| Clone Name | bast46d10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB032840.1| Hordeum vulgare HVA/68 mRNA for vacuolar proton-ATPase, complete cds Length = 2281 Score = 743 bits (375), Expect = 0.0 Identities = 378/379 (99%) Strand = Plus / Plus Query: 52 gctccgccgcgccgcgatcccgtctgacgccggcgaccccagcgcgccggacgccatggc 111 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gctccgccgcgccgcgatcccgtctgacgccggcgaccccagcgcgccggacgccatggc 60 Query: 112 gcacggcgaccgcatgaccaccttcgaggagagcgagcgcgagagcgagtacggctacgt 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcacggcgaccgcatgaccaccttcgaggagagcgagcgcgagagcgagtacggctacgt 120 Query: 172 ccgcaaggtctctggacccgtggtggtggccgatggcatgggcggtgccgccatgtacga 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgcaaggtctctggacccgtggtggtggccgatggcatgggcggtgccgccatgtacga 180 Query: 232 gctcgtccgtgtcggccacgacagcctcatcggcgaaatcatccgtctcgagggcgattc 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gctcgtccgtgtcggccacgacagcctcatcggcgaaatcatccgtctcgagggcgattc 240 Query: 292 agccacaatccaagttcacgaggaaacagctgggctaacggtcaatgatcccgtgttgag 351 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 agccacaatccaagtttacgaggaaacagctgggctaacggtcaatgatcccgtgttgag 300 Query: 352 aacaaaaaagcctctttcatgtgagttgggacctggtattcttggaaacatctttgatgg 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 aacaaaaaagcctctttcatgtgagttgggacctggtattcttggaaacatctttgatgg 360 Query: 412 gatccagcgtcctctgaaa 430 ||||||||||||||||||| Sbjct: 361 gatccagcgtcctctgaaa 379
>gb|DQ432014.1| Triticum aestivum vacuolar proton-ATPase subunit A mRNA, complete cds Length = 2358 Score = 561 bits (283), Expect = e-157 Identities = 334/351 (95%) Strand = Plus / Plus Query: 80 gccggcgaccccagcgcgccggacgccatggcgcacggcgaccgcatgaccaccttcgag 139 |||| |||||||| | |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 84 gccgacgaccccaccacgccggccgccatggcgcacggcgaccgcatgaccaccttcgag 143 Query: 140 gagagcgagcgcgagagcgagtacggctacgtccgcaaggtctctggacccgtggtggtg 199 ||| |||||||||||||||||||||||||||||||||||||||| || |||||||| ||| Sbjct: 144 gagggcgagcgcgagagcgagtacggctacgtccgcaaggtctccgggcccgtggttgtg 203 Query: 200 gccgatggcatgggcggtgccgccatgtacgagctcgtccgtgtcggccacgacagcctc 259 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 204 gccgatggcatgggcggggccgccatgtacgagctcgtccgtgtcggccacgacagcctc 263 Query: 260 atcggcgaaatcatccgtctcgagggcgattcagccacaatccaagttcacgaggaaaca 319 ||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||| Sbjct: 264 atcggcgaaatcatccgtctcgagggcgattcagctacaatccaagtttatgaggaaaca 323 Query: 320 gctgggctaacggtcaatgatcccgtgttgagaacaaaaaagcctctttcatgtgagttg 379 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 324 gctgggctaacggtcaacgatccagtgttgagaacaaaaaagcctctttcatgtgagttg 383 Query: 380 ggacctggtattcttggaaacatctttgatgggatccagcgtcctctgaaa 430 |||||||||||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 384 ggacctggtattcttggaaacatcttcgatggaatccagcgccctctgaaa 434
>gb|U36939.1|HVU36939 Hordeum vulgare vacuolar ATPase catalytic subunit mRNA, partial cds Length = 2089 Score = 385 bits (194), Expect = e-104 Identities = 200/202 (99%) Strand = Plus / Plus Query: 229 cgagctcgtccgtgtcggccacgacagcctcatcggcgaaatcatccgtctcgagggcga 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgagctcgtccgtgtcggccacgacagcctcatcggcgaaatcatccgtctcgagggcga 60 Query: 289 ttcagccacaatccaagttcacgaggaaacagctgggctaacggtcaatgatcccgtgtt 348 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ttcagccacaatccaagtttacgaggaaacagctgggctaacggtcaatgatcccgtgtt 120 Query: 349 gagaacaaaaaagcctctttcatgtgagttgggacctggtattcttggaaacatctttga 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gagaacaaaaaagcctctttcatgtgagttgggacctggtattcttggaaacatctttga 180 Query: 409 tgggatccagcgtcctctgaaa 430 ||||||| |||||||||||||| Sbjct: 181 tgggatctagcgtcctctgaaa 202
>gb|BT024092.1| Zea mays clone EL01N0551D01 mRNA sequence Length = 2273 Score = 260 bits (131), Expect = 3e-66 Identities = 275/323 (85%) Strand = Plus / Plus Query: 104 gccatggcgcacggcgaccgcatgaccaccttcgaggagagcgagcgcgagagcgagtac 163 ||||||||| ||||||||||| | |||||||||||||| |||| |||||||||||| Sbjct: 103 gccatggcgtacggcgaccgcgtcaccaccttcgaggactccgagaaggagagcgagtac 162 Query: 164 ggctacgtccgcaaggtctctggacccgtggtggtggccgatggcatgggcggtgccgcc 223 ||||| |||||||||||||||||||| ||||| ||||| ||||| ||||| ||||| ||| Sbjct: 163 ggctatgtccgcaaggtctctggacctgtggttgtggctgatggaatgggtggtgctgcc 222 Query: 224 atgtacgagctcgtccgtgtcggccacgacagcctcatcggcgaaatcatccgtctcgag 283 ||||| || || || |||||||| || || | |||||| || ||||| |||||||| ||| Sbjct: 223 atgtatgaacttgttcgtgtcggacatgataacctcattggggaaattatccgtcttgag 282 Query: 284 ggcgattcagccacaatccaagttcacgaggaaacagctgggctaacggtcaatgatccc 343 ||||||||||| |||||||||||| | |||||||| ||||| || | ||| ||||| || Sbjct: 283 ggcgattcagctacaatccaagtttatgaggaaaccgctggactgatggttaatgaccct 342 Query: 344 gtgttgagaacaaaaaagcctctttcatgtgagttgggacctggtattcttggaaacatc 403 || |||||||||| ||||||||||||| ||| ||||||||||| |||||||||||||| Sbjct: 343 gtattgagaacaagaaagcctctttcagttgaattgggacctggaattcttggaaacatt 402 Query: 404 tttgatgggatccagcgtcctct 426 ||||| || |||||||| ||||| Sbjct: 403 tttgacggtatccagcggcctct 425
>gb|AY104754.1| Zea mays PCO134411 mRNA sequence Length = 2254 Score = 260 bits (131), Expect = 3e-66 Identities = 275/323 (85%) Strand = Plus / Plus Query: 104 gccatggcgcacggcgaccgcatgaccaccttcgaggagagcgagcgcgagagcgagtac 163 ||||||||| ||||||||||| | |||||||||||||| ||| |||||||||||| Sbjct: 95 gccatggcgtacggcgaccgcgttaccaccttcgaggactcagagaaggagagcgagtac 154 Query: 164 ggctacgtccgcaaggtctctggacccgtggtggtggccgatggcatgggcggtgccgcc 223 ||||| |||||||||||||||||||| ||||| ||||| ||||| ||||| ||||| ||| Sbjct: 155 ggctatgtccgcaaggtctctggacctgtggttgtggctgatggaatgggtggtgctgcc 214 Query: 224 atgtacgagctcgtccgtgtcggccacgacagcctcatcggcgaaatcatccgtctcgag 283 ||||| || || || |||||||| || || | |||||| || ||||| |||||||| ||| Sbjct: 215 atgtatgaacttgttcgtgtcggacatgataacctcattggggaaattatccgtcttgag 274 Query: 284 ggcgattcagccacaatccaagttcacgaggaaacagctgggctaacggtcaatgatccc 343 ||||||||||| |||||||||||| | |||||||||||||| || | ||| ||||| || Sbjct: 275 ggcgattcagctacaatccaagtttatgaggaaacagctggactgatggttaatgaccct 334 Query: 344 gtgttgagaacaaaaaagcctctttcatgtgagttgggacctggtattcttggaaacatc 403 || |||||||||| ||||||||||||| ||| ||||||||||| |||||||||||||| Sbjct: 335 gtattgagaacaagaaagcctctttcagttgaattgggacctggaattcttggaaacatt 394 Query: 404 tttgatgggatccagcgtcctct 426 ||||| || |||||||| ||||| Sbjct: 395 tttgacggtatccagcgacctct 417
>dbj|AK071775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110H16, full insert sequence Length = 740 Score = 236 bits (119), Expect = 5e-59 Identities = 236/275 (85%) Strand = Plus / Plus Query: 152 gagagcgagtacggctacgtccgcaaggtctctggacccgtggtggtggccgatggcatg 211 ||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||| ||| Sbjct: 189 gagagcgagtacggctacgtccgcaaggtttctggacctgtggtcgtggctgatggaatg 248 Query: 212 ggcggtgccgccatgtacgagctcgtccgtgtcggccacgacagcctcatcggcgaaatc 271 || ||||| |||||||| || || ||||| || || | || | |||||| || ||||| Sbjct: 249 ggtggtgctgccatgtatgaacttgtccgagttggtaatgataacctcattggggaaatt 308 Query: 272 atccgtctcgagggcgattcagccacaatccaagttcacgaggaaacagctgggctaacg 331 || ||||| ||||| ||||||||||| || |||||| | ||||||||||||||| | | | Sbjct: 309 attcgtcttgagggtgattcagccaccattcaagtttatgaggaaacagctgggttgatg 368 Query: 332 gtcaatgatcccgtgttgagaacaaaaaagcctctttcatgtgagttgggacctggtatt 391 ||||||||||| ||||||||||||| ||||||||||||| ||| |||||||||||||| Sbjct: 369 gtcaatgatccagtgttgagaacaagaaagcctctttcagttgaattgggacctggtatc 428 Query: 392 cttggaaacatctttgatgggatccagcgtcctct 426 |||||||| ||||||||||| |||||||| ||||| Sbjct: 429 cttggaaatatctttgatggaatccagcgccctct 463
>dbj|AK069821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028L13, full insert sequence Length = 2315 Score = 236 bits (119), Expect = 5e-59 Identities = 236/275 (85%) Strand = Plus / Plus Query: 152 gagagcgagtacggctacgtccgcaaggtctctggacccgtggtggtggccgatggcatg 211 ||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||| ||| Sbjct: 191 gagagcgagtacggctacgtccgcaaggtttctggacctgtggtcgtggctgatggaatg 250 Query: 212 ggcggtgccgccatgtacgagctcgtccgtgtcggccacgacagcctcatcggcgaaatc 271 || ||||| |||||||| || || ||||| || || | || | |||||| || ||||| Sbjct: 251 ggtggtgctgccatgtatgaacttgtccgagttggtaatgataacctcattggggaaatt 310 Query: 272 atccgtctcgagggcgattcagccacaatccaagttcacgaggaaacagctgggctaacg 331 || ||||| ||||| ||||||||||| || |||||| | ||||||||||||||| | | | Sbjct: 311 attcgtcttgagggtgattcagccaccattcaagtttatgaggaaacagctgggttgatg 370 Query: 332 gtcaatgatcccgtgttgagaacaaaaaagcctctttcatgtgagttgggacctggtatt 391 ||||||||||| ||||||||||||| ||||||||||||| ||| |||||||||||||| Sbjct: 371 gtcaatgatccagtgttgagaacaagaaagcctctttcagttgaattgggacctggtatc 430 Query: 392 cttggaaacatctttgatgggatccagcgtcctct 426 |||||||| ||||||||||| |||||||| ||||| Sbjct: 431 cttggaaatatctttgatggaatccagcgccctct 465
>dbj|AK067063.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089J10, full insert sequence Length = 2295 Score = 236 bits (119), Expect = 5e-59 Identities = 275/327 (84%) Strand = Plus / Plus Query: 104 gccatggcgcacggcgaccgcatgaccaccttcgaggagagcgagcgcgagagcgagtac 163 ||||||||| |||||||||||| |||||||||||||| |||| |||||||||||| Sbjct: 97 gccatggcgttcggcgaccgcatcaccaccttcgaggactccgagaaggagagcgagtac 156 Query: 164 ggctacgtccgcaaggtctctggacccgtggtggtggccgatggcatgggcggtgccgcc 223 |||||||||||||||||||||||||| ||||| ||||| ||||| ||||| ||||| ||| Sbjct: 157 ggctacgtccgcaaggtctctggacctgtggttgtggctgatggaatgggaggtgctgcc 216 Query: 224 atgtacgagctcgtccgtgtcggccacgacagcctcatcggcgaaatcatccgtctcgag 283 ||||| || ||||||||||| || ||||| | || || || ||||| || ||||| ||| Sbjct: 217 atgtatgaactcgtccgtgttgggcacgataatcttattggagaaattattcgtcttgag 276 Query: 284 ggcgattcagccacaatccaagttcacgaggaaacagctgggctaacggtcaatgatccc 343 || |||||||| ||||| |||||| | |||||||| ||||| || | ||| || || || Sbjct: 277 ggggattcagctacaattcaagtttatgaggaaactgctggactgatggttaacgaccct 336 Query: 344 gtgttgagaacaaaaaagcctctttcatgtgagttgggacctggtattcttggaaacatc 403 || ||||||||| |||||| || || |||||||||||||||||||||||| ||||| Sbjct: 337 gttttgagaacacgaaagcccctgtcggttgagttgggacctggtattcttgggaacatt 396 Query: 404 tttgatgggatccagcgtcctctgaaa 430 ||||||||||||||||| ||||||||| Sbjct: 397 tttgatgggatccagcgccctctgaaa 423
>gb|U36436.1|ZMU36436 Zea mays vacuolar ATPase 69 kDa subunit mRNA, partial cds Length = 2000 Score = 117 bits (59), Expect = 3e-23 Identities = 113/131 (86%) Strand = Plus / Plus Query: 296 acaatccaagttcacgaggaaacagctgggctaacggtcaatgatcccgtgttgagaaca 355 |||||||||||| | |||||||||||||| || | ||| ||||| || || ||||||||| Sbjct: 10 acaatccaagtttatgaggaaacagctggactgatggttaatgaccctgtattgagaaca 69 Query: 356 aaaaagcctctttcatgtgagttgggacctggtattcttggaaacatctttgatgggatc 415 | ||||||||||||| ||| ||||||||||| |||||||||||||| ||||| || ||| Sbjct: 70 agaaagcctctttcagttgaattgggacctggaattcttggaaacatttttgacggtatc 129 Query: 416 cagcgtcctct 426 ||||| ||||| Sbjct: 130 cagcgacctct 140
>dbj|AB189963.1| Pyrus communis PcVHA-A1 mRNA for vacuolar H+-ATPase catalytic subunit, complete cds Length = 2236 Score = 89.7 bits (45), Expect = 7e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 152 gagagcgagtacggctacgtccgcaaggtctctggacccgtggtggtggccgatggcatg 211 ||||||||||| |||||||||||||||||||||||||| || ||||| |||||||||||| Sbjct: 121 gagagcgagtatggctacgtccgcaaggtctctggaccagtcgtggttgccgatggcatg 180 Query: 212 g 212 | Sbjct: 181 g 181 Score = 46.1 bits (23), Expect = 0.095 Identities = 35/39 (89%) Strand = Plus / Plus Query: 287 gattcagccacaatccaagttcacgaggaaacagctggg 325 ||||| |||||||| |||||| | ||||||||||||||| Sbjct: 256 gattctgccacaatacaagtttatgaggaaacagctggg 294
>gb|U15604.1|BNU15604 Brassica napus tonoplast ATPase 70 kDa subunit mRNA, complete cds Length = 2201 Score = 85.7 bits (43), Expect = 1e-13 Identities = 154/191 (80%) Strand = Plus / Plus Query: 152 gagagcgagtacggctacgtccgcaaggtctctggacccgtggtggtggccgatggcatg 211 ||||||||||| || ||||| |||||||| || || ||||| || ||||| ||||| ||| Sbjct: 94 gagagcgagtatggttacgttcgcaaggtttcagggcccgtcgttgtggctgatggtatg 153 Query: 212 ggcggtgccgccatgtacgagctcgtccgtgtcggccacgacagcctcatcggcgaaatc 271 | ||||| || ||||| ||| | |||||||| || || || | || || || |||||| Sbjct: 154 gcaggtgctgctatgtatgagttagtccgtgttgggcatgataatctgattggagaaatc 213 Query: 272 atccgtctcgagggcgattcagccacaatccaagttcacgaggaaacagctgggctaacg 331 |||||||| || || ||||| ||||| |||||||| ||||||| |||||||| || ||| Sbjct: 214 atccgtcttgaaggagattccgccaccatccaagtgtacgaggagacagctggactgacg 273 Query: 332 gtcaatgatcc 342 || |||||||| Sbjct: 274 gttaatgatcc 284
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 83.8 bits (42), Expect = 4e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 104 gccatggcgcacggcgaccgcatgaccaccttcgaggagagcgagcgcgagagcgagtac 163 ||||||||| |||||||||||| |||||||||||||| |||| |||||||||||| Sbjct: 4120265 gccatggcgttcggcgaccgcatcaccaccttcgaggactccgagaaggagagcgagtac 4120324 Query: 164 ggctacgtccgcaaggtc 181 |||||||||||||||||| Sbjct: 4120325 ggctacgtccgcaaggtc 4120342 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 177 aggtctctggacccgtggtggtggccgatggcatgggcggtgccgccatgtacgagctcg 236 ||||||||||||| ||||| ||||| ||||| ||||| ||||| |||||||| || |||| Sbjct: 4121460 aggtctctggacctgtggttgtggctgatggaatgggaggtgctgccatgtatgaactcg 4121519 Query: 237 tccgtgtcggccacgacagcctcatcggcgaaatcatccgtctcgagggcgattcagcca 296 ||||||| || ||||| | || || || ||||| || ||||| ||||| |||||||| | Sbjct: 4121520 tccgtgttgggcacgataatcttattggagaaattattcgtcttgagggggattcagcta 4121579 Query: 297 caatccaag 305 |||| |||| Sbjct: 4121580 caattcaag 4121588 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 373 tgagttgggacctggtattcttggaaacatctttgatgggatccag 418 |||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 4121867 tgagttgggacctggtattcttgggaacatttttgatgggatccag 4121912
>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_E05 Length = 116305 Score = 83.8 bits (42), Expect = 4e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 104 gccatggcgcacggcgaccgcatgaccaccttcgaggagagcgagcgcgagagcgagtac 163 ||||||||| |||||||||||| |||||||||||||| |||| |||||||||||| Sbjct: 30279 gccatggcgttcggcgaccgcatcaccaccttcgaggactccgagaaggagagcgagtac 30338 Query: 164 ggctacgtccgcaaggtc 181 |||||||||||||||||| Sbjct: 30339 ggctacgtccgcaaggtc 30356 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 177 aggtctctggacccgtggtggtggccgatggcatgggcggtgccgccatgtacgagctcg 236 ||||||||||||| ||||| ||||| ||||| ||||| ||||| |||||||| || |||| Sbjct: 31474 aggtctctggacctgtggttgtggctgatggaatgggaggtgctgccatgtatgaactcg 31533 Query: 237 tccgtgtcggccacgacagcctcatcggcgaaatcatccgtctcgagggcgattcagcca 296 ||||||| || ||||| | || || || ||||| || ||||| ||||| |||||||| | Sbjct: 31534 tccgtgttgggcacgataatcttattggagaaattattcgtcttgagggggattcagcta 31593 Query: 297 caatccaag 305 |||| |||| Sbjct: 31594 caattcaag 31602 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 373 tgagttgggacctggtattcttggaaacatctttgatgggatccag 418 |||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 31881 tgagttgggacctggtattcttgggaacatttttgatgggatccag 31926
>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A21 Length = 170051 Score = 83.8 bits (42), Expect = 4e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 104 gccatggcgcacggcgaccgcatgaccaccttcgaggagagcgagcgcgagagcgagtac 163 ||||||||| |||||||||||| |||||||||||||| |||| |||||||||||| Sbjct: 166931 gccatggcgttcggcgaccgcatcaccaccttcgaggactccgagaaggagagcgagtac 166990 Query: 164 ggctacgtccgcaaggtc 181 |||||||||||||||||| Sbjct: 166991 ggctacgtccgcaaggtc 167008 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 177 aggtctctggacccgtggtggtggccgatggcatgggcggtgccgccatgtacgagctcg 236 ||||||||||||| ||||| ||||| ||||| ||||| ||||| |||||||| || |||| Sbjct: 168126 aggtctctggacctgtggttgtggctgatggaatgggaggtgctgccatgtatgaactcg 168185 Query: 237 tccgtgtcggccacgacagcctcatcggcgaaatcatccgtctcgagggcgattcagcca 296 ||||||| || ||||| | || || || ||||| || ||||| ||||| |||||||| | Sbjct: 168186 tccgtgttgggcacgataatcttattggagaaattattcgtcttgagggggattcagcta 168245 Query: 297 caatccaag 305 |||| |||| Sbjct: 168246 caattcaag 168254 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 373 tgagttgggacctggtattcttggaaacatctttgatgggatccag 418 |||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 168533 tgagttgggacctggtattcttgggaacatttttgatgggatccag 168578
>gb|AF367445.1| Prunus persica clone AtpvA1 V-ATPase catalytic subunit A (atpvA1) mRNA, complete cds Length = 2336 Score = 75.8 bits (38), Expect = 1e-10 Identities = 140/174 (80%) Strand = Plus / Plus Query: 152 gagagcgagtacggctacgtccgcaaggtctctggacccgtggtggtggccgatggcatg 211 ||||||||||| |||||||||||||||||||| ||||| || || || || ||||||||| Sbjct: 188 gagagcgagtatggctacgtccgcaaggtctcaggaccagtcgtcgtcgcagatggcatg 247 Query: 212 ggcggtgccgccatgtacgagctcgtccgtgtcggccacgacagcctcatcggcgaaatc 271 | || || || ||||||||||| || ||||| || || || | | || || ||||| Sbjct: 248 gctggagctgctatgtacgagctggttcgtgttggacatgataatttgattggtgaaatt 307 Query: 272 atccgtctcgagggcgattcagccacaatccaagttcacgaggaaacagctggg 325 || || | || || ||||| ||||||||||||||| | ||||||||||||||| Sbjct: 308 attcggttagaaggagattctgccacaatccaagtttatgaggaaacagctggg 361
>gb|J03769.1|DARVHATPA Daucus carota 70kD vacuolar H+-ATPase mRNA, complete cds Length = 2397 Score = 73.8 bits (37), Expect = 4e-10 Identities = 207/261 (79%), Gaps = 2/261 (0%) Strand = Plus / Plus Query: 152 gagagcgagtacggctacgtccgcaaggtctctggacccgtggtggtggccgatggcatg 211 ||||||||||| || |||||||| ||||| || ||||| || || || |||||||| ||| Sbjct: 205 gagagcgagtatggttacgtccgtaaggtatccggaccagttgttgtcgccgatggaatg 264 Query: 212 ggcggtgccgccatgtacgagctcgtccgtgtcggccacgacagcctcatcggcgaaatc 271 || ||||| || ||||| || || || ||||| || || |||| || || || ||||| Sbjct: 265 ggaggtgcggctatgtatgaacttgttcgtgttggacatgacaatcttattggagaaatt 324 Query: 272 atccgtctcgagggcgattcagccacaatccaagttcacgaggaaacagctgggctaacg 331 || ||| | || || ||||| || |||||||||||| |||| |||||||||||| | | | Sbjct: 325 attcgtttggaaggagattctgctacaatccaagtttacgaagaaacagctgggttgatg 384 Query: 332 gtcaatgatcccgtgttgagaacaaaaaagcctctttcatgt-gagttgggacctggtat 390 || |||||||| || | || ||| | ||||| || || ||| |||||||| ||||| || Sbjct: 385 gtgaatgatcctgtccttaggacacacaagcccctatc-tgtggagttgggtcctggaat 443 Query: 391 tcttggaaacatctttgatgg 411 ||| ||||| ||||||||||| Sbjct: 444 tctgggaaatatctttgatgg 464
>ref|NM_001036222.1| Arabidopsis thaliana VHA-A; ATP binding / hydrogen-transporting ATP synthase, rotational mechanism / hydrogen-transporting ATPase, rotational mechan> AT1G78900 (VHA-A) transcript variant AT1G78900.2 mRNA, complete cds Length = 2512 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 266 gaaatcatccgtctcgagggcgattcagccacaatccaagttcacgaggaaacagctggg 325 |||||||||||||| || || ||||| ||||| ||||||||| |||||||||||||||| Sbjct: 431 gaaatcatccgtcttgaaggagattctgccaccatccaagtttacgaggaaacagctgga 490 Query: 326 ctaacggtcaatgatcccgt 345 | || || ||||||||||| Sbjct: 491 ttgacagttaatgatcccgt 510
>ref|NM_106539.3| Arabidopsis thaliana VHA-A; ATP binding / hydrogen-transporting ATP synthase, rotational mechanism / hydrogen-transporting ATPase, rotational mechan> AT1G78900 (VHA-A) transcript variant AT1G78900.1 mRNA, complete cds Length = 2373 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 266 gaaatcatccgtctcgagggcgattcagccacaatccaagttcacgaggaaacagctggg 325 |||||||||||||| || || ||||| ||||| ||||||||| |||||||||||||||| Sbjct: 292 gaaatcatccgtcttgaaggagattctgccaccatccaagtttacgaggaaacagctgga 351 Query: 326 ctaacggtcaatgatcccgt 345 | || || ||||||||||| Sbjct: 352 ttgacagttaatgatcccgt 371
>gb|BT008383.1| Arabidopsis thaliana At1g78900 gene, complete cds Length = 1872 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 266 gaaatcatccgtctcgagggcgattcagccacaatccaagttcacgaggaaacagctggg 325 |||||||||||||| || || ||||| ||||| ||||||||| |||||||||||||||| Sbjct: 166 gaaatcatccgtcttgaaggagattctgccaccatccaagtttacgaggaaacagctgga 225 Query: 326 ctaacggtcaatgatcccgt 345 | || || ||||||||||| Sbjct: 226 ttgacagttaatgatcccgt 245
>gb|AY081296.1| Arabidopsis thaliana ATPase subunit A mRNA, complete cds Length = 2314 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 266 gaaatcatccgtctcgagggcgattcagccacaatccaagttcacgaggaaacagctggg 325 |||||||||||||| || || ||||| ||||| ||||||||| |||||||||||||||| Sbjct: 291 gaaatcatccgtcttgaaggagattctgccaccatccaagtttacgaggaaacagctgga 350 Query: 326 ctaacggtcaatgatcccgt 345 | || || ||||||||||| Sbjct: 351 ttgacagttaatgatcccgt 370
>gb|AY059909.1| Arabidopsis thaliana vacuolar type ATPase subunit A (F9K20.5) mRNA, complete cds Length = 2248 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 266 gaaatcatccgtctcgagggcgattcagccacaatccaagttcacgaggaaacagctggg 325 |||||||||||||| || || ||||| ||||| ||||||||| |||||||||||||||| Sbjct: 291 gaaatcatccgtcttgaaggagattctgccaccatccaagtttacgaggaaacagctgga 350 Query: 326 ctaacggtcaatgatcccgt 345 | || || ||||||||||| Sbjct: 351 ttgacagttaatgatcccgt 370
>emb|BX817720.1|CNS0AALL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL38ZG04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2261 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 266 gaaatcatccgtctcgagggcgattcagccacaatccaagttcacgaggaaacagctggg 325 |||||||||||||| || || ||||| ||||| ||||||||| |||||||||||||||| Sbjct: 272 gaaatcatccgtcttgaaggagattctgccaccatccaagtttacgaggaaacagctgga 331 Query: 326 ctaacggtcaatgatcccgt 345 | || || ||||||||||| Sbjct: 332 ttgacagttaatgatcccgt 351
>gb|AY085759.1| Arabidopsis thaliana clone 17815 mRNA, complete sequence Length = 2314 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 266 gaaatcatccgtctcgagggcgattcagccacaatccaagttcacgaggaaacagctggg 325 |||||||||||||| || || ||||| ||||| ||||||||| |||||||||||||||| Sbjct: 291 gaaatcatccgtcttgaaggagattctgccaccatccaagtttacgaggaaacagctgga 350 Query: 326 ctaacggtcaatgatcccgt 345 | || || ||||||||||| Sbjct: 351 ttgacagttaatgatcccgt 370
>gb|BT002589.1| Arabidopsis thaliana vacuolar type ATPase subunit A (At1g78900) mRNA, complete cds Length = 1927 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 266 gaaatcatccgtctcgagggcgattcagccacaatccaagttcacgaggaaacagctggg 325 |||||||||||||| || || ||||| ||||| ||||||||| |||||||||||||||| Sbjct: 166 gaaatcatccgtcttgaaggagattctgccaccatccaagtttacgaggaaacagctgga 225 Query: 326 ctaacggtcaatgatcccgt 345 | || || ||||||||||| Sbjct: 226 ttgacagttaatgatcccgt 245
>gb|U65638.1|ATU65638 Arabidopsis thaliana vacuolar type ATPase subunit A mRNA, complete cds Length = 2283 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 266 gaaatcatccgtctcgagggcgattcagccacaatccaagttcacgaggaaacagctggg 325 |||||||||||||| || || ||||| ||||| ||||||||| |||||||||||||||| Sbjct: 194 gaaatcatccgtcttgaaggagattctgccaccatccaagtttacgaggaaacagctgga 253 Query: 326 ctaacggtcaatgatcccgt 345 | || || ||||||||||| Sbjct: 254 ttgacagttaatgatcccgt 273
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 360 agcctctttcatgtgagttgggacctggtattcttggaaacatctttgatgggatccag 418 ||||||||||| ||| |||||||||||||| |||||||| ||||||||||| |||||| Sbjct: 26908030 agcctctttcagttgaattgggacctggtatccttggaaatatctttgatggaatccag 26907972 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 311 gaggaaacagctgggctaacggtcaatgatcccgtgttgagaacaaaaaag 361 ||||||||||||||| | | |||||||||||| ||||||||||||| |||| Sbjct: 26908172 gaggaaacagctgggttgatggtcaatgatccagtgttgagaacaagaaag 26908122 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 152 gagagcgagtacggctacgtccgcaaggt 180 ||||||||||||||||||||||||||||| Sbjct: 26909007 gagagcgagtacggctacgtccgcaaggt 26908979 Score = 58.0 bits (29), Expect = 3e-05 Identities = 98/121 (80%) Strand = Plus / Minus Query: 177 aggtctctggacccgtggtggtggccgatggcatgggcggtgccgccatgtacgagctcg 236 |||| |||||||| ||||| ||||| ||||| ||||| ||||| |||||||| || || | Sbjct: 26908411 aggtttctggacctgtggtcgtggctgatggaatgggtggtgctgccatgtatgaacttg 26908352 Query: 237 tccgtgtcggccacgacagcctcatcggcgaaatcatccgtctcgagggcgattcagcca 296 |||| || || | || | |||||| || ||||| || ||||| ||||| |||||||||| Sbjct: 26908351 tccgagttggtaatgataacctcattggggaaattattcgtcttgagggtgattcagcca 26908292 Query: 297 c 297 | Sbjct: 26908291 c 26908291 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 gtgttgagaacaaaaaagcctctt 367 |||||||||| ||||||||||||| Sbjct: 21892517 gtgttgagaaaaaaaaagcctctt 21892494
>dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0065C04 Length = 165270 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 360 agcctctttcatgtgagttgggacctggtattcttggaaacatctttgatgggatccag 418 ||||||||||| ||| |||||||||||||| |||||||| ||||||||||| |||||| Sbjct: 31791 agcctctttcagttgaattgggacctggtatccttggaaatatctttgatggaatccag 31733 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 311 gaggaaacagctgggctaacggtcaatgatcccgtgttgagaacaaaaaag 361 ||||||||||||||| | | |||||||||||| ||||||||||||| |||| Sbjct: 31933 gaggaaacagctgggttgatggtcaatgatccagtgttgagaacaagaaag 31883 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 152 gagagcgagtacggctacgtccgcaaggt 180 ||||||||||||||||||||||||||||| Sbjct: 32768 gagagcgagtacggctacgtccgcaaggt 32740 Score = 58.0 bits (29), Expect = 3e-05 Identities = 98/121 (80%) Strand = Plus / Minus Query: 177 aggtctctggacccgtggtggtggccgatggcatgggcggtgccgccatgtacgagctcg 236 |||| |||||||| ||||| ||||| ||||| ||||| ||||| |||||||| || || | Sbjct: 32172 aggtttctggacctgtggtcgtggctgatggaatgggtggtgctgccatgtatgaacttg 32113 Query: 237 tccgtgtcggccacgacagcctcatcggcgaaatcatccgtctcgagggcgattcagcca 296 |||| || || | || | |||||| || ||||| || ||||| ||||| |||||||||| Sbjct: 32112 tccgagttggtaatgataacctcattggggaaattattcgtcttgagggtgattcagcca 32053 Query: 297 c 297 | Sbjct: 32052 c 32052
>dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0051O02 Length = 169532 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 360 agcctctttcatgtgagttgggacctggtattcttggaaacatctttgatgggatccag 418 ||||||||||| ||| |||||||||||||| |||||||| ||||||||||| |||||| Sbjct: 162656 agcctctttcagttgaattgggacctggtatccttggaaatatctttgatggaatccag 162598 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 311 gaggaaacagctgggctaacggtcaatgatcccgtgttgagaacaaaaaag 361 ||||||||||||||| | | |||||||||||| ||||||||||||| |||| Sbjct: 162798 gaggaaacagctgggttgatggtcaatgatccagtgttgagaacaagaaag 162748 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 152 gagagcgagtacggctacgtccgcaaggt 180 ||||||||||||||||||||||||||||| Sbjct: 163633 gagagcgagtacggctacgtccgcaaggt 163605 Score = 58.0 bits (29), Expect = 3e-05 Identities = 98/121 (80%) Strand = Plus / Minus Query: 177 aggtctctggacccgtggtggtggccgatggcatgggcggtgccgccatgtacgagctcg 236 |||| |||||||| ||||| ||||| ||||| ||||| ||||| |||||||| || || | Sbjct: 163037 aggtttctggacctgtggtcgtggctgatggaatgggtggtgctgccatgtatgaacttg 162978 Query: 237 tccgtgtcggccacgacagcctcatcggcgaaatcatccgtctcgagggcgattcagcca 296 |||| || || | || | |||||| || ||||| || ||||| ||||| |||||||||| Sbjct: 162977 tccgagttggtaatgataacctcattggggaaattattcgtcttgagggtgattcagcca 162918 Query: 297 c 297 | Sbjct: 162917 c 162917
>dbj|AB189964.1| Pyrus communis PcVHA-A2 mRNA for vacuolar H+-ATPase catalytic subunit, complete cds Length = 2322 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 152 gagagcgagtacggctacgtccgcaaggtctctggacccgtggtggtggccgatggcatg 211 ||||| ||||| ||||||||||| |||||||||||||| || ||||| || ||||||||| Sbjct: 206 gagagtgagtatggctacgtccggaaggtctctggaccagtcgtggttgctgatggcatg 265 Query: 212 g 212 | Sbjct: 266 g 266 Score = 46.1 bits (23), Expect = 0.095 Identities = 35/39 (89%) Strand = Plus / Plus Query: 287 gattcagccacaatccaagttcacgaggaaacagctggg 325 ||||| |||||||| |||||| | ||||||||||||||| Sbjct: 341 gattctgccacaattcaagtttatgaggaaacagctggg 379
>gb|BT014583.1| Lycopersicon esculentum clone 134040F, mRNA sequence Length = 2415 Score = 61.9 bits (31), Expect = 2e-06 Identities = 214/275 (77%) Strand = Plus / Plus Query: 155 agcgagtacggctacgtccgcaaggtctctggacccgtggtggtggccgatggcatgggc 214 |||||||| || |||||| | ||||| |||||||| |||| || || ||||| ||||| Sbjct: 168 agcgagtatggatacgtcagaaaggtgtctggaccagtggctgttgctgatggaatggga 227 Query: 215 ggtgccgccatgtacgagctcgtccgtgtcggccacgacagcctcatcggcgaaatcatc 274 || || |||||||| || || ||||||||||| || |||| |||||| || ||||| || Sbjct: 228 ggagctgccatgtatgaactagtccgtgtcggacatgacaacctcattggtgaaattatt 287 Query: 275 cgtctcgagggcgattcagccacaatccaagttcacgaggaaacagctgggctaacggtc 334 | || || || ||||| || ||||| || ||| | || ||||||||||| || | ||| Sbjct: 288 aggctggaaggagattccgctacaattcaggtttatgaagaaacagctggtctgatggtg 347 Query: 335 aatgatcccgtgttgagaacaaaaaagcctctttcatgtgagttgggacctggtattctt 394 ||||| |||||||| | ||| | ||||| || ||| ||| |||||||||| ||| | Sbjct: 348 aatgaccccgtgttacgtacacacaagcccctgtcagtagagctgggacctggaattttg 407 Query: 395 ggaaacatctttgatgggatccagcgtcctctgaa 429 || |||||||| ||||| || ||| | |||||||| Sbjct: 408 gggaacatcttcgatggtattcagaggcctctgaa 442
>gb|AY177247.1| Lycopersicon esculentum vacuolar H+-ATPase A1 subunit isoform mRNA, complete cds Length = 2370 Score = 61.9 bits (31), Expect = 2e-06 Identities = 214/275 (77%) Strand = Plus / Plus Query: 155 agcgagtacggctacgtccgcaaggtctctggacccgtggtggtggccgatggcatgggc 214 |||||||| || ||| || | ||||| |||||||| ||||| || || ||||| ||||| Sbjct: 129 agcgagtatggatacctcagaaaggtgtctggaccagtggttgttgctgatggaatggga 188 Query: 215 ggtgccgccatgtacgagctcgtccgtgtcggccacgacagcctcatcggcgaaatcatc 274 || || |||||||| || || ||||||||||| || |||| |||||| || ||||| || Sbjct: 189 ggagctgccatgtatgaactagtccgtgtcggacatgacaacctcattggtgaaattatt 248 Query: 275 cgtctcgagggcgattcagccacaatccaagttcacgaggaaacagctgggctaacggtc 334 | || || || ||||| || ||||| || ||| | || ||||||||||| || | ||| Sbjct: 249 aggctggaaggagattccgctacaattcaggtttatgaagaaacagctggtctgatggtg 308 Query: 335 aatgatcccgtgttgagaacaaaaaagcctctttcatgtgagttgggacctggtattctt 394 ||||| |||||||| | ||| | ||||| || ||| ||| |||||||||| ||| | Sbjct: 309 aatgaccccgtgttacgtacacacaagcccctgtcagtagagctgggacctggaattttg 368 Query: 395 ggaaacatctttgatgggatccagcgtcctctgaa 429 || |||||||| ||||| || ||| | |||||||| Sbjct: 369 gggaacatcttcgatggtattcagaggcctctgaa 403
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 193 ggtggtggccgatggcatgggcgg 216 |||||||||||||||||||||||| Sbjct: 1915762 ggtggtggccgatggcatgggcgg 1915785
>gb|U96487.1|DSU96487 Desulfurococcus sp. SY V-ATPase proteolipid gene, partial cds, and V-ATPase E, C, G, A, and D subunit genes, complete cds Length = 8391 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 257 ctcatcggcgaaatcatccgtctcgagggcga 288 |||||||| ||||||||||||||||| ||||| Sbjct: 2543 ctcatcggagaaatcatccgtctcgaaggcga 2574
>dbj|AB066243.1| Fundulus heteroclitus mRNA for V-ATPase subunit A, complete cds Length = 2573 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 221 gccatgtacgagctcgtccgtgtcggccac 250 |||||||||||||| || |||||||||||| Sbjct: 234 gccatgtacgagctggttcgtgtcggccac 263
>gb|BC044025.1| Xenopus laevis ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A, isoform 1, mRNA (cDNA clone MGC:54007 IMAGE:5571458), complete cds Length = 2383 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 398 aacatctttgatgggatccagcgtcctctgaaa 430 ||||||||||||||||| ||||| || |||||| Sbjct: 341 aacatctttgatgggattcagcgccccctgaaa 373
>ref|XM_793085.1| PREDICTED: Strongylocentrotus purpuratus similar to ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A (LOC593614), mRNA Length = 1530 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 398 aacatctttgatgggatccagcgtcctct 426 ||||||||||| |||||||| |||||||| Sbjct: 265 aacatctttgacgggatccaacgtcctct 293
>ref|XM_788794.1| PREDICTED: Strongylocentrotus purpuratus similar to ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A (LOC589143), partial mRNA Length = 215 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 398 aacatctttgatgggatccagcgtcctct 426 ||||||||||| |||||||| |||||||| Sbjct: 78 aacatctttgacgggatccaacgtcctct 106
>gb|AF050673.1|AF050673 Gossypium hirsutum vacuolar H+-ATPase catalytic subunit mRNA, complete cds Length = 2378 Score = 42.1 bits (21), Expect = 1.5 Identities = 72/89 (80%) Strand = Plus / Plus Query: 296 acaatccaagttcacgaggaaacagctgggctaacggtcaatgatcccgtgttgagaaca 355 |||||||||||| |||| ||||| ||||| || | ||| |||||||| || || | ||| Sbjct: 417 acaatccaagtttacgaagaaacggctggtctgatggtgaatgatccagttctgcggaca 476 Query: 356 aaaaagcctctttcatgtgagttgggacc 384 | |||||||| ||| |||||||||||| Sbjct: 477 cacaagcctctgtcagttgagttgggacc 505
>emb|AL807745.7| Mouse DNA sequence from clone RP23-20E10 on chromosome 4, complete sequence Length = 218691 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 agaacaaaaaagcctctttca 370 ||||||||||||||||||||| Sbjct: 117223 agaacaaaaaagcctctttca 117203
>gb|J05429.1|DARATPASE Carrot V-type H+-ATPase gene Length = 1829 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 152 gagagcgagtacggctacgtccgcaaggt 180 |||||||||||||| |||||||| ||||| Sbjct: 869 gagagcgagtacggttacgtccgtaaggt 897
>ref|XM_531454.1| PREDICTED: Pan troglodytes holocarboxylase synthetase (LOC473989), mRNA Length = 2319 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 gccggcgaccccagcgcgcc 99 |||||||||||||||||||| Sbjct: 53 gccggcgaccccagcgcgcc 34
>ref|XM_615447.2| PREDICTED: Bos taurus similar to Amyotrophic lateral sclerosis 2 chromosome region candidate gene protein 19 (Partitioning-defective 3-like protein) (PAR3-L protein) (PAR3-beta) (LOC535378), mRNA Length = 1926 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 caatgatcccgtgttgagaacaaa 357 |||||||| ||||||||||||||| Sbjct: 411 caatgatcacgtgttgagaacaaa 434
>gb|AF099924.2| Caenorhabditis elegans cosmid K07A9, complete sequence Length = 33460 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 355 aaaaaagcctctttcatgtgagtt 378 |||||||| ||||||||||||||| Sbjct: 22401 aaaaaagcgtctttcatgtgagtt 22424
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gtggccgatggcatgggcgg 216 |||||||||||||||||||| Sbjct: 2786340 gtggccgatggcatgggcgg 2786359
>gb|AC122352.4| Mus musculus BAC clone RP23-389C11 from chromosome 16, complete sequence Length = 196519 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 tcagccacaatccaagttca 309 |||||||||||||||||||| Sbjct: 189926 tcagccacaatccaagttca 189907
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ggtggtggccgatggcatgg 212 |||||||||||||||||||| Sbjct: 3787217 ggtggtggccgatggcatgg 3787236
>emb|CR396593.6| Zebrafish DNA sequence from clone CH211-194G1 in linkage group 5, complete sequence Length = 197143 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 tccaagttcacgaggaaaca 319 |||||||||||||||||||| Sbjct: 8865 tccaagttcacgaggaaaca 8884
>gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170988 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gagcgagcgcgagagcgagt 161 |||||||||||||||||||| Sbjct: 58937 gagcgagcgcgagagcgagt 58918
>ref|XM_623528.1| PREDICTED: Apis mellifera similar to Vacuolar ATP synthase catalytic subunit A, osteoclast isoform (V-ATPase A subunit 2) (Vacuolar proton pump alpha subunit 2) (V-ATPase 69 kDa subunit 2) (Isoform HO68) (LOC551093), mRNA Length = 2590 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 380 ggacctggtattcttggaaacatctttgatgg 411 ||||||||||||||||| | ||||||||||| Sbjct: 724 ggacctggtattcttggcagtatctttgatgg 755
>ref|XM_623492.1| PREDICTED: Apis mellifera similar to Vacuolar ATP synthase catalytic subunit A, osteoclast isoform (V-ATPase A subunit 2) (Vacuolar proton pump alpha subunit 2) (V-ATPase 69 kDa subunit 2) (Isoform HO68) (LOC551093), mRNA Length = 2256 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 380 ggacctggtattcttggaaacatctttgatgg 411 ||||||||||||||||| | ||||||||||| Sbjct: 390 ggacctggtattcttggcagtatctttgatgg 421
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ctccccgctccgccgcgccg 65 |||||||||||||||||||| Sbjct: 13965864 ctccccgctccgccgcgccg 13965883
>gb|AC154430.3| Mus musculus BAC clone RP24-208K8 from chromosome 16, complete sequence Length = 178222 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 tcagccacaatccaagttca 309 |||||||||||||||||||| Sbjct: 36646 tcagccacaatccaagttca 36627
>gb|AC154787.2| Mus musculus BAC clone RP24-468J5 from chromosome 17, complete sequence Length = 217844 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 atgggatccagcgtcctctg 427 |||||||||||||||||||| Sbjct: 63531 atgggatccagcgtcctctg 63512
>dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0006A22 Length = 190690 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 gtgttgagaacaaaaaagcctctt 367 |||||||||| ||||||||||||| Sbjct: 115002 gtgttgagaaaaaaaaagcctctt 114979
>dbj|AP005421.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0435D08 Length = 148912 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ctccccgctccgccgcgccg 65 |||||||||||||||||||| Sbjct: 119541 ctccccgctccgccgcgccg 119560
>dbj|AP005321.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0650H04 Length = 134533 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ctccccgctccgccgcgccg 65 |||||||||||||||||||| Sbjct: 68338 ctccccgctccgccgcgccg 68357
>dbj|BS000119.1| Pan troglodytes chromosome 22 clone:RP43-001G01, map 22, complete sequences Length = 101525 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gccggcgaccccagcgcgcc 99 |||||||||||||||||||| Sbjct: 47721 gccggcgaccccagcgcgcc 47740
>dbj|AB063285.1| Homo sapiens HLCS gene for holocarboxylase synthetase, complete cds Length = 250000 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 gccggcgaccccagcgcgcc 99 |||||||||||||||||||| Sbjct: 28599 gccggcgaccccagcgcgcc 28580
>dbj|AK106327.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-F03, full insert sequence Length = 1505 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ctccccgctccgccgcgccg 65 |||||||||||||||||||| Sbjct: 888 ctccccgctccgccgcgccg 869
>dbj|AK062784.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-B06, full insert sequence Length = 498 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ctccccgctccgccgcgccg 65 |||||||||||||||||||| Sbjct: 213 ctccccgctccgccgcgccg 232
>gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44 of 83 of the complete sequence Length = 265524 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gagcgagcgcgagagcgagt 161 |||||||||||||||||||| Sbjct: 179089 gagcgagcgcgagagcgagt 179070
>dbj|AP001727.1| Homo sapiens genomic DNA, chromosome 21q, section 71/105 Length = 340000 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gccggcgaccccagcgcgcc 99 |||||||||||||||||||| Sbjct: 185313 gccggcgaccccagcgcgcc 185332
>gb|AC005679.1|F9K20 Arabidopsis thaliana chromosome 1 BAC F9K20 sequence, complete sequence Length = 90425 Score = 40.1 bits (20), Expect = 5.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 266 gaaatcatccgtctcgagggcgattcagccacaatccaag 305 |||||||||||||| || || ||||| ||||| ||||||| Sbjct: 17009 gaaatcatccgtcttgaaggagattctgccaccatccaag 16970
>emb|AL929075.5| Zebrafish DNA sequence from clone CH211-132B9 in linkage group 5, complete sequence Length = 195380 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 tccaagttcacgaggaaaca 319 |||||||||||||||||||| Sbjct: 71594 tccaagttcacgaggaaaca 71575
>dbj|AB004247.1| Citrus unshiu mRNA for H+-ATPase catalytic subunit, complete cds Length = 2304 Score = 40.1 bits (20), Expect = 5.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 152 gagagcgagtacggctacgtccgcaaggtctctggacccgtggt 195 |||||||||||||| || || |||||||| || ||||| ||||| Sbjct: 96 gagagcgagtacggatatgttcgcaaggtatcaggaccagtggt 139
>dbj|AP000704.2| Homo sapiens genomic DNA, chromosome 21q22.2, BAC clone:KB318C2, CBR1-HLCS region Length = 122672 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gccggcgaccccagcgcgcc 99 |||||||||||||||||||| Sbjct: 22510 gccggcgaccccagcgcgcc 22529
>dbj|AP000149.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone D47-S479, segment 1/16, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gccggcgaccccagcgcgcc 99 |||||||||||||||||||| Sbjct: 15783 gccggcgaccccagcgcgcc 15802
>dbj|AP000008.1| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 1/13 Length = 100000 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gccggcgaccccagcgcgcc 99 |||||||||||||||||||| Sbjct: 15783 gccggcgaccccagcgcgcc 15802
>dbj|AP001418.1| Homo sapiens genomic DNA, chromosome 21q22.2, clone:D47, LB7T-ERG region, complete sequence Length = 33910 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gccggcgaccccagcgcgcc 99 |||||||||||||||||||| Sbjct: 15783 gccggcgaccccagcgcgcc 15802 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,536,579 Number of Sequences: 3902068 Number of extensions: 2536579 Number of successful extensions: 49764 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 49329 Number of HSP's gapped (non-prelim): 423 length of query: 437 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 415 effective length of database: 17,147,199,772 effective search space: 7116087905380 effective search space used: 7116087905380 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)