| Clone Name | bast46d01 |
|---|---|
| Clone Library Name | barley_pub |
>CO410_WHEAT (P46524) Dehydrin COR410 (Cold-induced COR410 protein)| Length = 262 Score = 53.1 bits (126), Expect = 3e-07 Identities = 41/105 (39%), Positives = 43/105 (40%), Gaps = 5/105 (4%) Frame = +1 Query: 97 MEDERSTQSYQGAE-ADQVEVTDRXXXXXXXXXXXXXXXXXXXXXXVTGMXXXX----XX 261 MEDERSTQSYQG E A+QVEVTDR VTGM Sbjct: 1 MEDERSTQSYQGGEAAEQVEVTDRGLLGNLLGKKKAEEDKEKEEELVTGMEKVSVEEPEV 60 Query: 262 XXXXXXXXXXXXTLFSKLHRXXXXXXXXXXXXXXXXVIDENGEVI 396 TLFSKLHR VID+NGEVI Sbjct: 61 KKEEHEDGEKKETLFSKLHR-SSSSSSSSSDEEEEEVIDDNGEVI 104
>DIAP2_MOUSE (O70566) Protein diaphanous homolog 2 (Diaphanous-related formin-2)| (DRF2) (mDia3) Length = 1098 Score = 31.2 bits (69), Expect = 1.2 Identities = 12/24 (50%), Positives = 13/24 (54%) Frame = -1 Query: 169 GPCPSPPPDRPQLPGMTGCSSHPP 98 GPCP PPP P P + G PP Sbjct: 556 GPCPPPPPPPPPPPPLPGVVPPPP 579
>DIAP1_HUMAN (O60610) Protein diaphanous homolog 1 (Diaphanous-related formin-1)| (DRF1) Length = 1248 Score = 30.4 bits (67), Expect = 2.1 Identities = 13/23 (56%), Positives = 13/23 (56%) Frame = -1 Query: 166 PCPSPPPDRPQLPGMTGCSSHPP 98 P P PPP P LPG T S PP Sbjct: 601 PPPPPPPPPPPLPGGTAISPPPP 623
>RDRP_IBDV (Q9Q6Q5) RNA-directed RNA polymerase (EC 2.7.7.48) (RDRP) (Protein| VP1) Length = 881 Score = 29.3 bits (64), Expect = 4.6 Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 6/36 (16%) Frame = -2 Query: 93 RDRSVQLK----TRGS*RKQRIS--KDYWFLACGFL 4 R+ S LK T+GS +K+ +S DYW+L+CG L Sbjct: 283 RELSTLLKQGAGTKGSNKKKLLSMLSDYWYLSCGLL 318
>RDRP_IBDVA (P12918) RNA-directed RNA polymerase (EC 2.7.7.48) (RDRP) (Protein| VP1) Length = 878 Score = 29.3 bits (64), Expect = 4.6 Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 6/36 (16%) Frame = -2 Query: 93 RDRSVQLK----TRGS*RKQRIS--KDYWFLACGFL 4 R+ S LK T+GS +K+ +S DYW+L+CG L Sbjct: 282 RELSALLKQGAGTKGSNKKKLLSMLSDYWYLSCGLL 317
>ETBR2_HUMAN (O60883) Endothelin B receptor-like protein 2 precursor (ETBR-LP-2)| (G-protein coupled receptor 37-like 1) Length = 481 Score = 28.9 bits (63), Expect = 6.0 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +2 Query: 47 CFL*LPRVFSCTDRSRSWRMRGAPSHTRELR 139 C+ LP +F+ T + +WR+RG P E R Sbjct: 316 CYFCLPILFTVTCQLVTWRVRGPPGRKSECR 346
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 28.9 bits (63), Expect = 6.0 Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 4/27 (14%) Frame = -1 Query: 166 PCPSPPPD----RPQLPGMTGCSSHPP 98 PCPSPPP P P + C S PP Sbjct: 87 PCPSPPPKPQPKPPPAPSPSPCPSPPP 113
>ETBR2_RAT (Q9QYC5) Endothelin B receptor-like protein 2 precursor (ETBR-LP-2)| (G-protein coupled receptor 37-like 1) (G-protein coupled receptor CNS2) Length = 481 Score = 28.5 bits (62), Expect = 7.9 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +2 Query: 47 CFL*LPRVFSCTDRSRSWRMRGAPSHTRELR 139 C+ LP +F+ T + +WR+RG P E R Sbjct: 316 CYFCLPILFTVTCQLVTWRVRGPPGRKPECR 346
>ETBR2_MOUSE (Q99JG2) Endothelin B receptor-like protein 2 precursor (ETBR-LP-2)| (G-protein coupled receptor 37-like 1) Length = 481 Score = 28.5 bits (62), Expect = 7.9 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +2 Query: 47 CFL*LPRVFSCTDRSRSWRMRGAPSHTRELR 139 C+ LP +F+ T + +WR+RG P E R Sbjct: 316 CYFCLPILFTVTCQLVTWRVRGPPGRKPECR 346
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 28.5 bits (62), Expect = 7.9 Identities = 15/27 (55%), Positives = 15/27 (55%), Gaps = 1/27 (3%) Frame = -1 Query: 166 PCPSPPPDR-PQLPGMTGCSSHPP*SR 89 P P PPP R P PGM G PP SR Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPSR 324 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,175,700 Number of Sequences: 219361 Number of extensions: 444216 Number of successful extensions: 2513 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1926 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2449 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)