ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast46e05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479931.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1236 Score = 416 bits (210), Expect = e-113 Identities = 339/382 (88%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 ||||||||||||||||||||| || ||| |||||||| || ||||||||||||||||||| Sbjct: 581 acaagggtactgtggaaattatcacccctgtggagctcattaagaagggtgacaaggtgg 640 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatggactgg 125 ||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 641 gctcctccgagtctgctctgcttgccaagcttggtatccgccccttctcatatgggctgg 700 Query: 126 tcatctgcaatgtctatgacagtgggtcagtcttcagccccgaggttcttgacctcactg 185 | || ||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 701 ttattaccaatgtctatgacagtgggtcagtcttcagccctgaggtgcttgacctcactg 760 Query: 186 aggaagatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctgg 245 |||| || |||||||| |||||||||||||||||||| |||||||||||| | ||||||| Sbjct: 761 aggatgacctgatggagaagtttgcttctggtgtttctatggttgcctcagtctccctgg 820 Query: 246 cgatctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatg 305 | ||||| ||||| || || ||||||||||| |||||||||||||||| |||||||||| Sbjct: 821 caatctcgtacccaactattgctgctgcaccacacatgttcctcaatgggtacaagaatg 880 Query: 306 ttcttgcggtcgctttggagacagactactcgtatgaccatgctgataagatcaaggagt 365 | ||||| || ||| ||||||| || |||||||| |||||||||||||||||||||| Sbjct: 881 tgcttgctgttgctgtggagaccgaatactcgtacccacatgctgataagatcaaggagt 940 Query: 366 acctcaaggacccgagcaagtt 387 | | || ||||| |||||||| Sbjct: 941 atttgaaagaccccagcaagtt 962
>dbj|D21130.1|RICYK704 Oryza sativa (japonica cultivar-group) YK704 mRNA for acidic ribosomal protein P0, complete cds Length = 1220 Score = 416 bits (210), Expect = e-113 Identities = 339/382 (88%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 ||||||||||||||||||||| || ||| |||||||| || ||||||||||||||||||| Sbjct: 563 acaagggtactgtggaaattatcacccctgtggagctcattaagaagggtgacaaggtgg 622 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatggactgg 125 ||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 623 gctcctccgagtctgctctgcttgccaagcttggtatccgccccttctcatatgggctgg 682 Query: 126 tcatctgcaatgtctatgacagtgggtcagtcttcagccccgaggttcttgacctcactg 185 | || ||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 683 ttattaccaatgtctatgacagtgggtcagtcttcagccctgaggtgcttgacctcactg 742 Query: 186 aggaagatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctgg 245 |||| || |||||||| |||||||||||||||||||| |||||||||||| | ||||||| Sbjct: 743 aggatgacctgatggagaagtttgcttctggtgtttctatggttgcctcagtctccctgg 802 Query: 246 cgatctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatg 305 | ||||| ||||| || || ||||||||||| |||||||||||||||| |||||||||| Sbjct: 803 caatctcgtacccaactattgctgctgcaccacacatgttcctcaatgggtacaagaatg 862 Query: 306 ttcttgcggtcgctttggagacagactactcgtatgaccatgctgataagatcaaggagt 365 | ||||| || ||| ||||||| || |||||||| |||||||||||||||||||||| Sbjct: 863 tgcttgctgttgctgtggagaccgaatactcgtacccacatgctgataagatcaaggagt 922 Query: 366 acctcaaggacccgagcaagtt 387 | | || ||||| |||||||| Sbjct: 923 atttgaaagaccccagcaagtt 944
>dbj|AK064857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H12, full insert sequence Length = 1236 Score = 416 bits (210), Expect = e-113 Identities = 339/382 (88%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 ||||||||||||||||||||| || ||| |||||||| || ||||||||||||||||||| Sbjct: 581 acaagggtactgtggaaattatcacccctgtggagctcattaagaagggtgacaaggtgg 640 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatggactgg 125 ||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 641 gctcctccgagtctgctctgcttgccaagcttggtatccgccccttctcatatgggctgg 700 Query: 126 tcatctgcaatgtctatgacagtgggtcagtcttcagccccgaggttcttgacctcactg 185 | || ||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 701 ttattaccaatgtctatgacagtgggtcagtcttcagccctgaggtgcttgacctcactg 760 Query: 186 aggaagatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctgg 245 |||| || |||||||| |||||||||||||||||||| |||||||||||| | ||||||| Sbjct: 761 aggatgacctgatggagaagtttgcttctggtgtttctatggttgcctcagtctccctgg 820 Query: 246 cgatctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatg 305 | ||||| ||||| || || ||||||||||| |||||||||||||||| |||||||||| Sbjct: 821 caatctcgtacccaactattgctgctgcaccacacatgttcctcaatgggtacaagaatg 880 Query: 306 ttcttgcggtcgctttggagacagactactcgtatgaccatgctgataagatcaaggagt 365 | ||||| || ||| ||||||| || |||||||| |||||||||||||||||||||| Sbjct: 881 tgcttgctgttgctgtggagaccgaatactcgtacccacatgctgataagatcaaggagt 940 Query: 366 acctcaaggacccgagcaagtt 387 | | || ||||| |||||||| Sbjct: 941 atttgaaagaccccagcaagtt 962
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 414 bits (209), Expect = e-112 Identities = 323/361 (89%) Strand = Plus / Minus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 ||||||||||||||||||||| || ||| |||||||| || ||||||||||||||||||| Sbjct: 1715162 acaagggtactgtggaaattatcacccctgtggagctcattaagaagggtgacaaggtgg 1715103 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatggactgg 125 ||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1715102 gctcctccgagtctgctctgcttgccaagcttggtatccgccccttctcatatgggctgg 1715043 Query: 126 tcatctgcaatgtctatgacagtgggtcagtcttcagccccgaggttcttgacctcactg 185 | || ||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 1715042 ttattaccaatgtctatgacagtgggtcagtcttcagccctgaggtgcttgacctcactg 1714983 Query: 186 aggaagatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctgg 245 |||| || |||||||| |||||||||||||||||||| |||||||||||| | ||||||| Sbjct: 1714982 aggatgacctgatggagaagtttgcttctggtgtttctatggttgcctcagtctccctgg 1714923 Query: 246 cgatctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatg 305 | ||||| ||||| || || ||||||||||| |||||||||||||||| |||||||||| Sbjct: 1714922 caatctcgtacccaactattgctgctgcaccacacatgttcctcaatgggtacaagaatg 1714863 Query: 306 ttcttgcggtcgctttggagacagactactcgtatgaccatgctgataagatcaaggagt 365 | ||||| || ||| ||||||| || |||||||| |||||||||||||||||||||| Sbjct: 1714862 tgcttgctgttgctgtggagaccgaatactcgtacccacatgctgataagatcaaggagt 1714803 Query: 366 a 366 | Sbjct: 1714802 a 1714802
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0582D05 Length = 150483 Score = 414 bits (209), Expect = e-112 Identities = 323/361 (89%) Strand = Plus / Minus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 ||||||||||||||||||||| || ||| |||||||| || ||||||||||||||||||| Sbjct: 114662 acaagggtactgtggaaattatcacccctgtggagctcattaagaagggtgacaaggtgg 114603 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatggactgg 125 ||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 114602 gctcctccgagtctgctctgcttgccaagcttggtatccgccccttctcatatgggctgg 114543 Query: 126 tcatctgcaatgtctatgacagtgggtcagtcttcagccccgaggttcttgacctcactg 185 | || ||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 114542 ttattaccaatgtctatgacagtgggtcagtcttcagccctgaggtgcttgacctcactg 114483 Query: 186 aggaagatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctgg 245 |||| || |||||||| |||||||||||||||||||| |||||||||||| | ||||||| Sbjct: 114482 aggatgacctgatggagaagtttgcttctggtgtttctatggttgcctcagtctccctgg 114423 Query: 246 cgatctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatg 305 | ||||| ||||| || || ||||||||||| |||||||||||||||| |||||||||| Sbjct: 114422 caatctcgtacccaactattgctgctgcaccacacatgttcctcaatgggtacaagaatg 114363 Query: 306 ttcttgcggtcgctttggagacagactactcgtatgaccatgctgataagatcaaggagt 365 | ||||| || ||| ||||||| || |||||||| |||||||||||||||||||||| Sbjct: 114362 tgcttgctgttgctgtggagaccgaatactcgtacccacatgctgataagatcaaggagt 114303 Query: 366 a 366 | Sbjct: 114302 a 114302
>gb|AC123528.2| Oryza sativa chromosome 11 clone OSJNBa0078E03, complete sequence Length = 149493 Score = 383 bits (193), Expect = e-103 Identities = 319/361 (88%) Strand = Plus / Minus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 |||||||||| |||||||||| || ||| |||||||| || ||||||||||||||||| | Sbjct: 4540 acaagggtaccgtggaaattatcacccctgtggagctcattaagaagggtgacaaggttg 4481 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatggactgg 125 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4480 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatgggctgg 4421 Query: 126 tcatctgcaatgtctatgacagtgggtcagtcttcagccccgaggttcttgacctcactg 185 | ||| |||||| || ||||||||||||||||||||||| ||||| || |||||||||| Sbjct: 4420 tgatcaccaatgtgtacgacagtgggtcagtcttcagccctgaggtgctcgacctcactg 4361 Query: 186 aggaagatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctgg 245 | || || |||||||| |||||||| ||||||||||| |||||||||||| ||||||||| Sbjct: 4360 aagaggacctgatggagaagtttgcatctggtgtttcgatggttgcctcagtgtccctgg 4301 Query: 246 cgatctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatg 305 | ||||||||||| || || |||||||| || |||||||||||||||| |||||||||| Sbjct: 4300 caatctcatacccaactattgctgctgcgccacacatgttcctcaatgggtacaagaatg 4241 Query: 306 ttcttgcggtcgctttggagacagactactcgtatgaccatgctgataagatcaaggagt 365 | ||||| || ||| ||||||| || ||||| || |||||||||||||||||||||| Sbjct: 4240 tgcttgctgttgctgtggagaccgaatactcatacccacatgctgataagatcaaggagt 4181 Query: 366 a 366 | Sbjct: 4180 a 4180
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 383 bits (193), Expect = e-103 Identities = 319/361 (88%) Strand = Plus / Minus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 |||||||||| |||||||||| || ||| |||||||| || ||||||||||||||||| | Sbjct: 1648826 acaagggtaccgtggaaattatcacccctgtggagctcattaagaagggtgacaaggttg 1648767 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatggactgg 125 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1648766 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatgggctgg 1648707 Query: 126 tcatctgcaatgtctatgacagtgggtcagtcttcagccccgaggttcttgacctcactg 185 | ||| |||||| || ||||||||||||||||||||||| ||||| || |||||||||| Sbjct: 1648706 tgatcaccaatgtgtacgacagtgggtcagtcttcagccctgaggtgctcgacctcactg 1648647 Query: 186 aggaagatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctgg 245 | || || |||||||| |||||||| ||||||||||| |||||||||||| ||||||||| Sbjct: 1648646 aagaggacctgatggagaagtttgcatctggtgtttcgatggttgcctcagtgtccctgg 1648587 Query: 246 cgatctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatg 305 | ||||||||||| || || |||||||| || |||||||||||||||| |||||||||| Sbjct: 1648586 caatctcatacccaactattgctgctgcgccacacatgttcctcaatgggtacaagaatg 1648527 Query: 306 ttcttgcggtcgctttggagacagactactcgtatgaccatgctgataagatcaaggagt 365 | ||||| || ||| ||||||| || ||||| || |||||||||||||||||||||| Sbjct: 1648526 tgcttgctgttgctgtggagaccgaatactcatacccacatgctgataagatcaaggagt 1648467 Query: 366 a 366 | Sbjct: 1648466 a 1648466 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 tcaaggagtacctcaaggac 376 |||||||||||||||||||| Sbjct: 26815193 tcaaggagtacctcaaggac 26815212
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 383 bits (193), Expect = e-103 Identities = 319/361 (88%) Strand = Plus / Minus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 |||||||||| |||||||||| || ||| |||||||| || ||||||||||||||||| | Sbjct: 1646547 acaagggtaccgtggaaattatcacccctgtggagctcattaagaagggtgacaaggttg 1646488 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatggactgg 125 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1646487 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatgggctgg 1646428 Query: 126 tcatctgcaatgtctatgacagtgggtcagtcttcagccccgaggttcttgacctcactg 185 | ||| |||||| || ||||||||||||||||||||||| ||||| || |||||||||| Sbjct: 1646427 tgatcaccaatgtgtacgacagtgggtcagtcttcagccctgaggtgctcgacctcactg 1646368 Query: 186 aggaagatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctgg 245 | || || |||||||| |||||||| ||||||||||| |||||||||||| ||||||||| Sbjct: 1646367 aagaggacctgatggagaagtttgcatctggtgtttcgatggttgcctcagtgtccctgg 1646308 Query: 246 cgatctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatg 305 | ||||||||||| || || |||||||| || |||||||||||||||| |||||||||| Sbjct: 1646307 caatctcatacccaactattgctgctgcgccacacatgttcctcaatgggtacaagaatg 1646248 Query: 306 ttcttgcggtcgctttggagacagactactcgtatgaccatgctgataagatcaaggagt 365 | ||||| || ||| ||||||| || ||||| || |||||||||||||||||||||| Sbjct: 1646247 tgcttgctgttgctgtggagaccgaatactcatacccacatgctgataagatcaaggagt 1646188 Query: 366 a 366 | Sbjct: 1646187 a 1646187 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 tcaaggagtacctcaaggac 376 |||||||||||||||||||| Sbjct: 27142425 tcaaggagtacctcaaggac 27142444
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 359 bits (181), Expect = 5e-96 Identities = 316/361 (87%) Strand = Plus / Minus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 ||||||||||||||||||||| || ||| || ||||| || ||||||||||||||||| | Sbjct: 1602037 acaagggtactgtggaaattatcacccctgtagagctcattaagaagggtgacaaggttg 1601978 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatggactgg 125 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1601977 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatgggctgg 1601918 Query: 126 tcatctgcaatgtctatgacagtgggtcagtcttcagccccgaggttcttgacctcactg 185 | ||| |||||| || ||||||||||||||||||||||| ||||| || |||||||||| Sbjct: 1601917 tgatcaccaatgtgtacgacagtgggtcagtcttcagccctgaggtgctcgacctcactg 1601858 Query: 186 aggaagatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctgg 245 | || || |||||||| |||||||| ||||||||||| |||||||||||| ||||||||| Sbjct: 1601857 aagaggacctgatggagaagtttgcatctggtgtttcgatggttgcctcagtgtccctgg 1601798 Query: 246 cgatctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatg 305 | ||||||||||| || || || ||||| || |||||||||||||||| |||||||||| Sbjct: 1601797 caatctcatacccaactatcgcagctgcgccacacatgttcctcaatgggtacaagaatg 1601738 Query: 306 ttcttgcggtcgctttggagacagactactcgtatgaccatgctgataagatcaaggagt 365 | || || || ||| ||||||| || ||||| || |||||||| ||||||||||||| Sbjct: 1601737 tgctcgctgttgctgtggagaccgaatactcatacccacatgctgacaagatcaaggagt 1601678 Query: 366 a 366 | Sbjct: 1601677 a 1601677
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 359 bits (181), Expect = 5e-96 Identities = 316/361 (87%) Strand = Plus / Minus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 ||||||||||||||||||||| || ||| || ||||| || ||||||||||||||||| | Sbjct: 1602037 acaagggtactgtggaaattatcacccctgtagagctcattaagaagggtgacaaggttg 1601978 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatggactgg 125 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1601977 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatgggctgg 1601918 Query: 126 tcatctgcaatgtctatgacagtgggtcagtcttcagccccgaggttcttgacctcactg 185 | ||| |||||| || ||||||||||||||||||||||| ||||| || |||||||||| Sbjct: 1601917 tgatcaccaatgtgtacgacagtgggtcagtcttcagccctgaggtgctcgacctcactg 1601858 Query: 186 aggaagatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctgg 245 | || || |||||||| |||||||| ||||||||||| |||||||||||| ||||||||| Sbjct: 1601857 aagaggacctgatggagaagtttgcatctggtgtttcgatggttgcctcagtgtccctgg 1601798 Query: 246 cgatctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatg 305 | ||||||||||| || || || ||||| || |||||||||||||||| |||||||||| Sbjct: 1601797 caatctcatacccaactatcgcagctgcgccacacatgttcctcaatgggtacaagaatg 1601738 Query: 306 ttcttgcggtcgctttggagacagactactcgtatgaccatgctgataagatcaaggagt 365 | || || || ||| ||||||| || ||||| || |||||||| ||||||||||||| Sbjct: 1601737 tgctcgctgttgctgtggagaccgaatactcatacccacatgctgacaagatcaaggagt 1601678 Query: 366 a 366 | Sbjct: 1601677 a 1601677
>emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575_G05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 91883 Score = 359 bits (181), Expect = 5e-96 Identities = 316/361 (87%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 ||||||||||||||||||||| || ||| || ||||| || ||||||||||||||||| | Sbjct: 90885 acaagggtactgtggaaattatcacccctgtagagctcattaagaagggtgacaaggttg 90944 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatggactgg 125 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 90945 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatgggctgg 91004 Query: 126 tcatctgcaatgtctatgacagtgggtcagtcttcagccccgaggttcttgacctcactg 185 | ||| |||||| || ||||||||||||||||||||||| ||||| || |||||||||| Sbjct: 91005 tgatcaccaatgtgtacgacagtgggtcagtcttcagccctgaggtgctcgacctcactg 91064 Query: 186 aggaagatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctgg 245 | || || |||||||| |||||||| ||||||||||| |||||||||||| ||||||||| Sbjct: 91065 aagaggacctgatggagaagtttgcatctggtgtttcgatggttgcctcagtgtccctgg 91124 Query: 246 cgatctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatg 305 | ||||||||||| || || || ||||| || |||||||||||||||| |||||||||| Sbjct: 91125 caatctcatacccaactatcgcagctgcgccacacatgttcctcaatgggtacaagaatg 91184 Query: 306 ttcttgcggtcgctttggagacagactactcgtatgaccatgctgataagatcaaggagt 365 | || || || ||| ||||||| || ||||| || |||||||| ||||||||||||| Sbjct: 91185 tgctcgctgttgctgtggagaccgaatactcatacccacatgctgacaagatcaaggagt 91244 Query: 366 a 366 | Sbjct: 91245 a 91245
>emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa0009F13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183385 Score = 359 bits (181), Expect = 5e-96 Identities = 316/361 (87%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 ||||||||||||||||||||| || ||| || ||||| || ||||||||||||||||| | Sbjct: 23695 acaagggtactgtggaaattatcacccctgtagagctcattaagaagggtgacaaggttg 23754 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatggactgg 125 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 23755 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatgggctgg 23814 Query: 126 tcatctgcaatgtctatgacagtgggtcagtcttcagccccgaggttcttgacctcactg 185 | ||| |||||| || ||||||||||||||||||||||| ||||| || |||||||||| Sbjct: 23815 tgatcaccaatgtgtacgacagtgggtcagtcttcagccctgaggtgctcgacctcactg 23874 Query: 186 aggaagatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctgg 245 | || || |||||||| |||||||| ||||||||||| |||||||||||| ||||||||| Sbjct: 23875 aagaggacctgatggagaagtttgcatctggtgtttcgatggttgcctcagtgtccctgg 23934 Query: 246 cgatctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatg 305 | ||||||||||| || || || ||||| || |||||||||||||||| |||||||||| Sbjct: 23935 caatctcatacccaactatcgcagctgcgccacacatgttcctcaatgggtacaagaatg 23994 Query: 306 ttcttgcggtcgctttggagacagactactcgtatgaccatgctgataagatcaaggagt 365 | || || || ||| ||||||| || ||||| || |||||||| ||||||||||||| Sbjct: 23995 tgctcgctgttgctgtggagaccgaatactcatacccacatgctgacaagatcaaggagt 24054 Query: 366 a 366 | Sbjct: 24055 a 24055
>emb|Y07959.1|ZMRPP0 Z.mays mRNA for acidic ribosomal protein P0 Length = 1253 Score = 182 bits (92), Expect = 6e-43 Identities = 203/240 (84%) Strand = Plus / Plus Query: 148 tgggtcagtcttcagccccgaggttcttgacctcactgaggaagatctgatggacaagtt 207 |||||| || |||||||| ||||| |||||||| | ||||| || ||||| || ||||| Sbjct: 726 tgggtccgtgttcagccctgaggtgcttgacctttccgaggaggacctgattgagaagtt 785 Query: 208 tgcttctggtgtttccatggttgcctcactgtccctggcgatctcataccccaccatggc 267 ||| ||||||| |||||||||||||| ||||| ||||||||||| ||||| ||| | || Sbjct: 786 tgccactggtgtctccatggttgcctccctgtcactggcgatctcgtacccgacccttgc 845 Query: 268 tgctgcaccgcacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagac 327 ||||| || ||||||||| |||||| ||||||||||| ||||| || ||| | ||||| Sbjct: 846 tgctgtgccccacatgttcatcaatgggtacaagaatgtgcttgctgttgctgtcgagac 905 Query: 328 agactactcgtatgaccatgctgataagatcaaggagtacctcaaggacccgagcaagtt 387 |||||||||||| |||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 906 agactactcgtacccacatgctgacaagatcaaggagtacctcaaggacccaagcaagtt 965 Score = 153 bits (77), Expect = 6e-34 Identities = 101/109 (92%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 |||||||||| |||||||||| || ||| ||||||||||||||||||||||| ||||||| Sbjct: 584 acaagggtaccgtggaaattatcacccctgtggagctgatcaagaagggtgaaaaggtgg 643 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctc 114 |||| ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 644 gctcgtctgagtctgccctgctcgccaagctgggtatccgccccttctc 692
>gb|BT016531.1| Zea mays clone Contig364 mRNA sequence Length = 1230 Score = 174 bits (88), Expect = 2e-40 Identities = 202/240 (84%) Strand = Plus / Plus Query: 148 tgggtcagtcttcagccccgaggttcttgacctcactgaggaagatctgatggacaagtt 207 |||||| || |||||||| ||||| || ||||| ||||||| || ||||| || ||||| Sbjct: 707 tgggtccgtgttcagccctgaggtgctcgacctttctgaggaggacctgattgagaagtt 766 Query: 208 tgcttctggtgtttccatggttgcctcactgtccctggcgatctcataccccaccatggc 267 ||| ||||||| |||||||||||||| ||||| ||||||||||| ||||| ||| | || Sbjct: 767 tgccactggtgtctccatggttgcctccctgtcactggcgatctcgtacccgacccttgc 826 Query: 268 tgctgcaccgcacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagac 327 ||||| || ||||||||| |||||| ||||||||||| ||||| || ||| | ||||| Sbjct: 827 tgctgtgccccacatgttcatcaatgggtacaagaatgtgcttgctgttgctgtcgagac 886 Query: 328 agactactcgtatgaccatgctgataagatcaaggagtacctcaaggacccgagcaagtt 387 ||||||||| || |||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 887 agactactcatacccacatgctgacaagatcaaggagtacctcaaggacccaagcaagtt 946 Score = 145 bits (73), Expect = 1e-31 Identities = 100/109 (91%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 |||||||||| |||||||||| || ||| ||||||||||||||||||||||| ||||||| Sbjct: 565 acaagggtaccgtggaaattatcacccctgtggagctgatcaagaagggtgaaaaggtgg 624 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctc 114 |||| || |||||||||||||| |||||||| ||||||||||||||||| Sbjct: 625 gctcgtccgagtctgccctgctcgccaagctgggtatccgccccttctc 673
>gb|BT018921.1| Zea mays clone Contig30.F mRNA sequence Length = 820 Score = 145 bits (73), Expect = 1e-31 Identities = 100/109 (91%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 ||||||||||||||||||||| || ||| ||||||||||||||||||||||| ||||||| Sbjct: 85 acaagggtactgtggaaattatcacccctgtggagctgatcaagaagggtgagaaggtgg 144 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctc 114 |||| || |||||||||||||| |||||||| || |||||||||||||| Sbjct: 145 gctcgtccgagtctgccctgctcgccaagctgggcatccgccccttctc 193 Score = 111 bits (56), Expect = 2e-21 Identities = 194/240 (80%) Strand = Plus / Plus Query: 148 tgggtcagtcttcagccccgaggttcttgacctcactgaggaagatctgatggacaagtt 207 |||||| || |||||||| ||||| |||||||| ||||||| || || || || ||||| Sbjct: 227 tgggtctgtgttcagccctgaggtgcttgacctttctgaggaggacctaatcgagaagtt 286 Query: 208 tgcttctggtgtttccatggttgcctcactgtccctggcgatctcataccccaccatggc 267 || ||||||| |||||||| || || || |||||||| | || ||||| ||| | || Sbjct: 287 cgccactggtgtctccatggtcgcttctctttccctggcattatcgtacccgacccttgc 346 Query: 268 tgctgcaccgcacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagac 327 ||||| || |||||||| |||||| |||||||| || ||||| || ||| ||||||| Sbjct: 347 tgctgtgccccacatgtttatcaatgggtacaagaacgtgcttgctgttgctgtggagac 406 Query: 328 agactactcgtatgaccatgctgataagatcaaggagtacctcaaggacccgagcaagtt 387 ||||||||||| || || || ||||||||||||||||||||||||||||||||||| Sbjct: 407 ggactactcgtacccacacgccgacaagatcaaggagtacctcaaggacccgagcaagtt 466
>ref|XM_479932.1| Oryza sativa (japonica cultivar-group), mRNA Length = 451 Score = 141 bits (71), Expect = 2e-30 Identities = 149/175 (85%) Strand = Plus / Plus Query: 213 ctggtgtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctg 272 |||||||||| |||||||||||| | |||||||| ||||| ||||| || || ||||||| Sbjct: 1 ctggtgtttctatggttgcctcagtctccctggcaatctcgtacccaactattgctgctg 60 Query: 273 caccgcacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagacagact 332 |||| |||||||||||||||| ||||||||||| ||||| || ||| ||||||| || | Sbjct: 61 caccacacatgttcctcaatgggtacaagaatgtgcttgctgttgctgtggagaccgaat 120 Query: 333 actcgtatgaccatgctgataagatcaaggagtacctcaaggacccgagcaagtt 387 ||||||| ||||||||||||||||||||||| | || ||||| |||||||| Sbjct: 121 actcgtacccacatgctgataagatcaaggagtatttgaaagaccccagcaagtt 175
>dbj|AK062008.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-E02, full insert sequence Length = 451 Score = 141 bits (71), Expect = 2e-30 Identities = 149/175 (85%) Strand = Plus / Plus Query: 213 ctggtgtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctg 272 |||||||||| |||||||||||| | |||||||| ||||| ||||| || || ||||||| Sbjct: 1 ctggtgtttctatggttgcctcagtctccctggcaatctcgtacccaactattgctgctg 60 Query: 273 caccgcacatgttcctcaatgcatacaagaatgttcttgcggtcgctttggagacagact 332 |||| |||||||||||||||| ||||||||||| ||||| || ||| ||||||| || | Sbjct: 61 caccacacatgttcctcaatgggtacaagaatgtgcttgctgttgctgtggagaccgaat 120 Query: 333 actcgtatgaccatgctgataagatcaaggagtacctcaaggacccgagcaagtt 387 ||||||| ||||||||||||||||||||||| | || ||||| |||||||| Sbjct: 121 actcgtacccacatgctgataagatcaaggagtatttgaaagaccccagcaagtt 175
>ref|NM_111754.2| Arabidopsis thaliana structural constituent of ribosome AT3G09200 mRNA, complete cds Length = 1307 Score = 111 bits (56), Expect = 2e-21 Identities = 239/300 (79%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 |||||||||| || ||||| | || |||||| ||||| |||||| | ||||||||||| | Sbjct: 519 acaagggtaccgtcgaaatcatcaccccagttgagcttatcaagcaaggtgacaaggtcg 578 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatggactgg 125 | || |||||| |||| || || ||||||||||| ||| | || ||||||||||| || | Sbjct: 579 ggtcttctgaggctgcgcttctagccaagcttggcatcaggccgttctcatatggtcttg 638 Query: 126 tcatctgcaatgtctatgacagtgggtcagtcttcagccccgaggttcttgacctcactg 185 | || ||||||||||| ||| |||||||||||||| ||||||||||| || |||| Sbjct: 639 ttgtccagtctgtctatgacaatggctcagtcttcagcccagaggttcttgatcttactg 698 Query: 186 aggaagatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctgg 245 | || | || |||| ||||||||||||||| | |||||||| | || || | || | Sbjct: 699 aagaccaacttgtggagaagtttgcttctggtatctccatggtcacttccttggctcttg 758 Query: 246 cgatctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatg 305 | | || ||||| ||| | |||||||||||||| |||||| ||||||| |||||||||| Sbjct: 759 ctgtgtcgtaccctacccttgctgctgcaccgcatatgttcatcaatgcgtacaagaatg 818
>gb|AC011436.7|ATAC011436 Arabidopsis thaliana chromosome III BAC F3L24 genomic sequence, complete sequence Length = 106688 Score = 111 bits (56), Expect = 2e-21 Identities = 239/300 (79%) Strand = Plus / Minus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 |||||||||| || ||||| | || |||||| ||||| |||||| | ||||||||||| | Sbjct: 20551 acaagggtaccgtcgaaatcatcaccccagttgagcttatcaagcaaggtgacaaggtcg 20492 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatggactgg 125 | || |||||| |||| || || ||||||||||| ||| | || ||||||||||| || | Sbjct: 20491 ggtcttctgaggctgcgcttctagccaagcttggcatcaggccgttctcatatggtcttg 20432 Query: 126 tcatctgcaatgtctatgacagtgggtcagtcttcagccccgaggttcttgacctcactg 185 | || ||||||||||| ||| |||||||||||||| ||||||||||| || |||| Sbjct: 20431 ttgtccagtctgtctatgacaatggctcagtcttcagcccagaggttcttgatcttactg 20372 Query: 186 aggaagatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctgg 245 | || | || |||| ||||||||||||||| | |||||||| | || || | || | Sbjct: 20371 aagaccaacttgtggagaagtttgcttctggtatctccatggtcacttccttggctcttg 20312 Query: 246 cgatctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatg 305 | | || ||||| ||| | |||||||||||||| |||||| ||||||| |||||||||| Sbjct: 20311 ctgtgtcgtaccctacccttgctgctgcaccgcatatgttcatcaatgcgtacaagaatg 20252
>gb|AC009326.8|ATAC009326 Arabidopsis thaliana chromosome III P1 MZB10 genomic sequence, complete sequence Length = 85561 Score = 111 bits (56), Expect = 2e-21 Identities = 239/300 (79%) Strand = Plus / Minus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 |||||||||| || ||||| | || |||||| ||||| |||||| | ||||||||||| | Sbjct: 84874 acaagggtaccgtcgaaatcatcaccccagttgagcttatcaagcaaggtgacaaggtcg 84815 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatggactgg 125 | || |||||| |||| || || ||||||||||| ||| | || ||||||||||| || | Sbjct: 84814 ggtcttctgaggctgcgcttctagccaagcttggcatcaggccgttctcatatggtcttg 84755 Query: 126 tcatctgcaatgtctatgacagtgggtcagtcttcagccccgaggttcttgacctcactg 185 | || ||||||||||| ||| |||||||||||||| ||||||||||| || |||| Sbjct: 84754 ttgtccagtctgtctatgacaatggctcagtcttcagcccagaggttcttgatcttactg 84695 Query: 186 aggaagatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctgg 245 | || | || |||| ||||||||||||||| | |||||||| | || || | || | Sbjct: 84694 aagaccaacttgtggagaagtttgcttctggtatctccatggtcacttccttggctcttg 84635 Query: 246 cgatctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatg 305 | | || ||||| ||| | |||||||||||||| |||||| ||||||| |||||||||| Sbjct: 84634 ctgtgtcgtaccctacccttgctgctgcaccgcatatgttcatcaatgcgtacaagaatg 84575
>gb|AY059117.1| Arabidopsis thaliana putative 60S acidic ribosomal protein P0 (At3g09200) mRNA, complete cds Length = 994 Score = 111 bits (56), Expect = 2e-21 Identities = 239/300 (79%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 |||||||||| || ||||| | || |||||| ||||| |||||| | ||||||||||| | Sbjct: 449 acaagggtaccgtcgaaatcatcaccccagttgagcttatcaagcaaggtgacaaggtcg 508 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatggactgg 125 | || |||||| |||| || || ||||||||||| ||| | || ||||||||||| || | Sbjct: 509 ggtcttctgaggctgcgcttctagccaagcttggcatcaggccgttctcatatggtcttg 568 Query: 126 tcatctgcaatgtctatgacagtgggtcagtcttcagccccgaggttcttgacctcactg 185 | || ||||||||||| ||| |||||||||||||| ||||||||||| || |||| Sbjct: 569 ttgtccagtctgtctatgacaatggctcagtcttcagcccagaggttcttgatcttactg 628 Query: 186 aggaagatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctgg 245 | || | || |||| ||||||||||||||| | |||||||| | || || | || | Sbjct: 629 aagaccaacttgtggagaagtttgcttctggtatctccatggtcacttccttggctcttg 688 Query: 246 cgatctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatg 305 | | || ||||| ||| | |||||||||||||| |||||| ||||||| |||||||||| Sbjct: 689 ctgtgtcgtaccctacccttgctgctgcaccgcatatgttcatcaatgcgtacaagaatg 748
>gb|AF370225.1| Arabidopsis thaliana putative 60S acidic ribosomal protein P0 (At3g09200) mRNA, complete cds Length = 1160 Score = 111 bits (56), Expect = 2e-21 Identities = 239/300 (79%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 |||||||||| || ||||| | || |||||| ||||| |||||| | ||||||||||| | Sbjct: 519 acaagggtaccgtcgaaatcatcaccccagttgagcttatcaagcaaggtgacaaggtcg 578 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatggactgg 125 | || |||||| |||| || || ||||||||||| ||| | || ||||||||||| || | Sbjct: 579 ggtcttctgaggctgcgcttctagccaagcttggcatcaggccgttctcatatggtcttg 638 Query: 126 tcatctgcaatgtctatgacagtgggtcagtcttcagccccgaggttcttgacctcactg 185 | || ||||||||||| ||| |||||||||||||| ||||||||||| || |||| Sbjct: 639 ttgtccagtctgtctatgacaatggctcagtcttcagcccagaggttcttgatcttactg 698 Query: 186 aggaagatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctgg 245 | || | || |||| ||||||||||||||| | |||||||| | || || | || | Sbjct: 699 aagaccaacttgtggagaagtttgcttctggtatctccatggtcacttccttggctcttg 758 Query: 246 cgatctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatg 305 | | || ||||| ||| | |||||||||||||| |||||| ||||||| |||||||||| Sbjct: 759 ctgtgtcgtaccctacccttgctgctgcaccgcatatgttcatcaatgcgtacaagaatg 818
>emb|BX823923.1|CNS0A6KD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZG11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1136 Score = 111 bits (56), Expect = 2e-21 Identities = 239/300 (79%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 |||||||||| || ||||| | || |||||| ||||| |||||| | ||||||||||| | Sbjct: 486 acaagggtaccgtcgaaatcatcaccccagttgagcttatcaagcaaggtgacaaggtcg 545 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatggactgg 125 | || |||||| |||| || || ||||||||||| ||| | || ||||||||||| || | Sbjct: 546 ggtcttctgaggctgcgcttctagccaagcttggcatcaggccgttctcatatggtcttg 605 Query: 126 tcatctgcaatgtctatgacagtgggtcagtcttcagccccgaggttcttgacctcactg 185 | || ||||||||||| ||| |||||||||||||| ||||||||||| || |||| Sbjct: 606 ttgtccagtctgtctatgacaatggctcagtcttcagcccagaggttcttgatcttactg 665 Query: 186 aggaagatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctgg 245 | || | || |||| ||||||||||||||| | |||||||| | || || | || | Sbjct: 666 aagaccaacttgtggagaagtttgcttctggtatctccatggtcacttccttggctcttg 725 Query: 246 cgatctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatg 305 | | || ||||| ||| | |||||||||||||| |||||| ||||||| |||||||||| Sbjct: 726 ctgtgtcgtaccctacccttgctgctgcaccgcatatgttcatcaatgcgtacaagaatg 785
>gb|AY086582.1| Arabidopsis thaliana clone 2595 mRNA, complete sequence Length = 1199 Score = 111 bits (56), Expect = 2e-21 Identities = 239/300 (79%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 |||||||||| || ||||| | || |||||| ||||| |||||| | ||||||||||| | Sbjct: 517 acaagggtaccgtcgaaatcatcaccccagttgagcttatcaagcaaggtgacaaggtcg 576 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatggactgg 125 | || |||||| |||| || || ||||||||||| ||| | || ||||||||||| || | Sbjct: 577 ggtcttctgaggctgcgcttctagccaagcttggcatcaggccgttctcatatggtcttg 636 Query: 126 tcatctgcaatgtctatgacagtgggtcagtcttcagccccgaggttcttgacctcactg 185 | || ||||||||||| ||| |||||||||||||| ||||||||||| || |||| Sbjct: 637 ttgtccagtctgtctatgacaatggctcagtcttcagcccagaggttcttgatcttactg 696 Query: 186 aggaagatctgatggacaagtttgcttctggtgtttccatggttgcctcactgtccctgg 245 | || | || |||| ||||||||||||||| | |||||||| | || || | || | Sbjct: 697 aagaccaacttgtggagaagtttgcttctggtatctccatggtcacttccttggctcttg 756 Query: 246 cgatctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatg 305 | | || ||||| ||| | |||||||||||||| |||||| ||||||| |||||||||| Sbjct: 757 ctgtgtcgtaccctacccttgctgctgcaccgcatatgttcatcaatgcgtacaagaatg 816
>gb|DQ235176.1| Solanum tuberosum clone 156H10 P0 ribosomal protein-like mRNA, complete cds Length = 1254 Score = 97.6 bits (49), Expect = 3e-17 Identities = 166/205 (80%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 ||||||||||||| ||||||| || || || || || ||||||||||||||||| || | Sbjct: 615 acaagggtactgttgaaattatcactcctgttgaactcatcaagaagggtgacaaagttg 674 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatggactgg 125 | |||||||| |||||||||||||||| ||||| || | || ||||||||||| || | Sbjct: 675 gttcctctgaagctgccctgcttgccaaacttggaattaggccattctcatatggtcttg 734 Query: 126 tcatctgcaatgtctatgacagtgggtcagtcttcagccccgaggttcttgacctcactg 185 | | | ||| || |||| ||| || ||||||||||| |||||||||||||| |||| Sbjct: 735 ttgttgtctctgtttacgacaatggatccgtcttcagccctgaggttcttgacctgactg 794 Query: 186 aggaagatctgatggacaagtttgc 210 |||| ||||| || || |||||||| Sbjct: 795 aggatgatctcattgagaagtttgc 819
>gb|DQ241840.1| Solanum tuberosum clone 181G12 P0 ribosomal protein-like mRNA, complete cds Length = 1253 Score = 97.6 bits (49), Expect = 3e-17 Identities = 166/205 (80%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 ||||||||||||| ||||||| || || || || || ||||||||||||||||| || | Sbjct: 593 acaagggtactgttgaaattatcactcctgttgaactcatcaagaagggtgacaaagttg 652 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatggactgg 125 | |||||||| |||||||||||||||| ||||| || | || ||||||||||| || | Sbjct: 653 gttcctctgaagctgccctgcttgccaaacttggaattaggccattctcatatggtcttg 712 Query: 126 tcatctgcaatgtctatgacagtgggtcagtcttcagccccgaggttcttgacctcactg 185 | | | ||| || |||| ||| || ||||||||||| |||||||||||||| |||| Sbjct: 713 ttgttgtctctgtttacgacaatggatccgtcttcagccctgaggttcttgacctgactg 772 Query: 186 aggaagatctgatggacaagtttgc 210 |||| ||||| || || |||||||| Sbjct: 773 aggatgatctcattgagaagtttgc 797
>emb|BX824039.1|CNS0A6RI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH17ZF06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1185 Score = 93.7 bits (47), Expect = 5e-16 Identities = 179/223 (80%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 |||||||||| || ||||| | || |||||| ||||| |||||| | ||||||||||| | Sbjct: 503 acaagggtaccgtcgaaatcatcaccccagttgagcttatcaagcaaggtgacaaggtcg 562 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatggactgg 125 | || |||||| |||| || || ||||||||||| ||| | || ||||||||||| || | Sbjct: 563 ggtcttctgaggctgcgcttctagccaagcttggcatcaggccgttctcatatggtcttg 622 Query: 126 tcatctgcaatgtctatgacagtgggtcagtcttcagccccgaggttcttgacctcactg 185 | || ||||||||| | ||| |||||||||||||| ||||||||||| || |||| Sbjct: 623 ttgtccagtctgtctatgaaaatggctcagtcttcagcccagaggttcttgatcttactg 682 Query: 186 aggaagatctgatggacaagtttgcttctggtgtttccatggt 228 | || | || |||| ||||||||||||||| | |||||||| Sbjct: 683 aagaccaacttgtggagaagtttgcttctggtatctccatggt 725 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 266 gctgctgcaccgcacatgttcctcaatgcatacaagaatg 305 |||||||||||||| |||||| ||||||| |||||||||| Sbjct: 763 gctgctgcaccgcatatgttcatcaatgcgtacaagaatg 802
>gb|L46848.1|SOYARPP Glycine max acidic ribosomal protein P0 mRNA, complete cds Length = 1247 Score = 89.7 bits (45), Expect = 7e-15 Identities = 132/161 (81%) Strand = Plus / Plus Query: 152 tcagtcttcagccccgaggttcttgacctcactgaggaagatctgatggacaagtttgct 211 ||||| |||||||| ||||||||||| || |||||||| ||||| || | ||||||||| Sbjct: 725 tcagtgttcagccctgaggttcttgatcttactgaggatgatctcattgggaagtttgct 784 Query: 212 tctggtgtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgct 271 ||||||| || |||||| | ||||| || |||| || ||||| || || | ||||| Sbjct: 785 gctggtgtctcaatggttacttcactttcattggctatttcatatccaacacttgctgca 844 Query: 272 gcaccgcacatgttcctcaatgcatacaagaatgttcttgc 312 ||||| |||||||| ||||||| ||||||||||||||||| Sbjct: 845 gcaccacacatgtttgtcaatgcctacaagaatgttcttgc 885
>dbj|AB091076.1| Zinnia elegans ZeRPP0 mRNA for putative 60S acidic ribosomal protein P0, partial cds Length = 820 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 ||||||||||||| ||||||| || |||||||||||| ||||||||||||||||| |||| Sbjct: 659 acaagggtactgttgaaattatcaccccagtggagcttatcaagaagggtgacaaagtgg 718 Query: 66 gctcctctgagtctgc 81 | || |||||| |||| Sbjct: 719 gttcatctgaggctgc 734
>emb|X93587.1|LLP0 L.luteus mRNA for P0 ribosomal protein Length = 1393 Score = 81.8 bits (41), Expect = 2e-12 Identities = 101/121 (83%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 ||||||||||||| ||||||| || || |||||||| || |||||||| |||||||| | Sbjct: 608 acaagggtactgttgaaattatcacacccgtggagctcattaagaagggagacaaggttg 667 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatggactgg 125 |||| ||||| |||| |||||||||||||||| || | || ||||||||||| |||| Sbjct: 668 gctcttctgaagctgcattgcttgccaagcttggcataaggccattctcatatggtctgg 727 Query: 126 t 126 | Sbjct: 728 t 728
>gb|AC130799.19| Medicago truncatula clone mth2-34b13, complete sequence Length = 133305 Score = 79.8 bits (40), Expect = 7e-12 Identities = 148/184 (80%) Strand = Plus / Minus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 ||||||||||||||||||| | | ||||||||| ||||| ||||| || |||||||| | Sbjct: 104209 acaagggtactgtggaaatcattaccccagtggaactgattaagaaaggagacaaggttg 104150 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatggactgg 125 | || ||||| |||| ||||||||||| | ||||| | ||||| |||||||| || | Sbjct: 104149 gatcttctgaagctgcattgcttgccaagttaggtattaggcccttttcatatgggcttg 104090 Query: 126 tcatctgcaatgtctatgacagtgggtcagtcttcagccccgaggttcttgacctcactg 185 | || ||| ||||||| ||| ||||| || ||||| ||||||||||||||||||| Sbjct: 104089 tggtcctttctgtttatgacaatggttcagtgtttagccctgaggttcttgacctcactg 104030 Query: 186 agga 189 |||| Sbjct: 104029 agga 104026
>ref|NM_111960.2| Arabidopsis thaliana structural constituent of ribosome AT3G11250 mRNA, complete cds Length = 1239 Score = 75.8 bits (38), Expect = 1e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 ||||||||||||| ||||||| || ||| |||||||| |||||| | ||||||||||| | Sbjct: 542 acaagggtactgttgaaattatcacccctgtggagcttatcaagcaaggtgacaaggttg 601 Query: 66 gctcctctgagtctgccctgcttgccaagcttgg 99 | || |||||| ||||||| || || |||||||| Sbjct: 602 ggtcttctgaggctgcccttctagctaagcttgg 635 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 269 gctgcaccgcacatgttcctcaatgcatacaagaatg 305 ||||||||||| |||||| ||||||| |||||||||| Sbjct: 805 gctgcaccgcatatgttcatcaatgcctacaagaatg 841
>gb|AY091201.1| Arabidopsis thaliana putative 60S acidic ribosomal protein (At3g11250) mRNA, complete cds Length = 1003 Score = 75.8 bits (38), Expect = 1e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 ||||||||||||| ||||||| || ||| |||||||| |||||| | ||||||||||| | Sbjct: 449 acaagggtactgttgaaattatcacccctgtggagcttatcaagcaaggtgacaaggttg 508 Query: 66 gctcctctgagtctgccctgcttgccaagcttgg 99 | || |||||| ||||||| || || |||||||| Sbjct: 509 ggtcttctgaggctgcccttctagctaagcttgg 542 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 269 gctgcaccgcacatgttcctcaatgcatacaagaatg 305 ||||||||||| |||||| ||||||| |||||||||| Sbjct: 712 gctgcaccgcatatgttcatcaatgcctacaagaatg 748
>gb|AY056150.1| Arabidopsis thaliana putative 60S acidic ribosomal protein (At3g11250) mRNA, complete cds Length = 1174 Score = 75.8 bits (38), Expect = 1e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 ||||||||||||| ||||||| || ||| |||||||| |||||| | ||||||||||| | Sbjct: 512 acaagggtactgttgaaattatcacccctgtggagcttatcaagcaaggtgacaaggttg 571 Query: 66 gctcctctgagtctgccctgcttgccaagcttgg 99 | || |||||| ||||||| || || |||||||| Sbjct: 572 ggtcttctgaggctgcccttctagctaagcttgg 605 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 269 gctgcaccgcacatgttcctcaatgcatacaagaatg 305 ||||||||||| |||||| ||||||| |||||||||| Sbjct: 775 gctgcaccgcatatgttcatcaatgcctacaagaatg 811
>gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11B9 genomic sequence, complete sequence Length = 103517 Score = 75.8 bits (38), Expect = 1e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 ||||||||||||| ||||||| || ||| |||||||| |||||| | ||||||||||| | Sbjct: 59370 acaagggtactgttgaaattatcacccctgtggagcttatcaagcaaggtgacaaggttg 59429 Query: 66 gctcctctgagtctgccctgcttgccaagcttgg 99 | || |||||| ||||||| || || |||||||| Sbjct: 59430 ggtcttctgaggctgcccttctagctaagcttgg 59463 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 269 gctgcaccgcacatgttcctcaatgcatacaagaatg 305 ||||||||||| |||||| ||||||| |||||||||| Sbjct: 59633 gctgcaccgcatatgttcatcaatgcctacaagaatg 59669
>gb|AY087728.1| Arabidopsis thaliana clone 38036 mRNA, complete sequence Length = 1185 Score = 75.8 bits (38), Expect = 1e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 ||||||||||||| ||||||| || ||| |||||||| |||||| | ||||||||||| | Sbjct: 489 acaagggtactgttgaaattatcacccctgtggagcttatcaagcaaggtgacaaggttg 548 Query: 66 gctcctctgagtctgccctgcttgccaagcttgg 99 | || |||||| ||||||| || || |||||||| Sbjct: 549 ggtcttctgaggctgcccttctagctaagcttgg 582 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 269 gctgcaccgcacatgttcctcaatgcatacaagaatg 305 ||||||||||| |||||| ||||||| |||||||||| Sbjct: 752 gctgcaccgcatatgttcatcaatgcctacaagaatg 788
>dbj|AB236824.1| Trifolium pratense RNA for putative 60S acidic ribosomal protein P0, complete cds, clone: C2319 Length = 1345 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 214 tggtgtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgc 273 ||||||||| |||||| | ||||| || |||| ||||| ||||| || | || ||||| Sbjct: 816 tggtgtttcaatggttacttcactttcgttggccatctcttacccaacacttgcagctgc 875 Query: 274 accgcacatgttcctcaatgcatacaagaatgttctt 310 ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 876 acctcacatgttcgtcaatgcctacaagaatgttctt 912 Score = 44.1 bits (22), Expect = 0.38 Identities = 49/58 (84%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggt 63 ||||||||||||||||||| | | ||| || || || ||||||||||| |||||||| Sbjct: 608 acaagggtactgtggaaatcattacccctgttgaactcatcaagaagggagacaaggt 665
>gb|AF227622.1|AF227622 Euphorbia esula 60S acidic ribosomal protein PO mRNA, partial cds Length = 1127 Score = 60.0 bits (30), Expect = 6e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 ||||||| || || ||||| | || ||| ||||| || ||||||||||| |||||||||| Sbjct: 443 acaagggaacagtcgaaatcatcacccctgtggaactaatcaagaagggagacaaggtgg 502 Query: 66 gctcctctgagtctgccctgct 87 ||||||| ||| ||||| |||| Sbjct: 503 gctcctccgaggctgccttgct 524 Score = 44.1 bits (22), Expect = 0.38 Identities = 49/58 (84%) Strand = Plus / Plus Query: 249 tctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgt 306 |||||||||| || | |||||||| || ||||||||| | ||||| ||||||||||| Sbjct: 686 tctcatacccaactctagctgctgccccccacatgttcattaatgcctacaagaatgt 743
>ref|NM_129559.2| Arabidopsis thaliana structural constituent of ribosome AT2G40010 mRNA, complete cds Length = 1153 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 248 atctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgtt 307 ||||| ||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||| Sbjct: 694 atctcttacccaaccgtagcagctgcgcctcacatgttcctcaatgcttacaagaacgtt 753 Query: 308 cttgc 312 ||||| Sbjct: 754 cttgc 758 Score = 44.1 bits (22), Expect = 0.38 Identities = 70/86 (81%) Strand = Plus / Plus Query: 35 gtggagctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaag 94 |||||||| |||||||| || ||||| || || || || ||| |||| || ||||||||| Sbjct: 481 gtggagctcatcaagaaaggcgacaaagtcggttcatccgaggctgcgcttcttgccaag 540 Query: 95 cttggtatccgccccttctcatatgg 120 ||||| ||| | ||||| || ||||| Sbjct: 541 cttggaatcaggcccttttcgtatgg 566
>gb|AY070448.1| Arabidopsis thaliana At2g40010 mRNA sequence Length = 1373 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 248 atctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgtt 307 ||||| ||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||| Sbjct: 898 atctcttacccaaccgtagcagctgcgcctcacatgttcctcaatgcttacaagaacgtt 957 Query: 308 cttgc 312 ||||| Sbjct: 958 cttgc 962 Score = 44.1 bits (22), Expect = 0.38 Identities = 70/86 (81%) Strand = Plus / Plus Query: 35 gtggagctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaag 94 |||||||| |||||||| || ||||| || || || || ||| |||| || ||||||||| Sbjct: 685 gtggagctcatcaagaaaggcgacaaagtcggttcatccgaggctgcgcttcttgccaag 744 Query: 95 cttggtatccgccccttctcatatgg 120 ||||| ||| | ||||| || ||||| Sbjct: 745 cttggaatcaggcccttttcgtatgg 770
>dbj|AB236811.1| Trifolium pratense RNA for putative 60S acidic ribosomal protein P0, complete cds, clone: C212 Length = 1326 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 214 tggtgtttccatggttgcctcactgtccctggcgatctcataccccaccatggctgctgc 273 ||||||||| |||||| | ||||| || |||| ||||| ||||| || | || ||||| Sbjct: 823 tggtgtttcaatggttacttcactttcgttggccatctcttacccaacacttgcagctgc 882 Query: 274 accgcacatgttcctcaatgcatacaagaatgttctt 310 ||| ||||||||| | ||||| ||||||||||||||| Sbjct: 883 acctcacatgttcgtgaatgcctacaagaatgttctt 919 Score = 44.1 bits (22), Expect = 0.38 Identities = 49/58 (84%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggt 63 ||||||||||||||||||| | | ||| || || || ||||||||||| |||||||| Sbjct: 615 acaagggtactgtggaaatcattacccctgttgaactcatcaagaagggagacaaggt 672
>gb|AF002109.3| Arabidopsis thaliana chromosome 2 clone T28M21 map CIC10A06, complete sequence Length = 108847 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 248 atctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgtt 307 ||||| ||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||| Sbjct: 77581 atctcttacccaaccgtagcagctgcgcctcacatgttcctcaatgcttacaagaacgtt 77522 Query: 308 cttgc 312 ||||| Sbjct: 77521 cttgc 77517 Score = 44.1 bits (22), Expect = 0.38 Identities = 70/86 (81%) Strand = Plus / Minus Query: 35 gtggagctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaag 94 |||||||| |||||||| || ||||| || || || || ||| |||| || ||||||||| Sbjct: 77794 gtggagctcatcaagaaaggcgacaaagtcggttcatccgaggctgcgcttcttgccaag 77735 Query: 95 cttggtatccgccccttctcatatgg 120 ||||| ||| | ||||| || ||||| Sbjct: 77734 cttggaatcaggcccttttcgtatgg 77709
>emb|BX816288.1|CNS0AE9F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH39ZH02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1296 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 248 atctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgtt 307 ||||| ||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||| Sbjct: 780 atctcttacccaaccgtagcagctgcgcctcacatgttcctcaatgcttacaagaacgtt 721 Query: 308 cttgc 312 ||||| Sbjct: 720 cttgc 716
>gb|BT001919.1| Arabidopsis thaliana clone C105444 putative 60S acidic ribosomal protein P0 (At2g40010) mRNA, complete cds Length = 985 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 248 atctcataccccaccatggctgctgcaccgcacatgttcctcaatgcatacaagaatgtt 307 ||||| ||||| ||| | || ||||| || ||||||||||||||||| |||||||| ||| Sbjct: 694 atctcttacccaaccgtagcagctgcgcctcacatgttcctcaatgcttacaagaacgtt 753 Query: 308 cttgc 312 ||||| Sbjct: 754 cttgc 758 Score = 44.1 bits (22), Expect = 0.38 Identities = 70/86 (81%) Strand = Plus / Plus Query: 35 gtggagctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaag 94 |||||||| |||||||| || ||||| || || || || ||| |||| || ||||||||| Sbjct: 481 gtggagctcatcaagaaaggcgacaaagtcggttcatccgaggctgcgcttcttgccaag 540 Query: 95 cttggtatccgccccttctcatatgg 120 ||||| ||| | ||||| || ||||| Sbjct: 541 cttggaatcaggcccttttcgtatgg 566
>emb|X15206.1|CRCRE2 C.rubrum mRNA for light-induced 34kD protein Length = 1332 Score = 54.0 bits (27), Expect = 4e-04 Identities = 93/115 (80%) Strand = Plus / Plus Query: 6 acaagggtactgtggaaattaccatcccagtggagctgatcaagaagggtgacaaggtgg 65 ||||||||||||| ||||||| || | || ||||| ||||||||||| || ||||||| Sbjct: 691 acaagggtactgtcgaaattatcactgctgtagagctcatcaagaagggcgaaaaggtgg 750 Query: 66 gctcctctgagtctgccctgcttgccaagcttggtatccgccccttctcatatgg 120 | || |||||| | || || ||||| |||||||| || | || ||||||||||| Sbjct: 751 gttcttctgaggcagctctacttgcaaagcttggaattaggcctttctcatatgg 805
>gb|DQ306774.1| Hevea brasiliensis isolate SSH45 mRNA sequence Length = 308 Score = 54.0 bits (27), Expect = 4e-04 Identities = 132/167 (79%) Strand = Plus / Plus Query: 140 tatgacagtgggtcagtcttcagccccgaggttcttgacctcactgaggaagatctgatg 199 ||||||| ||| || || |||||||| ||||| ||||| || ||||| || ||||| | Sbjct: 83 tatgacaatggctctgtattcagcccagaggtgcttgatctgactgaagatgatcttgtt 142 Query: 200 gacaagtttgcttctggtgtttccatggttgcctcactgtccctggcgatctcatacccc 259 || |||||||| ||||||| |||||||| | ||| | | |||| || |||||||| Sbjct: 143 gagaagtttgcaactggtgtctccatggtcacttcattagcattggccatatcataccca 202 Query: 260 accatggctgctgcaccgcacatgttcctcaatgcatacaagaatgt 306 || |||| |||||||| ||||||||| | ||||| ||||||||||| Sbjct: 203 actctggcagctgcaccacacatgttcgttaatgcctacaagaatgt 249
>gb|DQ306752.1| Hevea brasiliensis isolate SSH23 mRNA sequence Length = 308 Score = 54.0 bits (27), Expect = 4e-04 Identities = 132/167 (79%) Strand = Plus / Plus Query: 140 tatgacagtgggtcagtcttcagccccgaggttcttgacctcactgaggaagatctgatg 199 ||||||| ||| || || |||||||| ||||| ||||| || ||||| || ||||| | Sbjct: 83 tatgacaatggctctgtattcagcccagaggtgcttgatctgactgaagatgatcttgtt 142 Query: 200 gacaagtttgcttctggtgtttccatggttgcctcactgtccctggcgatctcatacccc 259 || |||||||| ||||||| |||||||| | ||| | | |||| || |||||||| Sbjct: 143 gagaagtttgcaactggtgtctccatggtcacttcattagcattggccatatcataccca 202 Query: 260 accatggctgctgcaccgcacatgttcctcaatgcatacaagaatgt 306 || |||| |||||||| ||||||||| | ||||| ||||||||||| Sbjct: 203 actctggcagctgcaccacacatgttcgttaatgcctacaagaatgt 249
>emb|BX819391.1|CNS0A9W8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB74ZC11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 961 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 279 acatgttcctcaatgcatacaagaatgttcttgc 312 |||||||||||||||| |||||||| |||||||| Sbjct: 581 acatgttcctcaatgcttacaagaacgttcttgc 614 Score = 44.1 bits (22), Expect = 0.38 Identities = 70/86 (81%) Strand = Plus / Plus Query: 35 gtggagctgatcaagaagggtgacaaggtgggctcctctgagtctgccctgcttgccaag 94 |||||||| |||||||| || ||||| || || || || ||| |||| || ||||||||| Sbjct: 337 gtggagctcatcaagaaaggcgacaaagtcggttcatccgaggctgcgcttcttgccaag 396 Query: 95 cttggtatccgccccttctcatatgg 120 ||||| ||| | ||||| || ||||| Sbjct: 397 cttggaatcaggcccttttcgtatgg 422
>gb|AC164402.3| Mus musculus chromosome 15, clone RP23-463G20, complete sequence Length = 196916 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Minus Query: 197 atggacaagtttgcttctggtgtttcca 224 ||||||||| |||||||||||||||||| Sbjct: 96023 atggacaagcttgcttctggtgtttcca 95996
>gb|AC010009.7| Drosophila melanogaster 3L BAC RP98-23D16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 195757 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 356 atcaaggagtacctcaaggacccgagcaagtt 387 |||||||||||| |||||||||| |||||||| Sbjct: 186098 atcaaggagtacatcaaggaccccagcaagtt 186067
>gb|AC010011.5| Drosophila melanogaster 3L BAC RP98-17D14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167026 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 356 atcaaggagtacctcaaggacccgagcaagtt 387 |||||||||||| |||||||||| |||||||| Sbjct: 140084 atcaaggagtacatcaaggaccccagcaagtt 140115
>ref|NM_079487.2| Drosophila melanogaster Ribosomal protein LP0 CG7490-RA (RpLP0), mRNA Length = 1262 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 356 atcaaggagtacctcaaggacccgagcaagtt 387 |||||||||||| |||||||||| |||||||| Sbjct: 928 atcaaggagtacatcaaggaccccagcaagtt 959
>gb|AY075528.1| Drosophila melanogaster RE74511 full length cDNA Length = 1277 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 356 atcaaggagtacctcaaggacccgagcaagtt 387 |||||||||||| |||||||||| |||||||| Sbjct: 928 atcaaggagtacatcaaggaccccagcaagtt 959
>gb|BT021447.1| Drosophila melanogaster GH01513 full insert cDNA Length = 1674 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 356 atcaaggagtacctcaaggacccgagcaagtt 387 |||||||||||| |||||||||| |||||||| Sbjct: 1314 atcaaggagtacatcaaggaccccagcaagtt 1345
>gb|AE003596.5| Drosophila melanogaster chromosome 3L, section 77 of 83 of the complete sequence Length = 249021 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 356 atcaaggagtacctcaaggacccgagcaagtt 387 |||||||||||| |||||||||| |||||||| Sbjct: 202451 atcaaggagtacatcaaggaccccagcaagtt 202482
>gb|AC106843.11| Mus musculus chromosome 15, clone RP24-151M4, complete sequence Length = 179117 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Plus Query: 197 atggacaagtttgcttctggtgtttcca 224 ||||||||| |||||||||||||||||| Sbjct: 142519 atggacaagcttgcttctggtgtttcca 142546
>gb|M25772.1|DROAP3A Drosophila melanogaster DNA repair protein (AP3) mRNA, complete cds Length = 1193 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 356 atcaaggagtacctcaaggacccgagcaagtt 387 |||||||||||| |||||||||| |||||||| Sbjct: 860 atcaaggagtacatcaaggaccccagcaagtt 891
>ref|XM_467718.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1727 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 358 caaggagtacctcaaggacccga 380 ||||||||||||||||||||||| Sbjct: 1128 caaggagtacctcaaggacccga 1150
>emb|BX071599.1|CNS09RER Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC9AG12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 322 Score = 46.1 bits (23), Expect = 0.096 Identities = 29/31 (93%) Strand = Plus / Minus Query: 357 tcaaggagtacctcaaggacccgagcaagtt 387 ||||||||| | ||||||||||||||||||| Sbjct: 131 tcaaggagttcatcaaggacccgagcaagtt 101
>emb|BX052086.1|CNS09CCQ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC3AB05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 956 Score = 46.1 bits (23), Expect = 0.096 Identities = 29/31 (93%) Strand = Plus / Minus Query: 357 tcaaggagtacctcaaggacccgagcaagtt 387 ||||||||| | ||||||||||||||||||| Sbjct: 433 tcaaggagttcatcaaggacccgagcaagtt 403
>emb|BX052085.1|CNS09CCP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC3AB05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1013 Score = 46.1 bits (23), Expect = 0.096 Identities = 29/31 (93%) Strand = Plus / Plus Query: 357 tcaaggagtacctcaaggacccgagcaagtt 387 ||||||||| | ||||||||||||||||||| Sbjct: 871 tcaaggagttcatcaaggacccgagcaagtt 901
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 358 caaggagtacctcaaggacccga 380 ||||||||||||||||||||||| Sbjct: 31019529 caaggagtacctcaaggacccga 31019551
>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516G10 Length = 148937 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 358 caaggagtacctcaaggacccga 380 ||||||||||||||||||||||| Sbjct: 74485 caaggagtacctcaaggacccga 74507
>dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585G03 Length = 173649 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 358 caaggagtacctcaaggacccga 380 ||||||||||||||||||||||| Sbjct: 8753 caaggagtacctcaaggacccga 8775
>dbj|AK071385.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092C13, full insert sequence Length = 1726 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 358 caaggagtacctcaaggacccga 380 ||||||||||||||||||||||| Sbjct: 1127 caaggagtacctcaaggacccga 1149
>tpe|BN000560.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx31 gene for class III peroxidase 31 precursor, exon 1 Length = 1353 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 358 caaggagtacctcaaggacccga 380 ||||||||||||||||||||||| Sbjct: 1050 caaggagtacctcaaggacccga 1072
>gb|L24094.1|GORADPRB Gorilla gorilla ADP-ribosyltransferase (NAD+) pseudogene, repeat region Length = 5787 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 246 cgatctcataccccaccatggct 268 ||||||||||||||||||||||| Sbjct: 3359 cgatctcataccccaccatggct 3337
>gb|AC133514.4| Mus musculus BAC clone RP23-212F6 from chromosome 5, complete sequence Length = 208083 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 278 cacatgttcctcaatgcataca 299 |||||||||||||||||||||| Sbjct: 71917 cacatgttcctcaatgcataca 71896
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 259 caccatggctgctgcaccgcac 280 |||||||||||||||||||||| Sbjct: 4483133 caccatggctgctgcaccgcac 4483112
>gb|DQ066213.1| Ixodes scapularis isolate ISUFL22 60S acidic ribosomal protein P0 mRNA, complete cds Length = 960 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 358 caaggagtacctcaaggacccg 379 |||||||||||||||||||||| Sbjct: 795 caaggagtacctcaaggacccg 816
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 259 caccatggctgctgcaccgcac 280 |||||||||||||||||||||| Sbjct: 4485696 caccatggctgctgcaccgcac 4485675
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome Length = 2572079 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 gccctgcttgccaagcttggt 100 ||||||||||||||||||||| Sbjct: 1994321 gccctgcttgccaagcttggt 1994301
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 caccatggctgctgcaccgca 279 ||||||||||||||||||||| Sbjct: 279884 caccatggctgctgcaccgca 279864
>emb|BX070623.1|CNS09QNN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC7DB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 514 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 355 gatcaaggagtacctcaaggacccgagcaagtt 387 ||||||||||| | ||||||| ||||||||||| Sbjct: 63 gatcaaggagttcatcaaggatccgagcaagtt 31
>emb|BX070622.1|CNS09QNM Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC7DB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 966 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 355 gatcaaggagtacctcaaggacccgagcaagtt 387 ||||||||||| | ||||||| ||||||||||| Sbjct: 863 gatcaaggagttcatcaaggatccgagcaagtt 895
>emb|BX010374.1|CNS08G62 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA16CG10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 816 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 355 gatcaaggagtacctcaaggacccgagcaagtt 387 ||||||||||| | ||||||| ||||||||||| Sbjct: 429 gatcaaggagttcatcaaggatccgagcaagtt 397
>gb|AE011648.1| Xanthomonas axonopodis pv. citri str. 306, section 26 of 469 of the complete genome Length = 9977 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 260 accatggctgctgcaccgcac 280 ||||||||||||||||||||| Sbjct: 2549 accatggctgctgcaccgcac 2529
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 gtttccatggttgcctcactg 238 ||||||||||||||||||||| Sbjct: 42649624 gtttccatggttgcctcactg 42649604
>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458E05 Length = 193577 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 gtttccatggttgcctcactg 238 ||||||||||||||||||||| Sbjct: 170507 gtttccatggttgcctcactg 170487
>gb|AC135190.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0064H09, complete sequence Length = 146742 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 tcaaggagtacctcaaggac 376 |||||||||||||||||||| Sbjct: 119820 tcaaggagtacctcaaggac 119839
>ref|XM_424589.1| PREDICTED: Gallus gallus similar to basement membrane-specific heparan sulfate proteoglycan core protein precursor (LOC426980), partial mRNA Length = 1127 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 gggtgacaaggtgggctcct 71 |||||||||||||||||||| Sbjct: 1021 gggtgacaaggtgggctcct 1040
>ref|NM_001001876.1| Gallus gallus basement membrane-specific heparan sulfate proteoglycan core protein (HSPG), mRNA Length = 12255 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 gggtgacaaggtgggctcct 71 |||||||||||||||||||| Sbjct: 4158 gggtgacaaggtgggctcct 4177
>gb|AF548987.1| Uncultured organism clone H05-16-63 nitrite reductase (nirS) gene, partial cds Length = 738 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 gcttgccaagcttggtatcc 104 |||||||||||||||||||| Sbjct: 226 gcttgccaagcttggtatcc 207
>ref|XM_783972.1| PREDICTED: Strongylocentrotus purpuratus similar to UNR protein (LOC584092), mRNA Length = 3066 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 atcaagaagggtgacaaggt 63 |||||||||||||||||||| Sbjct: 565 atcaagaagggtgacaaggt 584
>ref|XM_970843.1| PREDICTED: Tribolium castaneum similar to 60S acidic ribosomal protein P0 (DNA-(apurinic or apyrimidinic site) lyase) (Apurinic-apyrimidinic endonuclease), transcript variant 3 (LOC656653), mRNA Length = 1077 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 356 atcaaggagtacctcaaggacccgagcaagtt 387 |||||||||||| ||||||| || |||||||| Sbjct: 851 atcaaggagtacatcaaggatccaagcaagtt 882
>ref|XM_961517.1| PREDICTED: Tribolium castaneum similar to 60S acidic ribosomal protein P0 (DNA-(apurinic or apyrimidinic site) lyase) (Apurinic-apyrimidinic endonuclease), transcript variant 1 (LOC656653), mRNA Length = 1272 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 356 atcaaggagtacctcaaggacccgagcaagtt 387 |||||||||||| ||||||| || |||||||| Sbjct: 1046 atcaaggagtacatcaaggatccaagcaagtt 1077
>ref|XM_970766.1| PREDICTED: Tribolium castaneum similar to 60S acidic ribosomal protein P0 (DNA-(apurinic or apyrimidinic site) lyase) (Apurinic-apyrimidinic endonuclease), transcript variant 2 (LOC656653), mRNA Length = 1028 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 356 atcaaggagtacctcaaggacccgagcaagtt 387 |||||||||||| ||||||| || |||||||| Sbjct: 802 atcaaggagtacatcaaggatccaagcaagtt 833
>emb|AJ584653.1| Gallus gallus mRNA for basement membrane-specific heparan sulfate proteoglycan core protein precursor (HSPG gene) Length = 12255 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 gggtgacaaggtgggctcct 71 |||||||||||||||||||| Sbjct: 4158 gggtgacaaggtgggctcct 4177
>gb|AC006929.4| Arabidopsis thaliana chromosome 2 clone T1E2 map mi54, complete sequence Length = 94884 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 tcaatgcatacaagaatgttcttg 311 |||| ||||||||||||||||||| Sbjct: 1502 tcaaagcatacaagaatgttcttg 1525
>gb|AC005851.3| Arabidopsis thaliana chromosome 2 clone F24D13 map B68, complete sequence Length = 91261 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 tcaatgcatacaagaatgttcttg 311 |||| ||||||||||||||||||| Sbjct: 65707 tcaaagcatacaagaatgttcttg 65730
>gb|AC135644.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0085H07, complete sequence Length = 133291 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 tcaaggagtacctcaaggac 376 |||||||||||||||||||| Sbjct: 130535 tcaaggagtacctcaaggac 130516
>gb|AF067944.1| Caenorhabditis elegans cosmid K10C9, complete sequence Length = 34348 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 tcttcagccccgaggttctt 175 |||||||||||||||||||| Sbjct: 12993 tcttcagccccgaggttctt 12974
>ref|NM_070968.2| Caenorhabditis elegans Seven TM Receptor family member (str-224) (str-224) mRNA, complete cds Length = 1044 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 tcttcagccccgaggttctt 175 |||||||||||||||||||| Sbjct: 254 tcttcagccccgaggttctt 273
>gb|AC097475.2| Homo sapiens BAC clone RP11-95J1 from 4, complete sequence Length = 136159 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 atcaagaagggtgacaaggt 63 |||||||||||||||||||| Sbjct: 71149 atcaagaagggtgacaaggt 71130
>emb|CT573017.5| Mouse DNA sequence from clone RP24-309J23 on chromosome 17, complete sequence Length = 157643 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 gctgataagatcaaggagta 366 |||||||||||||||||||| Sbjct: 8925 gctgataagatcaaggagta 8944
>emb|AL611952.9| Mouse DNA sequence from clone RP23-70K18 on chromosome 4, complete sequence Length = 89500 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 cataccccaccatggctgct 271 |||||||||||||||||||| Sbjct: 83587 cataccccaccatggctgct 83568 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,055,673 Number of Sequences: 3902068 Number of extensions: 3055673 Number of successful extensions: 57403 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 57047 Number of HSP's gapped (non-prelim): 327 length of query: 441 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 419 effective length of database: 17,147,199,772 effective search space: 7184676704468 effective search space used: 7184676704468 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
