728328 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cgcggcggcggtggtggcagc 269 ||||||||||||||||||||| Sbjct: 12332259 cgcggcggcggtggtggcagc 12332239 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggtggccgcggcggcggtggtggc 266 |||||| ||||||||||||||||| Sbjct: 25352364 ggtggcggcggcggcggtggtggc 25352387
>dbj|AK111876.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046K17, full insert sequence Length = 1571 Score = 93.7 bits (47), Expect = 4e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 252 ggcggcggtggtggcagcgctggcggcgttctgcgcgacggacccgctgcggctgggctc 311 ||||| || |||||| ||||||||||||||||||| |||||||||||||||| ||| Sbjct: 215 ggcggtggcggtggcggcgctggcggcgttctgcgggacggacccgctgcggacggggag 274 Query: 312 catggtggacttcccgggcttcg 334 ||||||||||||||||||||||| Sbjct: 275 catggtggacttcccgggcttcg 297
>dbj|AK099001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102B14, full insert sequence Length = 1570 Score = 93.7 bits (47), Expect = 4e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 252 ggcggcggtggtggcagcgctggcggcgttctgcgcgacggacccgctgcggctgggctc 311 ||||| || |||||| ||||||||||||||||||| |||||||||||||||| ||| Sbjct: 229 ggcggtggcggtggcggcgctggcggcgttctgcgggacggacccgctgcggacggggag 288 Query: 312 catggtggacttcccgggcttcg 334 ||||||||||||||||||||||| Sbjct: 289 catggtggacttcccgggcttcg 311
>gb|BT018847.1| Zea mays clone EL01N0555B09.d mRNA sequence Length = 1568 Score = 83.8 bits (42), Expect = 4e-13 Identities = 99/118 (83%) Strand = Plus / Plus Query: 225 gatggcgtcggcgagcgtggtggccgcggcggcggtggtggcagcgctggcggcgttctg 284 |||||||||| || | ||||||||||||||| | || |||| | |||||||||||||| Sbjct: 116 gatggcgtcgccgggggtggtggccgcggcgctgctgatggcggtcctggcggcgttctg 175 Query: 285 cgcgacggacccgctgcggctgggctccatggtggacttcccgggcttcgaggcgcac 342 || ||||| ||||||||| ||||| ||||| || ||||||||| |||||||||||| Sbjct: 176 cggcacggatccgctgcggatgggcagcatggcgggcttcccggggttcgaggcgcac 233
>gb|AY104488.1| Zea mays PCO139959 mRNA sequence Length = 1603 Score = 75.8 bits (38), Expect = 9e-11 Identities = 98/118 (83%) Strand = Plus / Plus Query: 225 gatggcgtcggcgagcgtggtggccgcggcggcggtggtggcagcgctggcggcgttctg 284 |||||||||| || | ||||||||||||||| | ||||||| | |||||||| ||||| Sbjct: 164 gatggcgtcgccgggggtggtggccgcggcgctgctggtggcggtcctggcggcattctg 223 Query: 285 cgcgacggacccgctgcggctgggctccatggtggacttcccgggcttcgaggcgcac 342 | ||||| ||||||||| ||||| ||||| || ||||||||| |||||||||||| Sbjct: 224 tggcacggatccgctgcggatgggcagcatggcgggcttcccggggttcgaggcgcac 281
>emb|AL161893.24| Human DNA sequence from clone RP11-223E19 on chromosome 13 Contains a novel gene, a ubiquitin-conjugating enzyme E2L 3 (UBE2L3) pseudogene and two CpG islands, complete sequence Length = 62043 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 245 tggccgcggcggcggtggtggcagcgctggcggcg 279 |||||||||||||||||||||||||| ||| |||| Sbjct: 41693 tggccgcggcggcggtggtggcagcggtggtggcg 41727
>gb|AC171181.3| Pan troglodytes BAC clone CH251-214F24 from chromosome unknown, complete sequence Length = 165414 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 246 ggccgcggcggcggtggtggcagcgctggcggcg 279 ||||||||||||||||||||||||| ||| |||| Sbjct: 2748 ggccgcggcggcggtggtggcagcggtggtggcg 2781
>emb|AJ330031.1|HSA330031 Homo sapiens genomic sequence surrounding NotI site, clone NR1-WG9R Length = 751 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 246 ggccgcggcggcggtggtggcagcgctggcggcg 279 ||||||||||||||||||||||||| ||| |||| Sbjct: 106 ggccgcggcggcggtggtggcagcggtggtggcg 73
>gb|AF538869.1| Bifidobacterium longum plasmid pDOJH10S, complete sequence Length = 3661 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 54 cgcccctcgcgtcgtcccgcccgcgcatc 82 |||||||||||||||||||| |||||||| Sbjct: 2647 cgcccctcgcgtcgtcccgcacgcgcatc 2675
>gb|DQ123820.1| Shuttle vector pDOJHR, complete sequence Length = 8596 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 54 cgcccctcgcgtcgtcccgcccgcgcatc 82 |||||||||||||||||||| |||||||| Sbjct: 7582 cgcccctcgcgtcgtcccgcacgcgcatc 7610
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 247 gccgcggcggcggtggtggcagcgctgg 274 |||||||||||||||||||| ||||||| Sbjct: 101887 gccgcggcggcggtggtggcggcgctgg 101914
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 247 gccgcggcggcggtggtggcagcgctgg 274 |||||||||||||||||||| ||||||| Sbjct: 12788 gccgcggcggcggtggtggcggcgctgg 12815
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 48.1 bits (24), Expect = 0.020 Identities = 27/28 (96%) Strand = Plus / Plus Query: 247 gccgcggcggcggtggtggcagcgctgg 274 |||||||||||||||||||| ||||||| Sbjct: 297691 gccgcggcggcggtggtggcggcgctgg 297718
>ref|XM_595075.2| PREDICTED: Bos taurus similar to Clathrin coat assembly protein AP180 (Clathrin coat associated protein AP180) (91 kDa synaptosomal-associated protein) (LOC516917), mRNA Length = 2514 Score = 46.1 bits (23), Expect = 0.078 Identities = 26/27 (96%) Strand = Plus / Minus Query: 244 gtggccgcggcggcggtggtggcagcg 270 ||||| ||||||||||||||||||||| Sbjct: 1583 gtggcggcggcggcggtggtggcagcg 1557
>gb|AC136999.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009L15, complete sequence Length = 137570 Score = 46.1 bits (23), Expect = 0.078 Identities = 23/23 (100%) Strand = Plus / Plus Query: 249 cgcggcggcggtggtggcagcgc 271 ||||||||||||||||||||||| Sbjct: 80830 cgcggcggcggtggtggcagcgc 80852
>gb|AE012480.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 388 of 460 of the complete genome Length = 11838 Score = 46.1 bits (23), Expect = 0.078 Identities = 23/23 (100%) Strand = Plus / Minus Query: 238 agcgtggtggccgcggcggcggt 260 ||||||||||||||||||||||| Sbjct: 6903 agcgtggtggccgcggcggcggt 6881
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 46.1 bits (23), Expect = 0.078 Identities = 23/23 (100%) Strand = Plus / Minus Query: 238 agcgtggtggccgcggcggcggt 260 ||||||||||||||||||||||| Sbjct: 667361 agcgtggtggccgcggcggcggt 667339
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.078 Identities = 23/23 (100%) Strand = Plus / Plus Query: 249 cgcggcggcggtggtggcagcgc 271 ||||||||||||||||||||||| Sbjct: 16949793 cgcggcggcggtggtggcagcgc 16949815 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cggcggcggtggtggcagcg 270 |||||||||||||||||||| Sbjct: 18131570 cggcggcggtggtggcagcg 18131551
>gb|AY858584.1| Oryza sativa (japonica cultivar-group) diacylglycerol acyltransferase (DAGAT) mRNA, complete cds Length = 2103 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtgg 262 |||||||||||||||||||||| Sbjct: 376 gtggtggccgcggcggcggtgg 397
>ref|NM_197547.1| Oryza sativa (japonica cultivar-group) putative DNA-binding protein (OSJNBa0040D23.9), mRNA Length = 939 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcggcg 279 ||||||||||||||||| ||| |||||||| Sbjct: 209 gcggcggcggtggtggcggcggtggcggcg 238
>gb|AF285156.1| Gallus gallus topoisomerase II beta-2 (TOP2B) mRNA, partial cds Length = 792 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtggcagcg 270 |||||||| ||||||| ||||||||||||| Sbjct: 35 gtggtggcggcggcggtggtggtggcagcg 64
>gb|AY762116.1| Chlamydomonas reinhardtii thioredoxin-like protein mRNA, complete cds Length = 2636 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtggc 266 |||||||| ||||||||||||||||| Sbjct: 1817 gtggtggcggcggcggcggtggtggc 1842
>ref|XM_363827.1| Magnaporthe grisea 70-15 hypothetical protein (MG01753.4) partial mRNA Length = 1761 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 243 ggtggccgcggcggcggtggtggcag 268 |||||| ||||||||||||||||||| Sbjct: 657 ggtggcggcggcggcggtggtggcag 632
>ref|XM_797386.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053509889.9) partial mRNA Length = 1747 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 cggcggcggtggtggcagcgctggcggcgt 280 |||||||||||||||| || |||||||||| Sbjct: 597 cggcggcggtggtggcggcactggcggcgt 568
>ref|XM_799324.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053506645.9) partial mRNA Length = 5905 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 cggcggcggtggtggcagcgctggcggcgt 280 |||||||||||||||| || |||||||||| Sbjct: 1464 cggcggcggtggtggcggcactggcggcgt 1435
>ref|XM_801652.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053511105.29) partial mRNA Length = 7036 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Minus Query: 251 cggcggcggtggtggcagcgctggcggcgt 280 |||||||||||||||| || |||||||||| Sbjct: 4962 cggcggcggtggtggcggcactggcggcgt 4933
>gb|AC123520.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034O04, complete sequence Length = 164882 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 ggccgcggcggcggtggtggca 267 |||||||||||||||||||||| Sbjct: 131203 ggccgcggcggcggtggtggca 131182
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Minus Query: 250 gcggcggcggtggtggcagcgctggcggcg 279 ||||||||||||||| |||||| ||||||| Sbjct: 657909 gcggcggcggtggtgacagcgccggcggcg 657880
>emb|AL139398.20| Human DNA sequence from clone RP11-528B10 on chromosome Xp11.21-11.23, complete sequence Length = 125999 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcggcg 279 ||||||||||||||||| ||| |||||||| Sbjct: 67534 gcggcggcggtggtggcggcggtggcggcg 67563
>ref|XM_971000.1| PREDICTED: Tribolium castaneum hypothetical protein LOC655629 (LOC655629), mRNA Length = 950 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtggc 266 |||||||| ||||||||||||||||| Sbjct: 371 gtggtggcggcggcggcggtggtggc 396
>emb|AJ298998.1|DVI298998 Drosophila virilis mRNA for NONA protein Length = 2096 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtggc 266 |||||||| ||||||||||||||||| Sbjct: 1826 gtggtggcggcggcggcggtggtggc 1851
>gb|AC074196.14| Oryza sativa chromosome 10 BAC OSJNBa0040D23 genomic sequence, complete sequence Length = 134102 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Minus Query: 250 gcggcggcggtggtggcagcgctggcggcg 279 ||||||||||||||||| ||| |||||||| Sbjct: 37865 gcggcggcggtggtggcggcggtggcggcg 37836
>ref|NM_205082.1| Gallus gallus topoisomerase (DNA) II beta 180kDa (TOP2B), mRNA Length = 5430 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtggcagcg 270 |||||||| ||||||| ||||||||||||| Sbjct: 237 gtggtggcggcggcggtggtggtggcagcg 266
>ref|NM_021120.1| Homo sapiens discs, large homolog 3 (neuroendocrine-dlg, Drosophila) (DLG3), mRNA Length = 3100 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcggcg 279 ||||||||||||||||| ||| |||||||| Sbjct: 154 gcggcggcggtggtggcggcggtggcggcg 183
>gb|AY013326.1| Drosophila virilis strain A no-on transient A (nonA) gene, partial cds Length = 424 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtggc 266 |||||||| ||||||||||||||||| Sbjct: 216 gtggtggcggcggcggcggtggtggc 241
>gb|AY013319.1| Drosophila virilis strain A33 no-on transient A (nonA) gene, partial cds Length = 424 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtggc 266 |||||||| ||||||||||||||||| Sbjct: 216 gtggtggcggcggcggcggtggtggc 241
>gb|AY013317.1| Drosophila virilis strain A12 no-on transient A (nonA) gene, partial cds Length = 421 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtggc 266 |||||||| ||||||||||||||||| Sbjct: 216 gtggtggcggcggcggcggtggtggc 241
>gb|AY013316.1| Drosophila virilis strain A11 no-on transient A (nonA) gene, partial cds Length = 424 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtggc 266 |||||||| ||||||||||||||||| Sbjct: 216 gtggtggcggcggcggcggtggtggc 241
>gb|AF119708.1|AF119708 Mesocestoides sp. AC9802 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 559 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 240 cgtggtggccgcggcggcggtggtgg 265 |||||||||||||||||||| ||||| Sbjct: 315 cgtggtggccgcggcggcggcggtgg 340
>gb|AF119707.1|AF119707 Mesocestoides sp. AC9701 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 559 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 240 cgtggtggccgcggcggcggtggtgg 265 |||||||||||||||||||| ||||| Sbjct: 315 cgtggtggccgcggcggcggcggtgg 340
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 ggccgcggcggcggtggtggca 267 |||||||||||||||||||||| Sbjct: 5921319 ggccgcggcggcggtggtggca 5921298 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 8183574 gtggtggcggcggcggcggtggtgg 8183550
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Minus Query: 250 gcggcggcggtggtggcagcgctggcggcg 279 ||||||||||||||||| ||| |||||||| Sbjct: 20397717 gcggcggcggtggtggcggcggtggcggcg 20397688 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 ggccgcggcggcggtggtggc 266 ||||||||||||||||||||| Sbjct: 3116031 ggccgcggcggcggtggtggc 3116051 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ggtggccgcggcggcggtgg 262 |||||||||||||||||||| Sbjct: 18163344 ggtggccgcggcggcggtgg 18163325
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.31 Identities = 31/34 (91%) Strand = Plus / Minus Query: 243 ggtggccgcggcggcggtggtggcagcgctggcg 276 |||||| |||||||||| ||||||||||| |||| Sbjct: 19885052 ggtggcggcggcggcggcggtggcagcgcgggcg 19885019 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 231 gtcggcgagcgtggtggccgcggcggcgg 259 ||||||| |||||||||||||||||||| Sbjct: 20515983 gtcggcgtccgtggtggccgcggcggcgg 20515955 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||||||||||||| ||| |||||| Sbjct: 19648616 gcggcggcggtggtggcggcggtggcgg 19648643 Score = 40.1 bits (20), Expect = 4.8 Identities = 43/48 (89%), Gaps = 2/48 (4%) Strand = Plus / Minus Query: 220 agggagatggcgtcggcgagcgtggtggc-cgcggcggcggtggtggc 266 |||||||||||||||||| |||| || || ||||| |||||||||||| Sbjct: 17553868 agggagatggcgtcggcg-gcgttgtcgctcgcggtggcggtggtggc 17553822 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 ggcgtcggcgagcgtggtggccgc 251 ||||| |||||||||||||||||| Sbjct: 15214936 ggcgtgggcgagcgtggtggccgc 15214913
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 245 tggccgcggcggcggtggtggcagcg 270 |||| ||||||||||||||||||||| Sbjct: 13466135 tggcggcggcggcggtggtggcagcg 13466110 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 234 ggcgagcgtggtggccgcggcggcggtg 261 ||||||||||| || ||||||||||||| Sbjct: 27585478 ggcgagcgtggcggtcgcggcggcggtg 27585451 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 gcgtggtggccgcggcggcg 258 |||||||||||||||||||| Sbjct: 18720667 gcgtggtggccgcggcggcg 18720648 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 tggtggccgcggcggcggtggtgg 265 ||||||| |||||||||||||||| Sbjct: 13324071 tggtggcagcggcggcggtggtgg 13324094 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggtggccgcggcggcggtggtggc 266 ||||||||||||||| |||||||| Sbjct: 1387050 ggtggccgcggcggccgtggtggc 1387073
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 234 ggcgagcgtggtggccgcggcggcgg 259 |||| ||||||||||||||||||||| Sbjct: 11163103 ggcgcgcgtggtggccgcggcggcgg 11163078 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 238 agcgtggtggccgcggcggcggtgg 262 |||| |||||||||||||||||||| Sbjct: 28332630 agcgcggtggccgcggcggcggtgg 28332654 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 gcgtggtggccgcggcggcgg 259 ||||||||||||||||||||| Sbjct: 1275320 gcgtggtggccgcggcggcgg 1275300 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ggtggccgcggcggcggtgg 262 |||||||||||||||||||| Sbjct: 32208079 ggtggccgcggcggcggtgg 32208060 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 245 tggccgcggcggcggtggtggcag 268 ||||||||||||||| |||||||| Sbjct: 22155066 tggccgcggcggcggaggtggcag 22155043 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 ggtggccgcggcggcggtggtggc 266 |||||| ||||||||||||||||| Sbjct: 3853622 ggtggcggcggcggcggtggtggc 3853599 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggtggccgcggcggcggtggtggc 266 |||||| ||||||||||||||||| Sbjct: 2757810 ggtggcggcggcggcggtggtggc 2757833
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 247 gccgcggcggcggtggtggcag 268 |||||||||||||||||||||| Sbjct: 5867262 gccgcggcggcggtggtggcag 5867241 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 cgtggtggccgcggcggcgg 259 |||||||||||||||||||| Sbjct: 26085772 cgtggtggccgcggcggcgg 26085753 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 cgtggtggccgcggcggcgg 259 |||||||||||||||||||| Sbjct: 21111501 cgtggtggccgcggcggcgg 21111520
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Minus Query: 230 cgtcggcgagcgtggtggccgcggcggcgg 259 |||||||| ||| ||||||||||||||||| Sbjct: 742414 cgtcggcgggcgcggtggccgcggcggcgg 742385 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cggcgagcgtggtggccgcg 252 |||||||||||||||||||| Sbjct: 2270383 cggcgagcgtggtggccgcg 2270402
>dbj|AP003052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0016I09 Length = 148517 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 247 gccgcggcggcggtggtggcag 268 |||||||||||||||||||||| Sbjct: 71003 gccgcggcggcggtggtggcag 70982
>dbj|AP003506.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0428A03 Length = 136799 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 245 tggccgcggcggcggtggtggcagcg 270 |||| ||||||||||||||||||||| Sbjct: 77559 tggcggcggcggcggtggtggcagcg 77534
>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0034B12 Length = 124083 Score = 44.1 bits (22), Expect = 0.31 Identities = 31/34 (91%) Strand = Plus / Minus Query: 243 ggtggccgcggcggcggtggtggcagcgctggcg 276 |||||| |||||||||| ||||||||||| |||| Sbjct: 109492 ggtggcggcggcggcggcggtggcagcgcgggcg 109459
>dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1057_D08 Length = 119557 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 234 ggcgagcgtggtggccgcggcggcgg 259 |||| ||||||||||||||||||||| Sbjct: 82282 ggcgcgcgtggtggccgcggcggcgg 82257
>dbj|AK101828.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068F13, full insert sequence Length = 2862 Score = 44.1 bits (22), Expect = 0.31 Identities = 31/34 (91%) Strand = Plus / Minus Query: 243 ggtggccgcggcggcggtggtggcagcgctggcg 276 |||||| |||||||||| ||||||||||| |||| Sbjct: 406 ggtggcggcggcggcggcggtggcagcgcgggcg 373
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Minus Query: 250 gcggcggcggtggtggcagcgctggcggcg 279 ||||||||||||||||| ||| |||||||| Sbjct: 20408989 gcggcggcggtggtggcggcggtggcggcg 20408960 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 ggccgcggcggcggtggtggc 266 ||||||||||||||||||||| Sbjct: 3115952 ggccgcggcggcggtggtggc 3115972 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ggtggccgcggcggcggtgg 262 |||||||||||||||||||| Sbjct: 18172597 ggtggccgcggcggcggtgg 18172578
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 ggccgcggcggcggtggtggca 267 |||||||||||||||||||||| Sbjct: 5987796 ggccgcggcggcggtggtggca 5987775 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 8254337 gtggtggcggcggcggcggtggtgg 8254313
>gb|U49089.1|HSU49089 Human neuroendocrine-dlg (NE-dlg) mRNA, complete cds Length = 3100 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcggcg 279 ||||||||||||||||| ||| |||||||| Sbjct: 154 gcggcggcggtggtggcggcggtggcggcg 183
>dbj|AB209328.1| Homo sapiens mRNA for synapse-associated protein 102 variant protein Length = 2896 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcggcg 279 ||||||||||||||||| ||| |||||||| Sbjct: 268 gcggcggcggtggtggcggcggtggcggcg 297
>gb|M15766.1|DROPENFSC D.melanogaster pen repeat mRNA, clone p9 Length = 1589 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtggc 266 |||||||| ||||||||||||||||| Sbjct: 945 gtggtggcggcggcggcggtggtggc 970
>emb|AJ304372.1|DVI304372 Drosophila virilis partial nonA gene, exons 3-4, strain 1431 Length = 424 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtggc 266 |||||||| ||||||||||||||||| Sbjct: 216 gtggtggcggcggcggcggtggtggc 241
>gb|M31560.1|DROHRB5 D.melanogaster Hrb98DE locus encoding heterogeneous nuclear ribonucleoprotein isoforms, exon 4 Length = 330 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtggc 266 |||||||| ||||||||||||||||| Sbjct: 83 gtggtggcggcggcggcggtggtggc 108
>dbj|AB007446.1| Gallus gallus mRNA for DNA topoisomeraseII_beta, complete cds Length = 5430 Score = 44.1 bits (22), Expect = 0.31 Identities = 28/30 (93%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtggcagcg 270 |||||||| ||||||| ||||||||||||| Sbjct: 237 gtggtggcggcggcggtggtggtggcagcg 266
>ref|XM_467231.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2240 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 238 agcgtggtggccgcggcggcggtgg 262 |||| |||||||||||||||||||| Sbjct: 872 agcgcggtggccgcggcggcggtgg 848
>ref|XM_463947.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1872 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 gcgtggtggccgcggcggcgg 259 ||||||||||||||||||||| Sbjct: 264 gcgtggtggccgcggcggcgg 284
>gb|AC135503.8| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0117L20 map S2137, complete sequence Length = 125303 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 86929 gtggtggcggcggcggcggtggtgg 86905
>gb|BC098601.1| Danio rerio U2(RNU2) small nuclear RNA auxiliary factor 1, mRNA (cDNA clone MGC:111896 IMAGE:7435352), complete cds Length = 994 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 687 gtggtggcggcggcggcggtggtgg 711
>gb|AY430049.1| Saccharopolyspora erythraea putative acyl carrier protein synthase (acps) gene, complete cds Length = 369 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 222 ggagatggcgtcggcgagcgtggtggccg 250 |||||||||||||||| ||||||||||| Sbjct: 333 ggagatggcgtcggcgttcgtggtggccg 361
>ref|XM_798021.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053505121.9) partial mRNA Length = 3728 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 252 ggcggcggtggtggcagcgctggcggcgt 280 ||||||||||||||| || |||||||||| Sbjct: 956 ggcggcggtggtggcggcactggcggcgt 928
>ref|XM_773582.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_158_77879_78094) partial mRNA Length = 216 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 241 gtggtggccgcggcggcggtggtgg 265 ||||||||||||||||||| ||||| Sbjct: 177 gtggtggccgcggcggcggcggtgg 153
>ref|XM_773583.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_158_77883_78482) partial mRNA Length = 600 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 241 gtggtggccgcggcggcggtggtgg 265 ||||||||||||||||||| ||||| Sbjct: 173 gtggtggccgcggcggcggcggtgg 149
>ref|XM_773584.1| Giardia lamblia ATCC 50803 DEAD/DEAH box RNA helicase protein (GLP_158_79919_77949) partial mRNA Length = 1971 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtgg 265 ||||||||||||||||||| ||||| Sbjct: 1865 gtggtggccgcggcggcggcggtgg 1889
>ref|XM_849954.1| PREDICTED: Canis familiaris similar to Myb protein P42POP (LOC612218), mRNA Length = 1288 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 767 gtggtggcagcggcggcggtggtgg 743
>gb|AC164702.2| Mus musculus BAC clone RP23-402H19 from chromosome 10, complete sequence Length = 208221 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 cagaggaagctgaggggtagttggc 38 ||||||||||||||||| ||||||| Sbjct: 173901 cagaggaagctgaggggcagttggc 173925
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 254 cggcggtggtggcagcgctggcggc 278 ||||||||||||| ||||||||||| Sbjct: 4487431 cggcggtggtggccgcgctggcggc 4487455 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 3602365 gtggtggcggcggcggcggtggtgg 3602389 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggtggccgcggcggcggtggtggc 266 |||||| ||||||||||||||||| Sbjct: 3602349 ggtggcggcggcggcggtggtggc 3602372
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 244 gtggccgcggcggcggtggtg 264 ||||||||||||||||||||| Sbjct: 116568 gtggccgcggcggcggtggtg 116588
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 gtggccgcggcggcggtggtg 264 ||||||||||||||||||||| Sbjct: 163617 gtggccgcggcggcggtggtg 163597
>emb|AJ439060.1|AGA439060 Anopheles gambiae DNA from 2R chromosome, clone 11N17 Length = 147295 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 243 ggtggccgcggcggcggtggtggca 267 |||||| |||||||||||||||||| Sbjct: 30988 ggtggcggcggcggcggtggtggca 31012
>dbj|AK220555.1| Mus musculus mRNA for mKIAA4228 protein Length = 4214 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtggcagcgctggcgg 277 |||| ||| |||| |||||||||||||||| |||||| Sbjct: 2800 gtggcggcggcggtggcggtggtggcagcggtggcgg 2836
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gcggtggtggcagcgctggcg 276 ||||||||||||||||||||| Sbjct: 1994617 gcggtggtggcagcgctggcg 1994597
>gb|AY119224.1| Drosophila melanogaster SD16903 full insert cDNA Length = 1970 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 673 gtggtggcggcggcggcggtggtgg 697
>dbj|AK128363.1| Homo sapiens cDNA FLJ46506 fis, clone THYMU3030752 Length = 3842 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 243 ggtggccgcggcggcggtggtggcagcgctggcggcg 279 |||||| |||| |||||||||||| ||| |||||||| Sbjct: 101 ggtggcggcggtggcggtggtggcggcggtggcggcg 137
>dbj|AB158483.1| Cyanidioschyzon merolae genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, complete sequence, clone:BAC clone H1D17 Length = 98410 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 gaggcgcccctcgcgtcgtcc 70 ||||||||||||||||||||| Sbjct: 49818 gaggcgcccctcgcgtcgtcc 49798
>ref|NM_170374.1| Drosophila melanogaster Heterogeneous nuclear ribonucleoprotein at 98DE CG9983-RF, transcript variant F (Hrb98DE), mRNA Length = 1550 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 904 gtggtggcggcggcggcggtggtgg 928
>ref|NM_170373.1| Drosophila melanogaster Heterogeneous nuclear ribonucleoprotein at 98DE CG9983-RD, transcript variant D (Hrb98DE), mRNA Length = 2269 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 904 gtggtggcggcggcggcggtggtgg 928
>ref|NM_170372.1| Drosophila melanogaster Heterogeneous nuclear ribonucleoprotein at 98DE CG9983-RC, transcript variant C (Hrb98DE), mRNA Length = 2281 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 916 gtggtggcggcggcggcggtggtgg 940
>ref|NM_170371.1| Drosophila melanogaster Heterogeneous nuclear ribonucleoprotein at 98DE CG9983-RE, transcript variant E (Hrb98DE), mRNA Length = 2280 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 915 gtggtggcggcggcggcggtggtgg 939
>ref|NM_170370.1| Drosophila melanogaster Heterogeneous nuclear ribonucleoprotein at 98DE CG9983-RA, transcript variant A (Hrb98DE), mRNA Length = 2292 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 927 gtggtggcggcggcggcggtggtgg 951
>ref|NM_137510.2| Drosophila melanogaster CG30122-RB (CG30122), mRNA Length = 4617 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 3340 gtggtggcggcggcggcggtggtgg 3364
>ref|NM_079819.2| Drosophila melanogaster Heterogeneous nuclear ribonucleoprotein at 98DE CG9983-RB, transcript variant B (Hrb98DE), mRNA Length = 1562 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 916 gtggtggcggcggcggcggtggtgg 940
>gb|AC098565.3| Oryza sativa chromosome 10 clone OSJNBa0028C16, complete sequence Length = 166757 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 ggccgcggcggcggtggtggc 266 ||||||||||||||||||||| Sbjct: 85663 ggccgcggcggcggtggtggc 85683
>gb|AY061448.1| Drosophila melanogaster LD38464 full length cDNA Length = 1934 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 887 gtggtggcggcggcggcggtggtgg 911
>gb|AC099028.1| Drosophila melanogaster, chromosome 2R, region 55F-56X, BAC clone BACR08F09, complete sequence Length = 192358 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 8008 gtggtggcggcggcggcggtggtgg 7984
>ref|XM_679654.1| PREDICTED: Danio rerio similar to Purine-rich element binding protein B, transcript variant 1 (LOC565233), mRNA Length = 1160 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcg 270 ||||||||||||||||||||| Sbjct: 47 gcggcggcggtggtggcagcg 67
>ref|XM_679215.1| PREDICTED: Danio rerio similar to Purine-rich element binding protein B, transcript variant 1 (LOC564840), mRNA Length = 1160 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcg 270 ||||||||||||||||||||| Sbjct: 47 gcggcggcggtggtggcagcg 67
>emb|CR391578.1| Gallus gallus finished cDNA, clone ChEST804l12 Length = 1518 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcg 270 ||||||||||||||||||||| Sbjct: 20 gcggcggcggtggtggcagcg 40
>emb|BX322550.7| Zebrafish DNA sequence from clone DKEY-202N14 in linkage group 5, complete sequence Length = 184426 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 gcggcggcggtggtggcagcg 270 ||||||||||||||||||||| Sbjct: 14034 gcggcggcggtggtggcagcg 14014
>ref|XM_395436.2| PREDICTED: Apis mellifera similar to ENSANGP00000026392 (LOC411969), mRNA Length = 1794 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 617 gtggtggcggcggcggcggtggtgg 641
>gb|AC009850.10|AC009850 Drosophila melanogaster, chromosome 2R, region 55E-55F, BAC clone BACR27L09, complete sequence Length = 173059 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 169039 gtggtggcggcggcggcggtggtgg 169015
>gb|AC009213.5|AC009213 Drosophila melanogaster, chromosome 3R, region 98D-98D, BAC clone BACR09F18, complete sequence Length = 182525 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 142723 gtggtggcggcggcggcggtggtgg 142747
>gb|BT003578.1| Drosophila melanogaster LD24631 full insert cDNA Length = 2519 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 1434 gtggtggcggcggcggcggtggtgg 1458
>ref|XM_218522.3| PREDICTED: Rattus norvegicus similar to Zfp536 protein (LOC292820), mRNA Length = 7584 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 gtggtggccgcggcggcggtg 261 ||||||||||||||||||||| Sbjct: 4265 gtggtggccgcggcggcggtg 4245
>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0029K10, from chromosome 3, complete sequence Length = 135940 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 cgcggcggcggtggtggcagc 269 ||||||||||||||||||||| Sbjct: 105029 cgcggcggcggtggtggcagc 105009
>dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1254_E07 Length = 124028 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 231 gtcggcgagcgtggtggccgcggcggcgg 259 ||||||| |||||||||||||||||||| Sbjct: 33630 gtcggcgtccgtggtggccgcggcggcgg 33602
>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0575F10 Length = 150462 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 gcgtggtggccgcggcggcgg 259 ||||||||||||||||||||| Sbjct: 106411 gcgtggtggccgcggcggcgg 106391
>gb|AC113458.10| Mus musculus chromosome 3, clone RP23-372O21, complete sequence Length = 232529 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 ccgagaggcccaacaagcaga 185 ||||||||||||||||||||| Sbjct: 224169 ccgagaggcccaacaagcaga 224149
>gb|BC082769.1| Mus musculus AT motif binding factor 1, mRNA (cDNA clone IMAGE:4922087), partial cds Length = 2995 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtggcagcgctggcgg 277 |||| ||| |||| |||||||||||||||| |||||| Sbjct: 2275 gtggcggcggcggtggcggtggtggcagcggtggcgg 2311
>dbj|AP006754.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0018H03, complete sequence Length = 94450 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 gcgtggtggccgcggcggcgg 259 ||||||||||||||||||||| Sbjct: 49349 gcgtggtggccgcggcggcgg 49329
>dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1743_B12 Length = 175645 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 238 agcgtggtggccgcggcggcggtgg 262 |||| |||||||||||||||||||| Sbjct: 124387 agcgcggtggccgcggcggcggtgg 124411
>ref|XM_321528.2| Anopheles gambiae str. PEST ENSANGP00000017400 (ENSANGG00000014911), partial mRNA Length = 4938 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 243 ggtggccgcggcggcggtggtggca 267 |||||| |||||||||||||||||| Sbjct: 4486 ggtggcggcggcggcggtggtggca 4510
>dbj|AK065840.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036C22, full insert sequence Length = 2240 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 238 agcgtggtggccgcggcggcggtgg 262 |||| |||||||||||||||||||| Sbjct: 872 agcgcggtggccgcggcggcggtgg 848
>ref|NM_007496.1| Mus musculus AT motif binding factor 1 (Atbf1), mRNA Length = 12047 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtggcagcgctggcgg 277 |||| ||| |||| |||||||||||||||| |||||| Sbjct: 11337 gtggcggcggcggtggcggtggtggcagcggtggcgg 11373
>gb|AE003766.2| Drosophila melanogaster chromosome 3R, section 104 of 118 of the complete sequence Length = 232302 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 34113 gtggtggcggcggcggcggtggtgg 34137
>gb|AE003798.3| Drosophila melanogaster chromosome 2R, section 52 of 73 of the complete sequence Length = 242365 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 4472 gtggtggcggcggcggcggtggtgg 4448
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 gcggtggtggcagcgctggcg 276 ||||||||||||||||||||| Sbjct: 2014476 gcggtggtggcagcgctggcg 2014456
>gb|AC004429.1|AC004429 Drosophila melanogaster DNA sequence (P1 DS01552 (D182)), complete sequence Length = 51536 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 3047 gtggtggcggcggcggcggtggtgg 3023
>emb|AL954142.8| Zebrafish DNA sequence from clone CH211-214P13, complete sequence Length = 238837 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 36299 gtggtggcggcggcggcggtggtgg 36275
>emb|AL954191.5| Zebrafish DNA sequence from clone CH211-230G14, complete sequence Length = 151595 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcg 270 ||||||||||||||||||||| Sbjct: 14997 gcggcggcggtggtggcagcg 15017
>dbj|AP006667.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT31L14, TM0366, complete sequence Length = 100936 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 gcggcggcggtggtggcagcg 270 ||||||||||||||||||||| Sbjct: 93801 gcggcggcggtggtggcagcg 93781
>dbj|AP006654.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT31E21, TM0340, complete sequence Length = 120480 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 gcggcggcggtggtggcagcg 270 ||||||||||||||||||||| Sbjct: 80798 gcggcggcggtggtggcagcg 80778
>dbj|AP006419.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT43O18, TM0307, complete sequence Length = 119858 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcg 270 ||||||||||||||||||||| Sbjct: 42329 gcggcggcggtggtggcagcg 42349
>dbj|AP004929.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT06J16, TM0083, complete sequence Length = 120016 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcg 270 ||||||||||||||||||||| Sbjct: 63688 gcggcggcggtggtggcagcg 63708
>dbj|D26046.1|MUSATMBF Mouse mRNA for AT motif-binding factor (ATBF1), complete cds Length = 12047 Score = 42.1 bits (21), Expect = 1.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtggcagcgctggcgg 277 |||| ||| |||| |||||||||||||||| |||||| Sbjct: 11337 gtggcggcggcggtggcggtggtggcagcggtggcgg 11373
>dbj|AP002986.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-121M22, complete sequence Length = 157963 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 241 gtggtggccgcggcggcggtggtgg 265 |||||||| |||||||||||||||| Sbjct: 116452 gtggtggcggcggcggcggtggtgg 116428
>gb|BC103753.1| Homo sapiens RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)), transcript variant 1, mRNA (cDNA clone MGC:117312 IMAGE:6182358), complete cds Length = 1614 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 1020 gcggcggtggtggtggcagcggtggcgg 1047
>gb|AC118688.10| Mus musculus chromosome 5, clone RP23-302F24, complete sequence Length = 176001 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ccgagaggcccaacaagcag 184 |||||||||||||||||||| Sbjct: 51013 ccgagaggcccaacaagcag 51032
>ref|XM_550566.1| Oryza sativa (japonica cultivar-group), mRNA Length = 525 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggtggccgcggcggcggtggtggc 266 ||||||||||||||| |||||||| Sbjct: 70 ggtggccgcggcggccgtggtggc 93
>gb|AC150428.3| Branchiostoma floridae clone CH302-86J11, complete sequence Length = 193518 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcggcggcggtggtggcagc 269 |||||||||||||||||||| Sbjct: 136352 gcggcggcggtggtggcagc 136333
>gb|AC168882.3| Mus musculus BAC clone RP23-80D1 from chromosome 9, complete sequence Length = 210475 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 ccgagaggcccaacaagcag 184 |||||||||||||||||||| Sbjct: 138656 ccgagaggcccaacaagcag 138637
>ref|XM_480300.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1361 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 232 tcggcgagcgtggtggccgcggcggcgg 259 |||||||||| ||| ||||||||||||| Sbjct: 336 tcggcgagcgaggtcgccgcggcggcgg 363
>ref|XM_507146.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1590_E05.28 mRNA Length = 1473 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 232 tcggcgagcgtggtggccgcggcggcgg 259 |||||||||| ||| ||||||||||||| Sbjct: 339 tcggcgagcgaggtcgccgcggcggcgg 366
>ref|XM_469068.1| Oryza sativa (japonica cultivar-group), mRNA Length = 912 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggtggccgcggcggcggtggtggc 266 |||||| ||||||||||||||||| Sbjct: 82 ggtggcggcggcggcggtggtggc 105
>ref|XM_467942.1| Oryza sativa (japonica cultivar-group), mRNA Length = 802 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ggtggccgcggcggcggtgg 262 |||||||||||||||||||| Sbjct: 339 ggtggccgcggcggcggtgg 320
>ref|XM_464289.1| Oryza sativa (japonica cultivar-group), mRNA Length = 546 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggtggccgcggcggcggtggtggc 266 |||||| ||||||||||||||||| Sbjct: 198 ggtggcggcggcggcggtggtggc 221
>ref|NM_197133.1| Oryza sativa (japonica cultivar-group) putative chloroplast inner envelope protein (OSJNBa0051D19.7), mRNA Length = 2967 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ggtggccgcggcggcggtgg 262 |||||||||||||||||||| Sbjct: 291 ggtggccgcggcggcggtgg 310
>ref|NM_193483.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 cgtggtggccgcggcggcgg 259 |||||||||||||||||||| Sbjct: 300 cgtggtggccgcggcggcgg 281
>gb|AC093473.6| Mus musculus chromosome 5, clone RP23-54H12, complete sequence Length = 208876 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcggcggcggtggtggcagc 269 |||||||||||||||||||| Sbjct: 69115 gcggcggcggtggtggcagc 69096
>gb|AC120535.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0092N01, complete sequence Length = 161741 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggtggccgcggcggcggtggtggc 266 |||||| ||||||||||||||||| Sbjct: 157031 ggtggcggcggcggcggtggtggc 157054
>gb|AC134443.3| Mus musculus BAC clone RP24-107B13 from chromosome 8, complete sequence Length = 182604 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ccgagaggcccaacaagcag 184 |||||||||||||||||||| Sbjct: 37797 ccgagaggcccaacaagcag 37816
>gb|AC105767.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B11, complete sequence Length = 103615 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cggcggcggtggtggcagcg 270 |||||||||||||||||||| Sbjct: 12752 cggcggcggtggtggcagcg 12733
>gb|AY706205.1| Mus musculus Brn3a (Pou4f1) mRNA, complete cds Length = 2616 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 ggccgcggcggcggtggtgg 265 |||||||||||||||||||| Sbjct: 1004 ggccgcggcggcggtggtgg 1023
>gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0039A21, complete sequence Length = 139074 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cggcggcggtggtggcagcg 270 |||||||||||||||||||| Sbjct: 98825 cggcggcggtggtggcagcg 98806
>ref|XM_606583.2| PREDICTED: Bos taurus similar to zinc finger, CCHC domain containing 14 (LOC528171), mRNA Length = 3759 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagc 269 |||||||||||||||||||| Sbjct: 3101 gcggcggcggtggtggcagc 3120
>gb|AC131129.4| Rattus norvegicus 17 BAC CH230-15O20 (Children's Hospital Oakland Research Institute) complete sequence Length = 232401 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ccgagaggcccaacaagcag 184 |||||||||||||||||||| Sbjct: 3624 ccgagaggcccaacaagcag 3643
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 gcggtggtggcagcgctggcggcg 279 ||||||||||| |||||||||||| Sbjct: 2241478 gcggtggtggcggcgctggcggcg 2241455
>ref|XM_364908.1| Magnaporthe grisea 70-15 predicted protein (MG09753.4) partial mRNA Length = 501 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 tggtggccgcggcggcggtggtgg 265 ||||||| |||||||||||||||| Sbjct: 321 tggtggcggcggcggcggtggtgg 344
>ref|XM_368589.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00655.4) partial mRNA Length = 1497 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagc 269 |||||||||||||||||||| Sbjct: 314 gcggcggcggtggtggcagc 333
>gb|AC138004.3| Oryza sativa chromosome 3 BAC OSJNBb0023J24 genomic sequence, complete sequence Length = 130193 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 ggtggccgcggcggcggtggtggc 266 |||||| ||||||||||||||||| Sbjct: 41653 ggtggcggcggcggcggtggtggc 41630
>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0065A15, complete sequence Length = 168806 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||||||||||||| ||| |||||| Sbjct: 131691 gcggcggcggtggtggcggcggtggcgg 131718
>ref|NM_011143.3| Mus musculus POU domain, class 4, transcription factor 1 (Pou4f1), mRNA Length = 3801 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 ggccgcggcggcggtggtgg 265 |||||||||||||||||||| Sbjct: 1004 ggccgcggcggcggtggtgg 1023
>gb|AC127266.4| Mus musculus BAC clone RP24-347B12 from chromosome 5, complete sequence Length = 185232 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcggcggcggtggtggcagc 269 |||||||||||||||||||| Sbjct: 2020 gcggcggcggtggtggcagc 2001
>gb|AY635580.1| Homo sapiens breast cancer antigen 10829 mRNA, partial sequence Length = 739 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 252 gcggcggtggtggtggcagcggtggcgg 279
>ref|XM_957867.1| Neurospora crassa OR74A hypothetical protein (NCU07839.1) partial mRNA Length = 1956 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggtggccgcggcggcggtggtggc 266 |||||||| ||||||||||||||| Sbjct: 1879 ggtggccgtggcggcggtggtggc 1902
>gb|AY217089.1| Mus musculus neuronal transcription factor BRN3a (Pou4f1) gene, complete cds; alternatively spliced Length = 11036 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 ggccgcggcggcggtggtgg 265 |||||||||||||||||||| Sbjct: 8039 ggccgcggcggcggtggtgg 8058
>ref|XM_328544.1| Neurospora crassa OR74A hypothetical protein (NCU07839.1) partial mRNA Length = 1956 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggtggccgcggcggcggtggtggc 266 |||||||| ||||||||||||||| Sbjct: 1879 ggtggccgtggcggcggtggtggc 1902
>ref|NM_018814.3| Mus musculus pecanex homolog (Drosophila) (Pcnx), mRNA Length = 12139 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 |||||||||| || |||||||||||||| Sbjct: 33 gcggcggcggcggcggcagcgctggcgg 60
>ref|NM_011363.1| Mus musculus SH2-B PH domain containing signaling mediator 1 (Sh2bpsm1), mRNA Length = 2772 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggtggtggcagcgctggcgg 277 |||||||||||||||||||| Sbjct: 62 ggtggtggcagcgctggcgg 43
>gb|AC125322.4| Mus musculus BAC clone RP23-407J24 from chromosome 7, complete sequence Length = 217912 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ggtggtggcagcgctggcgg 277 |||||||||||||||||||| Sbjct: 131507 ggtggtggcagcgctggcgg 131526
>ref|XM_653458.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0946.2), mRNA Length = 2325 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ggtgcagaggaagctgaggg 29 |||||||||||||||||||| Sbjct: 2085 ggtgcagaggaagctgaggg 2104
>gb|AC158364.4| Mus musculus BAC clone RP23-187J8 from chromosome 8, complete sequence Length = 208153 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ccgagaggcccaacaagcag 184 |||||||||||||||||||| Sbjct: 21199 ccgagaggcccaacaagcag 21218
>gb|AC111085.11| Mus musculus chromosome 9, clone RP23-146C24, complete sequence Length = 220622 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ccgagaggcccaacaagcag 184 |||||||||||||||||||| Sbjct: 142431 ccgagaggcccaacaagcag 142450
>gb|AC139223.8| Mus musculus chromosome 8, clone RP24-322F24, complete sequence Length = 180051 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ccgagaggcccaacaagcag 184 |||||||||||||||||||| Sbjct: 51267 ccgagaggcccaacaagcag 51286
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 gcggcggtggtggcagcgct 272 |||||||||||||||||||| Sbjct: 447161 gcggcggtggtggcagcgct 447142
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome Length = 138390 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 cgcggcggcggtggtggcag 268 |||||||||||||||||||| Sbjct: 54122 cgcggcggcggtggtggcag 54141
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ggcggcggtggtggcagcgc 271 |||||||||||||||||||| Sbjct: 1206090 ggcggcggtggtggcagcgc 1206071 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 tggtggccgcggcggcggtggtgg 265 ||||||||||||| |||||||||| Sbjct: 869724 tggtggccgcggctgcggtggtgg 869747
>gb|AC124478.5| Mus musculus BAC clone RP24-105I8 from chromosome 8, complete sequence Length = 159317 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 |||| |||||||||||||||| |||||| Sbjct: 3204 gcggtggcggtggtggcagcggtggcgg 3231
>gb|BC060729.1| Mus musculus AT motif binding factor 1, mRNA (cDNA clone IMAGE:6408463), partial cds Length = 5293 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 |||| |||||||||||||||| |||||| Sbjct: 4559 gcggtggcggtggtggcagcggtggcgg 4586
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ggtggccgcggcggcggtgg 262 |||||||||||||||||||| Sbjct: 49784 ggtggccgcggcggcggtgg 49803
>ref|XM_538645.2| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A0, transcript variant 1 (LOC481524), mRNA Length = 1775 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||||||||||||| ||| |||||| Sbjct: 8 gcggcggcggtggtggcggcggtggcgg 35
>ref|XM_845859.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A0, transcript variant 2 (LOC481524), mRNA Length = 1961 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||||||||||||| ||| |||||| Sbjct: 8 gcggcggcggtggtggcggcggtggcgg 35
>gb|BC011422.1| Mus musculus SH2-B PH domain containing signaling mediator 1, mRNA (cDNA clone IMAGE:3156603), containing frame-shift errors Length = 2960 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggtggtggcagcgctggcgg 277 |||||||||||||||||||| Sbjct: 119 ggtggtggcagcgctggcgg 100
>gb|AC121997.3| Mus musculus BAC clone RP24-312G4 from chromosome 14, complete sequence Length = 143266 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ggccgcggcggcggtggtgg 265 |||||||||||||||||||| Sbjct: 72105 ggccgcggcggcggtggtgg 72086
>gb|AC122388.5| Mus musculus BAC clone RP24-80J12 from chromosome 16, complete sequence Length = 214268 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ccgagaggcccaacaagcag 184 |||||||||||||||||||| Sbjct: 95453 ccgagaggcccaacaagcag 95472
>gb|AC122873.5| Mus musculus BAC clone RP23-110K10 from 8, complete sequence Length = 199474 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 |||| |||||||||||||||| |||||| Sbjct: 108749 gcggtggcggtggtggcagcggtggcgg 108776
>gb|AC125207.5| Mus musculus BAC clone RP23-220C16 from 8, complete sequence Length = 189936 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ccgagaggcccaacaagcag 184 |||||||||||||||||||| Sbjct: 122579 ccgagaggcccaacaagcag 122598
>gb|AC125205.4| Mus musculus BAC clone RP23-238I2 from 14, complete sequence Length = 205957 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ccgagaggcccaacaagcag 184 |||||||||||||||||||| Sbjct: 141022 ccgagaggcccaacaagcag 141041
>gb|AC121970.2| Mus musculus BAC clone RP24-275B23 from 1, complete sequence Length = 179612 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 ccgagaggcccaacaagcag 184 |||||||||||||||||||| Sbjct: 177429 ccgagaggcccaacaagcag 177410
>gb|BC051978.1| Mus musculus SH2-B PH domain containing signaling mediator 1, mRNA (cDNA clone MGC:62271 IMAGE:6401205), complete cds Length = 2902 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggtggtggcagcgctggcgg 277 |||||||||||||||||||| Sbjct: 200 ggtggtggcagcgctggcgg 181
>gb|AC118240.8| Mus musculus chromosome 16, clone RP23-186J5, complete sequence Length = 222869 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 ccgagaggcccaacaagcag 184 |||||||||||||||||||| Sbjct: 157422 ccgagaggcccaacaagcag 157403
>gb|AC091297.3| Sus scrofa clone RP44-52N13, complete sequence Length = 142057 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 ggtggccgcggcggcggtggtggc 266 |||||| ||||||||||||||||| Sbjct: 101208 ggtggcggcggcggcggtggtggc 101185
>gb|AC162930.5| Mus musculus BAC clone RP23-221B16 from chromosome 8, complete sequence Length = 222939 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ccgagaggcccaacaagcag 184 |||||||||||||||||||| Sbjct: 140328 ccgagaggcccaacaagcag 140347
>gb|BC088727.1| Homo sapiens cDNA clone IMAGE:6285074, **** WARNING: chimeric clone **** Length = 6776 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 6137 gcggcggtggtggtggcagcggtggcgg 6164
>emb|AL805961.22| Human DNA sequence from clone RP11-718D19 on chromosome 1, complete sequence Length = 166258 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 298 ctgcggctgggctccatggtggac 321 |||| ||||||||||||||||||| Sbjct: 119073 ctgctgctgggctccatggtggac 119050
>ref|NM_016732.1| Homo sapiens RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)) (RALY), transcript variant 1, mRNA Length = 1589 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 996 gcggcggtggtggtggcagcggtggcgg 1023
>emb|X68045.1|BFHOMEOG B.floridae gene for amphihox3 Length = 3477 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagc 269 |||||||||||||||||||| Sbjct: 1132 gcggcggcggtggtggcagc 1151
>ref|NM_007367.2| Homo sapiens RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)) (RALY), transcript variant 2, mRNA Length = 1541 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 948 gcggcggtggtggtggcagcggtggcgg 975
>emb|AL031668.23|HS64K7 Human DNA sequence from clone RP1-64K7 on chromosome 20q11.21-11.23 Contains the EIF2S2 gene for eukaryotic translation initiation factor 2 subunit 2 (beta, 38kD), a novel gene, the 5' end of a novel gene, the 3' end of the RALY gene for RNA binding protein (autoantigenic, hnRNP-associated with lethal yellow), the RPS2P1 gene for ribosomal protein S2 pseudogene 1 and two CpG islands, complete sequence Length = 139378 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 60853 gcggcggtggtggtggcagcggtggcgg 60880
>ref|XM_783164.1| PREDICTED: Strongylocentrotus purpuratus similar to splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor) (LOC583244), mRNA Length = 3083 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtggcag 268 |||| ||||||||||||||||| ||||| Sbjct: 671 gtggcggccgcggcggcggtggaggcag 698
>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13 Length = 346186 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 gcggtggtggcagcgctggcggcg 279 ||||||||||| |||||||||||| Sbjct: 165442 gcggtggtggcggcgctggcggcg 165419
>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 8/14 Length = 306050 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 gcggtggtggcagcgctggcggcg 279 ||||||||||| |||||||||||| Sbjct: 18061 gcggtggtggcggcgctggcggcg 18038
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 cgcgtcgtcccgcccgcgca 80 |||||||||||||||||||| Sbjct: 215576 cgcgtcgtcccgcccgcgca 215595
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 gagcgtggtggccgcggcggcggt 260 ||||||||||||||||| |||||| Sbjct: 289687 gagcgtggtggccgcggtggcggt 289710
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29 Length = 248550 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggtggccgcggcggcggtggtggc 266 ||||||||||| |||||||||||| Sbjct: 174484 ggtggccgcggaggcggtggtggc 174507
>emb|AL606521.24| Mouse DNA sequence from clone RP23-280J3 on chromosome 11 Contains the 5' end of the Mtmr3 gene for myotubularin related protein 3, two novel genes, the gene for a novel protein similar to human ASC-1 complex subunit P100, the gene for a novel protein similar to human ubiquinol-cytochrome C reductase complex 7.2 kDa protein UQCR10, the Cabp7 gene for calcium binding protein 7, the 3' end of the Nf2 gene for neurofibromatosis 2 and two CpG islands, complete sequence Length = 233997 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 243 ggtggccgcggcggcggtggtggcagcg 270 |||||| ||||||||||||| ||||||| Sbjct: 164879 ggtggcggcggcggcggtggcggcagcg 164852
>emb|AJ223581.1|BRF223581 Branchiostoma floridae mRNA for intermediate filament protein D1 Length = 2742 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggtggccgcggcggcggtggtggc 266 |||||| ||||||||||||||||| Sbjct: 262 ggtggcggcggcggcggtggtggc 285
>gb|AC120387.5| Mus musculus chromosome 8, clone RP24-299O22, complete sequence Length = 163623 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 ccgagaggcccaacaagcag 184 |||||||||||||||||||| Sbjct: 30652 ccgagaggcccaacaagcag 30633
>emb|AL732631.4| Mouse DNA sequence from clone RP23-345P19 on chromosome 11 no genes, complete sequence Length = 191363 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 ccgagaggcccaacaagcag 184 |||||||||||||||||||| Sbjct: 119756 ccgagaggcccaacaagcag 119737
>emb|BX005437.5| Zebrafish DNA sequence from clone CH211-158M21 in linkage group 7, complete sequence Length = 180673 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 cactgctacccactgtgtct 126 |||||||||||||||||||| Sbjct: 55235 cactgctacccactgtgtct 55254
>emb|BX547933.13| Zebrafish DNA sequence from clone DKEY-87L9 in linkage group 2, complete sequence Length = 177199 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 cactgctacccactgtgtct 126 |||||||||||||||||||| Sbjct: 40769 cactgctacccactgtgtct 40750
>gb|AC010059.6| Drosophila melanogaster 3L BAC RP98-17A14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 171678 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 241 gtggtggccgcggcggcggtggtggcagcgctggcg 276 ||||||| ||||||||||||||| ||||| ||||| Sbjct: 41604 gtggtggaggcggcggcggtggtgccagcggtggcg 41569
>gb|AC098801.2| Drosophila melanogaster 3L BAC RP98-12G7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 178563 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 tggtggccgcggcggcggtggtgg 265 ||||||| |||||||||||||||| Sbjct: 146997 tggtggcggcggcggcggtggtgg 147020
>gb|AC091207.3| Drosophila melanogaster 3L BAC RP98-12P14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160504 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 tggtggccgcggcggcggtggtgg 265 ||||||| |||||||||||||||| Sbjct: 53099 tggtggcggcggcggcggtggtgg 53122
>gb|AC104507.5| Drosophila melanogaster 3L BAC RP98-26J11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 183911 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 241 gtggtggccgcggcggcggtggtggcagcgctggcg 276 ||||||| ||||||||||||||| ||||| ||||| Sbjct: 64704 gtggtggaggcggcggcggtggtgccagcggtggcg 64739
>emb|CR626560.1| full-length cDNA clone CS0DG001YC07 of B cells (Ramos cell line) of Homo sapiens (human) Length = 733 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 154 gcggcggtggtggtggcagcggtggcgg 181
>emb|CR626461.1| full-length cDNA clone CS0DC024YD16 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 951 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 372 gcggcggtggtggtggcagcggtggcgg 399
>emb|CR625534.1| full-length cDNA clone CS0DF038YF22 of Fetal brain of Homo sapiens (human) Length = 1706 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 1178 gcggcggtggtggtggcagcggtggcgg 1205
>emb|CR623780.1| full-length cDNA clone CS0DC003YF16 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1434 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 998 gcggcggtggtggtggcagcggtggcgg 1025
>emb|CR622300.1| full-length cDNA clone CS0DC003YJ22 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1433 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 998 gcggcggtggtggtggcagcggtggcgg 1025
>emb|CR620280.1| full-length cDNA clone CS0DL002YO08 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1547 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 997 gcggcggtggtggtggcagcggtggcgg 1024
>emb|CR617105.1| full-length cDNA clone CS0DI075YL22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1501 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 951 gcggcggtggtggtggcagcggtggcgg 978
>emb|CR615528.1| full-length cDNA clone CS0DI063YA17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1516 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 962 gcggcggtggtggtggcagcggtggcgg 989
>emb|CR615132.1| full-length cDNA clone CS0DI081YO16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1553 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 999 gcggcggtggtggtggcagcggtggcgg 1026
>emb|CR614904.1| full-length cDNA clone CS0DF007YF13 of Fetal brain of Homo sapiens (human) Length = 1574 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 1025 gcggcggtggtggtggcagcggtggcgg 1052
>emb|CR613686.1| full-length cDNA clone CS0DK010YB22 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1667 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 1136 gcggcggtggtggtggcagcggtggcgg 1163
>emb|CR613485.1| full-length cDNA clone CS0DK005YP23 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1791 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 1243 gcggcggtggtggtggcagcggtggcgg 1270
>emb|CR609461.1| full-length cDNA clone CS0DK006YE09 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1713 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 1184 gcggcggtggtggtggcagcggtggcgg 1211
>emb|CR612346.1| full-length cDNA clone CS0DA008YF04 of Neuroblastoma of Homo sapiens (human) Length = 1694 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 1145 gcggcggtggtggtggcagcggtggcgg 1172
>emb|CR611602.1| full-length cDNA clone CS0DC018YL07 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1341 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 791 gcggcggtggtggtggcagcggtggcgg 818
>emb|CR606402.1| full-length cDNA clone CS0DI064YN17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1501 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 952 gcggcggtggtggtggcagcggtggcgg 979
>emb|CR604151.1| full-length cDNA clone CS0DI007YH05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1744 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 1215 gcggcggtggtggtggcagcggtggcgg 1242
>emb|CR603257.1| full-length cDNA clone CS0DB001YP12 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1694 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 1147 gcggcggtggtggtggcagcggtggcgg 1174
>emb|CR600862.1| full-length cDNA clone CS0DI064YP08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1479 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 959 gcggcggtggtggtggcagcggtggcgg 986
>emb|CR599587.1| full-length cDNA clone CS0DI033YM20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1495 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 950 gcggcggtggtggtggcagcggtggcgg 977
>emb|CR599150.1| full-length cDNA clone CS0DA010YJ20 of Neuroblastoma of Homo sapiens (human) Length = 1769 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 1209 gcggcggtggtggtggcagcggtggcgg 1236
>emb|CR597090.1| full-length cDNA clone CS0DK010YO17 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1548 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 999 gcggcggtggtggtggcagcggtggcgg 1026
>emb|CR596751.1| full-length cDNA clone CS0DC028YL10 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1593 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 1058 gcggcggtggtggtggcagcggtggcgg 1085
>emb|CR596021.1| full-length cDNA clone CS0DI057YH17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1533 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 969 gcggcggtggtggtggcagcggtggcgg 996
>gb|AE011734.1| Xanthomonas axonopodis pv. citri str. 306, section 112 of 469 of the complete genome Length = 10516 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 ggcggcggtggtggcagcgc 271 |||||||||||||||||||| Sbjct: 5778 ggcggcggtggtggcagcgc 5759
>emb|CR595464.1| full-length cDNA clone CS0DM001YD17 of Fetal liver of Homo sapiens (human) Length = 1577 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcgg 277 ||||||| ||||||||||||| |||||| Sbjct: 1045 gcggcggtggtggtggcagcggtggcgg 1072
>gb|BC068149.1| Mus musculus PTC7 protein phosphatase homolog (S. cerevisiae), mRNA (cDNA clone MGC:93006 IMAGE:30537082), complete cds Length = 4636 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagc 269 |||||||||||||||||||| Sbjct: 360 gcggcggcggtggtggcagc 379
>ref|NM_177242.3| Mus musculus PTC7 protein phosphatase homolog (S. cerevisiae) (Pptc7), mRNA Length = 4636 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagc 269 |||||||||||||||||||| Sbjct: 360 gcggcggcggtggtggcagc 379
>gb|DP000063.1| Oryctolagus cuniculus target 117 genomic scaffold Length = 489372 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ggcggcggtggtggcagcgc 271 |||||||||||||||||||| Sbjct: 119655 ggcggcggtggtggcagcgc 119674
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 254 cggcggtggtggcagcgctggcgg 277 ||||||||||||| |||||||||| Sbjct: 784551 cggcggtggtggcggcgctggcgg 784528
>ref|NM_168755.1| Drosophila melanogaster Ecdysone-induced protein 75B CG8127-RB, transcript variant B (Eip75B), mRNA Length = 4536 Score = 40.1 bits (20), Expect = 4.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 241 gtggtggccgcggcggcggtggtggcagcgctggcg 276 ||||||| ||||||||||||||| ||||| ||||| Sbjct: 840 gtggtggaggcggcggcggtggtgccagcggtggcg 805
>ref|NM_168113.2| Drosophila melanogaster CG32423-RD, transcript variant D (CG32423), mRNA Length = 4591 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 tggtggccgcggcggcggtggtgg 265 ||||||| |||||||||||||||| Sbjct: 1557 tggtggcggcggcggcggtggtgg 1534
>gb|AC007550.70| Mus musculus strain 129S6/SvEvTac chromosome 11a2 clone rp21-434h10, complete sequence Length = 199956 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 243 ggtggccgcggcggcggtggtggcagcg 270 |||||| ||||||||||||| ||||||| Sbjct: 134556 ggtggcggcggcggcggtggcggcagcg 134583
>gb|AF020526.1| Mus musculus Pro-rich, PH and SH2 domain-containing signaling mediator beta (Psmbeta) mRNA, complete cds Length = 3064 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggtggtggcagcgctggcgg 277 |||||||||||||||||||| Sbjct: 351 ggtggtggcagcgctggcgg 332
>gb|AY013338.1| Drosophila kanekoi no-on transient A (nonA) gene, partial cds Length = 450 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 242 tggtggccgcggcggcggtggtgg 265 ||||||| |||||||||||||||| Sbjct: 217 tggtggcggcggcggcggtggtgg 240
>gb|AY013325.1| Drosophila virilis strain SKT no-on transient A (nonA) gene, partial cds Length = 424 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcggcgtt 281 ||||||||||||||||| ||| ||||||||| Sbjct: 222 gcggcggcggtggtggcggcggcggcggcgtt 253
>gb|AY013323.1| Drosophila virilis strain B42 no-on transient A (nonA) gene, partial cds Length = 424 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcggcgtt 281 ||||||||||||||||| ||| ||||||||| Sbjct: 222 gcggcggcggtggtggcggcggcggcggcgtt 253
>gb|AY013322.1| Drosophila virilis strain B31 no-on transient A (nonA) gene, partial cds Length = 422 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcggcgtt 281 ||||||||||||||||| ||| ||||||||| Sbjct: 222 gcggcggcggtggtggcggcggcggcggcgtt 253
>gb|AY013321.1| Drosophila virilis strain B22 no-on transient A (nonA) gene, partial cds Length = 424 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcggcgtt 281 ||||||||||||||||| ||| ||||||||| Sbjct: 222 gcggcggcggtggtggcggcggcggcggcgtt 253
>gb|AY013320.1| Drosophila virilis strain B15 no-on transient A (nonA) gene, partial cds Length = 424 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcggcgtt 281 ||||||||||||||||| ||| ||||||||| Sbjct: 222 gcggcggcggtggtggcggcggcggcggcgtt 253
>gb|AY013318.1| Drosophila virilis strain A13 no-on transient A (nonA) gene, partial cds Length = 424 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 250 gcggcggcggtggtggcagcgctggcggcgtt 281 ||||||||||||||||| ||| ||||||||| Sbjct: 222 gcggcggcggtggtggcggcggcggcggcgtt 253
>dbj|AK148085.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370013B05 product:SH2-B PH domain containing signaling mediator 1, full insert sequence Length = 3096 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggtggtggcagcgctggcgg 277 |||||||||||||||||||| Sbjct: 384 ggtggtggcagcgctggcgg 365
>dbj|AK154655.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630102G11 product:SH2-B PH domain containing signaling mediator 1, full insert sequence Length = 3300 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ggtggtggcagcgctggcgg 277 |||||||||||||||||||| Sbjct: 591 ggtggtggcagcgctggcgg 572
>ref|XM_935709.1| PREDICTED: Homo sapiens similar to Rap guanine nucleotide exchange factor 5 (Guanine nucleotide exchange factor for Rap1) (M-Ras-regulated Rap GEF) (MR-GEF) (LOC641947), mRNA Length = 2788 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 gccgcggcggcggtggtggc 266 |||||||||||||||||||| Sbjct: 139 gccgcggcggcggtggtggc 158
>ref|XM_937498.1| PREDICTED: Homo sapiens similar to Rap guanine nucleotide exchange factor 5 (Guanine nucleotide exchange factor for Rap1) (M-Ras-regulated Rap GEF) (MR-GEF) (LOC648450), mRNA Length = 2788 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 gccgcggcggcggtggtggc 266 |||||||||||||||||||| Sbjct: 139 gccgcggcggcggtggtggc 158
>ref|XM_929390.1| PREDICTED: Homo sapiens similar to Rap guanine nucleotide exchange factor 5 (Guanine nucleotide exchange factor for Rap1) (M-Ras-regulated Rap GEF) (MR-GEF) (LOC646468), mRNA Length = 2788 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 gccgcggcggcggtggtggc 266 |||||||||||||||||||| Sbjct: 139 gccgcggcggcggtggtggc 158
>gb|AF107890.1|AF107890 Homo sapiens mucin 5B (MUC5B) gene, partial cds Length = 22773 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 acccccaccgcaggcggagg 162 |||||||||||||||||||| Sbjct: 11062 acccccaccgcaggcggagg 11043 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,395,456 Number of Sequences: 3902068 Number of extensions: 2395456 Number of successful extensions: 70502 Number of sequences better than 10.0: 345 Number of HSP's better than 10.0 without gapping: 361 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 66337 Number of HSP's gapped (non-prelim): 4152 length of query: 361 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 339 effective length of database: 17,147,199,772 effective search space: 5812900722708 effective search space used: 5812900722708 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)