ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast46d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U49482.1|HVU49482 Hordeum vulgare low temperature-responsive ... 176 1e-41
2ref|XM_215595.3| PREDICTED: Rattus norvegicus similar to RIKEN c... 46 0.023
3emb|AL807373.1|NC21D9 Neurospora crassa DNA linkage group V cosm... 42 0.37
4emb|AL451015.1|NCB13O20 Neurospora crassa DNA linkage group V BA... 42 0.37
5gb|AC146718.2| Oryza sativa chromosome 3 B1130H05 genomic seque... 40 1.4
6ref|NM_008390.1| Mus musculus interferon regulatory factor 1 (Ir... 40 1.4
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 1.4
8ref|XM_547147.2| PREDICTED: Canis familiaris similar to Coronin ... 40 1.4
9emb|AL161535.2|ATCHRIV35 Arabidopsis thaliana DNA chromosome 4, ... 40 1.4
10emb|AL049751.1|ATF17N18 Arabidopsis thaliana DNA chromosome 4, B... 40 1.4
11emb|AL596182.28| Mouse DNA sequence from clone RP23-303F24 on ch... 40 1.4
12gb|AC130811.22| Medicago truncatula clone mth2-26b4, complete se... 40 1.4
13dbj|AK152005.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 1.4
14dbj|AK155983.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 1.4
15dbj|AK153514.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 1.4
16dbj|AK152193.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 1.4
17dbj|AK157347.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 1.4
18gb|AC148815.2| Medicago truncatula chromosome 2 BAC clone mth2-1... 40 1.4
19dbj|AK152104.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 1.4
20dbj|AK080949.1| Mus musculus 4 days neonate male adipose cDNA, R... 40 1.4
21dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.4
22dbj|AK119242.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 1.4
23dbj|AK119238.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 1.4
24dbj|AK111046.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 1.4
25dbj|AK070016.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 1.4
26dbj|AK063637.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 1.4
27emb|BX005062.4| Zebrafish DNA sequence from clone CH211-95I5 in ... 40 1.4
28dbj|AK059164.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 1.4
29gb|AF010580.1|AF010580 Oryza sativa glycine-rich protein (OSGRP2... 40 1.4
30gb|AF009411.1|AF009411 Oryza sativa glycine-rich RNA-binding pro... 40 1.4
31gb|AF001894.1|AF001894 Oryza sativa glycine-rich protein mRNA, c... 40 1.4
32gb|M21065.1|MUSIRF1B Mouse interferon regulatory factor 1 mRNA, ... 40 1.4
33gb|M21066.1|MUSIRF1A Mouse interferon regulatory factor 1 gene, ... 40 1.4
34ref|XM_450957.1| Oryza sativa (japonica cultivar-group), mRNA 38 5.7
35gb|BT017073.1| Zea mays clone EL01N0359F10.c mRNA sequence 38 5.7
36gb|BT016348.1| Zea mays clone Contig181 mRNA sequence 38 5.7
37emb|CR926467.10| Zebrafish DNA sequence from clone DKEYP-20G2 in... 38 5.7
38gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate h... 38 5.7
39gb|AC102431.7| Mus musculus chromosome 14, clone RP24-106J1, com... 38 5.7
40gb|AC144477.16| Medicago truncatula clone mth2-6k4, complete seq... 38 5.7
41gb|AC151744.23| Medicago truncatula clone mth2-32k10, complete s... 38 5.7
42gb|AC154570.2| Mus musculus BAC clone RP23-385M5 from chromosome... 38 5.7
43emb|AL355775.1|ATF12M12 Arabidopsis thaliana DNA chromosome 3, B... 38 5.7
44emb|AJ302060.1|OSA302060 Oryza sativa mRNA for glycine rich RNA ... 38 5.7
45gb|AC009379.7| Drosophila melanogaster 3L BAC RP98-48M6 (Roswell... 38 5.7
46gb|AC010563.6| Drosophila melanogaster 3L BAC RP98-9M20 (Roswell... 38 5.7
47gb|AC010565.6| Drosophila melanogaster 3L BAC RP98-19A3 (Roswell... 38 5.7
48gb|BC027741.1| Mus musculus meiotic nuclear divisions 1 homolog ... 38 5.7
49ref|NM_029797.1| Mus musculus meiotic nuclear divisions 1 homolo... 38 5.7
50ref|NM_140328.4| Drosophila melanogaster CG10686-RA (tral), mRNA 38 5.7
51gb|AC010864.11| Homo sapiens chromosome 10 clone RP11-351D16, co... 38 5.7
52gb|AC091980.4| Homo sapiens chromosome 5 clone RP11-546B8, compl... 38 5.7
53ref|XM_695191.1| PREDICTED: Danio rerio similar to stromal antig... 38 5.7
54gb|AY069066.1| Drosophila melanogaster GH08269 full length cDNA 38 5.7
55ref|XM_677925.1| PREDICTED: Danio rerio similar to protein tyros... 38 5.7
56dbj|AK156325.1| Mus musculus activated spleen cDNA, RIKEN full-l... 38 5.7
57gb|AC154875.8| Mus musculus chromosome 3, clone RP23-14O16, comp... 38 5.7
58gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell... 38 5.7
59dbj|AK011664.1| Mus musculus 10 days embryo whole body cDNA, RIK... 38 5.7
60dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.7
61dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.7
62dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.7
63gb|AC008311.3|AC008311 Drosophila melanogaster, chromosome 3R, r... 38 5.7
64gb|AC011615.4|AC011615 Drosophila melanogaster, chromosome 3R, r... 38 5.7
65gb|AC160725.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 38 5.7
66gb|AF529506.1| Acipenser fulvescens clone AfuG125 microsatellite... 38 5.7
67gb|AC102235.10| Mus musculus chromosome 3, clone RP24-97D20, com... 38 5.7
68dbj|AP005105.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.7
69dbj|AP004573.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.7
70emb|AL928838.8| Zebrafish DNA sequence from clone CH211-148F13, ... 38 5.7
71dbj|AP005574.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.7
72dbj|AP005399.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.7
73emb|AL935041.4| Zebrafish DNA sequence from clone CH211-172J16, ... 38 5.7
74emb|AL928990.4| Zebrafish DNA sequence from clone CH211-11F8, co... 38 5.7
75dbj|AP002043.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 38 5.7
76dbj|AK120620.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.7
77dbj|AK071512.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.7
78emb|BX537270.4| Zebrafish DNA sequence from clone DKEY-278E24 in... 38 5.7
79emb|BX510652.6| Zebrafish DNA sequence from clone CH211-107N23 i... 38 5.7
80gb|AE003713.3| Drosophila melanogaster chromosome 3R, section 51... 38 5.7
81gb|AE003544.4| Drosophila melanogaster chromosome 3L, section 41... 38 5.7
82gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44... 38 5.7
83gb|AE003518.3| Drosophila melanogaster chromosome 3L, section 67... 38 5.7
84gb|AE003601.4| Drosophila melanogaster chromosome 3R, section 7 ... 38 5.7
85gb|AC004438.1|AC004438 Drosophila melanogaster DNA sequence (P1 ... 38 5.7
86gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 38 5.7
87emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584... 38 5.7
88emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559... 38 5.7
89gb|AC159985.2| Gallus gallus BAC clone CH261-18F10 from chromoso... 38 5.7
90gb|AC132435.3| Mus musculus BAC clone RP23-223L12 from 10, compl... 38 5.7
91gb|AF034945.1|AF034945 Zea mays glycine-rich RNA binding protein... 38 5.7
92emb|AL691419.10| Mouse DNA sequence from clone RP23-95I4 on chro... 38 5.7 
>gb|U49482.1|HVU49482 Hordeum vulgare low temperature-responsive RNA-binding protein
           (blt801) mRNA, complete cds
          Length = 806

 Score =  176 bits (89), Expect = 1e-41
 Identities = 96/97 (98%), Gaps = 1/97 (1%)
 Strand = Plus / Plus

                                                                       
Query: 28  cactcagtcctcggttcccccggtccggttcggttcggttc-gttagggtttagcggcgg 86
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2   cactcagtcctcggttcccccggtccggttcggttcggttccgttagggtttagcggcgg 61

                                                
Query: 87  ggagaaggatggccgacgtcgagtaccgctgcttcgt 123
           |||||||||||||||||||||||||||||||||||||
Sbjct: 62  ggagaaggatggccgacgtcgagtaccgctgcttcgt 98
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>ref|XM_215595.3| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 2610034E18 gene
           (predicted) (LOC295160), mRNA
          Length = 1290

 Score = 46.1 bits (23), Expect = 0.023
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 17  cttctcctccccactcagtcctc 39
           |||||||||||||||||||||||
Sbjct: 468 cttctcctccccactcagtcctc 446
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>emb|AL807373.1|NC21D9 Neurospora crassa DNA linkage group V cosmid contig 21D9
          Length = 55380

 Score = 42.1 bits (21), Expect = 0.37
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 49    ggtccggttcggttcggttcg 69
             |||||||||||||||||||||
Sbjct: 53830 ggtccggttcggttcggttcg 53850



 Score = 38.2 bits (19), Expect = 5.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 47    ccggtccggttcggttcggttcg 69
             ||||| |||||||||||||||||
Sbjct: 53833 ccggttcggttcggttcggttcg 53855
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>emb|AL451015.1|NCB13O20 Neurospora crassa DNA linkage group V BAC clone B13O20
          Length = 65076

 Score = 42.1 bits (21), Expect = 0.37
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 49    ggtccggttcggttcggttcg 69
             |||||||||||||||||||||
Sbjct: 43013 ggtccggttcggttcggttcg 42993



 Score = 38.2 bits (19), Expect = 5.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 47    ccggtccggttcggttcggttcg 69
             ||||| |||||||||||||||||
Sbjct: 43010 ccggttcggttcggttcggttcg 42988
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>gb|AC146718.2| Oryza sativa chromosome 3  B1130H05 genomic sequence, complete sequence
          Length = 49565

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   gtcgagtaccgctgcttcgt 123
             ||||||||||||||||||||
Sbjct: 16961 gtcgagtaccgctgcttcgt 16942



 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 10    gggttggcttctcctcccc 28
             |||||||||||||||||||
Sbjct: 17055 gggttggcttctcctcccc 17037
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>ref|NM_008390.1| Mus musculus interferon regulatory factor 1 (Irf1), mRNA
          Length = 2072

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 46 cccggtccggttcggttcggttcg 69
          |||||| |||||||||||||||||
Sbjct: 57 cccggttcggttcggttcggttcg 34
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 104      gtcgagtaccgctgcttcgt 123
                ||||||||||||||||||||
Sbjct: 26168865 gtcgagtaccgctgcttcgt 26168884



 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 10       gggttggcttctcctcccc 28
                |||||||||||||||||||
Sbjct: 26168771 gggttggcttctcctcccc 26168789
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>ref|XM_547147.2| PREDICTED: Canis familiaris similar to Coronin 7 (70 kDa WD-repeat
            tumor rejection antigen homolog) (LOC490027), mRNA
          Length = 3093

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 15   ggcttctcctccccactcag 34
            ||||||||||||||||||||
Sbjct: 1477 ggcttctcctccccactcag 1496
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>emb|AL161535.2|ATCHRIV35 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 35
          Length = 199280

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     cggtccggttcggttcggtt 67
              ||||||||||||||||||||
Sbjct: 127737 cggtccggttcggttcggtt 127756
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>emb|AL049751.1|ATF17N18 Arabidopsis thaliana DNA chromosome 4, BAC clone F17N18 (ESSA
            project)
          Length = 86377

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 48   cggtccggttcggttcggtt 67
            ||||||||||||||||||||
Sbjct: 3852 cggtccggttcggttcggtt 3871
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>emb|AL596182.28| Mouse DNA sequence from clone RP23-303F24 on chromosome 11 Contains a
             pseudogene similar to part of glyceraldehyde-3-phosphate
             dehydrogenase (Gapd), the Irf1 gene for interferon
             regulatory factor 1, a novel gene, the Slc22a5 gene for
             solute carrier family 22 (organic cation transporter)
             member 5, a ribosomal protein L27a (Rpl27a) pseudogene, a
             cyclin-dependent kinase 4 (Cdk4) pseudogene and two CpG
             islands, complete sequence
          Length = 191494

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 46    cccggtccggttcggttcggttcg 69
             |||||| |||||||||||||||||
Sbjct: 38062 cccggttcggttcggttcggttcg 38039
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>gb|AC130811.22| Medicago truncatula clone mth2-26b4, complete sequence
          Length = 139970

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    gttcggttcggttcgttagg 74
             ||||||||||||||||||||
Sbjct: 18781 gttcggttcggttcgttagg 18762
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>dbj|AK152005.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
          enriched library, clone:I830045A10 product:interferon
          regulatory factor 1, full insert sequence
          Length = 2097

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 46 cccggtccggttcggttcggttcg 69
          |||||| |||||||||||||||||
Sbjct: 85 cccggttcggttcggttcggttcg 62
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>dbj|AK155983.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
          library, clone:F830003A05 product:interferon regulatory
          factor 1, full insert sequence
          Length = 2097

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 46 cccggtccggttcggttcggttcg 69
          |||||| |||||||||||||||||
Sbjct: 85 cccggttcggttcggttcggttcg 62
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>dbj|AK153514.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
          enriched library, clone:I830169H11 product:interferon
          regulatory factor 1, full insert sequence
          Length = 2092

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 46 cccggtccggttcggttcggttcg 69
          |||||| |||||||||||||||||
Sbjct: 85 cccggttcggttcggttcggttcg 62
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>dbj|AK152193.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
          enriched library, clone:I830054H14 product:interferon
          regulatory factor 1, full insert sequence
          Length = 2092

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 46 cccggtccggttcggttcggttcg 69
          |||||| |||||||||||||||||
Sbjct: 85 cccggttcggttcggttcggttcg 62
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>dbj|AK157347.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
          library, clone:F830212B19 product:interferon regulatory
          factor 1, full insert sequence
          Length = 2096

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 46 cccggtccggttcggttcggttcg 69
          |||||| |||||||||||||||||
Sbjct: 85 cccggttcggttcggttcggttcg 62
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>gb|AC148815.2| Medicago truncatula chromosome 2 BAC clone mth2-13k15, complete sequence
          Length = 126191

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     gttcggttcggttcgttagg 74
              ||||||||||||||||||||
Sbjct: 114815 gttcggttcggttcgttagg 114796
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>dbj|AK152104.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
          enriched library, clone:I830047K22 product:interferon
          regulatory factor 1, full insert sequence
          Length = 2097

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 46 cccggtccggttcggttcggttcg 69
          |||||| |||||||||||||||||
Sbjct: 84 cccggttcggttcggttcggttcg 61
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>dbj|AK080949.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length
          enriched library, clone:B430217B02 product:interferon
          regulatory factor 1, full insert sequence
          Length = 3074

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 46 cccggtccggttcggttcggttcg 69
          |||||| |||||||||||||||||
Sbjct: 85 cccggttcggttcggttcggttcg 62
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 104      gtcgagtaccgctgcttcgt 123
                ||||||||||||||||||||
Sbjct: 26260174 gtcgagtaccgctgcttcgt 26260193



 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 10       gggttggcttctcctcccc 28
                |||||||||||||||||||
Sbjct: 26260080 gggttggcttctcctcccc 26260098
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>dbj|AK119242.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-B02, full
           insert sequence
          Length = 704

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 gtcgagtaccgctgcttcgt 123
           ||||||||||||||||||||
Sbjct: 111 gtcgagtaccgctgcttcgt 130



 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 10 gggttggcttctcctcccc 28
          |||||||||||||||||||
Sbjct: 17 gggttggcttctcctcccc 35
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>dbj|AK119238.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-H08, full
           insert sequence
          Length = 746

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 gtcgagtaccgctgcttcgt 123
           ||||||||||||||||||||
Sbjct: 111 gtcgagtaccgctgcttcgt 130



 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 10 gggttggcttctcctcccc 28
          |||||||||||||||||||
Sbjct: 17 gggttggcttctcctcccc 35
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>dbj|AK111046.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-B12, full
           insert sequence
          Length = 930

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 gtcgagtaccgctgcttcgt 123
           ||||||||||||||||||||
Sbjct: 109 gtcgagtaccgctgcttcgt 128



 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 10 gggttggcttctcctcccc 28
          |||||||||||||||||||
Sbjct: 15 gggttggcttctcctcccc 33
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>dbj|AK070016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037K17, full
           insert sequence
          Length = 854

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 gtcgagtaccgctgcttcgt 123
           ||||||||||||||||||||
Sbjct: 115 gtcgagtaccgctgcttcgt 134



 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 10 gggttggcttctcctcccc 28
          |||||||||||||||||||
Sbjct: 21 gggttggcttctcctcccc 39
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>dbj|AK063637.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-G03, full
           insert sequence
          Length = 601

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 gtcgagtaccgctgcttcgt 123
           ||||||||||||||||||||
Sbjct: 111 gtcgagtaccgctgcttcgt 130



 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 10 gggttggcttctcctcccc 28
          |||||||||||||||||||
Sbjct: 17 gggttggcttctcctcccc 35
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>emb|BX005062.4| Zebrafish DNA sequence from clone CH211-95I5 in linkage group 19,
             complete sequence
          Length = 170213

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    cggttcggttcggttcgtta 72
             ||||||||||||||||||||
Sbjct: 14903 cggttcggttcggttcgtta 14922
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>dbj|AK059164.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-D11, full
           insert sequence
          Length = 779

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 gtcgagtaccgctgcttcgt 123
           ||||||||||||||||||||
Sbjct: 114 gtcgagtaccgctgcttcgt 133



 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 10 gggttggcttctcctcccc 28
          |||||||||||||||||||
Sbjct: 20 gggttggcttctcctcccc 38
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>gb|AF010580.1|AF010580 Oryza sativa glycine-rich protein (OSGRP2) mRNA, complete cds
          Length = 785

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 46 cccggtccggttcggttcggttcg 69
          |||||| |||||||||||||||||
Sbjct: 4  cccggttcggttcggttcggttcg 27
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>gb|AF009411.1|AF009411 Oryza sativa glycine-rich RNA-binding protein mRNA, complete cds
          Length = 821

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 46 cccggtccggttcggttcggttcg 69
          |||||| |||||||||||||||||
Sbjct: 48 cccggttcggttcggttcggttcg 71
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>gb|AF001894.1|AF001894 Oryza sativa glycine-rich protein mRNA, complete cds
          Length = 943

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 46 cccggtccggttcggttcggttcg 69
          |||||| |||||||||||||||||
Sbjct: 29 cccggttcggttcggttcggttcg 52
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>gb|M21065.1|MUSIRF1B Mouse interferon regulatory factor 1 mRNA, complete cds
          Length = 2072

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 46 cccggtccggttcggttcggttcg 69
          |||||| |||||||||||||||||
Sbjct: 57 cccggttcggttcggttcggttcg 34
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>gb|M21066.1|MUSIRF1A Mouse interferon regulatory factor 1 gene, 5' flank
          Length = 524

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 46  cccggtccggttcggttcggttcg 69
           |||||| |||||||||||||||||
Sbjct: 386 cccggttcggttcggttcggttcg 363
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>ref|XM_450957.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1098

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 81  cggcggggagaaggatggc 99
           |||||||||||||||||||
Sbjct: 215 cggcggggagaaggatggc 233
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>gb|BT017073.1| Zea mays clone EL01N0359F10.c mRNA sequence
          Length = 698

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 10 gggttggcttctcctcccc 28
          |||||||||||||||||||
Sbjct: 12 gggttggcttctcctcccc 30
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>gb|BT016348.1| Zea mays clone Contig181 mRNA sequence
          Length = 866

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 10 gggttggcttctcctcccc 28
          |||||||||||||||||||
Sbjct: 9  gggttggcttctcctcccc 27
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>emb|CR926467.10| Zebrafish DNA sequence from clone DKEYP-20G2 in linkage group 5,
             complete sequence
          Length = 153796

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 47    ccggtccggttcggttcggttcg 69
             ||||||||||||||||| |||||
Sbjct: 73978 ccggtccggttcggttctgttcg 74000
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>gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 6
              through 10 and partial cds
          Length = 688489

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 21     tcctccccactcagtcctc 39
              |||||||||||||||||||
Sbjct: 306112 tcctccccactcagtcctc 306130
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>gb|AC102431.7| Mus musculus chromosome 14, clone RP24-106J1, complete sequence
          Length = 157923

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 21   tcctccccactcagtcctc 39
            |||||||||||||||||||
Sbjct: 4912 tcctccccactcagtcctc 4894
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>gb|AC144477.16| Medicago truncatula clone mth2-6k4, complete sequence
          Length = 112241

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 53    cggttcggttcggttcgtt 71
             |||||||||||||||||||
Sbjct: 92645 cggttcggttcggttcgtt 92627
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>gb|AC151744.23| Medicago truncatula clone mth2-32k10, complete sequence
          Length = 110897

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 53     cggttcggttcggttcgtt 71
              |||||||||||||||||||
Sbjct: 103453 cggttcggttcggttcgtt 103471
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>gb|AC154570.2| Mus musculus BAC clone RP23-385M5 from chromosome 14, complete sequence
          Length = 209218

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 21     tcctccccactcagtcctc 39
              |||||||||||||||||||
Sbjct: 203497 tcctccccactcagtcctc 203479
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>emb|AL355775.1|ATF12M12 Arabidopsis thaliana DNA chromosome 3, BAC clone F12M12
          Length = 106730

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 51    tccggttcggttcggttcg 69
             |||||||||||||||||||
Sbjct: 42109 tccggttcggttcggttcg 42091
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>emb|AJ302060.1|OSA302060 Oryza sativa mRNA for glycine rich RNA binding protein (grp5
          gene)
          Length = 888

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 10 gggttggcttctcctcccc 28
          |||||||||||||||||||
Sbjct: 16 gggttggcttctcctcccc 34
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>gb|AC009379.7| Drosophila melanogaster 3L BAC RP98-48M6 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 175963

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                             
Query: 48     cggtccggttcggttcggttcgttagggttt 78
              |||| ||||||||||||||||| | ||||||
Sbjct: 169041 cggttcggttcggttcggttcggttgggttt 169011
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>gb|AC010563.6| Drosophila melanogaster 3L BAC RP98-9M20 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 185497

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                             
Query: 48     cggtccggttcggttcggttcgttagggttt 78
              |||| ||||||||||||||||| | ||||||
Sbjct: 164684 cggttcggttcggttcggttcggttgggttt 164714
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>gb|AC010565.6| Drosophila melanogaster 3L BAC RP98-19A3 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 159928

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 53     cggttcggttcggttcgtt 71
              |||||||||||||||||||
Sbjct: 127848 cggttcggttcggttcgtt 127866
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>gb|BC027741.1| Mus musculus meiotic nuclear divisions 1 homolog (S. cerevisiae),
          mRNA (cDNA clone MGC:29216 IMAGE:5035682), complete cds
          Length = 825

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 21 tcctccccactcagtcctc 39
          |||||||||||||||||||
Sbjct: 81 tcctccccactcagtcctc 63
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>ref|NM_029797.1| Mus musculus meiotic nuclear divisions 1 homolog (S. cerevisiae)
          (Mnd1), mRNA
          Length = 784

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 21 tcctccccactcagtcctc 39
          |||||||||||||||||||
Sbjct: 64 tcctccccactcagtcctc 46
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>ref|NM_140328.4| Drosophila melanogaster CG10686-RA (tral), mRNA
          Length = 3347

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 47   ccggtccggttcggttcggttcg 69
            ||||| |||||||||||||||||
Sbjct: 2778 ccggttcggttcggttcggttcg 2756
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>gb|AC010864.11| Homo sapiens chromosome 10 clone RP11-351D16, complete sequence
          Length = 205794

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    gggttggcttctcctcccc 28
             |||||||||||||||||||
Sbjct: 55628 gggttggcttctcctcccc 55646
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>gb|AC091980.4| Homo sapiens chromosome 5 clone RP11-546B8, complete sequence
          Length = 153133

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 16    gcttctcctccccactcagtcct 38
             ||||| |||||||||||||||||
Sbjct: 55242 gcttcccctccccactcagtcct 55264
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>ref|XM_695191.1| PREDICTED: Danio rerio similar to stromal antigen 2 (LOC571587),
           mRNA
          Length = 1255

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 47  ccggtccggttcggttcggttcg 69
           ||||||||||||||||| |||||
Sbjct: 120 ccggtccggttcggttctgttcg 142
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>gb|AY069066.1| Drosophila melanogaster GH08269 full length cDNA
          Length = 2896

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 47   ccggtccggttcggttcggttcg 69
            ||||| |||||||||||||||||
Sbjct: 2728 ccggttcggttcggttcggttcg 2706
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>ref|XM_677925.1| PREDICTED: Danio rerio similar to protein tyrosine phosphatase,
            receptor type, Q isoform 1 precursor (LOC555426), mRNA
          Length = 6675

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 68   cgttagggtttagcggcgg 86
            |||||||||||||||||||
Sbjct: 1708 cgttagggtttagcggcgg 1690
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>dbj|AK156325.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830016I10 product:GAJ homolog [Homo
            sapiens], full insert sequence
          Length = 2574

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 21   tcctccccactcagtcctc 39
            |||||||||||||||||||
Sbjct: 1864 tcctccccactcagtcctc 1846
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>gb|AC154875.8| Mus musculus chromosome 3, clone RP23-14O16, complete sequence
          Length = 225841

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 21    tcctccccactcagtcctc 39
             |||||||||||||||||||
Sbjct: 32554 tcctccccactcagtcctc 32536
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>gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 170988

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 47    ccggtccggttcggttcggttcg 69
             ||||| |||||||||||||||||
Sbjct: 88313 ccggttcggttcggttcggttcg 88291
to top
>dbj|AK011664.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
          enriched library, clone:2610034E18 product:GAJ homolog
          [Homo sapiens], full insert sequence
          Length = 784

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 21 tcctccccactcagtcctc 39
          |||||||||||||||||||
Sbjct: 64 tcctccccactcagtcctc 46
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 10       gggttggcttctcctcccc 28
                |||||||||||||||||||
Sbjct: 27096385 gggttggcttctcctcccc 27096403
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 81       cggcggggagaaggatggc 99
                |||||||||||||||||||
Sbjct: 17786916 cggcggggagaaggatggc 17786898
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 81       cggcggggagaaggatggc 99
                |||||||||||||||||||
Sbjct: 20312452 cggcggggagaaggatggc 20312434
to top
>gb|AC008311.3|AC008311 Drosophila melanogaster, chromosome 3R, region 83B-83C, BAC clone
              BACR02L23, complete sequence
          Length = 161117

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 53     cggttcggttcggttcgtt 71
              |||||||||||||||||||
Sbjct: 118593 cggttcggttcggttcgtt 118575
to top
>gb|AC011615.4|AC011615 Drosophila melanogaster, chromosome 3R, region 89D-89D, BAC clone
              BACR01H23, complete sequence
          Length = 199653

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 47     ccggtccggttcggttcggttcg 69
              ||||||| |||||||||||||||
Sbjct: 176487 ccggtccagttcggttcggttcg 176509
to top
>gb|AC160725.1| Ornithorhynchus anatinus chromosome UNK clone OABb-130A1, complete
             sequence
          Length = 108108

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 14    tggcttctcctccccactc 32
             |||||||||||||||||||
Sbjct: 52127 tggcttctcctccccactc 52145
to top
>gb|AF529506.1| Acipenser fulvescens clone AfuG125 microsatellite sequence
          Length = 160

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                 
Query: 46 cccggtccggttcggttcggttc 68
          |||||| ||||||||||||||||
Sbjct: 24 cccggttcggttcggttcggttc 2
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>gb|AC102235.10| Mus musculus chromosome 3, clone RP24-97D20, complete sequence
          Length = 183178

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 21     tcctccccactcagtcctc 39
              |||||||||||||||||||
Sbjct: 178252 tcctccccactcagtcctc 178234
to top
>dbj|AP005105.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0052O11
          Length = 106467

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 81    cggcggggagaaggatggc 99
             |||||||||||||||||||
Sbjct: 55063 cggcggggagaaggatggc 55045
to top
>dbj|AP004573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0678G09
          Length = 139220

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 81    cggcggggagaaggatggc 99
             |||||||||||||||||||
Sbjct: 21352 cggcggggagaaggatggc 21334
to top
>emb|AL928838.8| Zebrafish DNA sequence from clone CH211-148F13, complete sequence
          Length = 167563

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 13     ttggcttctcctccccact 31
              |||||||||||||||||||
Sbjct: 116823 ttggcttctcctccccact 116805
to top
>dbj|AP005574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1595_D08
          Length = 116351

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 81    cggcggggagaaggatggc 99
             |||||||||||||||||||
Sbjct: 27560 cggcggggagaaggatggc 27542
to top
>dbj|AP005399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0676H02
          Length = 144252

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 81    cggcggggagaaggatggc 99
             |||||||||||||||||||
Sbjct: 95550 cggcggggagaaggatggc 95532
to top
>emb|AL935041.4| Zebrafish DNA sequence from clone CH211-172J16, complete sequence
          Length = 155853

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 13    ttggcttctcctccccact 31
             |||||||||||||||||||
Sbjct: 76766 ttggcttctcctccccact 76784
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>emb|AL928990.4| Zebrafish DNA sequence from clone CH211-11F8, complete sequence
          Length = 185618

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 68     cgttagggtttagcggcgg 86
              |||||||||||||||||||
Sbjct: 149768 cgttagggtttagcggcgg 149786
to top
>dbj|AP002043.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MJI6
          Length = 83912

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                            
Query: 48    cggtccggttcggttcggttcgttagggttt 78
             |||| |||||||||||||||  |||||||||
Sbjct: 16169 cggttcggttcggttcggtttattagggttt 16139
to top
>dbj|AK120620.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152C09,
          full insert sequence
          Length = 705

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 10 gggttggcttctcctcccc 28
          |||||||||||||||||||
Sbjct: 18 gggttggcttctcctcccc 36
to top
>dbj|AK071512.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098N15, full
            insert sequence
          Length = 1499

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 81   cggcggggagaaggatggc 99
            |||||||||||||||||||
Sbjct: 1100 cggcggggagaaggatggc 1118
to top
>emb|BX537270.4| Zebrafish DNA sequence from clone DKEY-278E24 in linkage group 4,
             complete sequence
          Length = 175518

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                            
Query: 48    cggtccggttcggttcggttcgttagggttt 78
             |||| ||||||||||||||||| || |||||
Sbjct: 70363 cggttcggttcggttcggttcggtacggttt 70333
to top
>emb|BX510652.6| Zebrafish DNA sequence from clone CH211-107N23 in linkage group 4,
             complete sequence
          Length = 165746

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                            
Query: 48    cggtccggttcggttcggttcgttagggttt 78
             |||| ||||||||||||||||| || |||||
Sbjct: 14387 cggttcggttcggttcggttcggtacggttt 14357
to top
>gb|AE003713.3| Drosophila melanogaster chromosome 3R, section 51 of 118 of the complete
              sequence
          Length = 226561

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 47     ccggtccggttcggttcggttcg 69
              ||||||| |||||||||||||||
Sbjct: 174655 ccggtccagttcggttcggttcg 174677
to top
>gb|AE003544.4| Drosophila melanogaster chromosome 3L, section 41 of 83 of the complete
             sequence
          Length = 280378

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 53    cggttcggttcggttcgtt 71
             |||||||||||||||||||
Sbjct: 16651 cggttcggttcggttcgtt 16669
to top
>gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44 of 83 of the complete
              sequence
          Length = 265524

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 47     ccggtccggttcggttcggttcg 69
              ||||| |||||||||||||||||
Sbjct: 208465 ccggttcggttcggttcggttcg 208443
to top
>gb|AE003518.3| Drosophila melanogaster chromosome 3L, section 67 of 83 of the complete
              sequence
          Length = 279088

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                             
Query: 48     cggtccggttcggttcggttcgttagggttt 78
              |||| ||||||||||||||||| | ||||||
Sbjct: 120729 cggttcggttcggttcggttcggttgggttt 120759
to top
>gb|AE003601.4| Drosophila melanogaster chromosome 3R, section 7 of 118 of the complete
             sequence
          Length = 305165

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 53    cggttcggttcggttcgtt 71
             |||||||||||||||||||
Sbjct: 65602 cggttcggttcggttcgtt 65584
to top
>gb|AC004438.1|AC004438 Drosophila melanogaster DNA sequence (P1 DS03786 (D63)), complete
             sequence
          Length = 83340

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 53    cggttcggttcggttcgtt 71
             |||||||||||||||||||
Sbjct: 60747 cggttcggttcggttcgtt 60729
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 10       gggttggcttctcctcccc 28
                |||||||||||||||||||
Sbjct: 27021981 gggttggcttctcctcccc 27021999
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>emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584_D02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 131300

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 10    gggttggcttctcctcccc 28
             |||||||||||||||||||
Sbjct: 59852 gggttggcttctcctcccc 59834
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>emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 145816

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    gggttggcttctcctcccc 28
             |||||||||||||||||||
Sbjct: 35280 gggttggcttctcctcccc 35298
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>gb|AC159985.2| Gallus gallus BAC clone CH261-18F10 from chromosome unknown, complete
              sequence
          Length = 211288

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 47     ccggtccggttcggttcggttcg 69
              ||||||||| |||||||||||||
Sbjct: 178416 ccggtccggctcggttcggttcg 178438
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>gb|AC132435.3| Mus musculus BAC clone RP23-223L12 from 10, complete sequence
          Length = 198383

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 20     ctcctccccactcagtcct 38
              |||||||||||||||||||
Sbjct: 101093 ctcctccccactcagtcct 101111
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>gb|AF034945.1|AF034945 Zea mays glycine-rich RNA binding protein (GRP) mRNA, complete
          cds
          Length = 790

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 10 gggttggcttctcctcccc 28
          |||||||||||||||||||
Sbjct: 8  gggttggcttctcctcccc 26
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>emb|AL691419.10| Mouse DNA sequence from clone RP23-95I4 on chromosome 3, complete
             sequence
          Length = 249405

 Score = 38.2 bits (19), Expect = 5.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 53    cggttcggttcggttcgttaggg 75
             ||||||||||||||||| |||||
Sbjct: 65164 cggttcggttcggttcgctaggg 65186


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 683,325
Number of Sequences: 3902068
Number of extensions: 683325
Number of successful extensions: 54097
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53641
Number of HSP's gapped (non-prelim): 424
length of query: 123
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 102
effective length of database: 17,151,101,840
effective search space: 1749412387680
effective search space used: 1749412387680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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