ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast46e04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 286 gatgcaggacctgttctcggtcccctcctgcttctcgtcgggcgagaagc 335 ||||||||||||||||||||| || ||||||||||| || |||||||||| Sbjct: 39607388 gatgcaggacctgttctcggtgccgtcctgcttctcctccggcgagaagc 39607339 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 344 gacgcgccggcgtcggcggcg 364 ||||||||||||||||||||| Sbjct: 14042569 gacgcgccggcgtcggcggcg 14042589 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 cgccggcgtcggcggcgccggcga 371 |||||||| ||||||||||||||| Sbjct: 3834820 cgccggcggcggcggcgccggcga 3834843
>dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456E05 Length = 173699 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 286 gatgcaggacctgttctcggtcccctcctgcttctcgtcgggcgagaagc 335 ||||||||||||||||||||| || ||||||||||| || |||||||||| Sbjct: 88344 gatgcaggacctgttctcggtgccgtcctgcttctcctccggcgagaagc 88295
>dbj|AK068178.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130C02, full insert sequence Length = 1312 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 286 gatgcaggacctgttctcggtcccctcctgcttctcgtcgggcgagaagc 335 ||||||||||||||||||||| || ||||||||||| || |||||||||| Sbjct: 211 gatgcaggacctgttctcggtgccgtcctgcttctcctccggcgagaagc 260
>ref|XM_463597.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 975 Score = 65.9 bits (33), Expect = 9e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 287 atgcaggacctgttctcggtcccctcctgcttctcgtcgggcgagaagc 335 |||||||||||||||||||| || ||||||||||| || |||||||||| Sbjct: 1 atgcaggacctgttctcggtgccgtcctgcttctcctccggcgagaagc 49
>gb|AC161424.3| Mus musculus BAC clone RP23-252J6 from chromosome 9, complete sequence Length = 244497 Score = 46.1 bits (23), Expect = 0.083 Identities = 23/23 (100%) Strand = Plus / Minus Query: 204 catcgtccatccatccctccatc 226 ||||||||||||||||||||||| Sbjct: 89639 catcgtccatccatccctccatc 89617
>gb|AC169370.4| Sorghum bicolor clone SB_BBc0011I20, complete sequence Length = 135209 Score = 46.1 bits (23), Expect = 0.083 Identities = 26/27 (96%) Strand = Plus / Minus Query: 347 gcgccggcgtcggcggcgccggcgacc 373 ||||||||| ||||||||||||||||| Sbjct: 51308 gcgccggcgccggcggcgccggcgacc 51282
>gb|AC141872.8| Mus musculus BAC clone RP24-342D9 from chromosome 9, complete sequence Length = 161523 Score = 46.1 bits (23), Expect = 0.083 Identities = 23/23 (100%) Strand = Plus / Minus Query: 204 catcgtccatccatccctccatc 226 ||||||||||||||||||||||| Sbjct: 129949 catcgtccatccatccctccatc 129927
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.083 Identities = 32/35 (91%) Strand = Plus / Plus Query: 346 cgcgccggcgtcggcggcgccggcgaccaggtcgg 380 |||| |||||||||||||||| ||| ||||||||| Sbjct: 518955 cgcgtcggcgtcggcggcgcccgcgcccaggtcgg 518989 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cggcggcgccggcgaccagg 376 |||||||||||||||||||| Sbjct: 177013 cggcggcgccggcgaccagg 177032
>ref|XM_481686.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1551 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 348 cgccggcgtcggcggcgccggcgacc 373 ||||||||||| |||||||||||||| Sbjct: 400 cgccggcgtcgccggcgccggcgacc 375
>ref|XM_468176.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3248 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 351 cggcgtcggcggcgccggcgac 372 |||||||||||||||||||||| Sbjct: 2847 cggcgtcggcggcgccggcgac 2826
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 349 gccggcgtcggcggcgccggcg 370 |||||||||||||||||||||| Sbjct: 334381 gccggcgtcggcggcgccggcg 334360 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 347 gcgccggcgtcggcggcgccggcg 370 ||||||||| |||||||||||||| Sbjct: 1618552 gcgccggcgccggcggcgccggcg 1618529
>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13 Length = 341957 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 349 gccggcgtcggcggcgccggcg 370 |||||||||||||||||||||| Sbjct: 334267 gccggcgtcggcggcgccggcg 334246
>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14 Length = 343050 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 349 gccggcgtcggcggcgccggcg 370 |||||||||||||||||||||| Sbjct: 332591 gccggcgtcggcggcgccggcg 332570
>gb|AC055707.33| Homo sapiens 12 BAC RP11-877E17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 138370 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 267 actgagtggcgagggacaggatgcag 292 |||||| ||||||||||||||||||| Sbjct: 51021 actgaggggcgagggacaggatgcag 51046
>gb|S69429.1| testis-determining gene/SRY homolog [Sminthopsis macroura=striped-faced dunnarts, Genomic, 855 nt] Length = 855 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Plus Query: 347 gcgccggcgtcggcggcgccggcgaccagg 376 ||||||||| |||||||| ||||||||||| Sbjct: 311 gcgccggcggcggcggcggcggcgaccagg 340
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 346 cgcgccggcgtcggcggcgccggcga 371 |||||||||| ||||||||||||||| Sbjct: 19833504 cgcgccggcgccggcggcgccggcga 19833479
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 348 cgccggcgtcggcggcgccggcgacc 373 ||||||||||| |||||||||||||| Sbjct: 14702267 cgccggcgtcgccggcgccggcgacc 14702292 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 348 cgccggcgtcggcggcgccggcgac 372 |||||||||| |||||||||||||| Sbjct: 14724474 cgccggcgtccgcggcgccggcgac 14724498 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 349 gccggcgtcggcggcgccggcgac 372 ||||| |||||||||||||||||| Sbjct: 8867909 gccggagtcggcggcgccggcgac 8867932 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 cggcgtcggcggcgccggcg 370 |||||||||||||||||||| Sbjct: 2164638 cggcgtcggcggcgccggcg 2164657
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 351 cggcgtcggcggcgccggcgac 372 |||||||||||||||||||||| Sbjct: 33494086 cggcgtcggcggcgccggcgac 33494065 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 cgccggcgtcggcggcgccggcgac 372 |||||||| |||||||||||||||| Sbjct: 4950694 cgccggcgacggcggcgccggcgac 4950670
>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0034B12 Length = 124083 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 346 cgcgccggcgtcggcggcgccggcga 371 |||||||||| ||||||||||||||| Sbjct: 57944 cgcgccggcgccggcggcgccggcga 57919
>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0054K20 Length = 153584 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 351 cggcgtcggcggcgccggcgac 372 |||||||||||||||||||||| Sbjct: 68961 cggcgtcggcggcgccggcgac 68940
>dbj|AP004256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1224_G08 Length = 113496 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 348 cgccggcgtcggcggcgccggcgacc 373 ||||||||||| |||||||||||||| Sbjct: 46846 cgccggcgtcgccggcgccggcgacc 46871 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 348 cgccggcgtcggcggcgccggcgac 372 |||||||||| |||||||||||||| Sbjct: 69053 cgccggcgtccgcggcgccggcgac 69077
>gb|AF071081.1|AF071081 Mycobacterium tuberculosis proline-rich mucin homolog gene, complete cds Length = 3946 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 349 gccggcgtcggcggcgccggcg 370 |||||||||||||||||||||| Sbjct: 2079 gccggcgtcggcggcgccggcg 2058
>emb|AJ331744.1|HSA331744 Homo sapiens genomic sequence surrounding NotI site, clone NR5-GC7R Length = 773 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 347 gcgccggcgtcggcggcgccggcgac 372 |||||||||||||||||| ||||||| Sbjct: 83 gcgccggcgtcggcggcggcggcgac 58
>dbj|AK072458.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121E21, full insert sequence Length = 4525 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 346 cgcgccggcgtcggcggcgccggcga 371 |||||||||| ||||||||||||||| Sbjct: 4156 cgcgccggcgccggcggcgccggcga 4181
>dbj|AK072337.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043H01, full insert sequence Length = 3406 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 351 cggcgtcggcggcgccggcgac 372 |||||||||||||||||||||| Sbjct: 3005 cggcgtcggcggcgccggcgac 2984
>dbj|AK071978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088I16, full insert sequence Length = 3248 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 351 cggcgtcggcggcgccggcgac 372 |||||||||||||||||||||| Sbjct: 2846 cggcgtcggcggcgccggcgac 2825
>dbj|D83672.1| Streptomyces albogriseolus DNA for subtilisin-like protease, complete cds Length = 3348 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 321 cgtcgggcgagaagcagctgcc 342 |||||||||||||||||||||| Sbjct: 3003 cgtcgggcgagaagcagctgcc 3024
>ref|XM_481689.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1956 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 cgccggcgtcggcggcgccggcgac 372 |||||||||| |||||||||||||| Sbjct: 276 cgccggcgtccgcggcgccggcgac 252
>ref|XM_481688.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2142 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 cgccggcgtcggcggcgccggcgac 372 |||||||||| |||||||||||||| Sbjct: 299 cgccggcgtccgcggcgccggcgac 275
>ref|XM_470110.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1383 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 349 gccggcgtcggcggcgccggcgaccaggt 377 ||||||| |||||||||||| |||||||| Sbjct: 807 gccggcggcggcggcgccggtgaccaggt 835
>ref|XM_464401.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1319 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 348 cgccggcgtcggcggcgccggcgac 372 |||||||| |||||||||||||||| Sbjct: 423 cgccggcgacggcggcgccggcgac 447
>ref|NM_184033.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2403 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 344 gacgcgccggcgtcggcggcg 364 ||||||||||||||||||||| Sbjct: 22 gacgcgccggcgtcggcggcg 42
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 349 gccggcgtcggcggcgccggcgaccaggt 377 ||||||| |||||||||||| |||||||| Sbjct: 33995468 gccggcggcggcggcgccggtgaccaggt 33995496 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 cggcgtcggcggcgccggcg 370 |||||||||||||||||||| Sbjct: 33670938 cggcgtcggcggcgccggcg 33670957
>gb|AC126689.4| Mus musculus BAC clone RP23-166P10 from chromosome 8, complete sequence Length = 206377 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 202 cccatcgtccatccatccctccatc 226 |||||| |||||||||||||||||| Sbjct: 21606 cccatcatccatccatccctccatc 21630
>gb|AC132120.3| Mus musculus BAC clone RP23-479B19 from chromosome 8, complete sequence Length = 173226 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 202 cccatcgtccatccatccctccatc 226 |||||| |||||||||||||||||| Sbjct: 171352 cccatcatccatccatccctccatc 171376
>ref|XM_548149.2| PREDICTED: Canis familiaris similar to SH3 and cysteine rich domain 2 (LOC491029), mRNA Length = 1317 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 cctccctcccccggccccctc 91 ||||||||||||||||||||| Sbjct: 351 cctccctcccccggccccctc 371
>emb|AL078645.31|HSG115G20 Human DNA sequence from clone GS1-115G20 on chromosome 1 Contains part of the C1orf21 gene for chromosome 1 open reading frame 21, a novel pseudogene and a novel transcript, complete sequence Length = 206089 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 202 cccatcgtccatccatccctccatc 226 |||||||||||||||||| |||||| Sbjct: 29330 cccatcgtccatccatccatccatc 29354
>gb|AC147018.4| Mus musculus BAC clone RP23-284H11 from chromosome 10, complete sequence Length = 182735 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 gtctcctgccctccctccccc 82 ||||||||||||||||||||| Sbjct: 31028 gtctcctgccctccctccccc 31008
>emb|AL020996.6|HS317E23 Human DNA sequence from clone RP1-317E23 on chromosome 1p36.13, complete sequence Length = 100301 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 ctcccccaccacccccgtgcc 170 ||||||||||||||||||||| Sbjct: 57798 ctcccccaccacccccgtgcc 57778
>gb|AC103758.14| Homo sapiens chromosome 8, clone CTD-3135A9, complete sequence Length = 235357 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 202 cccatcgtccatccatccctccatc 226 |||||||||||||||||| |||||| Sbjct: 53565 cccatcgtccatccatccatccatc 53541
>emb|CR385021.12| Zebrafish DNA sequence from clone CH211-200N15 in linkage group 16, complete sequence Length = 148046 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 tcgtccatccatccctccatc 226 ||||||||||||||||||||| Sbjct: 77861 tcgtccatccatccctccatc 77841
>gb|AC094020.2| Homo sapiens chromosome 3 clone RP11-425J9, complete sequence Length = 194729 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 tcctgccctccctcccccggccccc 89 ||||||||||||||||||| ||||| Sbjct: 147117 tcctgccctccctcccccgtccccc 147141
>gb|AC122024.6| Mus musculus BAC clone RP24-378K7 from chromosome 10, complete sequence Length = 183904 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 gtctcctgccctccctccccc 82 ||||||||||||||||||||| Sbjct: 122956 gtctcctgccctccctccccc 122936
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 349 gccggcgtcggcggcgccggcgaccaggt 377 ||||||| |||||||||||| |||||||| Sbjct: 34085940 gccggcggcggcggcgccggtgaccaggt 34085968 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 cggcgtcggcggcgccggcg 370 |||||||||||||||||||| Sbjct: 33761410 cggcgtcggcggcgccggcg 33761429
>gb|AC127430.4| Homo sapiens chromosome 3 clone CTD-2563A18, complete sequence Length = 181750 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 tcctgccctccctcccccggccccc 89 ||||||||||||||||||| ||||| Sbjct: 3648 tcctgccctccctcccccgtccccc 3672
>dbj|AP000056.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 27/28, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 202 cccatcgtccatccatccctccatc 226 |||||||||||||||||| |||||| Sbjct: 51642 cccatcgtccatccatccatccatc 51666
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 349 gccggcgtcggcggcgccggcgaccaggt 377 ||||||| |||||||||||| |||||||| Sbjct: 62223 gccggcggcggcggcgccggtgaccaggt 62195
>dbj|AP005925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0030G18 Length = 167557 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 348 cgccggcgtcggcggcgccggcgac 372 |||||||||| |||||||||||||| Sbjct: 16561 cgccggcgtccgcggcgccggcgac 16585
>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0031B09 Length = 132729 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 cgccggcgtcggcggcgccggcgac 372 |||||||| |||||||||||||||| Sbjct: 21820 cgccggcgacggcggcgccggcgac 21796
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_F01 Length = 113755 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 cgccggcgtcggcggcgccggcgac 372 |||||||| |||||||||||||||| Sbjct: 95433 cgccggcgacggcggcgccggcgac 95409
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 356 tcggcggcgccggcgaccaggtcgg 380 |||||||||| |||||||||||||| Sbjct: 4655847 tcggcggcgcgggcgaccaggtcgg 4655823
>dbj|AP003764.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1051E10 Length = 207782 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 344 gacgcgccggcgtcggcggcg 364 ||||||||||||||||||||| Sbjct: 202871 gacgcgccggcgtcggcggcg 202891
>dbj|AP003258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0463A02 Length = 151041 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 344 gacgcgccggcgtcggcggcg 364 ||||||||||||||||||||| Sbjct: 118314 gacgcgccggcgtcggcggcg 118334
>dbj|AK109737.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-C11, full insert sequence Length = 2008 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 cgccggcgtcggcggcgccggcgac 372 |||||||||| |||||||||||||| Sbjct: 333 cgccggcgtccgcggcgccggcgac 309
>dbj|AK108100.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-A12, full insert sequence Length = 1319 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 348 cgccggcgtcggcggcgccggcgac 372 |||||||| |||||||||||||||| Sbjct: 423 cgccggcgacggcggcgccggcgac 447
>dbj|AK099878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111I02, full insert sequence Length = 2283 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 cgccggcgtcggcggcgccggcgac 372 |||||||||| |||||||||||||| Sbjct: 334 cgccggcgtccgcggcgccggcgac 310
>dbj|AK099417.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013006H18, full insert sequence Length = 1956 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 cgccggcgtcggcggcgccggcgac 372 |||||||||| |||||||||||||| Sbjct: 275 cgccggcgtccgcggcgccggcgac 251
>dbj|AK067028.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091B08, full insert sequence Length = 2142 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 cgccggcgtcggcggcgccggcgac 372 |||||||||| |||||||||||||| Sbjct: 299 cgccggcgtccgcggcgccggcgac 275
>gb|AC003982.1|AC003982 Homo sapiens PAC clone 166H1 from 12q, complete sequence Length = 122302 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 tcgtccatccatccctccatc 226 ||||||||||||||||||||| Sbjct: 57640 tcgtccatccatccctccatc 57620
>dbj|AP001720.1| Homo sapiens genomic DNA, chromosome 21q, section 64/105 Length = 340000 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 202 cccatcgtccatccatccctccatc 226 |||||||||||||||||| |||||| Sbjct: 332513 cccatcgtccatccatccatccatc 332537
>dbj|AP000330.3| Homo sapiens genomic DNA, chromosome 21 clone:RP1-140K16, complete sequence Length = 170368 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 202 cccatcgtccatccatccctccatc 226 |||||||||||||||||| |||||| Sbjct: 78102 cccatcgtccatccatccatccatc 78126
>gb|DQ317970.1| Danio rerio follistatin-like 1 mRNA, complete cds Length = 1446 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 gagaagcagctgccggacgcg 349 ||||||||||||||||||||| Sbjct: 24 gagaagcagctgccggacgcg 4
>dbj|AP000171.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone B2344F14-f50E8, segment 7/9, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 202 cccatcgtccatccatccctccatc 226 |||||||||||||||||| |||||| Sbjct: 42272 cccatcgtccatccatccatccatc 42296
>ref|XM_550300.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1389 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 cgccggcgtcggcggcgccggcga 371 |||||||| ||||||||||||||| Sbjct: 990 cgccggcggcggcggcgccggcga 967
>ref|NM_191592.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1677 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 cgccggcgtcggcggcgccggcga 371 |||||||| ||||||||||||||| Sbjct: 1280 cgccggcggcggcggcgccggcga 1257
>ref|XM_480952.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2066 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 349 gccggcgtcggcggcgccggcgac 372 ||||| |||||||||||||||||| Sbjct: 75 gccggagtcggcggcgccggcgac 98
>ref|XM_480005.1| Oryza sativa (japonica cultivar-group), mRNA Length = 690 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 cggcgtcggcggcgccggcg 370 |||||||||||||||||||| Sbjct: 275 cggcgtcggcggcgccggcg 256
>ref|XM_471236.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 672 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 cgtcggcggcgccggcgaccaggt 377 ||||| |||||||||||||||||| Sbjct: 84 cgtcgccggcgccggcgaccaggt 107
>ref|XM_470048.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1307 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 cggcgtcggcggcgccggcg 370 |||||||||||||||||||| Sbjct: 626 cggcgtcggcggcgccggcg 645
>ref|XM_520175.1| PREDICTED: Pan troglodytes similar to hypothetical protein (LOC464644), mRNA Length = 1734 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 341 ccggacgcgccggcgtcggcggcgccgg 368 |||||| ||||||||| ||||||||||| Sbjct: 110 ccggacccgccggcgttggcggcgccgg 137
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 cgcgccggcgtcggcggcgc 365 |||||||||||||||||||| Sbjct: 1239402 cgcgccggcgtcggcggcgc 1239421
>ref|XM_473231.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1608 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 cgccggcgtcggcggcgccggcga 371 |||||||| ||||||||||||||| Sbjct: 178 cgccggcggcggcggcgccggcga 155
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tcggcggcgccggcgaccag 375 |||||||||||||||||||| Sbjct: 88677 tcggcggcgccggcgaccag 88658
>gb|AC133608.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0085G12, complete sequence Length = 121470 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 349 gccggcgtcggcggcgccggcgac 372 ||||||| |||||||||||||||| Sbjct: 113994 gccggcggcggcggcgccggcgac 113971
>gb|AC135569.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018F17, complete sequence Length = 104291 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 349 gccggcgtcggcggcgccggcgac 372 ||||||| |||||||||||||||| Sbjct: 20294 gccggcggcggcggcgccggcgac 20271
>gb|AC112361.5| Rattus norvegicus 9 BAC CH230-61F12 (Children's Hospital Oakland Research Institute) complete sequence Length = 216648 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 ccatcgtccatccatccctccatc 226 ||||||||||||||||| |||||| Sbjct: 172387 ccatcgtccatccatccatccatc 172364
>gb|AC096938.8| Rattus norvegicus 16 BAC CH230-49B24 (Children's Hospital Oakland Research Institute) complete sequence Length = 220401 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 203 ccatcgtccatccatccctccatc 226 ||||||||||||||||| |||||| Sbjct: 32584 ccatcgtccatccatccatccatc 32607
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 cgcgccggcgtcggcggcgccggc 369 |||| ||||||||||||||||||| Sbjct: 2496258 cgcgtcggcgtcggcggcgccggc 2496235
>gb|AC125276.18| Mus musculus chromosome 10, clone RP24-175N4, complete sequence Length = 143671 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 tccctccatcacctcgtgtc 236 |||||||||||||||||||| Sbjct: 128156 tccctccatcacctcgtgtc 128137
>ref|XM_584953.2| PREDICTED: Bos taurus similar to LATS, large tumor suppressor, homolog 2 (LOC508208), mRNA Length = 4240 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 cgccggcgtcggcggcgccg 367 |||||||||||||||||||| Sbjct: 615 cgccggcgtcggcggcgccg 634
>gb|BC015722.2| Homo sapiens hypothetical protein FLJ10925, mRNA (cDNA clone MGC:17978 IMAGE:3920412), complete cds Length = 2563 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cggcggcgccggcgaccagg 376 |||||||||||||||||||| Sbjct: 462 cggcggcgccggcgaccagg 481
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 gcgccggcgtcggcggcgccggcg 370 ||||||||||||||| |||||||| Sbjct: 1813445 gcgccggcgtcggcgtcgccggcg 1813468
>gb|AC140314.2| Mus musculus BAC clone RP23-395L3 from chromosome 12, complete sequence Length = 191322 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 tctcctgccctccctccccc 82 |||||||||||||||||||| Sbjct: 8569 tctcctgccctccctccccc 8550
>gb|AC158582.2| Mus musculus chromosome 7, clone RP24-173K12, complete sequence Length = 169636 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tcgctagctagccagcctac 53 |||||||||||||||||||| Sbjct: 79954 tcgctagctagccagcctac 79973
>gb|AC016814.14| Mus musculus chromosome 1, clone RP23-2M16, complete sequence Length = 247961 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 202 cccatcgtccatccatccctccatcacc 229 |||||| ||||||||||| ||||||||| Sbjct: 149882 cccatcatccatccatccatccatcacc 149909
>gb|AC105297.35| Mus musculus strain C57BL/6J clone rp23-14k19 map 17, complete sequence Length = 236275 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 ccatcgtccatccatccctccatc 226 ||||||||||||||||| |||||| Sbjct: 233244 ccatcgtccatccatccatccatc 233221
>gb|AY523969.1| Homo sapiens catenin (cadherin-associated protein), alpha-like 1 (CTNNAL1) gene, complete cds Length = 74429 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 341 ccggacgcgccggcgtcggcggcgccgg 368 |||||| ||||||||| ||||||||||| Sbjct: 2022 ccggacccgccggcgttggcggcgccgg 2049
>gb|AC117058.19| Rattus norvegicus 16 BAC CH230-318I9 (Children's Hospital Oakland Research Institute) complete sequence Length = 181157 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 ccatcgtccatccatccctccatc 226 ||||||||||||||||| |||||| Sbjct: 75748 ccatcgtccatccatccatccatc 75725
>emb|CR936442.13| Zebrafish DNA sequence from clone DKEY-266F7 in linkage group 19, complete sequence Length = 244065 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tccatccatccctccatcac 228 |||||||||||||||||||| Sbjct: 86898 tccatccatccctccatcac 86879 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tccatccatccctccatcac 228 |||||||||||||||||||| Sbjct: 86583 tccatccatccctccatcac 86564
>gb|AC004131.1|HUAC004131 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-69G12, complete sequence Length = 77713 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gacctgttctcggtcccctc 312 |||||||||||||||||||| Sbjct: 53655 gacctgttctcggtcccctc 53636
>gb|AC095025.2| Sus scrofa clone RP44-93L12, complete sequence Length = 176757 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gccctccctcccccggcccc 88 |||||||||||||||||||| Sbjct: 149540 gccctccctcccccggcccc 149559
>emb|CR405694.7| Zebrafish DNA sequence from clone DKEY-21A6 in linkage group 17, complete sequence Length = 207156 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 cgtccatccatccctccatc 226 |||||||||||||||||||| Sbjct: 82156 cgtccatccatccctccatc 82175
>emb|CR696006.2|CNS0FZZM Tetraodon nigroviridis full-length cDNA Length = 788 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cggcggcgccggcgaccagg 376 |||||||||||||||||||| Sbjct: 325 cggcggcgccggcgaccagg 306
>gb|AC004963.2| Homo sapiens PAC clone RP5-1102A12 from 7, complete sequence Length = 173627 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tccatccatccctccatcac 228 |||||||||||||||||||| Sbjct: 108076 tccatccatccctccatcac 108057
>gb|AC163625.5| Mus musculus BAC clone RP23-135K11 from chromosome 8, complete sequence Length = 228750 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cgtccatccatccctccatc 226 |||||||||||||||||||| Sbjct: 116857 cgtccatccatccctccatc 116838
>emb|AJ011500.1|SVI011500 Streptomyces violaceoruber Tu22 granaticin biosynthetic gene cluster Length = 39250 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 gtcggcggcgccggcgacca 374 |||||||||||||||||||| Sbjct: 29628 gtcggcggcgccggcgacca 29609
>ref|NM_003798.1| Homo sapiens catenin (cadherin-associated protein), alpha-like 1 (CTNNAL1), mRNA Length = 2446 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 341 ccggacgcgccggcgtcggcggcgccgg 368 |||||| ||||||||| ||||||||||| Sbjct: 57 ccggacccgccggcgttggcggcgccgg 84
>emb|AL591386.19| Human DNA sequence from clone RP11-349K21 on chromosome 9, complete sequence Length = 69657 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tccatccatccctccatcac 228 |||||||||||||||||||| Sbjct: 44654 tccatccatccctccatcac 44673
>emb|AL390070.11| Human DNA sequence from clone RP11-99M15 on chromosome 1 Contains a novel gene, complete sequence Length = 66259 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ccctccctcccccggccccc 89 |||||||||||||||||||| Sbjct: 62886 ccctccctcccccggccccc 62905
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 cggcgtcggcggcgccggcg 370 |||||||||||||||||||| Sbjct: 3762226 cggcgtcggcggcgccggcg 3762207
>emb|AL354797.16| Human DNA sequence from clone RP11-115J22 on chromosome 9q31.3-33.2 Contains the 5' end of the IKBKAP gene encoding inhibitor of kappa light polypeptide gene enhancer in B-cells (kinase complex-associated protein (IKAP)), the C9orf6 gene for chromosome 9 open reading frame 6, the 5' end of the C9orf5 gene for chromosome 9 open reading frame 5, the 3' end of the CTNNAL1 gene encoding Catenin (cadherin-associated protein) alpha-like 1, and two CpG islands, complete sequence Length = 188134 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 341 ccggacgcgccggcgtcggcggcgccgg 368 |||||| ||||||||| ||||||||||| Sbjct: 108877 ccggacccgccggcgttggcggcgccgg 108850
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 356 tcggcggcgccggcgaccaggtcg 379 |||||||||||||||| ||||||| Sbjct: 2902599 tcggcggcgccggcgagcaggtcg 2902576
>gb|AC137507.3| Oryza sativa chromosome 3 BAC OSJNBb0033J23 genomic sequence, complete sequence Length = 126862 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 cggcgtcggcggcgccggcg 370 |||||||||||||||||||| Sbjct: 42307 cggcgtcggcggcgccggcg 42326
>emb|X52623.1|OS4CL Rice 4-CL gene for 4-coumarate-CoA ligase (EC 6.2.1.12) Length = 5225 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 349 gccggcgtcggcggcgccggcgac 372 ||||| |||||||||||||||||| Sbjct: 564 gccggagtcggcggcgccggcgac 587
>emb|X16300.1|SVPKS Streptomyces violaceoruber polyketide synthase gene cluster Length = 5820 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 gtcggcggcgccggcgacca 374 |||||||||||||||||||| Sbjct: 2444 gtcggcggcgccggcgacca 2425
>emb|X16144.1|SVGRA S. violaceoruber DNA for granaticin polyketide synthase Length = 6793 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 gtcggcggcgccggcgacca 374 |||||||||||||||||||| Sbjct: 2504 gtcggcggcgccggcgacca 2485
>emb|CR858476.1| Pongo pygmaeus mRNA; cDNA DKFZp468D066 (from clone DKFZp468D066) Length = 2424 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 341 ccggacgcgccggcgtcggcggcgccgg 368 |||||| ||||||||| ||||||||||| Sbjct: 26 ccggacccgccggcgttggcggcgccgg 53
>emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome; segment 5/13 Length = 348264 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 347 gcgccggcgtcggcggcgccggcg 370 ||||||||| |||||||||||||| Sbjct: 235626 gcgccggcgccggcggcgccggcg 235603
>emb|BX295538.1|NC45B12 Neurospora crassa DNA linkage group VI Cosmid clone 45B12 Length = 37178 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 199 tagcccatcgtccatccatccctccatc 226 ||||||||| ||||||||||| |||||| Sbjct: 17149 tagcccatcatccatccatccatccatc 17122
>emb|BX248339.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 6/14 Length = 300050 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 347 gcgccggcgtcggcggcgccggcg 370 ||||||||| |||||||||||||| Sbjct: 997 gcgccggcgccggcggcgccggcg 974
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 cggcgtcggcggcgccggcg 370 |||||||||||||||||||| Sbjct: 284000 cggcgtcggcggcgccggcg 284019
>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29 Length = 299050 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 cggcgtcggcggcgccggcg 370 |||||||||||||||||||| Sbjct: 18008 cggcgtcggcggcgccggcg 17989
>emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095E20, complete sequence Length = 138572 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 354 cgtcggcggcgccggcgaccaggt 377 ||||| |||||||||||||||||| Sbjct: 105764 cgtcgccggcgccggcgaccaggt 105741
>emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10, complete sequence Length = 141545 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 cgccggcgtcggcggcgccggcga 371 |||||||| ||||||||||||||| Sbjct: 17163 cgccggcggcggcggcgccggcga 17186
>emb|BX927096.16| Zebrafish DNA sequence from clone CH211-262J3 in linkage group 22, complete sequence Length = 72993 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cgtccatccatccctccatc 226 |||||||||||||||||||| Sbjct: 33662 cgtccatccatccctccatc 33643
>gb|BC044767.1| Homo sapiens hypothetical protein FLJ31951, mRNA (cDNA clone IMAGE:4827067) Length = 3665 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 347 gcgccggcgtcggcggcgccggcg 370 |||||||||||||||||| ||||| Sbjct: 74 gcgccggcgtcggcggcggcggcg 51
>gb|BC042684.1| Homo sapiens hypothetical protein FLJ31951, mRNA (cDNA clone MGC:42676 IMAGE:4826810), complete cds Length = 3665 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 347 gcgccggcgtcggcggcgccggcg 370 |||||||||||||||||| ||||| Sbjct: 74 gcgccggcgtcggcggcggcggcg 51
>emb|AL627261.10| Zebrafish DNA sequence from clone RP71-1N11 in linkage group 9 Contains three CpG islands, complete sequence Length = 147392 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 cgtccatccatccctccatc 226 |||||||||||||||||||| Sbjct: 75114 cgtccatccatccctccatc 75133
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 cggcgtcggcggcgccggcg 370 |||||||||||||||||||| Sbjct: 113082 cggcgtcggcggcgccggcg 113063
>emb|BX322643.8| Zebrafish DNA sequence from clone CH211-281E1 in linkage group 21, complete sequence Length = 153972 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cgtccatccatccctccatc 226 |||||||||||||||||||| Sbjct: 150667 cgtccatccatccctccatc 150648
>gb|AF479828.1| Escherichia coli O91:H21 Shiga toxin 2 variant d A subunit (stx2d1A) gene, stx2d1A-2d1 allele, complete cds; Shiga toxin 2 variant d B subunit (stx2dB) gene, stx2dB-1 allele, complete cds; and unknown genes Length = 8892 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 tccatggcgctcccccacca 160 |||||||||||||||||||| Sbjct: 8554 tccatggcgctcccccacca 8535
>emb|BX511308.11| Zebrafish DNA sequence from clone DKEYP-118E10 in linkage group 15, complete sequence Length = 123109 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cgtccatccatccctccatc 226 |||||||||||||||||||| Sbjct: 4811 cgtccatccatccctccatc 4792
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 gccggcgtcggcggcgccgg 368 |||||||||||||||||||| Sbjct: 1369247 gccggcgtcggcggcgccgg 1369228
>emb|BX322638.6| Zebrafish DNA sequence from clone DKEYP-114C5 in linkage group 11, complete sequence Length = 85185 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tccatccatccctccatcac 228 |||||||||||||||||||| Sbjct: 34785 tccatccatccctccatcac 34804
>emb|CR609649.1| full-length cDNA clone CS0DI070YN14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2295 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 341 ccggacgcgccggcgtcggcggcgccgg 368 |||||| ||||||||| ||||||||||| Sbjct: 55 ccggacccgccggcgttggcggcgccgg 82
>gb|AC011376.5| Homo sapiens chromosome 5 clone CTB-11I22, complete sequence Length = 132768 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 gcgccggcgtcggcggcgccggcg 370 |||||||||||||||||| ||||| Sbjct: 80975 gcgccggcgtcggcggcggcggcg 80998
>dbj|AK022926.1| Homo sapiens cDNA FLJ12864 fis, clone NT2RP2003604, highly similar to Homo sapiens alpha-catenin-like protein (CTNNAL1) mRNA Length = 2455 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 341 ccggacgcgccggcgtcggcggcgccgg 368 |||||| ||||||||| ||||||||||| Sbjct: 71 ccggacccgccggcgttggcggcgccgg 98
>dbj|AK022834.1| Homo sapiens cDNA FLJ12772 fis, clone NT2RP2001634, highly similar to Homo sapiens alpha-catenin-like protein mRNA Length = 2488 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 341 ccggacgcgccggcgtcggcggcgccgg 368 |||||| ||||||||| ||||||||||| Sbjct: 101 ccggacccgccggcgttggcggcgccgg 128
>gb|AF470046.1| Oncorhynchus mykiss microsatellite OMM1282 sequence Length = 514 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 203 ccatcgtccatccatccctccatc 226 ||||||||||||||||| |||||| Sbjct: 258 ccatcgtccatccatccatccatc 281
>gb|AC073842.5| Homo sapiens BAC clone RP11-506M12 from 7, complete sequence Length = 132764 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cggcggcgccggcgaccagg 376 |||||||||||||||||||| Sbjct: 46476 cggcggcgccggcgaccagg 46495
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 cggcgtcggcggcgccggcg 370 |||||||||||||||||||| Sbjct: 4817257 cggcgtcggcggcgccggcg 4817276 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tcggcggcgccggcgaccag 375 |||||||||||||||||||| Sbjct: 1753069 tcggcggcgccggcgaccag 1753050 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 cgccggcgtcggcggcgccg 367 |||||||||||||||||||| Sbjct: 56544 cgccggcgtcggcggcgccg 56525
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 cggcgtcggcggcgccggcg 370 |||||||||||||||||||| Sbjct: 183626 cggcgtcggcggcgccggcg 183607
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 347 gcgccggcgtcggcggcgccggcg 370 ||||||||||||||| |||||||| Sbjct: 2536149 gcgccggcgtcggcgccgccggcg 2536126
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 cgccggcgtcggcggcgccggcga 371 |||||||| ||||||||||||||| Sbjct: 26240586 cgccggcggcggcggcgccggcga 26240609 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 354 cgtcggcggcgccggcgaccaggt 377 ||||| |||||||||||||||||| Sbjct: 2489862 cgtcgccggcgccggcgaccaggt 2489839
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 gacgcgccggcgtcggcggc 363 |||||||||||||||||||| Sbjct: 25770056 gacgcgccggcgtcggcggc 25770075 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 347 gcgccggcgtcggcggcgccggcg 370 ||||||||| |||||||||||||| Sbjct: 25539070 gcgccggcgacggcggcgccggcg 25539047
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tcggcggcgccggcgaccag 375 |||||||||||||||||||| Sbjct: 28130122 tcggcggcgccggcgaccag 28130103 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 349 gccggcgtcggcggcgccggcgac 372 ||||||| |||||||||||||||| Sbjct: 17046338 gccggcggcggcggcgccggcgac 17046315
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 cggcgtcggcggcgccggcg 370 |||||||||||||||||||| Sbjct: 15714660 cggcgtcggcggcgccggcg 15714679
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 cggcgtcggcggcgccggcg 370 |||||||||||||||||||| Sbjct: 4745077 cggcgtcggcggcgccggcg 4745058
>gb|BC094727.1| Homo sapiens cDNA clone IMAGE:30335944, containing frame-shift errors Length = 2547 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cggcggcgccggcgaccagg 376 |||||||||||||||||||| Sbjct: 468 cggcggcgccggcgaccagg 487
>gb|AC114778.5| Homo sapiens BAC clone RP11-516O5 from 2, complete sequence Length = 187842 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ctagccagcctacgccctac 60 |||||||||||||||||||| Sbjct: 68029 ctagccagcctacgccctac 68010
>gb|AC018445.21| Homo sapiens chromosome 18, clone RP11-196B3, complete sequence Length = 162265 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 tcgtccatccatccctccatcacc 229 |||||||||||||| ||||||||| Sbjct: 153719 tcgtccatccatccatccatcacc 153696
>gb|AC120396.6| Mus musculus chromosome 1, clone RP24-331B5, complete sequence Length = 194086 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 202 cccatcgtccatccatccctccatcacc 229 |||||| ||||||||||| ||||||||| Sbjct: 182778 cccatcatccatccatccatccatcacc 182751
>gb|AC154744.2| Mus musculus BAC clone RP24-394N17 from chromosome 12, complete sequence Length = 165140 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 tctcctgccctccctccccc 82 |||||||||||||||||||| Sbjct: 108832 tctcctgccctccctccccc 108813
>dbj|AK223230.1| Homo sapiens mRNA for catenin, alpha-like 1 variant, clone: STM02543 Length = 2486 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 341 ccggacgcgccggcgtcggcggcgccgg 368 |||||| ||||||||| ||||||||||| Sbjct: 71 ccggacccgccggcgttggcggcgccgg 98
>gb|AC134300.3| Homo sapiens chromosome 16 clone CTC-496I23, complete sequence Length = 171048 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gacctgttctcggtcccctc 312 |||||||||||||||||||| Sbjct: 59629 gacctgttctcggtcccctc 59648
>ref|NM_018275.3| Homo sapiens hypothetical protein FLJ10925 (FLJ10925), mRNA Length = 2563 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cggcggcgccggcgaccagg 376 |||||||||||||||||||| Sbjct: 462 cggcggcgccggcgaccagg 481
>gb|AC079834.8| Homo sapiens BAC clone CTD-2308L22 from 2, complete sequence Length = 108621 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cgtccatccatccctccatc 226 |||||||||||||||||||| Sbjct: 51670 cgtccatccatccctccatc 51651
>gb|AC023090.12| Homo sapiens chromosome 18, clone RP11-800A18, complete sequence Length = 180016 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 tcgtccatccatccctccatcacc 229 |||||||||||||| ||||||||| Sbjct: 6270 tcgtccatccatccatccatcacc 6247
>dbj|AP004690.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0437G01 Length = 147101 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 349 gccggcgtcggcggcgccggcgac 372 ||||| |||||||||||||||||| Sbjct: 145658 gccggagtcggcggcgccggcgac 145681
>dbj|AP003876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_D01 Length = 97862 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 cggcgtcggcggcgccggcg 370 |||||||||||||||||||| Sbjct: 42900 cggcgtcggcggcgccggcg 42919
>dbj|AP003859.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1033_B09 Length = 120648 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 349 gccggcgtcggcggcgccggcgac 372 ||||| |||||||||||||||||| Sbjct: 51552 gccggagtcggcggcgccggcgac 51575
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 cggcgtcggcggcgccggcg 370 |||||||||||||||||||| Sbjct: 7267290 cggcgtcggcggcgccggcg 7267271 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tcggcggcgccggcgaccag 375 |||||||||||||||||||| Sbjct: 6565050 tcggcggcgccggcgaccag 6565069 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 cggcgtcggcggcgccggcg 370 |||||||||||||||||||| Sbjct: 162429 cggcgtcggcggcgccggcg 162448
>emb|BX649250.6| Zebrafish DNA sequence from clone DKEY-53B2 in linkage group 20, complete sequence Length = 165729 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cgtccatccatccctccatc 226 |||||||||||||||||||| Sbjct: 35581 cgtccatccatccctccatc 35562
>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0089K24 Length = 154137 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 348 cgccggcgtcggcggcgccggcga 371 |||||||| ||||||||||||||| Sbjct: 108362 cgccggcggcggcggcgccggcga 108385
>dbj|AP003520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021H10 Length = 142659 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 cggcgtcggcggcgccggcg 370 |||||||||||||||||||| Sbjct: 50298 cggcgtcggcggcgccggcg 50317
>dbj|AB004563.1| Terrabacter sp. dbfB, dbfC and orfL(3, 4, 5 and 6) genes involved in the degradation of dibenzofuran, complete cds Length = 8599 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 350 ccggcgtcggcggcgccggcgaccaggt 377 |||||| ||||||||||||| ||||||| Sbjct: 2688 ccggcgccggcggcgccggccaccaggt 2715
>emb|AL929096.5| Zebrafish DNA sequence from clone DKEY-216E9 in linkage group 17, complete sequence Length = 192592 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 ccatcgtccatccatccctccatc 226 ||||| |||||||||||||||||| Sbjct: 191228 ccatcatccatccatccctccatc 191205
>dbj|AK121009.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047B10, full insert sequence Length = 3642 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 cgccggcgtcggcggcgccggcga 371 |||||||| ||||||||||||||| Sbjct: 290 cgccggcggcggcggcgccggcga 267
>dbj|AK120053.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000K15, full insert sequence Length = 3158 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 cggcgtcggcggcgccggcg 370 |||||||||||||||||||| Sbjct: 238 cggcgtcggcggcgccggcg 219
>gb|AC153505.6| Mus musculus 10 BAC RP23-336I13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190636 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 tccctccatcacctcgtgtc 236 |||||||||||||||||||| Sbjct: 185029 tccctccatcacctcgtgtc 185048
>dbj|AK107842.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-H11, full insert sequence Length = 690 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 cggcgtcggcggcgccggcg 370 |||||||||||||||||||| Sbjct: 275 cggcgtcggcggcgccggcg 256
>dbj|AK107179.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-H01, full insert sequence Length = 1447 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 cggcgtcggcggcgccggcg 370 |||||||||||||||||||| Sbjct: 265 cggcgtcggcggcgccggcg 246
>dbj|AK102649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101A20, full insert sequence Length = 1162 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tcggcggcgccggcgaccag 375 |||||||||||||||||||| Sbjct: 371 tcggcggcgccggcgaccag 390
>dbj|AK101660.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057J01, full insert sequence Length = 1975 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 cgccggcgtcggcggcgccggcga 371 |||||||| ||||||||||||||| Sbjct: 1284 cgccggcggcggcggcgccggcga 1261
>dbj|AK101155.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027E14, full insert sequence Length = 1193 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tcggcggcgccggcgaccag 375 |||||||||||||||||||| Sbjct: 375 tcggcggcgccggcgaccag 394
>dbj|AK073595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048M21, full insert sequence Length = 1153 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tcggcggcgccggcgaccag 375 |||||||||||||||||||| Sbjct: 362 tcggcggcgccggcgaccag 381
>dbj|AK073313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027F03, full insert sequence Length = 1389 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 cgccggcgtcggcggcgccggcga 371 |||||||| ||||||||||||||| Sbjct: 990 cgccggcggcggcggcgccggcga 967
>dbj|AK069932.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036P12, full insert sequence Length = 2066 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 349 gccggcgtcggcggcgccggcgac 372 ||||| |||||||||||||||||| Sbjct: 75 gccggagtcggcggcgccggcgac 98
>gb|AF134871.1|HSCTNNAL01 Homo sapiens alpha-catulin (CTNNAL1) gene, exon 1 Length = 206 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 341 ccggacgcgccggcgtcggcggcgccgg 368 |||||| ||||||||| ||||||||||| Sbjct: 67 ccggacccgccggcgttggcggcgccgg 94
>gb|AF135021.1|AF135021 Homo sapiens alpha2-catulin (CTNNAL1) mRNA, alternatively spliced, complete cds Length = 2481 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 341 ccggacgcgccggcgtcggcggcgccgg 368 |||||| ||||||||| ||||||||||| Sbjct: 57 ccggacccgccggcgttggcggcgccgg 84
>gb|U97067.1|HSU97067 Homo sapiens alpha-catenin-like protein mRNA, complete cds Length = 2446 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 341 ccggacgcgccggcgtcggcggcgccgg 368 |||||| ||||||||| ||||||||||| Sbjct: 57 ccggacccgccggcgttggcggcgccgg 84
>emb|AL606705.23| Zebrafish DNA sequence from clone BUSM1-175P5 in linkage group 15, complete sequence Length = 92464 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 cgtccatccatccctccatc 226 |||||||||||||||||||| Sbjct: 14449 cgtccatccatccctccatc 14468
>emb|BX323550.13| Zebrafish DNA sequence from clone DKEYP-70F9 in linkage group 22, complete sequence Length = 200031 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 cgtccatccatccctccatc 226 |||||||||||||||||||| Sbjct: 97227 cgtccatccatccctccatc 97208
>dbj|AK062282.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-C06, full insert sequence Length = 1677 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 cgccggcgtcggcggcgccggcga 371 |||||||| ||||||||||||||| Sbjct: 1280 cgccggcggcggcggcgccggcga 1257
>emb|CR388184.33| Zebrafish DNA sequence from clone CH211-261O3 in linkage group 8, complete sequence Length = 180216 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 203 ccatcgtccatccatccctccatc 226 ||||||||||||||||| |||||| Sbjct: 105596 ccatcgtccatccatccatccatc 105619
>emb|AL049833.5|CNS0000D Human chromosome 14 DNA sequence BAC R-907D1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 203266 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 cgtccatccatccctccatc 226 |||||||||||||||||||| Sbjct: 71419 cgtccatccatccctccatc 71438
>gb|AF030233.1|AF030233 Homo sapiens alpha-catenin-like protein (CTNNAL1) mRNA, complete cds Length = 2442 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 341 ccggacgcgccggcgtcggcggcgccgg 368 |||||| ||||||||| ||||||||||| Sbjct: 58 ccggacccgccggcgttggcggcgccgg 85
>gb|AF080071.1|AF080071 Homo sapiens alpha-catenin-like protein mRNA, complete cds Length = 2450 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 341 ccggacgcgccggcgtcggcggcgccgg 368 |||||| ||||||||| ||||||||||| Sbjct: 53 ccggacccgccggcgttggcggcgccgg 80
>emb|AL929284.12| Zebrafish DNA sequence from clone CH211-160H23 in linkage group 15, complete sequence Length = 179458 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 tccatccatccctccatcac 228 |||||||||||||||||||| Sbjct: 43957 tccatccatccctccatcac 43938
>emb|AL844544.9| Mouse DNA sequence from clone RP23-230B1 on chromosome 2, complete sequence Length = 156426 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ggtctcctgccctccctccc 80 |||||||||||||||||||| Sbjct: 144224 ggtctcctgccctccctccc 144243
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 cggcggcgccggcgaccagg 376 |||||||||||||||||||| Sbjct: 2945977 cggcggcgccggcgaccagg 2945996
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 cgccggcgtcggcggcgccg 367 |||||||||||||||||||| Sbjct: 635296 cgccggcgtcggcggcgccg 635315
>gb|M92914.1|DROMASTM Drosophila virilis mastermind gene, complete cds Length = 5650 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 cggcgtcggcggcgccggcg 370 |||||||||||||||||||| Sbjct: 4422 cggcgtcggcggcgccggcg 4441
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tcggcggcgccggcgaccag 375 |||||||||||||||||||| Sbjct: 28115000 tcggcggcgccggcgaccag 28114981 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 349 gccggcgtcggcggcgccggcgac 372 ||||||| |||||||||||||||| Sbjct: 17141019 gccggcggcggcggcgccggcgac 17140996
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 gacgcgccggcgtcggcggc 363 |||||||||||||||||||| Sbjct: 25698232 gacgcgccggcgtcggcggc 25698251 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 347 gcgccggcgtcggcggcgccggcg 370 ||||||||| |||||||||||||| Sbjct: 25467246 gcgccggcgacggcggcgccggcg 25467223
>emb|AL928781.4|CNS08CCB Oryza sativa chromosome 12, . BAC OSJNBa0070E09 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144084 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 347 gcgccggcgtcggcggcgccggcg 370 ||||||||| |||||||||||||| Sbjct: 108452 gcgccggcgacggcggcgccggcg 108429
>gb|AF006070.1|AF006070 Homo sapiens alpha-catenin related protein (ACRP) mRNA, complete cds Length = 2437 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 341 ccggacgcgccggcgtcggcggcgccgg 368 |||||| ||||||||| ||||||||||| Sbjct: 56 ccggacccgccggcgttggcggcgccgg 83
>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 167131 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 gacgcgccggcgtcggcggc 363 |||||||||||||||||||| Sbjct: 137294 gacgcgccggcgtcggcggc 137313
>emb|CT010463.9| Mouse DNA sequence from clone RP23-193M19 on chromosome 12, complete sequence Length = 250364 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 tctcctgccctccctccccc 82 |||||||||||||||||||| Sbjct: 205529 tctcctgccctccctccccc 205510
>gb|AC140369.2| Mus musculus BAC clone RP23-200L3 from 3, complete sequence Length = 191613 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 ccatcgtccatccatccctccatc 226 ||||||||||||||||| |||||| Sbjct: 77472 ccatcgtccatccatccatccatc 77449
>emb|CT025573.9| Mouse DNA sequence from clone RP24-274P18 on chromosome 17, complete sequence Length = 210893 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 ccatcgtccatccatccctccatc 226 ||||||||||||||||| |||||| Sbjct: 58255 ccatcgtccatccatccatccatc 58232
>gb|AC109446.2| Homo sapiens chromosome 16 clone CTD-2576D5, complete sequence Length = 193519 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tccatccatccctccatcac 228 |||||||||||||||||||| Sbjct: 106523 tccatccatccctccatcac 106542
>gb|AC114988.21| Mus musculus chromosome 7, clone RP23-207N5, complete sequence Length = 196013 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tcgctagctagccagcctac 53 |||||||||||||||||||| Sbjct: 16040 tcgctagctagccagcctac 16059
>emb|AL773530.9| Mouse DNA sequence from clone RP23-180A8 on chromosome 2, complete sequence Length = 188424 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 tgggttcgctagctagccagccta 52 ||||||| |||||||||||||||| Sbjct: 81505 tgggttctctagctagccagccta 81528
>gb|AY876142.1| Cellulomonas fimi strain DSM 20113 CTP synthase gene, partial cds Length = 986 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 cgtcggcggcgccggcgacc 373 |||||||||||||||||||| Sbjct: 714 cgtcggcggcgccggcgacc 733
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 cggcgtcggcggcgccggcg 370 |||||||||||||||||||| Sbjct: 17485 cggcgtcggcggcgccggcg 17466 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,402,055 Number of Sequences: 3902068 Number of extensions: 3402055 Number of successful extensions: 249764 Number of sequences better than 10.0: 196 Number of HSP's better than 10.0 without gapping: 205 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 244300 Number of HSP's gapped (non-prelim): 5460 length of query: 382 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 360 effective length of database: 17,147,199,772 effective search space: 6172991917920 effective search space used: 6172991917920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
