ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast46e08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 58 1e-08
2APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 55 1e-07
3FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 31 1.2
4LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglyc... 28 7.6
5EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 28 7.6
6ISL3_BRARE (P53407) Insulin gene enhancer protein isl-3 (Islet-3) 28 9.9
7SFAH_HELAN (P81098) Seed fatty acyl-ester hydrolase (EC 3.1.1.1)... 28 9.9

>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
 Frame = +3

Query: 267 VPAMFVFGDSLTDNGNNNDLTSLAKANYLPYGIDF-AGGPTGRFS 398
           +PA+F FGDS+ D GNNN+L +  K NY PYG+DF  G  TGRFS
Sbjct: 123 IPAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFS 167



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 26/45 (57%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
 Frame = +3

Query: 267 VPAMFVFGDSLTDNGNNNDLTSLAKANYLPYGIDFA-GGPTGRFS 398
           +PA+F FGDS+ D GNNN+L +  K+NY PYG+DF     TGRFS
Sbjct: 202 IPAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFS 246



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +3

Query: 270 PAMFVFGDSLTDNGNNNDLTSLAKANYLPYGIDFAGGPTGRF 395
           PA+F FGDS +D G    L++       P+G  F G P GR+
Sbjct: 29  PAIFNFGDSNSDTGG---LSAAFGQAGPPHGSSFFGSPAGRY 67



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>LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase)|
          Length = 645

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 276 MFVFGDSLTDNGNNNDLT 329
           ++VFGDSL+D GNN   T
Sbjct: 28  LYVFGDSLSDGGNNGRYT 45



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>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +3

Query: 270 PAMFVFGDSLTDNGNNNDLTSLAKANY---LPYGIDFAGGPTGRFS 398
           PA+F FGDS +D G        A A Y    PYG  F    TGR+S
Sbjct: 33  PAIFNFGDSNSDTGGK------AAAFYPLNPPYGETFFHRSTGRYS 72



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>ISL3_BRARE (P53407) Insulin gene enhancer protein isl-3 (Islet-3)|
          Length = 358

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = -2

Query: 436 QKLSYGVDHGVAVEKRPVGPP-AKSMP*GR*LALASDVRSLLLPLSVRESPNTN 278
           ++L    DHG+A+E+ P G P +      R L +A+D      P+SVR++P+ N
Sbjct: 135 EELLCRADHGLALERGPGGSPLSPGNIHTRGLHMAAD------PVSVRQTPHRN 182



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>SFAH_HELAN (P81098) Seed fatty acyl-ester hydrolase (EC 3.1.1.1) (Fragment)|
          Length = 18

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +3

Query: 267 VPAMFVFGDSLTDNG 311
           VP  F+FGDSL DNG
Sbjct: 4   VPXYFIFGDSLYDNG 18


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,225,425
Number of Sequences: 219361
Number of extensions: 559103
Number of successful extensions: 1506
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1505
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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