| Clone Name | bast46d03 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | UCRQ_YEAST (P08525) Ubiquinol-cytochrome c reductase complex ubi... | 28 | 6.8 | 2 | MURE_LEIXX (Q6AE59) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-... | 28 | 6.8 | 3 | GDF11_MOUSE (Q9Z1W4) Growth/differentiation factor 11 precursor ... | 27 | 8.8 |
|---|
>UCRQ_YEAST (P08525) Ubiquinol-cytochrome c reductase complex| ubiquinone-binding protein QP-C (EC 1.10.2.2) (Ubiquinol-cytochrome c reductase complex 11 kDa protein) (Complex III subunit VIII) Length = 94 Score = 27.7 bits (60), Expect = 6.8 Identities = 9/23 (39%), Positives = 13/23 (56%) Frame = -2 Query: 74 YWWVNNPTLGEFCFTMIGRADIE 6 YWW N EF ++ GR ++E Sbjct: 68 YWWKNGNEYNEFLYSKAGREELE 90
>MURE_LEIXX (Q6AE59) UDP-N-acetylmuramoylalanyl-D-glutamate--2,| 6-diaminopimelate ligase (EC 6.3.2.13) (UDP-N-acetylmuramyl-tripeptide synthetase) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-tripeptide synthetase) Length = 514 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = -2 Query: 158 RHRVLGFQPDQ*GKTNLSHDGL 93 RHRV G + D G TNLSHD L Sbjct: 204 RHRVDGIEFDVAGFTNLSHDHL 225
>GDF11_MOUSE (Q9Z1W4) Growth/differentiation factor 11 precursor (GDF-11) (Bone| morphogenetic protein 11) Length = 405 Score = 27.3 bits (59), Expect = 8.8 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = -1 Query: 390 EAAEGRHLASSRTTRSDGDGGESAQRQAVQAP 295 EAAEG A++ + G GGE + R A AP Sbjct: 23 EAAEGPAAAAAAAAAAAGVGGERSSRPAPSAP 54 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,837,416 Number of Sequences: 219361 Number of extensions: 552327 Number of successful extensions: 1226 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1198 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1226 length of database: 80,573,946 effective HSP length: 112 effective length of database: 56,005,514 effective search space used: 1344132336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)